RchiOBHm_Chr6g0269641

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
26978038 .. 26979469
1432 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24187

Sequence Viewer

Length: 1254 bp
ATGGCCGTTGAAGAACTTGGGACTACAAGCTTTGTCTTCCAAACCACCATTTCTTCCACAAACTCATCATCAGATCTAGAGACTTTGGGGGTATCGCAAAATGGTTATCAGCTTAGCCGATCCTTGGCAAGGACGAAATTTAGAGGTCTTGCTGGAAATTTCAGTTTTGATAATGGACAGTTACAATCTTCCATCTTTGAAATATTGAATGTGATTGGTGCTGGAGCAAGAGCAATTGGGTTTTGGACACCTGAAAATGGACTGGTGAGAAATCTGATCATTAATTCGACAAACACGTCTGCACCAAATTTAGGCTTTGTCATATGGCCCGGAGAGCATGGCTCCATTCCTAAGGGATGGGAGATCCCAACAAATGGAAAAAAGTTAAGAGTTGGAGTTCCAGTGAAGGATGGTTTTACAGAGTTTGTTAAGGTGGTACGTGATAACAGCACTAATACAACACCAGATGTTATTACTGGATTCTGTATTGACGTCTTTAATGCTGCAATGGAAGGGTTACCATATGCCGTTACTTATGACTTCATTCCCTTTGCATTTTCAAATGGCAGTTCTGCGGGAACTTATGATGATTTGGTCTATCAGGTTTTCCTTGGGGATTATGATGCAGTGGCAGCAGATTCAACAATTAGAGCAAACAGGTCACTGTATGTGGACTTTACATTGCCATATACTGAATCTGGTGTAGTAATGGTAGTGCCAATGAAAGATAAAAACTGGATTAAAAATGCATGGATTTTCTTGAAGCCTTTGACATGGGACTTGTGGCTTGCGAGTTTCTTTTCCTTCGTCTTCATTGGTTTTGTGGTTTGGCTTCTTGAACACCGAGTAAATGAAGATTTTCGTGGGCCTCCCACACATCAAGTTGGCACTGGCCTCTGGTTCTCTTTCTCAACAATGGTTTTTGCACAGCGGGAGAGAGTCGTTAGCAACTTGTCTAGGTTTGTGGTGATAGTATGGGTATTTGTGGTGCTCATACTGACTCAAAGTTACACAGCGAGTCTGACTTCACTGCTAACTGTGCAAAAGCTTGAGCCAACTTATACAAATATAAGCCATCTGATAAGCAATACTAAGGAGTATGTGGGCTGCCTGGATGGCTCTTTTGTCTGCGACCTTTTACAACAACGTTTCCATGCTTCCAATATTAGGAAGTATAAATCTGCACAAGAATGTAACCAACTTTTGATAAACGGGAGTCAAAACGGGGAGCCATTGACGAAACTCCAAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

417

Amino Acids

46.39

Weight (kDa)

5.8

Isoelectric Point (pI)

25.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 1 - 73 1.4e-06 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 147 - 240 9e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 258 - 399 4e-31 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 295
AatII GACGTC 1 cut(s) 495
AccB7I CCANNNNNTGG 1 cut(s) 374
AciI CCGC 2 cut(s) 575, 931
AclI AACGTT 1 cut(s) 1147
AclWI GGATC 2 cut(s) 114, 358
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 137, 157, 307
AcyI GRCGYC 1 cut(s) 492
AfaI GTAC 1 cut(s) 438
AfiI CCNNNNNNNGG 6 cut(s) 124, 129, 257, 311, 374, 1167
AflIII ACRYGT 1 cut(s) 294
AgsI TTSAA 7 cut(s) 11, 200, 208, 561, 642, 763, 839
AjiI CACGTC 1 cut(s) 297
AjnI CCWGG 1 cut(s) 1110
AluBI AGCT 3 cut(s) 30, 112, 1048
AluI AGCT 3 cut(s) 30, 112, 1048
Alw21I GWGCWC 1 cut(s) 993
Alw26I GTCTC 1 cut(s) 74
AlwI GGATC 2 cut(s) 114, 358
AoxI GGCC 4 cut(s) 3, 326, 866, 892
ApeKI GCWGC 3 cut(s) 503, 632, 1107
ApoI RAATTY 3 cut(s) 137, 157, 307
AseI ATTAAT 1 cut(s) 282
Asp700I GAANNNNTTC 1 cut(s) 858
AspS9I GGNCC 2 cut(s) 327, 866
AsuC2I CCSGG 1 cut(s) 330
AsuHPI GGTGA 2 cut(s) 277, 979
AxyI CCTNAGG 1 cut(s) 351
BbsI GAAGAC 2 cut(s) 28, 802
Bbv12I GWGCWC 1 cut(s) 993
BbvI GCAGC 3 cut(s) 490, 644, 1094
BccI CCATC 5 cut(s) 200, 351, 404, 1083, 1109
BceAI ACGGC 1 cut(s) 512
BciT130I CCWGG 1 cut(s) 1112
BclI TGATCA 1 cut(s) 276
BcnI CCSGG 1 cut(s) 330
BcoDI GTCTC 1 cut(s) 74
BfaI CTAG 2 cut(s) 77, 957
BglI GCCNNNNNGGC 1 cut(s) 1116
BglII AGATCT 1 cut(s) 73
BisI GCNGC 3 cut(s) 504, 633, 1108
BlpI GCTNAGC 1 cut(s) 113
BlsI GCNGC 3 cut(s) 505, 634, 1109
Bme1390I CCNGG 2 cut(s) 330, 1112
BmgBI CACGTC 1 cut(s) 297
BmgT120I GGNCC 2 cut(s) 327, 866
BmiI GGNNCC 2 cut(s) 343, 1230
BmrFI CCNGG 2 cut(s) 330, 1112
BmsI GCATC 1 cut(s) 613
BpiI GAAGAC 2 cut(s) 28, 802
BplI GAGNNNNNCTC 2 cut(s) 326, 358
BpmI CTGGAG 1 cut(s) 243
Bpu1102I GCTNAGC 1 cut(s) 113
BpuEI CTTGAG 1 cut(s) 1070
BpuMI CCSGG 1 cut(s) 330
BsaAI YACGTR 1 cut(s) 440
BsaHI GRCGYC 1 cut(s) 492
BsaJI CCNNGG 2 cut(s) 123, 610
BsaXI ACNNNNNCTCC 2 cut(s) 387, 417
Bsc4I CCNNNNNNNGG 6 cut(s) 124, 129, 257, 311, 374, 1167
Bse1I ACTGG 5 cut(s) 267, 401, 481, 740, 895
Bse21I CCTNAGG 1 cut(s) 351
Bse3DI GCAATG 2 cut(s) 513, 680
BseBI CCWGG 1 cut(s) 1112
BseDI CCNNGG 2 cut(s) 123, 610
BseGI GGATG 3 cut(s) 362, 415, 1120
BseLI CCNNNNNNNGG 6 cut(s) 124, 129, 257, 311, 374, 1167
BseMI GCAATG 2 cut(s) 513, 680
BseNI ACTGG 5 cut(s) 267, 401, 481, 740, 895
BseXI GCAGC 3 cut(s) 490, 644, 1094
BsgI GTGCAG 2 cut(s) 285, 1167
BshFI GGCC 4 cut(s) 5, 328, 868, 894
BsiHKAI GWGCWC 1 cut(s) 993
BsiSI CCGG 1 cut(s) 330
BslFI GGGAC 2 cut(s) 34, 791
BslI CCNNNNNNNGG 6 cut(s) 124, 129, 257, 311, 374, 1167
BsmAI GTCTC 1 cut(s) 74
BsmFI GGGAC 2 cut(s) 34, 791
BsnI GGCC 4 cut(s) 5, 328, 868, 894
Bsp1286I GDGCHC 1 cut(s) 993
Bsp143I GATC 4 cut(s) 73, 119, 276, 363
Bsp1720I GCTNAGC 1 cut(s) 113
BspACI CCGC 2 cut(s) 575, 931
BspANI GGCC 4 cut(s) 5, 328, 868, 894
BspLI GGNNCC 2 cut(s) 343, 1230
BspPI GGATC 2 cut(s) 114, 358
BsrDI GCAATG 2 cut(s) 513, 680
BsrI ACTGG 5 cut(s) 267, 401, 481, 740, 895
BssECI CCNNGG 2 cut(s) 123, 610
BssMI GATC 4 cut(s) 73, 119, 276, 363
BssNI GRCGYC 1 cut(s) 492
BssT1I CCWWGG 2 cut(s) 123, 610
Bst2UI CCWGG 1 cut(s) 1112
Bst4CI ACNGT 3 cut(s) 180, 666, 1039
BstACI GRCGYC 1 cut(s) 492
BstBAI YACGTR 1 cut(s) 440
BstC8I GCNNGC 1 cut(s) 789
BstDEI CTNAG 3 cut(s) 113, 351, 1092
BstEII GGTNACC 1 cut(s) 516
BstENI CCTNNNNNAGG 1 cut(s) 127
BstF5I GGATG 3 cut(s) 362, 415, 1120
BstKTI GATC 4 cut(s) 76, 122, 279, 366
BstMAI GTCTC 1 cut(s) 74
BstMBI GATC 4 cut(s) 73, 119, 276, 363
BstMWI GCNNNNNNNGC 4 cut(s) 334, 632, 1039, 1116
BstNI CCWGG 1 cut(s) 1112
BstPI GGTNACC 1 cut(s) 516
BstSCI CCNGG 2 cut(s) 328, 1110
BstV1I GCAGC 3 cut(s) 490, 644, 1094
BstV2I GAAGAC 2 cut(s) 28, 802
BstX2I RGATCY 2 cut(s) 73, 363
BstYI RGATCY 2 cut(s) 73, 363
Bsu36I CCTNAGG 1 cut(s) 351
BsuRI GGCC 4 cut(s) 5, 328, 868, 894
BtrI CACGTC 1 cut(s) 297
BtsCI GGATG 3 cut(s) 362, 415, 1120
BtsI GCAGTG 2 cut(s) 633, 1028
BtsIMutI CAGTG 5 cut(s) 408, 633, 662, 888, 1028
Cac8I GCNNGC 1 cut(s) 789
Cfr13I GGNCC 2 cut(s) 327, 866
Csp6I GTAC 1 cut(s) 437
CviAII CATG 5 cut(s) 338, 750, 774, 1154, 1251
CviQI GTAC 1 cut(s) 437
DdeI CTNAG 3 cut(s) 113, 351, 1092
DpnI GATC 4 cut(s) 75, 121, 278, 365
DpnII GATC 4 cut(s) 73, 119, 276, 363
DrdI GACNNNNNNGTC 1 cut(s) 295
DseDI GACNNNNNNGTC 1 cut(s) 295
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 2 cut(s) 123, 610
Eco81I CCTNAGG 1 cut(s) 351
Eco91I GGTNACC 1 cut(s) 516
EcoNI CCTNNNNNAGG 1 cut(s) 127
EcoO65I GGTNACC 1 cut(s) 516
EcoRII CCWGG 1 cut(s) 1110
EcoT14I CCWWGG 2 cut(s) 123, 610
EcoT22I ATGCAT 1 cut(s) 751
ErhI CCWWGG 2 cut(s) 123, 610
FaeI CATG 5 cut(s) 341, 753, 777, 1157, 1254
FaqI GGGAC 2 cut(s) 34, 791
FatI CATG 5 cut(s) 337, 749, 773, 1153, 1250
FauI CCCGC 2 cut(s) 568, 924
FauNDI CATATG 2 cut(s) 323, 523
FbaI TGATCA 1 cut(s) 276
Fnu4HI GCNGC 3 cut(s) 504, 633, 1108
FokI GGATG 3 cut(s) 369, 422, 1127
Fsp4HI GCNGC 3 cut(s) 504, 633, 1108
FspBI CTAG 2 cut(s) 77, 957
GluI GCNGC 3 cut(s) 504, 633, 1108
GsuI CTGGAG 1 cut(s) 243
HaeIII GGCC 4 cut(s) 5, 328, 868, 894
HapII CCGG 1 cut(s) 330
Hin1I GRCGYC 1 cut(s) 492
Hin1II CATG 5 cut(s) 341, 753, 777, 1157, 1254
HindIII AAGCTT 2 cut(s) 28, 1046
HinfI GANTC 7 cut(s) 480, 638, 695, 939, 1000, 1018, 1216
HpaII CCGG 1 cut(s) 330
HphI GGTGA 2 cut(s) 277, 979
Hpy166II GTNNAC 1 cut(s) 673
Hpy188I TCNGA 4 cut(s) 73, 276, 1023, 1080
Hpy188III TCNNGA 3 cut(s) 77, 760, 836
Hpy8I GTNNAC 1 cut(s) 673
HpyAV CCTTC 3 cut(s) 400, 506, 814
HpyCH4III ACNGT 3 cut(s) 180, 666, 1039
HpyCH4IV ACGT 4 cut(s) 296, 439, 492, 1147
HpyCH4V TGCA 8 cut(s) 302, 506, 554, 626, 749, 926, 1042, 1184
HpyF10VI GCNNNNNNNGC 4 cut(s) 334, 632, 1039, 1116
HpyF3I CTNAG 3 cut(s) 113, 351, 1092
HpySE526I ACGT 4 cut(s) 296, 439, 492, 1147
Hsp92I GRCGYC 1 cut(s) 492
Hsp92II CATG 5 cut(s) 341, 753, 777, 1157, 1254
Ksp22I TGATCA 1 cut(s) 276
Kzo9I GATC 4 cut(s) 73, 119, 276, 363
LmnI GCTCC 3 cut(s) 224, 347, 1228
Lsp1109I GCAGC 3 cut(s) 490, 644, 1094
LweI GCATC 1 cut(s) 613
MaeI CTAG 2 cut(s) 77, 957
MaeII ACGT 4 cut(s) 296, 439, 492, 1147
MaeIII GTNAC 6 cut(s) 180, 516, 529, 660, 1007, 1193
MalI GATC 4 cut(s) 75, 121, 278, 365
MboI GATC 4 cut(s) 73, 119, 276, 363
MboII GAAGA 6 cut(s) 23, 28, 45, 180, 802, 866
MfeI CAATTG 1 cut(s) 234
MflI RGATCY 2 cut(s) 73, 363
MhlI GDGCHC 1 cut(s) 993
MluCI AATT 6 cut(s) 137, 157, 234, 283, 307, 645
MlyI GAGTC 4 cut(s) 948, 994, 1027, 1225
MmeI TCCRAC 1 cut(s) 373
MnlI CCTC 3 cut(s) 137, 879, 905
Mph1103I ATGCAT 1 cut(s) 751
MroXI GAANNNNTTC 1 cut(s) 858
MseI TTAA 5 cut(s) 282, 386, 429, 498, 741
MslI CAYNNNNRTG 1 cut(s) 1189
MspA1I CMGCKG 1 cut(s) 931
MspI CCGG 1 cut(s) 330
MspR9I CCNGG 2 cut(s) 330, 1112
MunI CAATTG 1 cut(s) 234
MvaI CCWGG 1 cut(s) 1112
MwoI GCNNNNNNNGC 4 cut(s) 334, 632, 1039, 1116
NciI CCSGG 1 cut(s) 330
NdeI CATATG 2 cut(s) 323, 523
NdeII GATC 4 cut(s) 73, 119, 276, 363
NlaIII CATG 5 cut(s) 341, 753, 777, 1157, 1254
NlaIV GGNNCC 2 cut(s) 343, 1230
NmuCI GTSAC 1 cut(s) 660
NsiI ATGCAT 1 cut(s) 751
PcsI WCGNNNNNNNCGW 1 cut(s) 293
PdmI GAANNNNTTC 1 cut(s) 858
PfeI GAWTC 3 cut(s) 480, 638, 695
PflMI CCANNNNNTGG 1 cut(s) 374
PkrI GCNGC 3 cut(s) 505, 634, 1109
PleI GAGTC 4 cut(s) 947, 994, 1026, 1224
PpsI GAGTC 4 cut(s) 947, 994, 1026, 1224
Ppu21I YACGTR 1 cut(s) 440
PshBI ATTAAT 1 cut(s) 282
Psp1406I AACGTT 1 cut(s) 1147
Psp6I CCWGG 1 cut(s) 1110
PspEI GGTNACC 1 cut(s) 516
PspGI CCWGG 1 cut(s) 1110
PspN4I GGNNCC 2 cut(s) 343, 1230
PspPI GGNCC 2 cut(s) 327, 866
PsuI RGATCY 2 cut(s) 73, 363
RsaI GTAC 1 cut(s) 438
RsaNI GTAC 1 cut(s) 437
RseI CAYNNNNRTG 1 cut(s) 1189
SaqAI TTAA 5 cut(s) 282, 386, 429, 498, 741
SatI GCNGC 3 cut(s) 504, 633, 1108
Sau3AI GATC 4 cut(s) 73, 119, 276, 363
Sau96I GGNCC 2 cut(s) 327, 866
SchI GAGTC 4 cut(s) 948, 994, 1027, 1225
ScrFI CCNGG 2 cut(s) 330, 1112
SduI GDGCHC 1 cut(s) 993
SfaNI GCATC 1 cut(s) 613
SmiMI CAYNNNNRTG 1 cut(s) 1189
SmlI CTYRAG 1 cut(s) 1049
SmoI CTYRAG 1 cut(s) 1049
Sse9I AATT 6 cut(s) 137, 157, 234, 283, 307, 645
SsiI CCGC 2 cut(s) 575, 931
SspI AATATT 2 cut(s) 204, 1165
SspMI CTAG 2 cut(s) 77, 957
StyD4I CCNGG 2 cut(s) 328, 1110
StyI CCWWGG 2 cut(s) 123, 610
TaaI ACNGT 3 cut(s) 180, 666, 1039
TaiI ACGT 4 cut(s) 299, 442, 495, 1150
TaqI TCGA 1 cut(s) 287
TasI AATT 6 cut(s) 137, 157, 234, 283, 307, 645
TfiI GAWTC 3 cut(s) 480, 638, 695
Tru1I TTAA 5 cut(s) 282, 386, 429, 498, 741
Tru9I TTAA 5 cut(s) 282, 386, 429, 498, 741
TscAI CASTG 5 cut(s) 408, 633, 669, 895, 1035
TseFI GTSAC 1 cut(s) 660
TseI GCWGC 3 cut(s) 503, 632, 1107
Tsp45I GTSAC 1 cut(s) 660
TspDTI ATGAA 4 cut(s) 532, 737, 802, 867
TspRI CASTG 5 cut(s) 408, 633, 669, 895, 1035
Van91I CCANNNNNTGG 1 cut(s) 374
VspI ATTAAT 1 cut(s) 282
XagI CCTNNNNNAGG 1 cut(s) 127
XapI RAATTY 3 cut(s) 137, 157, 307
XbaI TCTAGA 1 cut(s) 76
XmnI GAANNNNTTC 1 cut(s) 858
XspI CTAG 2 cut(s) 77, 957
ZraI GACGTC 1 cut(s) 493
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.