Glutamate-gated receptor that probably acts as non- selective cation channel
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ANF_receptor | PF01094 | 71 - 416 | 2e-81 | Receptor family ligand binding region |
| Peripla_BP_6 | PF13458 | 95 - 373 | 1.4e-20 | Periplasmic binding protein |
| Lig_chan-Glu_bd | PF10613 | 499 - 587 | 8.7e-09 | Ligated ion channel L-glutamate- and glycine-binding site |
| Lig_chan | PF00060 | 604 - 741 | 1.8e-29 | Ligand-gated ion channel |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1500 |
| AccB1I | GGYRCC | 1 cut(s) | 245 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1863 |
| AccI | GTMKAC | 2 cut(s) | 1566, 1641 |
| AccII | CGCG | 2 cut(s) | 251, 1134 |
| AccIII | TCCGGA | 2 cut(s) | 576, 1819 |
| AciI | CCGC | 9 cut(s) | 249, 951, 959, 1132, 1134, 1313, 1595, 1835, 2120 |
| AclWI | GGATC | 9 cut(s) | 585, 751, 764, 1333, 1412, 1425, 2326, 2423, 2441 |
| AcoI | YGGCCR | 2 cut(s) | 343, 2331 |
| AcsI | RAATTY | 2 cut(s) | 56, 2542 |
| AcyI | GRCGYC | 1 cut(s) | 1497 |
| AfaI | GTAC | 7 cut(s) | 434, 686, 1577, 1789, 1855, 1946, 2582 |
| AfeI | AGCGCT | 1 cut(s) | 1261 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 907, 1348, 1349, 1863, 2189, 2590 |
| AflII | CTTAAG | 2 cut(s) | 641, 784 |
| AflIII | ACRYGT | 2 cut(s) | 156, 681 |
| AjnI | CCWGG | 4 cut(s) | 742, 1303, 1929, 2571 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 281, 313, 382, 414 |
| AleI | CACNNNNGTG | 1 cut(s) | 665 |
| Alw21I | GWGCWC | 1 cut(s) | 2388 |
| Alw26I | GTCTC | 8 cut(s) | 191, 794, 1504, 1704, 2203, 2224, 2373, 2664 |
| AlwI | GGATC | 9 cut(s) | 585, 751, 764, 1333, 1412, 1425, 2326, 2423, 2441 |
| Ama87I | CYCGRG | 3 cut(s) | 354, 1580, 2387 |
| Aor13HI | TCCGGA | 2 cut(s) | 576, 1819 |
| Aor51HI | AGCGCT | 1 cut(s) | 1261 |
| AoxI | GGCC | 6 cut(s) | 302, 343, 1301, 1926, 2331, 2346 |
| ApaI | GGGCCC | 1 cut(s) | 1930 |
| ApeKI | GCWGC | 2 cut(s) | 257, 2473 |
| ApoI | RAATTY | 2 cut(s) | 56, 2542 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 75, 107, 506, 538 |
| AseI | ATTAAT | 1 cut(s) | 570 |
| AspLEI | GCGC | 1 cut(s) | 1262 |
| AspS9I | GGNCC | 8 cut(s) | 6, 302, 1064, 1832, 1926, 1927, 2180, 2346 |
| AsuC2I | CCSGG | 2 cut(s) | 355, 356 |
| AsuHPI | GGTGA | 5 cut(s) | 233, 539, 1633, 2313, 2455 |
| AsuII | TTCGAA | 1 cut(s) | 1521 |
| AvaI | CYCGRG | 3 cut(s) | 354, 1580, 2387 |
| AvaII | GGWCC | 4 cut(s) | 6, 1064, 1832, 2180 |
| BaeGI | GKGCMC | 2 cut(s) | 1930, 2139 |
| BalI | TGGCCA | 1 cut(s) | 345 |
| BamHI | GGATCC | 2 cut(s) | 756, 1417 |
| BanI | GGYRCC | 1 cut(s) | 245 |
| BanII | GRGCYC | 2 cut(s) | 1930, 2388 |
| BauI | CACGAG | 1 cut(s) | 1958 |
| BbsI | GAAGAC | 4 cut(s) | 31, 444, 1623, 2648 |
| Bbv12I | GWGCWC | 1 cut(s) | 2388 |
| BbvI | GCAGC | 2 cut(s) | 269, 2485 |
| BccI | CCATC | 9 cut(s) | 476, 480, 730, 879, 1156, 1326, 1865, 2285, 2357 |
| BceAI | ACGGC | 2 cut(s) | 94, 819 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 16, 50 |
| BciT130I | CCWGG | 4 cut(s) | 744, 1305, 1931, 2573 |
| BciVI | GTATCC | 2 cut(s) | 573, 1006 |
| BclI | TGATCA | 2 cut(s) | 616, 1237 |
| BcnI | CCSGG | 2 cut(s) | 355, 356 |
| BcoDI | GTCTC | 8 cut(s) | 191, 794, 1504, 1704, 2203, 2224, 2373, 2664 |
| BfaI | CTAG | 8 cut(s) | 89, 956, 1839, 1851, 2127, 2327, 2469, 2561 |
| BfmI | CTRYAG | 2 cut(s) | 1437, 2148 |
| BfoI | RGCGCY | 1 cut(s) | 1263 |
| BfrI | CTTAAG | 2 cut(s) | 641, 784 |
| BfuI | GTATCC | 2 cut(s) | 573, 1006 |
| BglII | AGATCT | 2 cut(s) | 862, 878 |
| BisI | GCNGC | 3 cut(s) | 249, 258, 2474 |
| BlsI | GCNGC | 3 cut(s) | 250, 259, 2475 |
| Bme1390I | CCNGG | 6 cut(s) | 355, 356, 744, 1305, 1931, 2573 |
| Bme18I | GGWCC | 4 cut(s) | 6, 1064, 1832, 2180 |
| BmeT110I | CYCGRG | 3 cut(s) | 354, 1580, 2387 |
| BmgT120I | GGNCC | 8 cut(s) | 6, 302, 1064, 1832, 1926, 1927, 2180, 2346 |
| BmiI | GGNNCC | 7 cut(s) | 247, 303, 360, 741, 758, 1419, 1928 |
| BmrFI | CCNGG | 6 cut(s) | 355, 356, 744, 1305, 1931, 2573 |
| BmrI | ACTGGG | 2 cut(s) | 184, 1694 |
| BmsI | GCATC | 6 cut(s) | 36, 159, 544, 931, 1582, 2000 |
| BmuI | ACTGGG | 2 cut(s) | 184, 1694 |
| BpiI | GAAGAC | 4 cut(s) | 31, 444, 1623, 2648 |
| BpmI | CTGGAG | 2 cut(s) | 1326, 2223 |
| Bpu14I | TTCGAA | 1 cut(s) | 1521 |
| BpuEI | CTTGAG | 4 cut(s) | 685, 887, 2248, 2646 |
| BpuMI | CCSGG | 2 cut(s) | 355, 356 |
| Bsa29I | ATCGAT | 1 cut(s) | 777 |
| BsaAI | YACGTR | 2 cut(s) | 425, 432 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2451 |
| BsaHI | GRCGYC | 1 cut(s) | 1497 |
| BsaJI | CCNNGG | 9 cut(s) | 305, 354, 630, 902, 1132, 1579, 1881, 1929, 2092 |
| BsaWI | WCCGGW | 3 cut(s) | 576, 1181, 1819 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 425, 455, 2049, 2079 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 907, 1348, 1349, 1863, 2189, 2590 |
| Bse118I | RCCGGY | 2 cut(s) | 1385, 1544 |
| Bse1I | ACTGG | 3 cut(s) | 190, 503, 1700 |
| Bse3DI | GCAATG | 1 cut(s) | 2385 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2451 |
| BseAI | TCCGGA | 2 cut(s) | 576, 1819 |
| BseBI | CCWGG | 4 cut(s) | 744, 1305, 1931, 2573 |
| BseCI | ATCGAT | 1 cut(s) | 777 |
| BseDI | CCNNGG | 9 cut(s) | 305, 354, 630, 902, 1132, 1579, 1881, 1929, 2092 |
| BseGI | GGATG | 4 cut(s) | 491, 1337, 2081, 2088 |
| BseJI | GATNNNNATC | 1 cut(s) | 2451 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 907, 1348, 1349, 1863, 2189, 2590 |
| BseMI | GCAATG | 1 cut(s) | 2385 |
| BseMII | CTCAG | 2 cut(s) | 905, 1070 |
| BseNI | ACTGG | 3 cut(s) | 190, 503, 1700 |
| BseSI | GKGCMC | 2 cut(s) | 1930, 2139 |
| BseXI | GCAGC | 2 cut(s) | 269, 2485 |
| Bsh1236I | CGCG | 2 cut(s) | 251, 1134 |
| BshFI | GGCC | 6 cut(s) | 304, 345, 1303, 1928, 2333, 2348 |
| BshNI | GGYRCC | 1 cut(s) | 245 |
| BshVI | ATCGAT | 1 cut(s) | 777 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2388 |
| BsiHKCI | CYCGRG | 3 cut(s) | 354, 1580, 2387 |
| BsiSI | CCGG | 6 cut(s) | 355, 577, 1182, 1386, 1545, 1820 |
| BsiWI | CGTACG | 1 cut(s) | 432 |
| BslFI | GGGAC | 1 cut(s) | 337 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 907, 1348, 1349, 1863, 2189, 2590 |
| BsmAI | GTCTC | 8 cut(s) | 191, 794, 1504, 1704, 2203, 2224, 2373, 2664 |
| BsmBI | CGTCTC | 2 cut(s) | 794, 1504 |
| BsmFI | GGGAC | 1 cut(s) | 337 |
| BsnI | GGCC | 6 cut(s) | 304, 345, 1303, 1928, 2333, 2348 |
| BsoBI | CYCGRG | 3 cut(s) | 354, 1580, 2387 |
| Bsp119I | TTCGAA | 1 cut(s) | 1521 |
| Bsp120I | GGGCCC | 1 cut(s) | 1926 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1930, 2139, 2388 |
| Bsp13I | TCCGGA | 2 cut(s) | 576, 1819 |
| Bsp19I | CCATGG | 2 cut(s) | 305, 1881 |
| BspACI | CCGC | 9 cut(s) | 249, 951, 959, 1132, 1134, 1313, 1595, 1835, 2120 |
| BspANI | GGCC | 6 cut(s) | 304, 345, 1303, 1928, 2333, 2348 |
| BspCNI | CTCAG | 2 cut(s) | 906, 1069 |
| BspDI | ATCGAT | 1 cut(s) | 777 |
| BspEI | TCCGGA | 2 cut(s) | 576, 1819 |
| BspFNI | CGCG | 2 cut(s) | 251, 1134 |
| BspHI | TCATGA | 3 cut(s) | 619, 1725, 2668 |
| BspLI | GGNNCC | 7 cut(s) | 247, 303, 360, 741, 758, 1419, 1928 |
| BspMAI | CTGCAG | 1 cut(s) | 2152 |
| BspPI | GGATC | 9 cut(s) | 585, 751, 764, 1333, 1412, 1425, 2326, 2423, 2441 |
| BspT104I | TTCGAA | 1 cut(s) | 1521 |
| BspT107I | GGYRCC | 1 cut(s) | 245 |
| BspTI | CTTAAG | 2 cut(s) | 641, 784 |
| BsrDI | GCAATG | 1 cut(s) | 2385 |
| BsrFI | RCCGGY | 2 cut(s) | 1385, 1544 |
| BsrI | ACTGG | 3 cut(s) | 190, 503, 1700 |
| BssAI | RCCGGY | 2 cut(s) | 1385, 1544 |
| BssECI | CCNNGG | 9 cut(s) | 305, 354, 630, 902, 1132, 1579, 1881, 1929, 2092 |
| BssNI | GRCGYC | 1 cut(s) | 1497 |
| BssSI | CACGAG | 1 cut(s) | 1958 |
| BssT1I | CCWWGG | 3 cut(s) | 305, 1881, 2092 |
| Bst2BI | CACGAG | 1 cut(s) | 1958 |
| Bst2UI | CCWGG | 4 cut(s) | 744, 1305, 1931, 2573 |
| Bst4CI | ACNGT | 7 cut(s) | 1093, 1438, 1792, 2065, 2247, 2489, 2681 |
| Bst6I | CTCTTC | 1 cut(s) | 184 |
| BstACI | GRCGYC | 1 cut(s) | 1497 |
| BstAFI | CTTAAG | 2 cut(s) | 641, 784 |
| BstBAI | YACGTR | 2 cut(s) | 425, 432 |
| BstBI | TTCGAA | 1 cut(s) | 1521 |
| BstC8I | GCNNGC | 4 cut(s) | 321, 1136, 1245, 2394 |
| BstDEI | CTNAG | 4 cut(s) | 914, 1056, 1347, 2171 |
| BstDSI | CCRYGG | 5 cut(s) | 305, 630, 902, 1132, 1881 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2588 |
| BstF5I | GGATG | 4 cut(s) | 491, 1337, 2081, 2088 |
| BstFNI | CGCG | 2 cut(s) | 251, 1134 |
| BstH2I | RGCGCY | 1 cut(s) | 1263 |
| BstHHI | GCGC | 1 cut(s) | 1262 |
| BstMAI | GTCTC | 8 cut(s) | 191, 794, 1504, 1704, 2203, 2224, 2373, 2664 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 254, 257, 608, 812, 941, 950, 1988 |
| BstNI | CCWGG | 4 cut(s) | 744, 1305, 1931, 2573 |
| BstNSI | RCATGY | 3 cut(s) | 160, 658, 685 |
| BstSCI | CCNGG | 6 cut(s) | 353, 354, 742, 1303, 1929, 2571 |
| BstSFI | CTRYAG | 2 cut(s) | 1437, 2148 |
| BstSLI | GKGCMC | 2 cut(s) | 1930, 2139 |
| BstSNI | TACGTA | 1 cut(s) | 432 |
| BstUI | CGCG | 2 cut(s) | 251, 1134 |
| BstV1I | GCAGC | 2 cut(s) | 269, 2485 |
| BstV2I | GAAGAC | 4 cut(s) | 31, 444, 1623, 2648 |
| BstX2I | RGATCY | 7 cut(s) | 590, 756, 862, 878, 1338, 1417, 2446 |
| BstYI | RGATCY | 7 cut(s) | 590, 756, 862, 878, 1338, 1417, 2446 |
| Bsu15I | ATCGAT | 1 cut(s) | 777 |
| BsuI | GTATCC | 2 cut(s) | 573, 1006 |
| BsuRI | GGCC | 6 cut(s) | 304, 345, 1303, 1928, 2333, 2348 |
| BsuTUI | ATCGAT | 1 cut(s) | 777 |
| BtgI | CCRYGG | 5 cut(s) | 305, 630, 902, 1132, 1881 |
| BtgZI | GCGATG | 1 cut(s) | 1977 |
| BtsCI | GGATG | 4 cut(s) | 491, 1337, 2081, 2088 |
| BtsIMutI | CAGTG | 3 cut(s) | 612, 1392, 2070 |
| Cac8I | GCNNGC | 4 cut(s) | 321, 1136, 1245, 2394 |
| CciI | TCATGA | 3 cut(s) | 619, 1725, 2668 |
| CfoI | GCGC | 1 cut(s) | 1262 |
| Cfr10I | RCCGGY | 2 cut(s) | 1385, 1544 |
| Cfr13I | GGNCC | 8 cut(s) | 6, 302, 1064, 1832, 1926, 1927, 2180, 2346 |
| Cfr42I | CCGCGG | 1 cut(s) | 1135 |
| Cfr9I | CCCGGG | 1 cut(s) | 354 |
| ClaI | ATCGAT | 1 cut(s) | 777 |
| CsiI | ACCWGGT | 1 cut(s) | 2571 |
| Csp6I | GTAC | 7 cut(s) | 433, 685, 1576, 1788, 1854, 1945, 2581 |
| CviQI | GTAC | 7 cut(s) | 433, 685, 1576, 1788, 1854, 1945, 2581 |
| DdeI | CTNAG | 4 cut(s) | 914, 1056, 1347, 2171 |
| EaeI | YGGCCR | 2 cut(s) | 343, 2331 |
| Eam1104I | CTCTTC | 1 cut(s) | 184 |
| EarI | CTCTTC | 1 cut(s) | 184 |
| EciI | GGCGGA | 1 cut(s) | 1328 |
| Ecl136II | GAGCTC | 1 cut(s) | 2386 |
| Eco105I | TACGTA | 1 cut(s) | 432 |
| Eco130I | CCWWGG | 3 cut(s) | 305, 1881, 2092 |
| Eco24I | GRGCYC | 2 cut(s) | 1930, 2388 |
| Eco47I | GGWCC | 4 cut(s) | 6, 1064, 1832, 2180 |
| Eco47III | AGCGCT | 1 cut(s) | 1261 |
| Eco53kI | GAGCTC | 1 cut(s) | 2386 |
| Eco88I | CYCGRG | 3 cut(s) | 354, 1580, 2387 |
| EcoICRI | GAGCTC | 1 cut(s) | 2386 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2588 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1926, 1927 |
| EcoRI | GAATTC | 1 cut(s) | 56 |
| EcoRII | CCWGG | 4 cut(s) | 742, 1303, 1929, 2571 |
| EcoT14I | CCWWGG | 3 cut(s) | 305, 1881, 2092 |
| EcoT38I | GRGCYC | 2 cut(s) | 1930, 2388 |
| ErhI | CCWWGG | 3 cut(s) | 305, 1881, 2092 |
| Esp3I | CGTCTC | 2 cut(s) | 794, 1504 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 37, 1269, 1301, 2667 |
| FaqI | GGGAC | 1 cut(s) | 337 |
| FauI | CCCGC | 2 cut(s) | 1127, 2127 |
| FauNDI | CATATG | 1 cut(s) | 1504 |
| FbaI | TGATCA | 2 cut(s) | 616, 1237 |
| FblI | GTMKAC | 2 cut(s) | 1566, 1641 |
| Fnu4HI | GCNGC | 3 cut(s) | 249, 258, 2474 |
| FokI | GGATG | 4 cut(s) | 498, 1344, 2068, 2075 |
| FriOI | GRGCYC | 2 cut(s) | 1930, 2388 |
| Fsp4HI | GCNGC | 3 cut(s) | 249, 258, 2474 |
| FspBI | CTAG | 8 cut(s) | 89, 956, 1839, 1851, 2127, 2327, 2469, 2561 |
| GlaI | GCGC | 1 cut(s) | 1261 |
| GluI | GCNGC | 3 cut(s) | 249, 258, 2474 |
| GsuI | CTGGAG | 2 cut(s) | 1326, 2223 |
| HaeII | RGCGCY | 1 cut(s) | 1263 |
| HaeIII | GGCC | 6 cut(s) | 304, 345, 1303, 1928, 2333, 2348 |
| HapII | CCGG | 6 cut(s) | 355, 577, 1182, 1386, 1545, 1820 |
| HhaI | GCGC | 1 cut(s) | 1262 |
| Hin1I | GRCGYC | 1 cut(s) | 1497 |
| Hin6I | GCGC | 1 cut(s) | 1260 |
| HinP1I | GCGC | 1 cut(s) | 1260 |
| HincII | GTYRAC | 5 cut(s) | 214, 1642, 1755, 1965, 2621 |
| HindII | GTYRAC | 5 cut(s) | 214, 1642, 1755, 1965, 2621 |
| HindIII | AAGCTT | 3 cut(s) | 14, 1070, 2099 |
| HpaI | GTTAAC | 1 cut(s) | 1965 |
| HpaII | CCGG | 6 cut(s) | 355, 577, 1182, 1386, 1545, 1820 |
| HphI | GGTGA | 5 cut(s) | 233, 539, 1633, 2313, 2455 |
| Hpy188I | TCNGA | 7 cut(s) | 485, 1033, 1103, 1326, 1676, 2318, 2540 |
| Hpy99I | CGWCG | 2 cut(s) | 1535, 1643 |
| HpyAV | CCTTC | 8 cut(s) | 127, 283, 413, 524, 1201, 1882, 2095, 2290 |
| HpyCH4III | ACNGT | 7 cut(s) | 1093, 1438, 1792, 2065, 2247, 2489, 2681 |
| HpyCH4IV | ACGT | 6 cut(s) | 216, 237, 424, 431, 1497, 1638 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 254, 257, 608, 812, 941, 950, 1988 |
| HpyF3I | CTNAG | 4 cut(s) | 914, 1056, 1347, 2171 |
| HpySE526I | ACGT | 6 cut(s) | 216, 237, 424, 431, 1497, 1638 |
| Hsp92I | GRCGYC | 1 cut(s) | 1497 |
| HspAI | GCGC | 1 cut(s) | 1260 |
| Kpn2I | TCCGGA | 2 cut(s) | 576, 1819 |
| Ksp22I | TGATCA | 2 cut(s) | 616, 1237 |
| KspAI | GTTAAC | 1 cut(s) | 1965 |
| KspI | CCGCGG | 1 cut(s) | 1135 |
| LmnI | GCTCC | 5 cut(s) | 634, 910, 1897, 2204, 2383 |
| Lsp1109I | GCAGC | 2 cut(s) | 269, 2485 |
| LweI | GCATC | 6 cut(s) | 36, 159, 544, 931, 1582, 2000 |
| MabI | ACCWGGT | 1 cut(s) | 2571 |
| MaeI | CTAG | 8 cut(s) | 89, 956, 1839, 1851, 2127, 2327, 2469, 2561 |
| MaeII | ACGT | 6 cut(s) | 216, 237, 424, 431, 1497, 1638 |
| MaeIII | GTNAC | 7 cut(s) | 106, 221, 233, 1408, 1441, 1973, 2514 |
| MflI | RGATCY | 7 cut(s) | 590, 756, 862, 878, 1338, 1417, 2446 |
| MhlI | GDGCHC | 3 cut(s) | 1930, 2139, 2388 |
| MlsI | TGGCCA | 1 cut(s) | 345 |
| MluCI | AATT | 9 cut(s) | 56, 390, 476, 1429, 1549, 2012, 2433, 2542, 2648 |
| MluNI | TGGCCA | 1 cut(s) | 345 |
| MlyI | GAGTC | 5 cut(s) | 218, 434, 2226, 2375, 2611 |
| MmeI | TCCRAC | 2 cut(s) | 1654, 2045 |
| Mox20I | TGGCCA | 1 cut(s) | 345 |
| MroI | TCCGGA | 2 cut(s) | 576, 1819 |
| MscI | TGGCCA | 1 cut(s) | 345 |
| MslI | CAYNNNNRTG | 3 cut(s) | 155, 665, 1619 |
| Msp20I | TGGCCA | 1 cut(s) | 345 |
| MspA1I | CMGCKG | 1 cut(s) | 1134 |
| MspCI | CTTAAG | 2 cut(s) | 641, 784 |
| MspI | CCGG | 6 cut(s) | 355, 577, 1182, 1386, 1545, 1820 |
| MspR9I | CCNGG | 6 cut(s) | 355, 356, 744, 1305, 1931, 2573 |
| MvaI | CCWGG | 4 cut(s) | 744, 1305, 1931, 2573 |
| MvnI | CGCG | 2 cut(s) | 251, 1134 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 254, 257, 608, 812, 941, 950, 1988 |
| NciI | CCSGG | 2 cut(s) | 355, 356 |
| NcoI | CCATGG | 2 cut(s) | 305, 1881 |
| NdeI | CATATG | 1 cut(s) | 1504 |
| NlaIV | GGNNCC | 7 cut(s) | 247, 303, 360, 741, 758, 1419, 1928 |
| NmuCI | GTSAC | 4 cut(s) | 221, 233, 1408, 1441 |
| NspI | RCATGY | 3 cut(s) | 160, 658, 685 |
| NspV | TTCGAA | 1 cut(s) | 1521 |
| OliI | CACNNNNGTG | 1 cut(s) | 665 |
| PaeR7I | CTCGAG | 1 cut(s) | 2387 |
| PagI | TCATGA | 3 cut(s) | 619, 1725, 2668 |
| PciI | ACATGT | 2 cut(s) | 156, 681 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1527, 1680 |
| PfeI | GAWTC | 5 cut(s) | 705, 1316, 1477, 1842, 2295 |
| Pfl23II | CGTACG | 1 cut(s) | 432 |
| PflFI | GACNNNGTC | 1 cut(s) | 1562 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1863 |
| PkrI | GCNGC | 3 cut(s) | 250, 259, 2475 |
| PleI | GAGTC | 5 cut(s) | 218, 434, 2226, 2374, 2610 |
| PpsI | GAGTC | 5 cut(s) | 218, 434, 2226, 2374, 2610 |
| Ppu21I | YACGTR | 2 cut(s) | 425, 432 |
| PscI | ACATGT | 2 cut(s) | 156, 681 |
| PshBI | ATTAAT | 1 cut(s) | 570 |
| Psp124BI | GAGCTC | 1 cut(s) | 2388 |
| Psp6I | CCWGG | 4 cut(s) | 742, 1303, 1929, 2571 |
| PspGI | CCWGG | 4 cut(s) | 742, 1303, 1929, 2571 |
| PspLI | CGTACG | 1 cut(s) | 432 |
| PspN4I | GGNNCC | 7 cut(s) | 247, 303, 360, 741, 758, 1419, 1928 |
| PspOMI | GGGCCC | 1 cut(s) | 1926 |
| PspPI | GGNCC | 8 cut(s) | 6, 302, 1064, 1832, 1926, 1927, 2180, 2346 |
| PspXI | VCTCGAGB | 1 cut(s) | 2387 |
| PstI | CTGCAG | 1 cut(s) | 2152 |
| PsuI | RGATCY | 7 cut(s) | 590, 756, 862, 878, 1338, 1417, 2446 |
| PsyI | GACNNNGTC | 1 cut(s) | 1562 |
| RsaI | GTAC | 7 cut(s) | 434, 686, 1577, 1789, 1855, 1946, 2582 |
| RsaNI | GTAC | 7 cut(s) | 433, 685, 1576, 1788, 1854, 1945, 2581 |
| RseI | CAYNNNNRTG | 3 cut(s) | 155, 665, 1619 |
| SacI | GAGCTC | 1 cut(s) | 2388 |
| SacII | CCGCGG | 1 cut(s) | 1135 |
| SalI | GTCGAC | 1 cut(s) | 1640 |
| SatI | GCNGC | 3 cut(s) | 249, 258, 2474 |
| Sau96I | GGNCC | 8 cut(s) | 6, 302, 1064, 1832, 1926, 1927, 2180, 2346 |
| SchI | GAGTC | 5 cut(s) | 218, 434, 2226, 2375, 2611 |
| ScrFI | CCNGG | 6 cut(s) | 355, 356, 744, 1305, 1931, 2573 |
| SduI | GDGCHC | 3 cut(s) | 1930, 2139, 2388 |
| SexAI | ACCWGGT | 1 cut(s) | 2571 |
| SfaNI | GCATC | 6 cut(s) | 36, 159, 544, 931, 1582, 2000 |
| SfcI | CTRYAG | 2 cut(s) | 1437, 2148 |
| Sfr274I | CTCGAG | 1 cut(s) | 2387 |
| Sfr303I | CCGCGG | 1 cut(s) | 1135 |
| SfuI | TTCGAA | 1 cut(s) | 1521 |
| SgrBI | CCGCGG | 1 cut(s) | 1135 |
| SinI | GGWCC | 4 cut(s) | 6, 1064, 1832, 2180 |
| SlaI | CTCGAG | 1 cut(s) | 2387 |
| SmaI | CCCGGG | 1 cut(s) | 356 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 155, 665, 1619 |
| SmlI | CTYRAG | 7 cut(s) | 641, 700, 784, 866, 2227, 2387, 2661 |
| SmoI | CTYRAG | 7 cut(s) | 641, 700, 784, 866, 2227, 2387, 2661 |
| SnaBI | TACGTA | 1 cut(s) | 432 |
| Sse9I | AATT | 9 cut(s) | 56, 390, 476, 1429, 1549, 2012, 2433, 2542, 2648 |
| SsiI | CCGC | 9 cut(s) | 249, 951, 959, 1132, 1134, 1313, 1595, 1835, 2120 |
| SspMI | CTAG | 8 cut(s) | 89, 956, 1839, 1851, 2127, 2327, 2469, 2561 |
| SstI | GAGCTC | 1 cut(s) | 2388 |
| StyD4I | CCNGG | 6 cut(s) | 353, 354, 742, 1303, 1929, 2571 |
| StyI | CCWWGG | 3 cut(s) | 305, 1881, 2092 |
| TaaI | ACNGT | 7 cut(s) | 1093, 1438, 1792, 2065, 2247, 2489, 2681 |
| TaiI | ACGT | 6 cut(s) | 219, 240, 427, 434, 1500, 1641 |
| TaqII | GACCGA | 2 cut(s) | 23, 1052 |
| TasI | AATT | 9 cut(s) | 56, 390, 476, 1429, 1549, 2012, 2433, 2542, 2648 |
| TatI | WGTACW | 2 cut(s) | 684, 1787 |
| TauI | GCSGC | 1 cut(s) | 251 |
| TfiI | GAWTC | 5 cut(s) | 705, 1316, 1477, 1842, 2295 |
| TscAI | CASTG | 3 cut(s) | 619, 1399, 2070 |
| TseFI | GTSAC | 4 cut(s) | 221, 233, 1408, 1441 |
| TseI | GCWGC | 2 cut(s) | 257, 2473 |
| Tsp45I | GTSAC | 4 cut(s) | 221, 233, 1408, 1441 |
| TspDTI | ATGAA | 9 cut(s) | 636, 665, 700, 1501, 1714, 1742, 2077, 2601, 2657 |
| TspGWI | ACGGA | 4 cut(s) | 583, 619, 1548, 2595 |
| TspMI | CCCGGG | 1 cut(s) | 354 |
| TspRI | CASTG | 3 cut(s) | 619, 1399, 2070 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1562 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1863 |
| Vha464I | CTTAAG | 2 cut(s) | 641, 784 |
| VpaK11BI | GGWCC | 4 cut(s) | 6, 1064, 1832, 2180 |
| VspI | ATTAAT | 1 cut(s) | 570 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2588 |
| XapI | RAATTY | 2 cut(s) | 56, 2542 |
| XceI | RCATGY | 3 cut(s) | 160, 658, 685 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 750 |
| XhoI | CTCGAG | 1 cut(s) | 2387 |
| XmaI | CCCGGG | 1 cut(s) | 354 |
| XmiI | GTMKAC | 2 cut(s) | 1566, 1641 |
| XspI | CTAG | 8 cut(s) | 89, 956, 1839, 1851, 2127, 2327, 2469, 2561 |
| ZraI | GACGTC | 1 cut(s) | 1498 |