Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

27231402 .. 27236012

Gene Structure 4611 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G014670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2853 bp

ATGATCAAGAAGAAAAATCATACCTTTCTCTTCTCATTGATTTTTCTGGCCATGATTAATGCACAAAATACAACAATCCCAGTGAATGTTGGTGTTGTTCTTGACTTTGATTCAGGGGGCGGGAAGACTGCAAAGGTGTACTTGAGTTGCATAGAAATGGCCCTCTCAGATATTTATGCATCTCATCCTTACTTCAAGACGAGGATAGTATTGAACACAAGGAACTCCAAACAAACTGTTGTTGGTGCAGCTGCGGCAGCTCTGGATCTGATAAAGAATGCAGAAGTTCTAGCAATATTAGGGCCTGAAACATCAATGCAGGCGAGCTTCATTGTTAATTTGGGAGACGAAGCTCATGTGCCCATTTTATCATTTTCTGCATCAGCACCTTATCTTACTTCGCTCCGGAGCCCTTACTTTTTTAGAATTACTCAAACCGACTCATACCAAGTGAAAGCCATTAGTGGCATTATTCAAAATTTTGGATGGAGACAAGTTGTACCAATCTACGTGGACAATATGTATGGGGAGGGAATCATACCTTTTCTCATTGATGCCTTGCAAGATGTTGATGCTCATGTCCCTTACCGTAGTGTCATTTCCCCATCAGCAACTGGTGACCAGATTATAAAAGAGCTTTACAAATTAATGACAATGCAAACTAGAGTCTTCATCGTTCATATGAAGTCCAATCTTTGCTCTAAGCTGTTTTCCAAGGCAAAAGAGATAGGAATGATGAGTAAAGGATATGTCTGGATCTTGACCGATGGGATTTCTAATCGTTTAAATTCGATGAATTCTTCAGTCATAGCTTCCATGGAAGGTGCGTTAGGTATCCAAACATTCATCCCAAGAACAACAGAACTTGAAAAATTCGAGCTCCGGTGGAAAGGGCAATTCCAACAAGACAACCCAACCATTATACATGTTCAATTGGATGTTTATGCACTTCAGGCTTATGATGCTGCTTTTGCATTAGCCATGTCAATTGAAAATGTTGGGATCAGTACAAGCTCTGAAATCCACAAGGATACTTCCTTCAACTCAACTGACCTTGATACTTATAAGGTCTCTGAAAATGGTCCTAAACTTGCTGAAGCATTATCACTTACTAGATTCAAAGGCATAGCTGGAGACTTCAAGCTTGAAGAAGGGCAACTTCAGTCATCAACTTTTACAATTGTTAATATAAAAGGTGAGGGAGAAAAACCAGTTGTAATTTGGACTCCGCAAAATCAAATGGTGAAAAAGTTGAATGACTCAACAAACACAAGCATCCTTTCAACTAATTCCAAGAGCAATCTTGGACCAATTAAATGGCCTGGAAATTCTCTCTCTGTTCCAAGGGGATGGGATATACCAACAAATGGCAAGAAGTTGATAATAGGAGTTCCTGTCAAGATTGATTTTACTGAATTTGTTAAGATCTCGAAAGATCCAAAGACAGGCACAATGGATGTCACTGGGTTCTGTATTGATGTCTTTCATGCTGCATTGAAAGTATTGCCTTATGCTCTTCCTTATGAGTTCACTCCCTTCTCAAACCCTAATGGCACCAGCGCTGGCAATTATAATGATTTGGTCTATCAAGTATATCTTGGGAAGTTTGATGCCGTCGTCGGAGATACAACAATTAGAGCAAATAGGTCCTTGTATGTGGACTTTACAATGCCATACACAGAATCTGGTGTTGTAATGGTGGTGCCAATCATAGACACAACGAGCAAGAATGCATGGGTTTTCTTGAAGCCTTTGACTTGGGACCTGTGGCTTACAACTTTTTGTTTCTTCCTCTTTACTGGTTTTGTTGTTTGGGTTCTTGAACATCGAATTAATGAAGCCTTTCGTGGTCCTCCTTCACATCAATTTGGGACTAGTGTCTGGTTTTCCTTCTCAACGATGGTTTTCTCACACAAAGAGAATGTGATTAGCAACTTGGCTAGATTCGTGATGATTATATGGGTATTCATTGTCCTAATATTGACACAAAGTTACACAGCTAATCTAGCATCGCTATTAACAGTCCAACAACTTAAGCCAACTGCTGTTGATATTAAGGATCTATTAAGGAAGGGGGATAATGTCGGATACTCTAAGAATGCTTATGTTTATGGACTCTTGAAAGAAGTAGGTTTCAATGATTCAAATCTTAAAGGTTTTAGAACTATGGAAGCACTTGATGAAGCTCTATCAAAAGGGAGTGCAAATGGTGGTATTGCTGCTTTTGTAGATGAAACCCCAACTATGAAGCTTTTTCTTGCAAAGTATTGTTCTAAATATACCATGATTGGACCCATCTTTAAAACTGAAGGGTTTGGTTTTGTGTTTCCAAAGCGTTCCCCTCTTGTACCTGATGTTTCACAAGCAATCCTAGACGTAACTGAAGGAGAGAAGATGATGAGCATTGAATCAAAATGGTTCAAGAAAGAAAGCAATTGTCAAAGCTCAAGCCAACTGGGTTCTAGCAATAGTCTTGGACTCGATAGCTTTTGGGGGTTATTCCTCATTGCTGGAGTGGCTTCAATATTCGCTCTCATCATATTTGTAGCTTCATTTCTTTATGAGAATGGACACCTATTGATAGATCCTGATTCAGAAGCTTCGACATCAGAAAGGATTGGGGTCTTGTTCAAAATTTTCAATCAGAAAGACCTAAATTCTCGTACATTTAAGAGCAGTCAACCGAGAGATCGTATCACTGGTGCTAGAGATGAAGTAAACATCTCACCAAATAACAACTGGCCAGAAAGTCCATTTAGCTACAGCAATCACAGTGATGGCAGTTCAGAGCAACACACACCACCTCCAGGTCAAGCATCTTTAGAATCAGTTCCAAGGCATGGATTCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

950

Amino Acids

105.31

Weight (kDa)

6.76

Isoelectric Point (pI)

27.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	27 - 336	8.3e-17	Periplasmic binding protein
ANF_receptor	PF01094	50 - 399	1.4e-82	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	478 - 568	7.5e-08	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	487 - 808	1.9e-07	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	586 - 840	1.5e-39	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	629, 1065, 1572
AccB1I	GGYRCC	2 cut(s)	1553, 1702
AccB7I	CCANNNNNTGG	2 cut(s)	1367, 2840
AccIII	TCCGGA	1 cut(s)	405
AciI	CCGC	3 cut(s)	120, 254, 1229
AclWI	GGATC	6 cut(s)	273, 764, 1010, 1430, 2067, 2579
AcoI	YGGCCR	2 cut(s)	48, 2741
AcsI	RAATTY	8 cut(s)	478, 787, 796, 872, 1327, 1415, 2634, 2656
AcuI	CTGAAG	6 cut(s)	786, 935, 1116, 1145, 2328, 2403
AfaI	GTAC	5 cut(s)	140, 501, 1009, 2349, 2665
AfeI	AGCGCT	1 cut(s)	1561
AfiI	CCNNNNNNNGG	4 cut(s)	1367, 1445, 2807, 2840
AflII	CTTAAG	1 cut(s)	2033
AflIII	ACRYGT	1 cut(s)	925
AhlI	ACTAGT	1 cut(s)	1874
AjnI	CCWGG	2 cut(s)	1321, 2806
Alw21I	GWGCWC	1 cut(s)	882
Alw26I	GTCTC	4 cut(s)	339, 484, 1075, 1128
AlwI	GGATC	6 cut(s)	273, 764, 1010, 1430, 2067, 2579
AlwNI	CAGNNNCTG	2 cut(s)	614, 1685
Aor13HI	TCCGGA	1 cut(s)	405
Aor51HI	AGCGCT	1 cut(s)	1561
AoxI	GGCC	5 cut(s)	48, 159, 302, 1319, 2741
ApeKI	GCWGC	6 cut(s)	248, 251, 257, 965, 1490, 2219
ApoI	RAATTY	8 cut(s)	478, 787, 796, 872, 1327, 1415, 2634, 2656
AseI	ATTAAT	3 cut(s)	57, 647, 1833
Asp700I	GAANNNNTTC	2 cut(s)	1842, 2829
AspLEI	GCGC	1 cut(s)	1562
AspS9I	GGNCC	8 cut(s)	160, 302, 1082, 1307, 1647, 1762, 1850, 2291
AsuHPI	GGTGA	4 cut(s)	629, 1208, 1255, 2718
AvaII	GGWCC	6 cut(s)	1082, 1307, 1647, 1762, 1850, 2291
BaeGI	GKGCMC	1 cut(s)	363
BalI	TGGCCA	2 cut(s)	50, 2743
BanI	GGYRCC	2 cut(s)	1553, 1702
BanII	GRGCYC	2 cut(s)	413, 882
BbsI	GAAGAC	2 cut(s)	131, 661
Bbv12I	GWGCWC	1 cut(s)	882
BbvI	GCAGC	6 cut(s)	238, 260, 269, 952, 1477, 2206
BccI	CCATC	7 cut(s)	480, 613, 761, 1344, 1894, 2303, 2771
BceAI	ACGGC	1 cut(s)	1598
BciT130I	CCWGG	2 cut(s)	1323, 2808
BciVI	GTATCC	3 cut(s)	845, 1024, 2081
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	4 cut(s)	339, 484, 1075, 1128
BcuI	ACTAGT	1 cut(s)	1874
BfaI	CTAG	9 cut(s)	290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
BfmI	CTRYAG	1 cut(s)	2761
BfoI	RGCGCY	1 cut(s)	1563
BfrI	CTTAAG	1 cut(s)	2033
BfuI	GTATCC	3 cut(s)	845, 1024, 2081
BglII	AGATCT	1 cut(s)	1425
BisI	GCNGC	7 cut(s)	249, 252, 255, 258, 966, 1491, 2220
BlsI	GCNGC	7 cut(s)	250, 253, 256, 259, 967, 1492, 2221
Bme1390I	CCNGG	2 cut(s)	1323, 2808
Bme18I	GGWCC	6 cut(s)	1082, 1307, 1647, 1762, 1850, 2291
BmgT120I	GGNCC	8 cut(s)	160, 302, 1082, 1307, 1647, 1762, 1850, 2291
BmiI	GGNNCC	5 cut(s)	410, 1555, 1704, 1763, 2293
BmrFI	CCNGG	2 cut(s)	1323, 2808
BmrI	ACTGGG	3 cut(s)	74, 1473, 2465
BmsI	GCATC	9 cut(s)	188, 389, 544, 562, 952, 1284, 1600, 2018, 2825
BmuI	ACTGGG	3 cut(s)	74, 1473, 2465
BoxI	GACNNNNGTC	1 cut(s)	1877
BpiI	GAAGAC	2 cut(s)	131, 661
BpmI	CTGGAG	3 cut(s)	1152, 2532, 2790
BpuEI	CTTGAG	2 cut(s)	163, 2431
BsaAI	YACGTR	1 cut(s)	511
BsaBI	GATNNNNATC	1 cut(s)	2145
BsaI	GGTCTC	1 cut(s)	1075
BsaJI	CCNNGG	4 cut(s)	714, 816, 1343, 2834
BsaWI	WCCGGW	2 cut(s)	405, 882
BsaXI	ACNNNNNCTCC	4 cut(s)	1380, 1410, 2788, 2818
Bsc4I	CCNNNNNNNGG	4 cut(s)	1367, 1445, 2807, 2840
Bse1I	ACTGG	8 cut(s)	80, 619, 1211, 1468, 1804, 2460, 2704, 2744
Bse3DI	GCAATG	1 cut(s)	2505
Bse8I	GATNNNNATC	1 cut(s)	2145
BseAI	TCCGGA	1 cut(s)	405
BseBI	CCWGG	2 cut(s)	1323, 2808
BseDI	CCNNGG	4 cut(s)	714, 816, 1343, 2834
BseGI	GGATG	7 cut(s)	184, 491, 846, 943, 1275, 1355, 1462
BseJI	GATNNNNATC	1 cut(s)	2145
BseLI	CCNNNNNNNGG	4 cut(s)	1367, 1445, 2807, 2840
BseMI	GCAATG	1 cut(s)	2505
BseMII	CTCAG	1 cut(s)	180
BseNI	ACTGG	8 cut(s)	80, 619, 1211, 1468, 1804, 2460, 2704, 2744
BseSI	GKGCMC	1 cut(s)	363
BseXI	GCAGC	6 cut(s)	238, 260, 269, 952, 1477, 2206
BsgI	GTGCAG	1 cut(s)	267
BshFI	GGCC	5 cut(s)	50, 161, 304, 1321, 2743
BshNI	GGYRCC	2 cut(s)	1553, 1702
BsiHKAI	GWGCWC	1 cut(s)	882
BsiSI	CCGG	2 cut(s)	406, 883
BslFI	GGGAC	3 cut(s)	566, 1775, 1885
BslI	CCNNNNNNNGG	4 cut(s)	1367, 1445, 2807, 2840
BsmAI	GTCTC	4 cut(s)	339, 484, 1075, 1128
BsmBI	CGTCTC	1 cut(s)	339
BsmFI	GGGAC	3 cut(s)	566, 1775, 1885
BsmI	GAATGC	3 cut(s)	283, 1735, 2104
BsnI	GGCC	5 cut(s)	50, 161, 304, 1321, 2743
Bso31I	GGTCTC	1 cut(s)	1075
Bsp1286I	GDGCHC	3 cut(s)	363, 413, 882
Bsp13I	TCCGGA	1 cut(s)	405
Bsp143I	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
Bsp19I	CCATGG	1 cut(s)	816
BspACI	CCGC	3 cut(s)	120, 254, 1229
BspANI	GGCC	5 cut(s)	50, 161, 304, 1321, 2743
BspCNI	CTCAG	1 cut(s)	179
BspEI	TCCGGA	1 cut(s)	405
BspLI	GGNNCC	5 cut(s)	410, 1555, 1704, 1763, 2293
BspPI	GGATC	6 cut(s)	273, 764, 1010, 1430, 2067, 2579
BspQI	GCTCTTC	1 cut(s)	1521
BspT107I	GGYRCC	2 cut(s)	1553, 1702
BspTI	CTTAAG	1 cut(s)	2033
BspTNI	GGTCTC	1 cut(s)	1075
BsrDI	GCAATG	1 cut(s)	2505
BsrI	ACTGG	8 cut(s)	80, 619, 1211, 1468, 1804, 2460, 2704, 2744
BssECI	CCNNGG	4 cut(s)	714, 816, 1343, 2834
BssMI	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
BssT1I	CCWWGG	4 cut(s)	714, 816, 1343, 2834
Bst2UI	CCWGG	2 cut(s)	1323, 2808
Bst4CI	ACNGT	4 cut(s)	238, 590, 2023, 2774
Bst6I	CTCTTC	2 cut(s)	35, 1521
BstAFI	CTTAAG	1 cut(s)	2033
BstBAI	YACGTR	1 cut(s)	511
BstC8I	GCNNGC	3 cut(s)	321, 325, 1564
BstDEI	CTNAG	3 cut(s)	166, 702, 2094
BstDSI	CCRYGG	1 cut(s)	816
BstEII	GGTNACC	1 cut(s)	617
BstF5I	GGATG	7 cut(s)	184, 491, 846, 943, 1275, 1355, 1462
BstH2I	RGCGCY	1 cut(s)	1563
BstHHI	GCGC	1 cut(s)	1562
BstKTI	GATC	9 cut(s)	6, 268, 759, 1005, 1428, 1438, 2062, 2587, 2692
BstMAI	GTCTC	4 cut(s)	339, 484, 1075, 1128
BstMBI	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
BstMWI	GCNNNNNNNGC	7 cut(s)	254, 257, 953, 962, 971, 2006, 2516
BstNI	CCWGG	2 cut(s)	1323, 2808
BstNSI	RCATGY	1 cut(s)	929
BstPAI	GACNNNNGTC	1 cut(s)	1877
BstPI	GGTNACC	1 cut(s)	617
BstSCI	CCNGG	2 cut(s)	1321, 2806
BstSFI	CTRYAG	1 cut(s)	2761
BstSLI	GKGCMC	1 cut(s)	363
BstV1I	GCAGC	6 cut(s)	238, 260, 269, 952, 1477, 2206
BstV2I	GAAGAC	2 cut(s)	131, 661
BstX2I	RGATCY	6 cut(s)	265, 756, 1425, 1435, 2059, 2584
BstXI	CCANNNNNNTGG	2 cut(s)	1317, 1350
BstYI	RGATCY	6 cut(s)	265, 756, 1425, 1435, 2059, 2584
BsuI	GTATCC	3 cut(s)	845, 1024, 2081
BsuRI	GGCC	5 cut(s)	50, 161, 304, 1321, 2743
BtgI	CCRYGG	1 cut(s)	816
BtgZI	GCGATG	1 cut(s)	1995
BtsCI	GGATG	7 cut(s)	184, 491, 846, 943, 1275, 1355, 1462
BtsIMutI	CAGTG	4 cut(s)	87, 1461, 2697, 2779
Cac8I	GCNNGC	3 cut(s)	321, 325, 1564
CaiI	CAGNNNCTG	2 cut(s)	614, 1685
CfoI	GCGC	1 cut(s)	1562
Cfr13I	GGNCC	8 cut(s)	160, 302, 1082, 1307, 1647, 1762, 1850, 2291
Csp6I	GTAC	5 cut(s)	139, 500, 1008, 2348, 2664
CspCI	CAANNNNNGTGG	2 cut(s)	492, 527
CviQI	GTAC	5 cut(s)	139, 500, 1008, 2348, 2664
DdeI	CTNAG	3 cut(s)	166, 702, 2094
DpnI	GATC	9 cut(s)	5, 267, 758, 1004, 1427, 1437, 2061, 2586, 2691
DpnII	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
DraI	TTTAAA	2 cut(s)	786, 2302
EaeI	YGGCCR	2 cut(s)	48, 2741
Eam1104I	CTCTTC	2 cut(s)	35, 1521
EarI	CTCTTC	2 cut(s)	35, 1521
Ecl136II	GAGCTC	1 cut(s)	880
Eco130I	CCWWGG	4 cut(s)	714, 816, 1343, 2834
Eco24I	GRGCYC	2 cut(s)	413, 882
Eco31I	GGTCTC	1 cut(s)	1075
Eco47I	GGWCC	6 cut(s)	1082, 1307, 1647, 1762, 1850, 2291
Eco47III	AGCGCT	1 cut(s)	1561
Eco53kI	GAGCTC	1 cut(s)	880
Eco57I	CTGAAG	6 cut(s)	786, 935, 1116, 1145, 2328, 2403
Eco91I	GGTNACC	1 cut(s)	617
EcoICRI	GAGCTC	1 cut(s)	880
EcoO109I	RGGNCCY	3 cut(s)	302, 1647, 1762
EcoO65I	GGTNACC	1 cut(s)	617
EcoRI	GAATTC	1 cut(s)	796
EcoRII	CCWGG	2 cut(s)	1321, 2806
EcoT14I	CCWWGG	4 cut(s)	714, 816, 1343, 2834
EcoT22I	ATGCAT	2 cut(s)	181, 1735
EcoT38I	GRGCYC	2 cut(s)	413, 882
ErhI	CCWWGG	4 cut(s)	714, 816, 1343, 2834
Esp3I	CGTCTC	1 cut(s)	339
FalI	AAGNNNNNCTT	6 cut(s)	125, 157, 1143, 1175, 1581, 1613
FaqI	GGGAC	3 cut(s)	566, 1775, 1885
FauI	CCCGC	1 cut(s)	113
FauNDI	CATATG	1 cut(s)	681
FbaI	TGATCA	1 cut(s)	3
Fnu4HI	GCNGC	7 cut(s)	249, 252, 255, 258, 966, 1491, 2220
FokI	GGATG	7 cut(s)	171, 498, 833, 950, 1262, 1362, 1469
FriOI	GRGCYC	2 cut(s)	413, 882
Fsp4HI	GCNGC	7 cut(s)	249, 252, 255, 258, 966, 1491, 2220
FspBI	CTAG	9 cut(s)	290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
GlaI	GCGC	1 cut(s)	1561
GluI	GCNGC	7 cut(s)	249, 252, 255, 258, 966, 1491, 2220
GsuI	CTGGAG	3 cut(s)	1152, 2532, 2790
HaeII	RGCGCY	1 cut(s)	1563
HaeIII	GGCC	5 cut(s)	50, 161, 304, 1321, 2743
HapII	CCGG	2 cut(s)	406, 883
HhaI	GCGC	1 cut(s)	1562
Hin6I	GCGC	1 cut(s)	1560
HinP1I	GCGC	1 cut(s)	1560
HincII	GTYRAC	1 cut(s)	2681
HindII	GTYRAC	1 cut(s)	2681
HindIII	AAGCTT	3 cut(s)	1142, 2249, 2598
HpaII	CCGG	2 cut(s)	406, 883
HphI	GGTGA	4 cut(s)	629, 1208, 1255, 2718
Hpy166II	GTNNAC	6 cut(s)	139, 514, 1530, 1660, 2681, 2719
Hpy8I	GTNNAC	6 cut(s)	139, 514, 1530, 1660, 2681, 2719
Hpy99I	CGWCG	2 cut(s)	1619, 1622
HpyAV	CCTTC	9 cut(s)	815, 1048, 1145, 1546, 1866, 1900, 2065, 2303, 2378
HpyCH4III	ACNGT	4 cut(s)	238, 590, 2023, 2774
HpyCH4IV	ACGT	2 cut(s)	510, 2376
HpyF10VI	GCNNNNNNNGC	7 cut(s)	254, 257, 953, 962, 971, 2006, 2516
HpyF3I	CTNAG	3 cut(s)	166, 702, 2094
HpySE526I	ACGT	2 cut(s)	510, 2376
HspAI	GCGC	1 cut(s)	1560
Kpn2I	TCCGGA	1 cut(s)	405
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
LguI	GCTCTTC	1 cut(s)	1521
LmnI	GCTCC	3 cut(s)	408, 408, 885
Lsp1109I	GCAGC	6 cut(s)	238, 260, 269, 952, 1477, 2206
LweI	GCATC	9 cut(s)	188, 389, 544, 562, 952, 1284, 1600, 2018, 2825
MaeI	CTAG	9 cut(s)	290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
MaeII	ACGT	2 cut(s)	510, 2376
MaeIII	GTNAC	4 cut(s)	617, 1459, 1991, 2377
MalI	GATC	9 cut(s)	5, 267, 758, 1004, 1427, 1437, 2061, 2586, 2691
MboI	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
MboII	GAAGA	9 cut(s)	22, 22, 136, 661, 792, 1160, 1508, 1780, 2404
MfeI	CAATTG	4 cut(s)	932, 987, 1179, 2434
MflI	RGATCY	6 cut(s)	265, 756, 1425, 1435, 2059, 2584
MhlI	GDGCHC	3 cut(s)	363, 413, 882
MlsI	TGGCCA	2 cut(s)	50, 2743
MluNI	TGGCCA	2 cut(s)	50, 2743
MlyI	GAGTC	6 cut(s)	434, 675, 1219, 1253, 2109, 2472
MmeI	TCCRAC	4 cut(s)	925, 1600, 2050, 2065
MnlI	CCTC	9 cut(s)	173, 195, 523, 1192, 1802, 1863, 2352, 2513, 2814
Mox20I	TGGCCA	2 cut(s)	50, 2743
Mph1103I	ATGCAT	2 cut(s)	181, 1735
MroI	TCCGGA	1 cut(s)	405
MroXI	GAANNNNTTC	2 cut(s)	1842, 2829
MscI	TGGCCA	2 cut(s)	50, 2743
MslI	CAYNNNNRTG	2 cut(s)	155, 2775
Msp20I	TGGCCA	2 cut(s)	50, 2743
MspA1I	CMGCKG	1 cut(s)	251
MspCI	CTTAAG	1 cut(s)	2033
MspI	CCGG	2 cut(s)	406, 883
MspR9I	CCNGG	2 cut(s)	1323, 2808
MunI	CAATTG	4 cut(s)	932, 987, 1179, 2434
Mva1269I	GAATGC	3 cut(s)	283, 1735, 2104
MvaI	CCWGG	2 cut(s)	1323, 2808
MwoI	GCNNNNNNNGC	7 cut(s)	254, 257, 953, 962, 971, 2006, 2516
NcoI	CCATGG	1 cut(s)	816
NdeI	CATATG	1 cut(s)	681
NdeII	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
NlaIV	GGNNCC	5 cut(s)	410, 1555, 1704, 1763, 2293
NmuCI	GTSAC	2 cut(s)	617, 1459
NsiI	ATGCAT	2 cut(s)	181, 1735
NspI	RCATGY	1 cut(s)	929
PciI	ACATGT	1 cut(s)	925
PciSI	GCTCTTC	1 cut(s)	1521
PctI	GAATGC	3 cut(s)	283, 1735, 2104
PdmI	GAANNNNTTC	2 cut(s)	1842, 2829
PflMI	CCANNNNNTGG	2 cut(s)	1367, 2840
PkrI	GCNGC	7 cut(s)	250, 253, 256, 259, 967, 1492, 2221
PleI	GAGTC	6 cut(s)	434, 674, 1219, 1253, 2109, 2472
PpsI	GAGTC	6 cut(s)	434, 674, 1219, 1253, 2109, 2472
Ppu21I	YACGTR	1 cut(s)	511
PpuMI	RGGWCCY	2 cut(s)	1647, 1762
PscI	ACATGT	1 cut(s)	925
PshAI	GACNNNNGTC	1 cut(s)	1877
PshBI	ATTAAT	3 cut(s)	57, 647, 1833
PsiI	TTATAA	3 cut(s)	629, 1065, 1572
Psp124BI	GAGCTC	1 cut(s)	882
Psp5II	RGGWCCY	2 cut(s)	1647, 1762
Psp6I	CCWGG	2 cut(s)	1321, 2806
PspEI	GGTNACC	1 cut(s)	617
PspGI	CCWGG	2 cut(s)	1321, 2806
PspN4I	GGNNCC	5 cut(s)	410, 1555, 1704, 1763, 2293
PspPI	GGNCC	8 cut(s)	160, 302, 1082, 1307, 1647, 1762, 1850, 2291
PspPPI	RGGWCCY	2 cut(s)	1647, 1762
PstNI	CAGNNNCTG	2 cut(s)	614, 1685
PsuI	RGATCY	6 cut(s)	265, 756, 1425, 1435, 2059, 2584
PvuII	CAGCTG	1 cut(s)	251
RsaI	GTAC	5 cut(s)	140, 501, 1009, 2349, 2665
RsaNI	GTAC	5 cut(s)	139, 500, 1008, 2348, 2664
RseI	CAYNNNNRTG	2 cut(s)	155, 2775
SacI	GAGCTC	1 cut(s)	882
SapI	GCTCTTC	1 cut(s)	1521
SatI	GCNGC	7 cut(s)	249, 252, 255, 258, 966, 1491, 2220
Sau3AI	GATC	9 cut(s)	3, 265, 756, 1002, 1425, 1435, 2059, 2584, 2689
Sau96I	GGNCC	8 cut(s)	160, 302, 1082, 1307, 1647, 1762, 1850, 2291
SchI	GAGTC	6 cut(s)	434, 675, 1219, 1253, 2109, 2472
ScrFI	CCNGG	2 cut(s)	1323, 2808
SduI	GDGCHC	3 cut(s)	363, 413, 882
SfaNI	GCATC	9 cut(s)	188, 389, 544, 562, 952, 1284, 1600, 2018, 2825
SfcI	CTRYAG	1 cut(s)	2761
SinI	GGWCC	6 cut(s)	1082, 1307, 1647, 1762, 1850, 2291
SmiMI	CAYNNNNRTG	2 cut(s)	155, 2775
SmlI	CTYRAG	3 cut(s)	142, 2033, 2446
SmoI	CTYRAG	3 cut(s)	142, 2033, 2446
SpeI	ACTAGT	1 cut(s)	1874
SsiI	CCGC	3 cut(s)	120, 254, 1229
SspI	AATATT	3 cut(s)	297, 1980, 2526
SspMI	CTAG	9 cut(s)	290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
SstI	GAGCTC	1 cut(s)	882
StyD4I	CCNGG	2 cut(s)	1321, 2806
StyI	CCWWGG	4 cut(s)	714, 816, 1343, 2834
TaaI	ACNGT	4 cut(s)	238, 590, 2023, 2774
TaiI	ACGT	2 cut(s)	513, 2379
TaqI	TCGA	6 cut(s)	791, 876, 1430, 1828, 2481, 2603
TaqII	GACCGA	1 cut(s)	779
TatI	WGTACW	2 cut(s)	138, 1007
TauI	GCSGC	1 cut(s)	257
TscAI	CASTG	4 cut(s)	87, 1468, 2704, 2779
TseFI	GTSAC	2 cut(s)	617, 1459
TseI	GCWGC	6 cut(s)	248, 251, 257, 965, 1490, 2219
Tsp45I	GTSAC	2 cut(s)	617, 1459
TspRI	CASTG	4 cut(s)	87, 1468, 2704, 2779
Van91I	CCANNNNNTGG	2 cut(s)	1367, 2840
Vha464I	CTTAAG	1 cut(s)	2033
VpaK11BI	GGWCC	6 cut(s)	1082, 1307, 1647, 1762, 1850, 2291
VspI	ATTAAT	3 cut(s)	57, 647, 1833
XapI	RAATTY	8 cut(s)	478, 787, 796, 872, 1327, 1415, 2634, 2656
XceI	RCATGY	1 cut(s)	929
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1218, 2736
XmnI	GAANNNNTTC	2 cut(s)	1842, 2829
XspI	CTAG	9 cut(s)	290, 663, 1113, 1875, 1941, 2006, 2372, 2463, 2706
Zsp2I	ATGCAT	2 cut(s)	181, 1735

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.