Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

27093717 .. 27096763

Gene Structure 3047 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g37140.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2400 bp

ATGCAGACAAGCTTTGTTATTAATCTCGGAGAACAAGCTCATGTGCCCATCATATCATTTTCTGCAACAAGTCCTTCGCTTACTTCCCTCTGGAGTCCCTATTTTATCCAGTGTGCACAGAATGACACATCCCAAGTGAAAGCTATTAGTGCCCTCATTAACAGTTACGGGTGGAGACAAGTTGTGCCTGTATACATAGACACTTCGTACGGGGAGGCAGTGATGCCGTTTTTAACCGATGCCTTACAGGAGATAGGTGTGGCTGTCCCCTACCGGAGTGTGATTTCTCCCTCGGCAACAGATGATCAAATTGCCAACGAGCTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATTGTCCATATGACACCTGATCTATGCTCTAAGGTATTTGCCAAGGCAGAAGAGATTGGGATGATGGTTGAAGGCTATGTTTGGCTAACCACAAGTGGAATAACTAATAGTCTAAGTTCCCGAAAATCTTCGGTCATCGATTCCATGAATGGAGTCATAGGTGTGCAAACTTATGTCCAACAAACAGCAGAGCTAGAAGCGTTCAAACTCCGGTGGAGAAGGCAATTCCAAAAGGACCATCCACTCGTTGTTGGCGCCAAATTGGATGTTTTCGGATTTTGGGCTTATGATGCTACTTTTGCACTAGCAATGGCGATTGAACAAGTCATAGGCAATACAAGAAGTTCTGGTTTCCAAAACGCCAATGCCTCCGACAAGTCCACAGGTACTCTTGACAATCTTCCAATCTCTCCATATGGTCCAAAACTTTCCAAGGCCCTGTCCACTACTAGATTCCCAGGCGTTGCTGGAGATTTCATGCTCATCGATGGTCAACTTCAATCATCCAAGTTTCGGATAATAAATGTCAACGGTCGTGGAGCAAGAACAATTGGATTTTGGACACCACAACATGGACTTGTTAGCCAAATGAATCATTCCACAAGCCATCCAAGACCTGTCATTTGGCCAGGAGATTCTCTCTCTGTTCCCAAAGGGTGGGATATCCCGACAAAGGGCAAGCGGTTAAGAATAGGAGTTCCTGTAAAGGATGGGTTTTTCGAGCTGGTTAAGGTAACAATAGATAAAACCAAGAACACAACAGATGTTACCGGATTCAGTATTGATGTGTTCAAGGCCGTAGTTGAGAAGTTACCATATGCTCTTCCTTATGACTTCATTCCCTTTGCAAAGCCTGATGGCACCGCAGCTGGCACTTACAACGATATGTGCTATCAAGTACATCTTGGGAATTTTGATGCTGTGGTCGGAGACACAACAATTAGAGCAAATAGGTCTCTGTATGTGGACTTTACAATGCCATATGCAGAAGCCGGAGTAGTAATGGTTGTGCCGATCATAGACAGAAATAGAAGAAGTGCATGGGCCTTCTTGAAGCCATGGGAATGGGACATTTGGCTTGCAATCATAATTTCCTTATTGTCAGTTGGTTTTGTTGTTTGGGCCATTGAACACCACACTAATGAAGACTTTCAGGGCAAAACCGCAGAGAAAGAAGTCGGCCGAGTTGTCTGGTTCTCCTTCTCAACCATGGTTTTTGCTCAACTCGAAAAACTTGAGCCAACTAGTACCAGCATCCAGGATCTATTAAGGAAGGGGGAAAACATCGGCTATATAGCATCTTCTTATACTTACGAGATGTTGAAGCAAGTAGGTTTTGAAGATTCCAAGCTTCGGGATTTCGGGACAATGGAAGCAATTCACGATGCTTTTTCAAACGGTGGCATCGCTGGTTTTGTTGATGAAACACCCTATATGAACCTTTTTCTTGCAAGGTACTGCAACAAATATACCATGATTGGACCCATCTTCAAAACCGATGGATTTGGCTTTGTATTTCCAAAACGCTCTCCTCTCCTACCCGATGTTTCCCAGGCAGTCTTGAATATCACTGGAGGAGAAACGATACTGAACCTCGAAAATGCATGGTTCAAGAAAGACGGCAACTGTGAAGACGCCAGTAACCCTCAAGTTTCCAGCAATAAGCTTGACTTCAGAGACTTCCGGGTTCTATTCCTCACTACCTTGGTGGCTTCAGGACTTGCACTCATCATATATGTAGTTCGGTTCAGTTACAGGTATAGGGACGTTTGGAATTCTGAAACCTCTATATGTAGAGGAATTGCGGCCATGTTTCGAAAATTTCTTGATATAGACCCCAACTCTCATACTTTTAGAAGCAACCAGCAGCCGGGTGTAGTTGCAGCCACTCCAAACAACAATAGCCTAGAAAGTCCTGAACTCATCCAAAATTCGAACCATGCAAATTCAAATTATGTATCTACTGATTCTGATTCTGATTCTGGAGAGCAGCGATCATCGACAGAGTCTGCTACTGAAGTTCTTCTATTGAGCAATCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

800

Amino Acids

88.84

Weight (kDa)

5.8

Isoelectric Point (pI)

31.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	2 - 297	5.1e-67	Receptor family ligand binding region
Peripla_BP_6	PF13458	8 - 237	1.4e-09	Periplasmic binding protein
Lig_chan-Glu_bd	PF10613	366 - 456	4.9e-07	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	371 - 657	4.3e-08	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	474 - 689	3e-09	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	611, 1217
AccB7I	CCANNNNNTGG	2 cut(s)	929, 1014
AccI	GTMKAC	1 cut(s)	192
AciI	CCGC	4 cut(s)	1039, 1221, 1521, 2162
AclWI	GGATC	1 cut(s)	1626
AcoI	YGGCCR	3 cut(s)	983, 1537, 2163
AcsI	RAATTY	5 cut(s)	1267, 2131, 2177, 2287, 2302
AcuI	CTGAAG	3 cut(s)	2014, 2055, 2394
AcyI	GRCGYC	2 cut(s)	612, 1992
AfaI	GTAC	5 cut(s)	209, 745, 1257, 1606, 1814
AfiI	CCNNNNNNNGG	7 cut(s)	870, 929, 1014, 1030, 1031, 1710, 2227
AhlI	ACTAGT	1 cut(s)	1601
AjnI	CCWGG	4 cut(s)	814, 985, 1614, 1908
AluBI	AGCT	9 cut(s)	12, 38, 143, 322, 550, 1081, 1226, 1708, 2023
AluI	AGCT	9 cut(s)	12, 38, 143, 322, 550, 1081, 1226, 1708, 2023
Alw21I	GWGCWC	1 cut(s)	118
Alw26I	GTCTC	4 cut(s)	169, 1281, 1317, 2028
Alw44I	GTGCAC	1 cut(s)	114
AlwI	GGATC	1 cut(s)	1626
AlwNI	CAGNNNCTG	1 cut(s)	2366
AoxI	GGCC	7 cut(s)	792, 983, 1152, 1401, 1479, 1537, 2163
ApaLI	GTGCAC	1 cut(s)	114
ApeKI	GCWGC	4 cut(s)	1223, 2224, 2240, 2347
ApoI	RAATTY	5 cut(s)	1267, 2131, 2177, 2287, 2302
ArsI	GACNNNNNNTTYG	2 cut(s)	963, 995
AseI	ATTAAT	1 cut(s)	21
Asp700I	GAANNNNTTC	4 cut(s)	484, 1506, 1734, 2379
AspLEI	GCGC	1 cut(s)	614
AspS9I	GGNCC	6 cut(s)	592, 776, 793, 1401, 1479, 1838
AsuC2I	CCSGG	2 cut(s)	2042, 2229
AsuII	TTCGAA	2 cut(s)	2173, 2291
AvaII	GGWCC	3 cut(s)	592, 776, 1838
BaeGI	GKGCMC	3 cut(s)	48, 118, 154
BalI	TGGCCA	1 cut(s)	985
BanI	GGYRCC	2 cut(s)	611, 1217
BbsI	GAAGAC	3 cut(s)	346, 1509, 1995
Bbv12I	GWGCWC	1 cut(s)	118
BbvI	GCAGC	4 cut(s)	1235, 2236, 2252, 2359
BccI	CCATC	9 cut(s)	56, 415, 603, 839, 972, 1061, 1208, 1850, 1850
BceAI	ACGGC	3 cut(s)	211, 1139, 1993
BciT130I	CCWGG	4 cut(s)	816, 987, 1616, 1910
BclI	TGATCA	1 cut(s)	304
BcnI	CCSGG	2 cut(s)	2042, 2229
BcoDI	GTCTC	4 cut(s)	169, 1281, 1317, 2028
BcuI	ACTAGT	1 cut(s)	1601
BfaI	CTAG	6 cut(s)	348, 551, 662, 807, 1602, 2264
BfoI	RGCGCY	1 cut(s)	615
BisI	GCNGC	5 cut(s)	1224, 2163, 2225, 2241, 2348
BlsI	GCNGC	5 cut(s)	1225, 2164, 2226, 2242, 2349
Bme1390I	CCNGG	6 cut(s)	816, 987, 1616, 1910, 2042, 2229
Bme18I	GGWCC	3 cut(s)	592, 776, 1838
BmgT120I	GGNCC	6 cut(s)	592, 776, 793, 1401, 1479, 1838
BmiI	GGNNCC	3 cut(s)	613, 1219, 1840
BmrFI	CCNGG	6 cut(s)	816, 987, 1616, 1910, 2042, 2229
BmsI	GCATC	8 cut(s)	213, 229, 637, 1264, 1620, 1664, 1732, 1770
BpiI	GAAGAC	3 cut(s)	346, 1509, 1995
BplI	GAGNNNNNCTC	2 cut(s)	981, 1013
BpmI	CTGGAG	4 cut(s)	112, 846, 1950, 2361
Bpu14I	TTCGAA	2 cut(s)	2173, 2291
BpuEI	CTTGAG	2 cut(s)	1613, 1989
BpuMI	CCSGG	2 cut(s)	2042, 2229
Bsa29I	ATCGAT	2 cut(s)	495, 843
BsaHI	GRCGYC	2 cut(s)	612, 1992
BsaI	GGTCTC	1 cut(s)	1317
BsaJI	CCNNGG	8 cut(s)	291, 399, 789, 814, 1415, 1566, 1908, 2061
BsaWI	WCCGGW	3 cut(s)	273, 567, 1127
BsaXI	ACNNNNNCTCC	2 cut(s)	1044, 1074
Bsc4I	CCNNNNNNNGG	7 cut(s)	870, 929, 1014, 1030, 1031, 1710, 2227
Bse1I	ACTGG	3 cut(s)	109, 1933, 1995
Bse3DI	GCAATG	1 cut(s)	672
BseBI	CCWGG	4 cut(s)	816, 987, 1616, 1910
BseCI	ATCGAT	2 cut(s)	495, 843
BseDI	CCNNGG	8 cut(s)	291, 399, 789, 814, 1415, 1566, 1908, 2061
BseGI	GGATG	9 cut(s)	128, 423, 595, 628, 860, 964, 1072, 1611, 2280
BseLI	CCNNNNNNNGG	7 cut(s)	870, 929, 1014, 1030, 1031, 1710, 2227
BseMI	GCAATG	1 cut(s)	672
BseNI	ACTGG	3 cut(s)	109, 1933, 1995
BseRI	GAGGAG	2 cut(s)	1878, 1947
BseSI	GKGCMC	3 cut(s)	48, 118, 154
BseX3I	CGGCCG	1 cut(s)	1537
BseXI	GCAGC	4 cut(s)	1235, 2236, 2252, 2359
Bsh1285I	CGRYCG	2 cut(s)	892, 1540
BshFI	GGCC	7 cut(s)	794, 985, 1154, 1403, 1481, 1539, 2165
BshNI	GGYRCC	2 cut(s)	611, 1217
BshVI	ATCGAT	2 cut(s)	495, 843
BsiEI	CGRYCG	2 cut(s)	892, 1540
BsiHKAI	GWGCWC	1 cut(s)	118
BsiSI	CCGG	6 cut(s)	274, 568, 1128, 1350, 2041, 2228
BsiWI	CGTACG	1 cut(s)	207
BslFI	GGGAC	5 cut(s)	81, 251, 1439, 1735, 2135
BslI	CCNNNNNNNGG	7 cut(s)	870, 929, 1014, 1030, 1031, 1710, 2227
BsmAI	GTCTC	4 cut(s)	169, 1281, 1317, 2028
BsmFI	GGGAC	5 cut(s)	81, 251, 1439, 1735, 2135
BsnI	GGCC	7 cut(s)	794, 985, 1154, 1403, 1481, 1539, 2165
Bso31I	GGTCTC	1 cut(s)	1317
Bsp119I	TTCGAA	2 cut(s)	2173, 2291
Bsp1286I	GDGCHC	3 cut(s)	48, 118, 154
Bsp143I	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
Bsp19I	CCATGG	2 cut(s)	1415, 1566
BspACI	CCGC	4 cut(s)	1039, 1221, 1521, 2162
BspANI	GGCC	7 cut(s)	794, 985, 1154, 1403, 1481, 1539, 2165
BspDI	ATCGAT	2 cut(s)	495, 843
BspLI	GGNNCC	3 cut(s)	613, 1219, 1840
BspPI	GGATC	1 cut(s)	1626
BspQI	GCTCTTC	1 cut(s)	1185
BspT104I	TTCGAA	2 cut(s)	2173, 2291
BspT107I	GGYRCC	2 cut(s)	611, 1217
BspTNI	GGTCTC	1 cut(s)	1317
BsrDI	GCAATG	1 cut(s)	672
BsrI	ACTGG	3 cut(s)	109, 1933, 1995
BssECI	CCNNGG	8 cut(s)	291, 399, 789, 814, 1415, 1566, 1908, 2061
BssMI	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
BssNAI	GTATAC	1 cut(s)	193
BssNI	GRCGYC	2 cut(s)	612, 1992
BssT1I	CCWWGG	5 cut(s)	399, 789, 1415, 1566, 2061
Bst1107I	GTATAC	1 cut(s)	193
Bst2UI	CCWGG	4 cut(s)	816, 987, 1616, 1910
Bst4CI	ACNGT	4 cut(s)	164, 890, 1757, 1985
Bst6I	CTCTTC	2 cut(s)	402, 1185
BstACI	GRCGYC	2 cut(s)	612, 1992
BstBI	TTCGAA	2 cut(s)	2173, 2291
BstC8I	GCNNGC	3 cut(s)	1037, 1228, 1437
BstDEI	CTNAG	2 cut(s)	387, 470
BstDSI	CCRYGG	2 cut(s)	1415, 1566
BstF5I	GGATG	9 cut(s)	128, 423, 595, 628, 860, 964, 1072, 1611, 2280
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	1 cut(s)	614
BstKTI	GATC	5 cut(s)	307, 379, 1374, 1621, 2354
BstMAI	GTCTC	4 cut(s)	169, 1281, 1317, 2028
BstMBI	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
BstMCI	CGRYCG	2 cut(s)	892, 1540
BstMWI	GCNNNNNNNGC	3 cut(s)	149, 647, 656
BstNI	CCWGG	4 cut(s)	816, 987, 1616, 1910
BstSCI	CCNGG	6 cut(s)	814, 985, 1614, 1908, 2040, 2227
BstSLI	GKGCMC	3 cut(s)	48, 118, 154
BstV1I	GCAGC	4 cut(s)	1235, 2236, 2252, 2359
BstV2I	GAAGAC	3 cut(s)	346, 1509, 1995
BstX2I	RGATCY	1 cut(s)	1618
BstXI	CCANNNNNNTGG	1 cut(s)	1422
BstYI	RGATCY	1 cut(s)	1618
BstZ17I	GTATAC	1 cut(s)	193
BstZI	CGGCCG	1 cut(s)	1537
Bsu15I	ATCGAT	2 cut(s)	495, 843
BsuRI	GGCC	7 cut(s)	794, 985, 1154, 1403, 1481, 1539, 2165
BsuTUI	ATCGAT	2 cut(s)	495, 843
BtgI	CCRYGG	2 cut(s)	1415, 1566
BtgZI	GCGATG	1 cut(s)	1747
BtsCI	GGATG	9 cut(s)	128, 423, 595, 628, 860, 964, 1072, 1611, 2280
BtsI	GCAGTG	1 cut(s)	225
BtsIMutI	CAGTG	4 cut(s)	116, 225, 1926, 2395
Cac8I	GCNNGC	3 cut(s)	1037, 1228, 1437
CaiI	CAGNNNCTG	1 cut(s)	2366
CfoI	GCGC	1 cut(s)	614
Cfr13I	GGNCC	6 cut(s)	592, 776, 793, 1401, 1479, 1838
ClaI	ATCGAT	2 cut(s)	495, 843
CseI	GACGC	1 cut(s)	2000
Csp6I	GTAC	5 cut(s)	208, 744, 1256, 1605, 1813
CspCI	CAANNNNNGTGG	2 cut(s)	874, 909
CviQI	GTAC	5 cut(s)	208, 744, 1256, 1605, 1813
DdeI	CTNAG	2 cut(s)	387, 470
DinI	GGCGCC	1 cut(s)	613
DpnI	GATC	5 cut(s)	306, 378, 1373, 1620, 2353
DpnII	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
EaeI	YGGCCR	3 cut(s)	983, 1537, 2163
EagI	CGGCCG	1 cut(s)	1537
Eam1104I	CTCTTC	2 cut(s)	402, 1185
EarI	CTCTTC	2 cut(s)	402, 1185
EclXI	CGGCCG	1 cut(s)	1537
Eco130I	CCWWGG	5 cut(s)	399, 789, 1415, 1566, 2061
Eco31I	GGTCTC	1 cut(s)	1317
Eco32I	GATATC	1 cut(s)	1021
Eco47I	GGWCC	3 cut(s)	592, 776, 1838
Eco52I	CGGCCG	1 cut(s)	1537
Eco57I	CTGAAG	3 cut(s)	2014, 2055, 2394
EcoO109I	RGGNCCY	1 cut(s)	793
EcoRI	GAATTC	1 cut(s)	2131
EcoRII	CCWGG	4 cut(s)	814, 985, 1614, 1908
EcoRV	GATATC	1 cut(s)	1021
EcoT14I	CCWWGG	5 cut(s)	399, 789, 1415, 1566, 2061
EcoT22I	ATGCAT	1 cut(s)	1963
EgeI	GGCGCC	1 cut(s)	613
EheI	GGCGCC	1 cut(s)	613
ErhI	CCWWGG	5 cut(s)	399, 789, 1415, 1566, 2061
FalI	AAGNNNNNCTT	4 cut(s)	1245, 1277, 2012, 2044
FaqI	GGGAC	5 cut(s)	81, 251, 1439, 1735, 2135
FauNDI	CATATG	4 cut(s)	366, 772, 1174, 1339
FbaI	TGATCA	1 cut(s)	304
FblI	GTMKAC	1 cut(s)	192
Fnu4HI	GCNGC	5 cut(s)	1224, 2163, 2225, 2241, 2348
FokI	GGATG	9 cut(s)	115, 430, 582, 635, 847, 951, 1079, 1598, 2267
Fsp4HI	GCNGC	5 cut(s)	1224, 2163, 2225, 2241, 2348
FspBI	CTAG	6 cut(s)	348, 551, 662, 807, 1602, 2264
GlaI	GCGC	1 cut(s)	613
GluI	GCNGC	5 cut(s)	1224, 2163, 2225, 2241, 2348
GsuI	CTGGAG	4 cut(s)	112, 846, 1950, 2361
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	7 cut(s)	794, 985, 1154, 1403, 1481, 1539, 2165
HapII	CCGG	6 cut(s)	274, 568, 1128, 1350, 2041, 2228
HgaI	GACGC	1 cut(s)	2000
HhaI	GCGC	1 cut(s)	614
Hin1I	GRCGYC	2 cut(s)	612, 1992
Hin6I	GCGC	1 cut(s)	612
HinP1I	GCGC	1 cut(s)	612
HincII	GTYRAC	2 cut(s)	851, 886
HindII	GTYRAC	2 cut(s)	851, 886
HindIII	AAGCTT	3 cut(s)	10, 1706, 2021
HpaII	CCGG	6 cut(s)	274, 568, 1128, 1350, 2041, 2228
Hpy166II	GTNNAC	7 cut(s)	116, 193, 738, 801, 851, 886, 1324
Hpy188I	TCNGA	9 cut(s)	29, 632, 730, 873, 1286, 2033, 2137, 2329, 2335
Hpy8I	GTNNAC	7 cut(s)	116, 193, 738, 801, 851, 886, 1324
HpyAV	CCTTC	6 cut(s)	84, 422, 570, 1414, 1567, 1624
HpyCH4III	ACNGT	4 cut(s)	164, 890, 1757, 1985
HpyCH4IV	ACGT	1 cut(s)	2124
HpyF10VI	GCNNNNNNNGC	3 cut(s)	149, 647, 656
HpyF3I	CTNAG	2 cut(s)	387, 470
HpySE526I	ACGT	1 cut(s)	2124
Hsp92I	GRCGYC	2 cut(s)	612, 1992
HspAI	GCGC	1 cut(s)	612
KasI	GGCGCC	1 cut(s)	611
Ksp22I	TGATCA	1 cut(s)	304
Kzo9I	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
LguI	GCTCTTC	1 cut(s)	1185
LmnI	GCTCC	1 cut(s)	896
Lsp1109I	GCAGC	4 cut(s)	1235, 2236, 2252, 2359
LweI	GCATC	8 cut(s)	213, 229, 637, 1264, 1620, 1664, 1732, 1770
MaeI	CTAG	6 cut(s)	348, 551, 662, 807, 1602, 2264
MaeII	ACGT	1 cut(s)	2124
MaeIII	GTNAC	6 cut(s)	164, 1090, 1123, 1167, 1997, 2108
MalI	GATC	5 cut(s)	306, 378, 1373, 1620, 2353
MboI	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
MfeI	CAATTG	1 cut(s)	906
MflI	RGATCY	1 cut(s)	1618
MhlI	GDGCHC	3 cut(s)	48, 118, 154
MlsI	TGGCCA	1 cut(s)	985
MluNI	TGGCCA	1 cut(s)	985
Mly113I	GGCGCC	1 cut(s)	612
MlyI	GAGTC	4 cut(s)	103, 360, 519, 2372
MmeI	TCCRAC	3 cut(s)	559, 753, 1264
Mox20I	TGGCCA	1 cut(s)	985
Mph1103I	ATGCAT	1 cut(s)	1963
MroXI	GAANNNNTTC	4 cut(s)	484, 1506, 1734, 2379
MscI	TGGCCA	1 cut(s)	985
MseI	TTAA	6 cut(s)	21, 159, 233, 1043, 1086, 1625
MslI	CAYNNNNRTG	3 cut(s)	518, 1420, 1497
Msp20I	TGGCCA	1 cut(s)	985
MspA1I	CMGCKG	1 cut(s)	1226
MspI	CCGG	6 cut(s)	274, 568, 1128, 1350, 2041, 2228
MspR9I	CCNGG	6 cut(s)	816, 987, 1616, 1910, 2042, 2229
MunI	CAATTG	1 cut(s)	906
MvaI	CCWGG	4 cut(s)	816, 987, 1616, 1910
MwoI	GCNNNNNNNGC	3 cut(s)	149, 647, 656
NarI	GGCGCC	1 cut(s)	612
NciI	CCSGG	2 cut(s)	2042, 2229
NcoI	CCATGG	2 cut(s)	1415, 1566
NdeI	CATATG	4 cut(s)	366, 772, 1174, 1339
NdeII	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
NlaIV	GGNNCC	3 cut(s)	613, 1219, 1840
NmeAIII	GCCGAG	2 cut(s)	272, 1565
NsiI	ATGCAT	1 cut(s)	1963
NspV	TTCGAA	2 cut(s)	2173, 2291
PciSI	GCTCTTC	1 cut(s)	1185
PdmI	GAANNNNTTC	4 cut(s)	484, 1506, 1734, 2379
PfeI	GAWTC	9 cut(s)	497, 810, 949, 992, 1131, 1700, 2324, 2330, 2336
Pfl23II	CGTACG	1 cut(s)	207
PflFI	GACNNNGTC	1 cut(s)	2362
PflMI	CCANNNNNTGG	2 cut(s)	929, 1014
PfoI	TCCNGGA	1 cut(s)	1614
PkrI	GCNGC	5 cut(s)	1225, 2164, 2226, 2242, 2349
PleI	GAGTC	4 cut(s)	102, 359, 518, 2371
PluTI	GGCGCC	1 cut(s)	615
PpsI	GAGTC	4 cut(s)	102, 359, 518, 2371
PshBI	ATTAAT	1 cut(s)	21
Psp6I	CCWGG	4 cut(s)	814, 985, 1614, 1908
PspGI	CCWGG	4 cut(s)	814, 985, 1614, 1908
PspLI	CGTACG	1 cut(s)	207
PspN4I	GGNNCC	3 cut(s)	613, 1219, 1840
PspPI	GGNCC	6 cut(s)	592, 776, 793, 1401, 1479, 1838
PstNI	CAGNNNCTG	1 cut(s)	2366
PsuI	RGATCY	1 cut(s)	1618
PsyI	GACNNNGTC	1 cut(s)	2362
PvuII	CAGCTG	1 cut(s)	1226
RsaI	GTAC	5 cut(s)	209, 745, 1257, 1606, 1814
RsaNI	GTAC	5 cut(s)	208, 744, 1256, 1605, 1813
RseI	CAYNNNNRTG	3 cut(s)	518, 1420, 1497
SapI	GCTCTTC	1 cut(s)	1185
SaqAI	TTAA	6 cut(s)	21, 159, 233, 1043, 1086, 1625
SatI	GCNGC	5 cut(s)	1224, 2163, 2225, 2241, 2348
Sau3AI	GATC	5 cut(s)	304, 376, 1371, 1618, 2351
Sau96I	GGNCC	6 cut(s)	592, 776, 793, 1401, 1479, 1838
SchI	GAGTC	4 cut(s)	103, 360, 519, 2372
ScrFI	CCNGG	6 cut(s)	816, 987, 1616, 1910, 2042, 2229
SduI	GDGCHC	3 cut(s)	48, 118, 154
SfaNI	GCATC	8 cut(s)	213, 229, 637, 1264, 1620, 1664, 1732, 1770
SfoI	GGCGCC	1 cut(s)	613
SfuI	TTCGAA	2 cut(s)	2173, 2291
SinI	GGWCC	3 cut(s)	592, 776, 1838
SmiMI	CAYNNNNRTG	3 cut(s)	518, 1420, 1497
SmlI	CTYRAG	2 cut(s)	1592, 2004
SmoI	CTYRAG	2 cut(s)	1592, 2004
SpeI	ACTAGT	1 cut(s)	1601
SsiI	CCGC	4 cut(s)	1039, 1221, 1521, 2162
SspDI	GGCGCC	1 cut(s)	611
SspMI	CTAG	6 cut(s)	348, 551, 662, 807, 1602, 2264
StyD4I	CCNGG	6 cut(s)	814, 985, 1614, 1908, 2040, 2227
StyI	CCWWGG	5 cut(s)	399, 789, 1415, 1566, 2061
TaaI	ACNGT	4 cut(s)	164, 890, 1757, 1985
TaiI	ACGT	1 cut(s)	2127
TaqI	TCGA	8 cut(s)	495, 843, 1077, 1584, 1953, 2173, 2291, 2357
TaqII	GACCGA	1 cut(s)	478
TatI	WGTACW	1 cut(s)	1255
TauI	GCSGC	1 cut(s)	2165
TfiI	GAWTC	9 cut(s)	497, 810, 949, 992, 1131, 1700, 2324, 2330, 2336
Tru1I	TTAA	6 cut(s)	21, 159, 233, 1043, 1086, 1625
Tru9I	TTAA	6 cut(s)	21, 159, 233, 1043, 1086, 1625
TscAI	CASTG	3 cut(s)	116, 225, 1933
TseI	GCWGC	4 cut(s)	1223, 2224, 2240, 2347
TspDTI	ATGAA	8 cut(s)	346, 518, 823, 962, 1183, 1515, 1794, 1808
TspRI	CASTG	3 cut(s)	116, 225, 1933
Tth111I	GACNNNGTC	1 cut(s)	2362
Van91I	CCANNNNNTGG	2 cut(s)	929, 1014
VneI	GTGCAC	1 cut(s)	114
VpaK11BI	GGWCC	3 cut(s)	592, 776, 1838
VspI	ATTAAT	1 cut(s)	21
XapI	RAATTY	5 cut(s)	1267, 2131, 2177, 2287, 2302
XmiI	GTMKAC	1 cut(s)	192
XmnI	GAANNNNTTC	4 cut(s)	484, 1506, 1734, 2379
XspI	CTAG	6 cut(s)	348, 551, 662, 807, 1602, 2264
Zsp2I	ATGCAT	1 cut(s)	1963

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.