RLG00000034239

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
39145958 .. 39150679
4722 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034239

Sequence Viewer

Length: 2490 bp
ATGGCAGCTGCAAGCACAACGATAATCCCAGTGAACGTGGGAGTTGTTGTAGACCTTGATGGACCGAGTGGGAAAATGTACTTGAGTTGCATCGAAATGGCGCTCTCGGATTTCTATGCTATCCATGCTGACTACAAGACTAGGCTCGTTTTGAACACCAGGAACTCCAATAGAGATGTGGTTGGAGCAGCTGCCGCAGCTTTGGATCTGATAAAGAATGTAGAAGTGAAAGCAATCCTAGGACCAATGACATCAATGCAGGCAACTTTCGTTGTTAATCTTGGAGAAAAAGCTCAAGTGCCAATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCAGAGCTCCTACTTTTTCCAATTTGCCCAAAATGACTCAACCCAAGTGAAAGCCATAAGTGGTATTGTTCAAAACTTTGGATGGAGGCGAGTTATCCCCATTTACGTAGACAATATGTACGGGGAGGGAATCATGCCTTTTCTAGTTGATGCCTTGCTCGAGGTTGATGCTCATGTCCCATATCGAAGTGTAATTTCACAGTCCGCCACCGATGATCAAATTGGGATCGAACTTTACAAGTTAATGACAATGCAGACTAGAGTCTTCATAGTGCATATGATGCCAAAACTTGCATCACAGTTTTTTGCCAAGGCGAAAGAGATTGGAATGATGAACAAGGGTTTTGTATGGATCACAACCAATGGGGTTGGAGATCGTTTAAAGGCAATGGAATCTGTTCTGAATTCAATGCAAGGAGTCTTAAGTGTGGAAAATGATATTTCAGACACATTTAAGCTTAGAGAATTCAAAACAAGGTGGAAAAGGCAATTCCAACAAGAAAATCCAGAAATCATTGATGTTGAGTTGGATGCTTTTGGATATCGGGCTTATGATGCGGCTTTTGCAATAGCCATGGCAGTTGAAAAAGTTGGGAATGCAAGCTTTGGATCTCAAAAGGGAAATGCTTCATCTTTCAACTCTACAGATCTTGGAAGTTTAAAGGTCTCTCAATATGGTTCAAACATTTCTAATGCCTTATCACTCATGAGTTTTAGAGGCTTGGTTGGCAATTTTAGTCTTGTTGATAGGCAACTTCAACTATCGACTTTTAAGATTGTTAATGTCAATGGTAATGGAGGAAGAGGAAGAGCAGTTGGGTATTGGACACCGGAAAATGGAAGGTTAGTGAATTCAACAAATAGTTGTAATGTTTCAGCTTTCAAGTGTGATGCTCTTGGACCCATTATATGGCCGGGAGAGTCATTATCCGTTCCCAAAGGATGGCAGATCCCGGAAAATGGTACGAAGTTAAGAATTGGAGTTCCAGTGAGGGATGGTTTTTCAGAATTTGTTAAAGTAACACCAAATTTGAGAACTAATACTAGTGATGTCACTGGGTTCAGTATTGATGTGTTTAAGGCTGCAGTGGACCTGTTACCATATGCACTTCCTTATGAATTGATTCCCTATGCATATCCTAATGGCAGCAGTGCTGGCACGTATAATGATTTAATCTATCAAGTATACCTTGGGAGAGTGGTTAGCAACTTGGGAAGATTTGTGATGATTATATGGGTATTTGTTGTGCTGATAGTGACACAAAGCTACACTGCTAATCTAGCATCACTATTAACTGTTCAACAACTCCGACCAGCTGTTAACGATTTAAATGATCTTTTAAGGAATGGAGAAAAAGTTGGCTACATGAAGAATGCTTTTGTATATGATCTCTTGATACAAAGAGGTTTTGATGATTCCAAGCTCAAGGCTTGTGGATCTATGGAAGAAATAGATGACGCTCTTTCAAAAGGGAGTGCAAATGGTGGTATTGCTGCAATTGTTCATGAAACCCCCTACATGAAGCTACTCGTTGCAAAATATTGTTCAAAGTATACTATGATTGGACCAATATTTAAAACCGATGGCTTTGGCTTCGCATTTCCAAAACGTTCCCCTCTTGTATATGAAATTACACAAGCAATCCTAAATTTGACAGATGATGGATTGATGGGAATGCTTGAAGATAAATGGATCAAGAAAGATAGTAACTGTAAAAACTCTACTGGGAACTTTTCTAGCACTGCTCTTGGCCTTGAGAGCTTTTGGGGTCTTTTTTTAATTGCAGGGATAGCTTCAATATTTGCTCTAATCACATCTGTAACTTCCTTCTTGTATGAGCATAAGCATGTCTTGATGCCCTCGGATTCAGGCACCTCGAAGTGGAAAAGGATCAGAGCCATGTTCGAGATCTTTAACAAAAAAGAACTTAGCTCTCATACTTTTAGAACCAGTCGACATACAGACAGTTATACTGGTACTCAACATCATGAAGTGAAAGGGTCATCACCAAATAACAACTGGCCAGAGAGTCCACAAAGTTGTATCAACCATGCAGATACAGTTTCTGTATCCTCTCGTGGGCAAGCATCTCTAGAAACCAACCCAACTTTGGAGCTTGCCATCACTGTTCAAGAAACACACTAA

Protein Analysis

830

Amino Acids

91.18

Weight (kDa)

7.18

Isoelectric Point (pI)

29.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 10 - 314 2.4e-22 Periplasmic binding protein
ANF_receptor PF01094 30 - 380 3.3e-76 Receptor family ligand binding region
Lig_chan PF00060 514 - 713 4.3e-22 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2216
AccB7I CCANNNNNTGG 2 cut(s) 1254, 1287
AccI GTMKAC 5 cut(s) 51, 453, 1530, 1898, 2299
AciI CCGC 3 cut(s) 195, 549, 902
AclI AACGTT 1 cut(s) 1954
AclWI GGATC 8 cut(s) 213, 578, 704, 961, 1288, 1789, 2045, 2243
AcoI YGGCCR 2 cut(s) 1256, 2366
AcsI RAATTY 6 cut(s) 748, 809, 1195, 1352, 1372, 1993
AcuI CTGAAG 1 cut(s) 329
AfaI GTAC 4 cut(s) 80, 464, 1309, 2323
AfiI CCNNNNNNNGG 7 cut(s) 1181, 1254, 1287, 1304, 2226, 2424, 2455
AflII CTTAAG 1 cut(s) 766
AhlI ACTAGT 1 cut(s) 1388
AjnI CCWGG 1 cut(s) 158
Alw21I GWGCWC 1 cut(s) 353
Alw26I GTCTC 1 cut(s) 1015
AlwI GGATC 8 cut(s) 213, 578, 704, 961, 1288, 1789, 2045, 2243
AlwNI CAGNNNCTG 1 cut(s) 2411
Ama87I CYCGRG 1 cut(s) 503
AoxI GGCC 3 cut(s) 1256, 2095, 2366
ApeKI GCWGC 8 cut(s) 5, 8, 188, 191, 197, 1427, 1491, 1838
ApoI RAATTY 6 cut(s) 748, 809, 1195, 1352, 1372, 1993
Asp700I GAANNNNTTC 3 cut(s) 741, 970, 1467
AspA2I CCTAGG 1 cut(s) 238
AspLEI GCGC 1 cut(s) 103
AspS9I GGNCC 5 cut(s) 62, 242, 1244, 1435, 1910
AsuC2I CCSGG 2 cut(s) 1260, 1298
AsuHPI GGTGA 1 cut(s) 2343
AvaI CYCGRG 1 cut(s) 503
AvaII GGWCC 5 cut(s) 62, 242, 1244, 1435, 1910
AvrII CCTAGG 1 cut(s) 238
BalI TGGCCA 1 cut(s) 2368
BanI GGYRCC 1 cut(s) 2216
BanII GRGCYC 1 cut(s) 353
BauI CACGAG 1 cut(s) 2421
BbsI GAAGAC 1 cut(s) 601
Bbv12I GWGCWC 1 cut(s) 353
BbvI GCAGC 7 cut(s) 17, 178, 200, 209, 1414, 1503, 1825
BccI CCATC 8 cut(s) 53, 420, 1281, 1334, 1922, 2000, 2008, 2474
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BciT130I CCWGG 1 cut(s) 160
BciVI GTATCC 1 cut(s) 2425
BclI TGATCA 1 cut(s) 559
BcnI CCSGG 2 cut(s) 1260, 1298
BcoDI GTCTC 1 cut(s) 1015
BcuI ACTAGT 1 cut(s) 1388
BfaI CTAG 8 cut(s) 141, 239, 488, 603, 1389, 1625, 2082, 2438
BfmI CTRYAG 2 cut(s) 987, 1428
BfoI RGCGCY 1 cut(s) 104
BfrI CTTAAG 1 cut(s) 766
BfuI GTATCC 1 cut(s) 2425
BglII AGATCT 2 cut(s) 991, 2253
BlnI CCTAGG 1 cut(s) 238
Bme1390I CCNGG 3 cut(s) 160, 1260, 1298
Bme18I GGWCC 5 cut(s) 62, 242, 1244, 1435, 1910
BmeT110I CYCGRG 1 cut(s) 503
BmgT120I GGNCC 5 cut(s) 62, 242, 1244, 1435, 1910
BmiI GGNNCC 2 cut(s) 1246, 2218
BmrFI CCNGG 3 cut(s) 160, 1260, 1298
BmrI ACTGGG 3 cut(s) 23, 1410, 2079
BmuI ACTGGG 3 cut(s) 23, 1410, 2079
BoxI GACNNNNGTC 1 cut(s) 605
BpiI GAAGAC 1 cut(s) 601
BpuEI CTTGAG 4 cut(s) 103, 279, 1754, 2120
BpuMI CCSGG 2 cut(s) 1260, 1298
BsaAI YACGTR 2 cut(s) 451, 1506
BsaI GGTCTC 1 cut(s) 1015
BsaJI CCNNGG 5 cut(s) 238, 654, 918, 1534, 2205
BsaWI WCCGGW 1 cut(s) 1174
BsaXI ACNNNNNCTCC 6 cut(s) 33, 63, 1317, 1347, 1686, 1716
Bsc4I CCNNNNNNNGG 7 cut(s) 1181, 1254, 1287, 1304, 2226, 2424, 2455
Bse1I ACTGG 7 cut(s) 29, 1331, 1405, 2074, 2295, 2323, 2369
Bse3DI GCAATG 1 cut(s) 738
BseBI CCWGG 1 cut(s) 160
BseDI CCNNGG 5 cut(s) 238, 654, 918, 1534, 2205
BseGI GGATG 4 cut(s) 431, 880, 1292, 1345
BseLI CCNNNNNNNGG 7 cut(s) 1181, 1254, 1287, 1304, 2226, 2424, 2455
BseMI GCAATG 1 cut(s) 738
BseNI ACTGG 7 cut(s) 29, 1331, 1405, 2074, 2295, 2323, 2369
BseXI GCAGC 7 cut(s) 17, 178, 200, 209, 1414, 1503, 1825
BshFI GGCC 3 cut(s) 1258, 2097, 2368
BshNI GGYRCC 1 cut(s) 2216
BsiHKAI GWGCWC 1 cut(s) 353
BsiHKCI CYCGRG 1 cut(s) 503
BsiSI CCGG 3 cut(s) 1175, 1259, 1298
BslFI GGGAC 1 cut(s) 506
BslI CCNNNNNNNGG 7 cut(s) 1181, 1254, 1287, 1304, 2226, 2424, 2455
BsmAI GTCTC 1 cut(s) 1015
BsmFI GGGAC 1 cut(s) 506
BsmI GAATGC 3 cut(s) 946, 1723, 2025
BsnI GGCC 3 cut(s) 1258, 2097, 2368
Bso31I GGTCTC 1 cut(s) 1015
BsoBI CYCGRG 1 cut(s) 503
Bsp1286I GDGCHC 1 cut(s) 353
Bsp19I CCATGG 1 cut(s) 918
BspACI CCGC 3 cut(s) 195, 549, 902
BspANI GGCC 3 cut(s) 1258, 2097, 2368
BspHI TCATGA 3 cut(s) 1050, 1849, 2332
BspLI GGNNCC 2 cut(s) 1246, 2218
BspMAI CTGCAG 1 cut(s) 1432
BspPI GGATC 8 cut(s) 213, 578, 704, 961, 1288, 1789, 2045, 2243
BspQI GCTCTTC 1 cut(s) 1147
BspT107I GGYRCC 1 cut(s) 2216
BspTI CTTAAG 1 cut(s) 766
BspTNI GGTCTC 1 cut(s) 1015
BsrDI GCAATG 1 cut(s) 738
BsrI ACTGG 7 cut(s) 29, 1331, 1405, 2074, 2295, 2323, 2369
BssECI CCNNGG 5 cut(s) 238, 654, 918, 1534, 2205
BssNAI GTATAC 2 cut(s) 1531, 1899
BssSI CACGAG 1 cut(s) 2421
BssT1I CCWWGG 4 cut(s) 238, 654, 918, 1534
Bst1107I GTATAC 2 cut(s) 1531, 1899
Bst2BI CACGAG 1 cut(s) 2421
Bst2UI CCWGG 1 cut(s) 160
Bst4CI ACNGT 7 cut(s) 546, 645, 1642, 2057, 2312, 2407, 2473
Bst6I CTCTTC 2 cut(s) 1141, 1147
BstAFI CTTAAG 1 cut(s) 766
BstAPI GCANNNNNTGC 1 cut(s) 625
BstBAI YACGTR 2 cut(s) 451, 1506
BstC8I GCNNGC 6 cut(s) 13, 261, 946, 1501, 2430, 2463
BstDEI CTNAG 2 cut(s) 803, 2273
BstDSI CCRYGG 1 cut(s) 918
BstF5I GGATG 4 cut(s) 431, 880, 1292, 1345
BstH2I RGCGCY 1 cut(s) 104
BstHHI GCGC 1 cut(s) 103
BstMAI GTCTC 1 cut(s) 1015
BstNI CCWGG 1 cut(s) 160
BstNSI RCATGY 1 cut(s) 2195
BstPAI GACNNNNGTC 1 cut(s) 605
BstSCI CCNGG 3 cut(s) 158, 1258, 1296
BstSFI CTRYAG 2 cut(s) 987, 1428
BstSNI TACGTA 1 cut(s) 451
BstV1I GCAGC 7 cut(s) 17, 178, 200, 209, 1414, 1503, 1825
BstV2I GAAGAC 1 cut(s) 601
BstX2I RGATCY 6 cut(s) 205, 953, 991, 1293, 1781, 2253
BstYI RGATCY 6 cut(s) 205, 953, 991, 1293, 1781, 2253
BstZ17I GTATAC 2 cut(s) 1531, 1899
BsuI GTATCC 1 cut(s) 2425
BsuRI GGCC 3 cut(s) 1258, 2097, 2368
BtgI CCRYGG 1 cut(s) 918
BtsCI GGATG 4 cut(s) 431, 880, 1292, 1345
BtsI GCAGTG 4 cut(s) 1437, 1501, 1614, 2085
BtsIMutI CAGTG 8 cut(s) 36, 1338, 1398, 1437, 1501, 1614, 2085, 2469
Cac8I GCNNGC 6 cut(s) 13, 261, 946, 1501, 2430, 2463
CaiI CAGNNNCTG 1 cut(s) 2411
CciI TCATGA 3 cut(s) 1050, 1849, 2332
CfoI GCGC 1 cut(s) 103
Cfr13I GGNCC 5 cut(s) 62, 242, 1244, 1435, 1910
CseI GACGC 1 cut(s) 1811
Csp6I GTAC 4 cut(s) 79, 463, 1308, 2322
CspCI CAANNNNNGTGG 2 cut(s) 1759, 1794
CviQI GTAC 4 cut(s) 79, 463, 1308, 2322
DdeI CTNAG 2 cut(s) 803, 2273
DraI TTTAAA 4 cut(s) 726, 1005, 1674, 1921
EaeI YGGCCR 2 cut(s) 1256, 2366
Eam1104I CTCTTC 2 cut(s) 1141, 1147
EarI CTCTTC 2 cut(s) 1141, 1147
EciI GGCGGA 1 cut(s) 538
Ecl136II GAGCTC 1 cut(s) 351
Eco105I TACGTA 1 cut(s) 451
Eco130I CCWWGG 4 cut(s) 238, 654, 918, 1534
Eco24I GRGCYC 1 cut(s) 353
Eco31I GGTCTC 1 cut(s) 1015
Eco32I GATATC 1 cut(s) 887
Eco47I GGWCC 5 cut(s) 62, 242, 1244, 1435, 1910
Eco53kI GAGCTC 1 cut(s) 351
Eco57I CTGAAG 1 cut(s) 329
Eco88I CYCGRG 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 351
EcoRI GAATTC 3 cut(s) 748, 809, 1195
EcoRII CCWGG 1 cut(s) 158
EcoRV GATATC 1 cut(s) 887
EcoT14I CCWWGG 4 cut(s) 238, 654, 918, 1534
EcoT22I ATGCAT 1 cut(s) 1480
EcoT38I GRGCYC 1 cut(s) 353
ErhI CCWWGG 4 cut(s) 238, 654, 918, 1534
FalI AAGNNNNNCTT 4 cut(s) 1518, 1550, 2180, 2212
FaqI GGGAC 1 cut(s) 506
FauNDI CATATG 2 cut(s) 621, 1447
FbaI TGATCA 1 cut(s) 559
FblI GTMKAC 5 cut(s) 51, 453, 1530, 1898, 2299
FokI GGATG 4 cut(s) 438, 887, 1299, 1352
FriOI GRGCYC 1 cut(s) 353
FspBI CTAG 8 cut(s) 141, 239, 488, 603, 1389, 1625, 2082, 2438
GlaI GCGC 1 cut(s) 102
HaeII RGCGCY 1 cut(s) 104
HaeIII GGCC 3 cut(s) 1258, 2097, 2368
HapII CCGG 3 cut(s) 1175, 1259, 1298
HgaI GACGC 1 cut(s) 1811
HhaI GCGC 1 cut(s) 103
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HincII GTYRAC 2 cut(s) 1666, 2300
HindII GTYRAC 2 cut(s) 1666, 2300
HindIII AAGCTT 2 cut(s) 800, 946
HpaI GTTAAC 1 cut(s) 1666
HpaII CCGG 3 cut(s) 1175, 1259, 1298
HphI GGTGA 1 cut(s) 2343
Hpy166II GTNNAC 9 cut(s) 34, 52, 454, 1435, 1531, 1666, 1899, 2300, 2378
Hpy188I TCNGA 9 cut(s) 109, 210, 348, 747, 790, 1351, 1655, 2209, 2240
Hpy8I GTNNAC 9 cut(s) 34, 52, 454, 1435, 1531, 1666, 1899, 2300, 2378
HpyAV CCTTC 3 cut(s) 339, 1179, 2182
HpyCH4III ACNGT 7 cut(s) 546, 645, 1642, 2057, 2312, 2407, 2473
HpyCH4IV ACGT 4 cut(s) 36, 450, 1505, 1954
HpyF3I CTNAG 2 cut(s) 803, 2273
HpySE526I ACGT 4 cut(s) 36, 450, 1505, 1954
HspAI GCGC 1 cut(s) 101
Ksp22I TGATCA 1 cut(s) 559
KspAI GTTAAC 1 cut(s) 1666
LguI GCTCTTC 1 cut(s) 1147
LmnI GCTCC 3 cut(s) 185, 356, 2458
Lsp1109I GCAGC 7 cut(s) 17, 178, 200, 209, 1414, 1503, 1825
MaeI CTAG 8 cut(s) 141, 239, 488, 603, 1389, 1625, 2082, 2438
MaeII ACGT 4 cut(s) 36, 450, 1505, 1954
MaeIII GTNAC 6 cut(s) 1363, 1396, 1440, 1600, 2051, 2164
MboII GAAGA 7 cut(s) 601, 1158, 1164, 1572, 1726, 1802, 2039
MfeI CAATTG 1 cut(s) 1842
MflI RGATCY 6 cut(s) 205, 953, 991, 1293, 1781, 2253
MhlI GDGCHC 1 cut(s) 353
MlsI TGGCCA 1 cut(s) 2368
MluNI TGGCCA 1 cut(s) 2368
MlyI GAGTC 5 cut(s) 374, 615, 771, 1274, 2383
MmeI TCCRAC 5 cut(s) 163, 694, 852, 862, 1678
Mox20I TGGCCA 1 cut(s) 2368
Mph1103I ATGCAT 1 cut(s) 1480
MroXI GAANNNNTTC 3 cut(s) 741, 970, 1467
MscI TGGCCA 1 cut(s) 2368
MslI CAYNNNNRTG 2 cut(s) 95, 2190
Msp20I TGGCCA 1 cut(s) 2368
MspA1I CMGCKG 3 cut(s) 8, 191, 1661
MspCI CTTAAG 1 cut(s) 766
MspI CCGG 3 cut(s) 1175, 1259, 1298
MspR9I CCNGG 3 cut(s) 160, 1260, 1298
MunI CAATTG 1 cut(s) 1842
Mva1269I GAATGC 3 cut(s) 946, 1723, 2025
MvaI CCWGG 1 cut(s) 160
NciI CCSGG 2 cut(s) 1260, 1298
NcoI CCATGG 1 cut(s) 918
NdeI CATATG 2 cut(s) 621, 1447
NlaIV GGNNCC 2 cut(s) 1246, 2218
NmuCI GTSAC 2 cut(s) 1396, 1600
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 1 cut(s) 2195
PaeR7I CTCGAG 1 cut(s) 503
PagI TCATGA 3 cut(s) 1050, 1849, 2332
PciSI GCTCTTC 1 cut(s) 1147
PctI GAATGC 3 cut(s) 946, 1723, 2025
PdmI GAANNNNTTC 3 cut(s) 741, 970, 1467
PfeI GAWTC 5 cut(s) 474, 737, 1468, 1760, 2210
PflMI CCANNNNNTGG 2 cut(s) 1254, 1287
PfoI TCCNGGA 1 cut(s) 1296
PleI GAGTC 5 cut(s) 374, 614, 770, 1273, 2382
PpsI GAGTC 5 cut(s) 374, 614, 770, 1273, 2382
Ppu21I YACGTR 2 cut(s) 451, 1506
PshAI GACNNNNGTC 1 cut(s) 605
Psp124BI GAGCTC 1 cut(s) 353
Psp1406I AACGTT 1 cut(s) 1954
Psp6I CCWGG 1 cut(s) 158
PspGI CCWGG 1 cut(s) 158
PspN4I GGNNCC 2 cut(s) 1246, 2218
PspPI GGNCC 5 cut(s) 62, 242, 1244, 1435, 1910
PspXI VCTCGAGB 1 cut(s) 503
PstI CTGCAG 1 cut(s) 1432
PstNI CAGNNNCTG 1 cut(s) 2411
PsuI RGATCY 6 cut(s) 205, 953, 991, 1293, 1781, 2253
PvuII CAGCTG 3 cut(s) 8, 191, 1661
RsaI GTAC 4 cut(s) 80, 464, 1309, 2323
RsaNI GTAC 4 cut(s) 79, 463, 1308, 2322
RseI CAYNNNNRTG 2 cut(s) 95, 2190
SacI GAGCTC 1 cut(s) 353
SalI GTCGAC 1 cut(s) 2298
SapI GCTCTTC 1 cut(s) 1147
Sau96I GGNCC 5 cut(s) 62, 242, 1244, 1435, 1910
SchI GAGTC 5 cut(s) 374, 615, 771, 1274, 2383
ScrFI CCNGG 3 cut(s) 160, 1260, 1298
SduI GDGCHC 1 cut(s) 353
SfcI CTRYAG 2 cut(s) 987, 1428
Sfr274I CTCGAG 1 cut(s) 503
SinI GGWCC 5 cut(s) 62, 242, 1244, 1435, 1910
SlaI CTCGAG 1 cut(s) 503
SmiI ATTTAAAT 1 cut(s) 1674
SmiMI CAYNNNNRTG 2 cut(s) 95, 2190
SmlI CTYRAG 6 cut(s) 82, 294, 503, 766, 1769, 2099
SmoI CTYRAG 6 cut(s) 82, 294, 503, 766, 1769, 2099
SnaBI TACGTA 1 cut(s) 451
SpeI ACTAGT 1 cut(s) 1388
SsiI CCGC 3 cut(s) 195, 549, 902
SspI AATATT 3 cut(s) 1886, 1917, 2145
SspMI CTAG 8 cut(s) 141, 239, 488, 603, 1389, 1625, 2082, 2438
SstI GAGCTC 1 cut(s) 353
StyD4I CCNGG 3 cut(s) 158, 1258, 1296
StyI CCWWGG 4 cut(s) 238, 654, 918, 1534
SwaI ATTTAAAT 1 cut(s) 1674
TaaI ACNGT 7 cut(s) 546, 645, 1642, 2057, 2312, 2407, 2473
TaiI ACGT 4 cut(s) 39, 453, 1508, 1957
TaqI TCGA 8 cut(s) 93, 504, 529, 573, 1109, 2222, 2250, 2299
TaqII GACCGA 1 cut(s) 79
TatI WGTACW 1 cut(s) 78
TauI GCSGC 2 cut(s) 197, 905
TfiI GAWTC 5 cut(s) 474, 737, 1468, 1760, 2210
TscAI CASTG 8 cut(s) 36, 1338, 1405, 1437, 1501, 1621, 2092, 2476
TseFI GTSAC 2 cut(s) 1396, 1600
TseI GCWGC 8 cut(s) 5, 8, 188, 191, 197, 1427, 1491, 1838
Tsp45I GTSAC 2 cut(s) 1396, 1600
TspGWI ACGGA 1 cut(s) 1264
TspRI CASTG 8 cut(s) 36, 1338, 1405, 1437, 1501, 1621, 2092, 2476
Van91I CCANNNNNTGG 2 cut(s) 1254, 1287
Vha464I CTTAAG 1 cut(s) 766
VpaK11BI GGWCC 5 cut(s) 62, 242, 1244, 1435, 1910
XapI RAATTY 6 cut(s) 748, 809, 1195, 1352, 1372, 1993
XbaI TCTAGA 1 cut(s) 2437
XceI RCATGY 1 cut(s) 2195
XcmI CCANNNNNNNNNTGG 3 cut(s) 175, 2361, 2452
XhoI CTCGAG 1 cut(s) 503
XmaJI CCTAGG 1 cut(s) 238
XmiI GTMKAC 5 cut(s) 51, 453, 1530, 1898, 2299
XmnI GAANNNNTTC 3 cut(s) 741, 970, 1467
XspI CTAG 8 cut(s) 141, 239, 488, 603, 1389, 1625, 2082, 2438
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.