Rorug06G0459200

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
58614455 .. 58616557
2103 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0459200.1

Sequence Viewer

Length: 2103 bp
ATGGGAAAAAAGAAGACAGATGAAGCTGGTGCAACCAAGAAGGGTAAGTCAGCTGGAAAAGATGGGAAGAAAGTGAAAGCACCAACAGTCTCCTCCATGTTGGCCAACATGGACCAGAAACCTGAAAATCCCAAGAATGCATCTTCCTCCAGTTCAAAGGCGAAAGGCGCTTCAAAACTTGCGTCCTATATTAATGATATTGATCTCCCTCCCTCTGATGATGAGGTGGAAGAGGAACAACAAACCAATCAGCAAAGGAGGTCAGAGGCTAAGACGCTTGATATATCCATGACAGAGAAAGAGTTAAAAAAGCGTGAAAAGAAGGACCTTCTTGCTGCCCATGCCGCCGAGCTGTCAAAGAAGGAGGCCCTGAGAGATGACCATGATGCTTTCACTGTTGTTATTGGAAGCAGGGTTTCAGTACTTGAAGGTGAAGATGCAGATGCTAATATCAAGGATATATCAATAGAAAGTTTTTCTGTGGCGGCTAGAGGAAAGGAGCTACTAAAGAATGCATCAGTGAAGATATCTCATGGGAAGAGATATGGTCTGGTTGGTCCAAATGGGATGGGGAAGTCTACCCTCCTGAAGCTTCTTGCTTGGAGGAAGATTCCAGTACCCAAAAACATTGATGTTCTTTTAGTTGAACAAGAGGTAGTTGGTGATGATAGAAGTGCTCTTGAAGCAGTTGTTTCAGCTAATGAACAACTTGTTAAGCTCCGAGAAGAGGTTGCGGCATTGCAAAGTTCAGAGGAAGAGGACAGTCATGATGATGATGAAGGAGAGAAGCTTGCTGAGTTGTACGATCAATTGCAGCTGATGGGATCGGATGCTGCTGAAGCCCAGGCTTCAAAGATTCTTGCCGGTTTGGGCTTTACAAAGGATATGCAAGGCCGTCCCACTAAGTCATTCAGTGGTGGTTGGAGAATGAGAATTTCATTAGCTAGGGCACTCTTTGTGCAACCAACTCTTTTGTTGCTTGATGAACCAACAAACCATCTCGACTTGAGGGCTGTTCTTTGGTTGGAGGAGTACTTGTGCCGCTGGAAAAAAACTTTGGTGGTTGTCTCACATGATCGTGATTTCCTTAACACAGTGTGCACAGAGATCATTCATCTGCATGATCTGAAGCTCCACCCCTACCGTGGAAATTTTGATGATTTTGTAAAAGGGTATGAGCAGCGCCGCAAAGAGGTAAACAAAACGTTTGAGATTTATGATAAGCAGAAGAAAGCTGCCAGAAGGAGCGGAAGTCGGGTTCAACAGGAGAAGGTCAAGGACCGAGCAAAGTTGTTAGTTACTAAGGGCAAAGGAAAGGTTGACGAGGATGACACAAAAGTTGAGGCTCCTAAGAAGTGGAGGGATTACAGTGTGGAGTTCCACTTTCCTGAACCTACTGAGCTTACACCTCCACTCTTGCAACTTATTGATGTCAGTTTCAGTTATCCGAACCGGGAAGATTTCAGGCTGTCTGATGTTGATGTCGGTATTGATATGGGTACTCGTGTTGCCATTGTTGGACCTAATGGAGCCGGAAAGTCTACTCTGCTCAACCTTCTTGCGGGTGATTTGGTTCCTACTGAGGGTGAAGTTAGGAGGAGTCAGAAGTTGAGGATTGGTAGGTATTCACAGCACTTTGTGGACCTCCTGACAATGGACGAAACCCCAGTTTCATACCTTCTTCGTCTTCATCCTGACCAAGAGGGATTTAGCAAGCAGGAGGCTGTGCGTGCAAAACTTGGAAAGTACGGACTCCCTAGCCATAACCATCTGACTCCTATTGCAAAATTATCCGGGGGACAGAAAGCTCGAGTTGTCTTCACATCAATATCCATGTCAAAACCCCACATTCTGCTTTTGGATGAACCGACGAATCATTTAGATATGCAGAGCATTGATGCACTGGCTGATGCACTTGATGAATTCACCGGTGGGGTTGTACTGGTCAGTCATGACTCTAGACTTATATCAAGTGTGTGCAAGGATGAAGAGAAGAGTCAAATTTGGATTGTTGAAGATGGTACTGTGGTGAAATTTGATGGAAGTTTTAATGAGTACAAGGACGAGCTACAAAAAGAAATTAGAGCTGAGGTTGATGAGTAA

Protein Analysis

700

Amino Acids

78.02

Weight (kDa)

5.97

Isoelectric Point (pI)

37.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_tran PF00005 169 - 332 2.8e-25 ABC transporter
ABC_tran PF00005 490 - 625 8.6e-24 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1248
AccI GTMKAC 2 cut(s) 578, 1541
AciI CCGC 7 cut(s) 345, 485, 734, 1042, 1186, 1248, 1562
AclI AACGTT 1 cut(s) 1205
AclWI GGATC 1 cut(s) 832
AcoI YGGCCR 1 cut(s) 102
AcsI RAATTY 5 cut(s) 933, 1150, 1922, 2001, 2033
AcuI CTGAAG 3 cut(s) 608, 858, 1148
AdeI CACNNNGTG 2 cut(s) 1098, 1639
AfaI GTAC 9 cut(s) 423, 618, 803, 1034, 1501, 1748, 1941, 2023, 2057
AfiI CCNNNNNNNGG 6 cut(s) 727, 1145, 1192, 1561, 1583, 1654
AgeI ACCGGT 1 cut(s) 1928
AgsI TTSAA 8 cut(s) 156, 174, 428, 647, 683, 852, 1262, 2015
AjnI CCWGG 1 cut(s) 843
AjuI GAANNNNNNNTTGG 2 cut(s) 1040, 1072
AloI GAACNNNNNNTCC 2 cut(s) 1242, 1274
Alw21I GWGCWC 2 cut(s) 679, 1103
Alw26I GTCTC 2 cut(s) 94, 1072
Alw44I GTGCAC 1 cut(s) 1099
AlwI GGATC 1 cut(s) 832
Ama87I CYCGRG 1 cut(s) 1809
AoxI GGCC 3 cut(s) 102, 366, 892
ApaLI GTGCAC 1 cut(s) 1099
ApeKI GCWGC 5 cut(s) 335, 814, 833, 1180, 1235
ApoI RAATTY 5 cut(s) 933, 1150, 1922, 2001, 2033
ArsI GACNNNNNNTTYG 2 cut(s) 167, 199
AseI ATTAAT 1 cut(s) 192
AsiGI ACCGGT 1 cut(s) 1928
AspLEI GCGC 2 cut(s) 170, 1185
AspS9I GGNCC 7 cut(s) 112, 325, 367, 557, 1279, 1520, 1642
AsuC2I CCSGG 2 cut(s) 1454, 1795
AsuHPI GGTGA 6 cut(s) 443, 674, 1577, 1598, 1918, 2041
AvaI CYCGRG 1 cut(s) 1809
AvaII GGWCC 6 cut(s) 112, 325, 557, 1279, 1520, 1642
BaeGI GKGCMC 2 cut(s) 952, 1103
BaeI ACNNNNGTAYC 4 cut(s) 1491, 1524, 2013, 2046
BalI TGGCCA 1 cut(s) 104
BauI CACGAG 1 cut(s) 1503
BbsI GAAGAC 3 cut(s) 20, 1679, 1810
Bbv12I GWGCWC 2 cut(s) 679, 1103
BbvCI CCTCAGC 1 cut(s) 2088
BbvI GCAGC 5 cut(s) 322, 820, 826, 1192, 1222
BccI CCATC 7 cut(s) 56, 562, 814, 1005, 1776, 2012, 2033
BceAI ACGGC 1 cut(s) 879
BciT130I CCWGG 1 cut(s) 845
BcnI CCSGG 2 cut(s) 1454, 1795
BcoDI GTCTC 2 cut(s) 94, 1072
BfaI CTAG 4 cut(s) 489, 945, 1758, 1959
BfoI RGCGCY 2 cut(s) 171, 1186
BmcAI AGTACT 2 cut(s) 423, 1034
Bme1390I CCNGG 3 cut(s) 845, 1454, 1795
Bme18I GGWCC 6 cut(s) 112, 325, 557, 1279, 1520, 1642
BmeT110I CYCGRG 1 cut(s) 1809
BmgT120I GGNCC 7 cut(s) 112, 325, 367, 557, 1279, 1520, 1642
BmiI GGNNCC 3 cut(s) 1347, 1531, 1575
BmrFI CCNGG 3 cut(s) 845, 1454, 1795
BmrI ACTGGG 1 cut(s) 1661
BmsI GCATC 8 cut(s) 149, 376, 427, 433, 524, 820, 1888, 1900
BmuI ACTGGG 1 cut(s) 1661
BpiI GAAGAC 3 cut(s) 20, 1679, 1810
BpmI CTGGAG 1 cut(s) 133
Bpu10I CCTNAGC 1 cut(s) 2088
BpuEI CTTGAG 1 cut(s) 1027
BpuMI CCSGG 2 cut(s) 1454, 1795
BsaBI GATNNNNATC 1 cut(s) 201
BsaJI CCNNGG 3 cut(s) 843, 1144, 1794
BsaWI WCCGGW 1 cut(s) 1928
BsaXI ACNNNNNCTCC 4 cut(s) 1022, 1052, 1237, 1267
Bsc4I CCNNNNNNNGG 6 cut(s) 727, 1145, 1192, 1561, 1583, 1654
Bse118I RCCGGY 2 cut(s) 863, 1928
Bse1I ACTGG 5 cut(s) 150, 614, 1667, 1908, 1947
Bse3DI GCAATG 1 cut(s) 737
Bse8I GATNNNNATC 1 cut(s) 201
BseBI CCWGG 1 cut(s) 845
BseDI CCNNGG 3 cut(s) 843, 1144, 1794
BseGI GGATG 6 cut(s) 573, 835, 1333, 1690, 1867, 1990
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 6 cut(s) 727, 1145, 1192, 1561, 1583, 1654
BseMI GCAATG 1 cut(s) 737
BseMII CTCAG 5 cut(s) 362, 786, 1389, 1572, 2079
BseNI ACTGG 5 cut(s) 150, 614, 1667, 1908, 1947
BseRI GAGGAG 3 cut(s) 82, 1043, 1612
BseSI GKGCMC 2 cut(s) 952, 1103
BseXI GCAGC 5 cut(s) 322, 820, 826, 1192, 1222
BshFI GGCC 3 cut(s) 104, 368, 894
BshTI ACCGGT 1 cut(s) 1928
BsiHKAI GWGCWC 2 cut(s) 679, 1103
BsiHKCI CYCGRG 1 cut(s) 1809
BsiSI CCGG 5 cut(s) 864, 1453, 1533, 1794, 1929
BslFI GGGAC 2 cut(s) 882, 1812
BslI CCNNNNNNNGG 6 cut(s) 727, 1145, 1192, 1561, 1583, 1654
BsmAI GTCTC 2 cut(s) 94, 1072
BsmFI GGGAC 2 cut(s) 882, 1812
BsmI GAATGC 2 cut(s) 142, 517
BsnI GGCC 3 cut(s) 104, 368, 894
BsoBI CYCGRG 1 cut(s) 1809
Bsp1286I GDGCHC 3 cut(s) 679, 952, 1103
Bsp143I GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
BspACI CCGC 7 cut(s) 345, 485, 734, 1042, 1186, 1248, 1562
BspANI GGCC 3 cut(s) 104, 368, 894
BspCNI CTCAG 5 cut(s) 363, 787, 1390, 1573, 2080
BspHI TCATGA 2 cut(s) 766, 1951
BspLI GGNNCC 3 cut(s) 1347, 1531, 1575
BspPI GGATC 1 cut(s) 832
BsrBI CCGCTC 1 cut(s) 1248
BsrDI GCAATG 1 cut(s) 737
BsrFI RCCGGY 2 cut(s) 863, 1928
BsrI ACTGG 5 cut(s) 150, 614, 1667, 1908, 1947
BssAI RCCGGY 2 cut(s) 863, 1928
BssECI CCNNGG 3 cut(s) 843, 1144, 1794
BssMI GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
BssSI CACGAG 1 cut(s) 1503
Bst2BI CACGAG 1 cut(s) 1503
Bst2UI CCWGG 1 cut(s) 845
Bst4CI ACNGT 7 cut(s) 88, 397, 764, 1096, 1145, 1370, 2026
Bst6I CTCTTC 6 cut(s) 225, 533, 720, 750, 1983, 1988
BstC8I GCNNGC 3 cut(s) 792, 1715, 1731
BstDEI CTNAG 9 cut(s) 270, 371, 795, 903, 1302, 1350, 1398, 1581, 2088
BstDSI CCRYGG 1 cut(s) 1144
BstF5I GGATG 6 cut(s) 573, 835, 1333, 1690, 1867, 1990
BstH2I RGCGCY 2 cut(s) 171, 1186
BstHHI GCGC 2 cut(s) 170, 1185
BstKTI GATC 6 cut(s) 205, 808, 827, 1078, 1110, 1126
BstMAI GTCTC 2 cut(s) 94, 1072
BstMBI GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
BstMWI GCNNNNNNNGC 6 cut(s) 167, 341, 344, 683, 839, 1730
BstNI CCWGG 1 cut(s) 845
BstSCI CCNGG 3 cut(s) 843, 1452, 1793
BstSLI GKGCMC 2 cut(s) 952, 1103
BstV1I GCAGC 5 cut(s) 322, 820, 826, 1192, 1222
BstV2I GAAGAC 3 cut(s) 20, 1679, 1810
BsuRI GGCC 3 cut(s) 104, 368, 894
BtgI CCRYGG 1 cut(s) 1144
BtsCI GGATG 6 cut(s) 573, 835, 1333, 1690, 1867, 1990
BtsIMutI CAGTG 6 cut(s) 393, 525, 919, 1101, 1375, 1901
Cac8I GCNNGC 3 cut(s) 792, 1715, 1731
CciI TCATGA 2 cut(s) 766, 1951
CfoI GCGC 2 cut(s) 170, 1185
Cfr10I RCCGGY 2 cut(s) 863, 1928
Cfr13I GGNCC 7 cut(s) 112, 325, 367, 557, 1279, 1520, 1642
CseI GACGC 2 cut(s) 171, 283
Csp6I GTAC 9 cut(s) 422, 617, 802, 1033, 1500, 1747, 1940, 2022, 2056
CspAI ACCGGT 1 cut(s) 1928
CviQI GTAC 9 cut(s) 422, 617, 802, 1033, 1500, 1747, 1940, 2022, 2056
DdeI CTNAG 9 cut(s) 270, 371, 795, 903, 1302, 1350, 1398, 1581, 2088
DpnI GATC 6 cut(s) 204, 807, 826, 1077, 1109, 1125
DpnII GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
DraIII CACNNNGTG 2 cut(s) 1098, 1639
EaeI YGGCCR 1 cut(s) 102
Eam1104I CTCTTC 6 cut(s) 225, 533, 720, 750, 1983, 1988
EarI CTCTTC 6 cut(s) 225, 533, 720, 750, 1983, 1988
Eco32I GATATC 1 cut(s) 528
Eco47I GGWCC 6 cut(s) 112, 325, 557, 1279, 1520, 1642
Eco57I CTGAAG 3 cut(s) 608, 858, 1148
Eco88I CYCGRG 1 cut(s) 1809
EcoO109I RGGNCCY 2 cut(s) 325, 367
EcoRI GAATTC 1 cut(s) 1922
EcoRII CCWGG 1 cut(s) 843
EcoRV GATATC 1 cut(s) 528
EcoT22I ATGCAT 2 cut(s) 142, 517
FaqI GGGAC 2 cut(s) 882, 1812
FauI CCCGC 1 cut(s) 1555
FblI GTMKAC 2 cut(s) 578, 1541
FokI GGATG 6 cut(s) 580, 842, 1340, 1677, 1874, 1997
FspBI CTAG 4 cut(s) 489, 945, 1758, 1959
GlaI GCGC 2 cut(s) 169, 1184
GsuI CTGGAG 1 cut(s) 133
HaeII RGCGCY 2 cut(s) 171, 1186
HaeIII GGCC 3 cut(s) 104, 368, 894
HapII CCGG 5 cut(s) 864, 1453, 1533, 1794, 1929
HgaI GACGC 2 cut(s) 171, 283
HhaI GCGC 2 cut(s) 170, 1185
Hin6I GCGC 2 cut(s) 168, 1183
HinP1I GCGC 2 cut(s) 168, 1183
HincII GTYRAC 1 cut(s) 1321
HindII GTYRAC 1 cut(s) 1321
HindIII AAGCTT 2 cut(s) 590, 788
HinfI GANTC 8 cut(s) 610, 856, 1600, 1752, 1774, 1873, 1955, 1996
HpaII CCGG 5 cut(s) 864, 1453, 1533, 1794, 1929
HphI GGTGA 6 cut(s) 443, 674, 1577, 1598, 1918, 2041
Hpy166II GTNNAC 6 cut(s) 579, 1101, 1198, 1321, 1542, 1642
Hpy8I GTNNAC 6 cut(s) 579, 1101, 1198, 1321, 1542, 1642
Hpy99I CGWCG 1 cut(s) 1873
HpyCH4III ACNGT 7 cut(s) 88, 397, 764, 1096, 1145, 1370, 2026
HpyCH4IV ACGT 1 cut(s) 1205
HpyF10VI GCNNNNNNNGC 6 cut(s) 167, 341, 344, 683, 839, 1730
HpyF3I CTNAG 9 cut(s) 270, 371, 795, 903, 1302, 1350, 1398, 1581, 2088
HpySE526I ACGT 1 cut(s) 1205
HspAI GCGC 2 cut(s) 168, 1183
Kzo9I GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
LmnI GCTCC 6 cut(s) 499, 723, 1137, 1245, 1351, 1529
Lsp1109I GCAGC 5 cut(s) 322, 820, 826, 1192, 1222
LweI GCATC 8 cut(s) 149, 376, 427, 433, 524, 820, 1888, 1900
MaeI CTAG 4 cut(s) 489, 945, 1758, 1959
MaeII ACGT 1 cut(s) 1205
MaeIII GTNAC 1 cut(s) 1297
MalI GATC 6 cut(s) 204, 807, 826, 1077, 1109, 1125
MbiI CCGCTC 1 cut(s) 1248
MboI GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
MfeI CAATTG 1 cut(s) 809
MhlI GDGCHC 3 cut(s) 679, 952, 1103
MlsI TGGCCA 1 cut(s) 104
MluCI AATT 8 cut(s) 809, 933, 1150, 1787, 1922, 2001, 2033, 2079
MluNI TGGCCA 1 cut(s) 104
MlyI GAGTC 5 cut(s) 1609, 1746, 1768, 1949, 2005
MmeI TCCRAC 3 cut(s) 902, 1005, 1498
Mox20I TGGCCA 1 cut(s) 104
Mph1103I ATGCAT 2 cut(s) 142, 517
MscI TGGCCA 1 cut(s) 104
MseI TTAA 5 cut(s) 192, 305, 714, 1089, 2049
MslI CAYNNNNRTG 3 cut(s) 771, 1077, 1119
Msp20I TGGCCA 1 cut(s) 104
MspA1I CMGCKG 3 cut(s) 53, 817, 1044
MspI CCGG 5 cut(s) 864, 1453, 1533, 1794, 1929
MspR9I CCNGG 3 cut(s) 845, 1454, 1795
MunI CAATTG 1 cut(s) 809
Mva1269I GAATGC 2 cut(s) 142, 517
MvaI CCWGG 1 cut(s) 845
MwoI GCNNNNNNNGC 6 cut(s) 167, 341, 344, 683, 839, 1730
NciI CCSGG 2 cut(s) 1454, 1795
NdeII GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
NlaIV GGNNCC 3 cut(s) 1347, 1531, 1575
NmeAIII GCCGAG 1 cut(s) 373
NsiI ATGCAT 2 cut(s) 142, 517
PaeR7I CTCGAG 1 cut(s) 1809
PagI TCATGA 2 cut(s) 766, 1951
PctI GAATGC 2 cut(s) 142, 517
PfeI GAWTC 3 cut(s) 610, 856, 1873
PinAI ACCGGT 1 cut(s) 1928
PleI GAGTC 5 cut(s) 1608, 1746, 1768, 1949, 2004
PpsI GAGTC 5 cut(s) 1608, 1746, 1768, 1949, 2004
PpuMI RGGWCCY 1 cut(s) 325
PshBI ATTAAT 1 cut(s) 192
Psp1406I AACGTT 1 cut(s) 1205
Psp5II RGGWCCY 1 cut(s) 325
Psp6I CCWGG 1 cut(s) 843
PspGI CCWGG 1 cut(s) 843
PspN4I GGNNCC 3 cut(s) 1347, 1531, 1575
PspPI GGNCC 7 cut(s) 112, 325, 367, 557, 1279, 1520, 1642
PspPPI RGGWCCY 1 cut(s) 325
PspXI VCTCGAGB 1 cut(s) 1809
PvuII CAGCTG 2 cut(s) 53, 817
RsaI GTAC 9 cut(s) 423, 618, 803, 1034, 1501, 1748, 1941, 2023, 2057
RsaNI GTAC 9 cut(s) 422, 617, 802, 1033, 1500, 1747, 1940, 2022, 2056
RseI CAYNNNNRTG 3 cut(s) 771, 1077, 1119
SaqAI TTAA 5 cut(s) 192, 305, 714, 1089, 2049
Sau3AI GATC 6 cut(s) 202, 805, 824, 1075, 1107, 1123
Sau96I GGNCC 7 cut(s) 112, 325, 367, 557, 1279, 1520, 1642
ScaI AGTACT 2 cut(s) 423, 1034
SchI GAGTC 5 cut(s) 1609, 1746, 1768, 1949, 2005
ScrFI CCNGG 3 cut(s) 845, 1454, 1795
SduI GDGCHC 3 cut(s) 679, 952, 1103
SfaNI GCATC 8 cut(s) 149, 376, 427, 433, 524, 820, 1888, 1900
Sfr274I CTCGAG 1 cut(s) 1809
SgrAI CRCCGGYG 1 cut(s) 1928
SinI GGWCC 6 cut(s) 112, 325, 557, 1279, 1520, 1642
SlaI CTCGAG 1 cut(s) 1809
SmiMI CAYNNNNRTG 3 cut(s) 771, 1077, 1119
SmlI CTYRAG 2 cut(s) 1006, 1809
SmoI CTYRAG 2 cut(s) 1006, 1809
Sse9I AATT 8 cut(s) 809, 933, 1150, 1787, 1922, 2001, 2033, 2079
SsiI CCGC 7 cut(s) 345, 485, 734, 1042, 1186, 1248, 1562
SspMI CTAG 4 cut(s) 489, 945, 1758, 1959
StyD4I CCNGG 3 cut(s) 843, 1452, 1793
TaaI ACNGT 7 cut(s) 88, 397, 764, 1096, 1145, 1370, 2026
TaiI ACGT 1 cut(s) 1208
TaqI TCGA 2 cut(s) 1002, 1810
TaqII GACCGA 1 cut(s) 1296
TasI AATT 8 cut(s) 809, 933, 1150, 1787, 1922, 2001, 2033, 2079
TatI WGTACW 4 cut(s) 421, 1032, 1939, 2055
TauI GCSGC 5 cut(s) 347, 488, 737, 1044, 1188
TfiI GAWTC 3 cut(s) 610, 856, 1873
Tru1I TTAA 5 cut(s) 192, 305, 714, 1089, 2049
Tru9I TTAA 5 cut(s) 192, 305, 714, 1089, 2049
TscAI CASTG 6 cut(s) 400, 525, 919, 1101, 1375, 1908
TseI GCWGC 5 cut(s) 335, 814, 833, 1180, 1235
TspGWI ACGGA 1 cut(s) 1764
TspRI CASTG 6 cut(s) 400, 525, 919, 1101, 1375, 1908
VneI GTGCAC 1 cut(s) 1099
VpaK11BI GGWCC 6 cut(s) 112, 325, 557, 1279, 1520, 1642
VspI ATTAAT 1 cut(s) 192
XapI RAATTY 5 cut(s) 933, 1150, 1922, 2001, 2033
XbaI TCTAGA 1 cut(s) 1958
XcmI CCANNNNNNNNNTGG 1 cut(s) 1142
XhoI CTCGAG 1 cut(s) 1809
XmiI GTMKAC 2 cut(s) 578, 1541
XspI CTAG 4 cut(s) 489, 945, 1758, 1959
ZrmI AGTACT 2 cut(s) 423, 1034
Zsp2I ATGCAT 2 cut(s) 142, 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.