RLG00000010458

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
1754593 .. 1759454
4862 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010458

Sequence Viewer

Length: 2940 bp
ATGGGAACACTGTTGTGCACGTGGCATGCTTTGGAGGTAACAGTACCAAAAGCTAGATGCCTCCTAAGTGGAGATAGTGCACGACAACCAGACAACCGTATAAAACTAGAGGTTCCATATGTACAAGTGAACCGCCTGCTGAACGATAAGAGGAGACTTCCTTCTTCCTCCCTCTCTAGGGCGGTGAGGAAGGAACATCCTTTTTTTCATCTCCCTTACGCAGCTGGGGAACAAAGTATTATTCTATTTGAAATTCTACCATCCATCAGCATATATATAAGCTTCTTCTTCCTAGTTTGGTGCAATGAGTTTCAGACCCTCCCAGAAACTCAAATATGTTCAAGAATTATCCTACCAAACCTTGTACTCCTGGCCATGGCACAGAAGAAAACAACACCAGTAAATGTGGGTGTGATTCTTGAGTCGGATACATGGTTTGGAAAAATGGGGCTCAGCTGCATCAACATGGCTCTCTCTGACTTCTATGCCGTTCATGCTTACTACAATACTAGGATGGTTCTAGAGACTCCCGGAAAGAAATTGTCGTTGCAGCTGGAGCAGACTTTCACCTTTGACACAGCTCTAGATTTAATAAATAATGTTGAAGTGCAAGCCATCATTGGGCCGGAATCATCTATGAAAGCCAAATTTGTTACTGAACTTGGAGATAAAGCTCAGGTGCCTATAATCTCATTTTCTGCAACAAGCCCTTCCCTTCGGAGTTCATATTTTTTCCAAATTGCACAAAGTGACTCATCTCAAGTGAAAGCCATAAGTTCCATCATCCAAGCGTTTGGTTGGAATGAAGCAGTGCCAATCAGCGTGGATGATGAGTTTGGGGAGGGAATGATACCTTCCTTGACTACCGCTTTGCAAGCGGTTGGTGCTGCTATCCCTTACTGGAGTATCATTCCTTCAATGGCCACTAATGACCAAATTGGTGCTGAGCTGTACAAGTTGATGACAATGCAAACCAGGGTCTTCATACTCCATATGGCTCCTTCTCTTGGCTCTCGGCTTTTTGCCAAGGCAAAGGAGCTTGGAATGATGAATGAAGGCTATGTTTGGATAATGACAAATGGAATGACTAACTATTTCAGTTCCTTAAATTCTTCTGTCATAGAGACCATGCAAGGGGTGTTGGGCCTGAAGACTTATGTTCCAGTCACAGAAGAGCTTGAAAATTTTAGAGGTAGATGGCAAAGGAAATTCCAACAAGAAAATCCAAACCTTCTTAATGTTAAATTGGATGTCTTTGGACTGTGGGCTCATGATGCTGCTTGGGCACTGGCCATGGCAATTGAGAAGGTTGGGAGTACAAACTTCAGCTTTCAAAACATGAACATTTCTGGTAGTTCCAGGGATATAGAAAGACTTGGGGTTTCTCAAAGTGGTCCTGAACTTGTTGGAGAACTATCAGGTACAAAATTCAGAGGCCTTTCAGGAGATTTCAGTCTTATCAATGGCCAACTACAATCATCAATTTTTCAGGTAGTTAATGTGAATGATGGTGGGGAAAGAGGGATTGGATATTGGACACCTCAAAATGGACTTGTAAGGAACTTAAGTTCGAAAAACAAAAGCAGATACTCTGCTTCTAATGTCAGTCTTGGTCCTATTATATGGCCCGGAGAAACCACCTCTGCTCCCAAGGGTTGGCAGATTCCTATGAGGGGAAGAAAATTGAGAATTTTAGTTCCGGTGAAGCGCGGATTTAAAGAATTTGTAAATGTGACACATGATCCTACCACGAACAGAACCAATGTCACTGGATACTGCATAGATGTCTTTCATGCTGTAATTGAAGCAATACCATATGATGTTCTGCATGAATTTTTCGCCTTTGCAAAGCCTGAAAGTTACGATGATTTGGTCAATCAAGTGTTTCTTGGGTGGTGGTGGTTAATGCTTTTGTTAAGCAACTGTTATACACTTGGTTTTCTGTTTGTTAGGGAGCAAGTAGTGAGCAGCTTGGCTCAGTTTGTAGTAATTGTATGGTGCTTTGTTGTCCTCATAATGACACAGAGTTATGCTGCCAGTTTAGCAACATTTTTAACAGTTCAACAGCTCCAACCAACTGTTACAGATGTAAACCTGCTTATAAAGAATGGGGACAGTGTTGGTTACCCAACAGGTTCGTCCCTTTATGGTACATTGAAGCAATTAGGATTCCAGGATGAAAACCTTAAGACCTACAATTCAGCAGAAGAATTGGATGAACTTTTCCAAAATGGAAATCATGGTATTTCTGCTGCTTTTGATGACGCCCCCTACATGAGACTTTTTGTTGCAACTTACTGCTCGAATTATACCATGATTGAGCCAAATTTTAAAGCCGATGGTTTTGCCTTTGTCTTCCAAAAAGGTTCACTTCTCACTCGTGATTTTTCAAGGGCAATCACTCTTGTGCAGGAGGGAGTTGATATGAAGCATATCGATAACAAGTGGTTCAGGAAGAAAGCAAGTTGTTCAAACCCCCATACTGCAGGATCTTCCAATAGTGTTACTCTTAGCCTTGATAGCTTTTGGGGGCTCTTCCTCATTGCTGGGGTTGCTTCATTGTTAGCTTTGCTCATATTTGCTGCTATGTTCCTCTATGAGCATAGATACACCTTGAGATGCATTGATCCTGAAATCTCGTTTTGGAGAAGAATTTGTGTCATACTGAGAGTGTATGACCAAAAAGACCTCAGTTCGAAGACTTACAAGGGAAGCAGACTGCAAGAGCTAGACAGTGTTCAAGTTATAGGTGCTGTTGAATCCTCACCCAACATCAGCAGTCCCGAGAGCACATCATGCGATTCCAATGACATAGAATCACAAATTGTTCTTACTGACACTGAGCATGGTGATCTGAATCCCAATAGTCAAGCAACCCAAGAGGTTGAATATGCAATTGAGTTGACTTCCCCAAGCCAAGATAGGCCAATAACTGCTTAG

Protein Analysis

980

Amino Acids

109.22

Weight (kDa)

5.62

Isoelectric Point (pI)

39.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 153 - 503 8.1e-73 Receptor family ligand binding region
Peripla_BP_6 PF13458 194 - 440 6e-14 Periplasmic binding protein
Lig_chan PF00060 642 - 852 2.3e-20 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2102
Acc36I ACCTGC 1 cut(s) 2103
AccB1I GGYRCC 1 cut(s) 679
AccB7I CCANNNNNTGG 1 cut(s) 1656
AccII CGCG 1 cut(s) 1710
AciI CCGC 5 cut(s) 133, 182, 867, 878, 1710
AclWI GGATC 3 cut(s) 1736, 2497, 2621
AcoI YGGCCR 4 cut(s) 372, 921, 1290, 1465
AcuI CTGAAG 2 cut(s) 1169, 1309
AcvI CACGTG 1 cut(s) 21
AcyI GRCGYC 1 cut(s) 2265
AdeI CACNNNGTG 1 cut(s) 749
AfaI GTAC 7 cut(s) 45, 123, 366, 953, 1318, 1423, 2152
AfiI CCNNNNNNNGG 9 cut(s) 177, 178, 376, 621, 1007, 1134, 1547, 1656, 1673
AflII CTTAAG 2 cut(s) 1564, 2186
AjnI CCWGG 4 cut(s) 369, 974, 1358, 2172
AjuI GAANNNNNNNTTGG 2 cut(s) 1509, 1541
AleI CACNNNNGTG 2 cut(s) 13, 2405
AloI GAACNNNNNNTCC 2 cut(s) 1552, 1584
Alw21I GWGCWC 3 cut(s) 20, 82, 2792
Alw26I GTCTC 4 cut(s) 148, 518, 1118, 2272
Alw44I GTGCAC 2 cut(s) 16, 78
AlwI GGATC 3 cut(s) 1736, 2497, 2621
Ama87I CYCGRG 1 cut(s) 2783
AoxI GGCC 9 cut(s) 372, 623, 921, 1144, 1290, 1435, 1465, 1625, 2924
ApaLI GTGCAC 2 cut(s) 16, 78
ApeKI GCWGC 9 cut(s) 221, 456, 550, 887, 1277, 1968, 2033, 2252, 2582
ArsI GACNNNNNNTTYG 2 cut(s) 853, 885
AspLEI GCGC 1 cut(s) 1710
AspS9I GGNCC 5 cut(s) 623, 1144, 1394, 1613, 1626
AsuC2I CCSGG 2 cut(s) 531, 1629
AsuHPI GGTGA 5 cut(s) 196, 559, 1714, 2757, 2861
AsuII TTCGAA 2 cut(s) 1571, 2696
AvaI CYCGRG 1 cut(s) 2783
AvaII GGWCC 2 cut(s) 1394, 1613
BaeGI GKGCMC 3 cut(s) 20, 82, 1288
BaeI ACNNNNGTAYC 2 cut(s) 889, 922
BalI TGGCCA 4 cut(s) 374, 923, 1292, 1467
BanI GGYRCC 1 cut(s) 679
BanII GRGCYC 3 cut(s) 453, 1270, 2535
BarI GAAGNNNNNNTAC 2 cut(s) 898, 930
BauI CACGAG 1 cut(s) 2379
BbrPI CACGTG 1 cut(s) 21
BbsI GAAGAC 4 cut(s) 973, 1157, 2347, 2705
Bbv12I GWGCWC 3 cut(s) 20, 82, 2792
BbvI GCAGC 9 cut(s) 233, 443, 562, 874, 1264, 1980, 2020, 2239, 2569
BccI CCATC 8 cut(s) 268, 272, 508, 623, 788, 1191, 1502, 2333
BceAI ACGGC 1 cut(s) 473
BcgI CGANNNNNNTGC 2 cut(s) 2327, 2361
BciT130I CCWGG 4 cut(s) 371, 976, 1360, 2174
BciVI GTATCC 2 cut(s) 421, 1766
BcnI CCSGG 2 cut(s) 531, 1629
BcoDI GTCTC 4 cut(s) 148, 518, 1118, 2272
BfaI CTAG 8 cut(s) 54, 107, 177, 293, 510, 521, 584, 2729
BfmI CTRYAG 1 cut(s) 2484
BfrI CTTAAG 2 cut(s) 1564, 2186
BfuAI ACCTGC 1 cut(s) 2103
BfuI GTATCC 2 cut(s) 421, 1766
BisI GCNGC 9 cut(s) 222, 457, 551, 888, 1278, 1969, 2034, 2253, 2583
BlpI GCTNAGC 2 cut(s) 452, 945
BlsI GCNGC 9 cut(s) 223, 458, 552, 889, 1279, 1970, 2035, 2254, 2584
Bme1390I CCNGG 6 cut(s) 371, 531, 976, 1360, 1629, 2174
Bme18I GGWCC 2 cut(s) 1394, 1613
BmeT110I CYCGRG 1 cut(s) 2783
BmgT120I GGNCC 5 cut(s) 623, 1144, 1394, 1613, 1626
BmiI GGNNCC 3 cut(s) 114, 681, 999
BmrFI CCNGG 6 cut(s) 371, 531, 976, 1360, 1629, 2174
BmsI GCATC 4 cut(s) 47, 468, 1264, 2609
BpiI GAAGAC 4 cut(s) 973, 1157, 2347, 2705
BpmI CTGGAG 2 cut(s) 575, 922
Bpu10I CCTNAGC 1 cut(s) 675
Bpu1102I GCTNAGC 2 cut(s) 452, 945
Bpu14I TTCGAA 2 cut(s) 1571, 2696
BpuEI CTTGAG 3 cut(s) 440, 744, 2635
BpuMI CCSGG 2 cut(s) 531, 1629
Bsa29I ATCGAT 1 cut(s) 2436
BsaAI YACGTR 1 cut(s) 21
BsaBI GATNNNNATC 1 cut(s) 2856
BsaHI GRCGYC 1 cut(s) 2265
BsaI GGTCTC 1 cut(s) 1118
BsaJI CCNNGG 6 cut(s) 375, 975, 1026, 1293, 1359, 1650
BsaWI WCCGGW 1 cut(s) 1699
BsaXI ACNNNNNCTCC 2 cut(s) 1630, 1660
Bsc4I CCNNNNNNNGG 9 cut(s) 177, 178, 376, 621, 1007, 1134, 1547, 1656, 1673
Bse1I ACTGG 6 cut(s) 398, 905, 1163, 1293, 1774, 2037
Bse3DI GCAATG 2 cut(s) 310, 2541
Bse8I GATNNNNATC 1 cut(s) 2856
BseBI CCWGG 4 cut(s) 371, 976, 1360, 2174
BseCI ATCGAT 1 cut(s) 2436
BseDI CCNNGG 6 cut(s) 375, 975, 1026, 1293, 1359, 1650
BseGI GGATG 8 cut(s) 196, 260, 519, 783, 832, 1255, 2182, 2221
BseJI GATNNNNATC 1 cut(s) 2856
BseLI CCNNNNNNNGG 9 cut(s) 177, 178, 376, 621, 1007, 1134, 1547, 1656, 1673
BseMI GCAATG 2 cut(s) 310, 2541
BseMII CTCAG 7 cut(s) 466, 689, 936, 1991, 2657, 2704, 2832
BseNI ACTGG 6 cut(s) 398, 905, 1163, 1293, 1774, 2037
BseRI GAGGAG 1 cut(s) 166
BseSI GKGCMC 3 cut(s) 20, 82, 1288
BseXI GCAGC 9 cut(s) 233, 443, 562, 874, 1264, 1980, 2020, 2239, 2569
BseYI CCCAGC 2 cut(s) 224, 2546
BsgI GTGCAG 1 cut(s) 2429
Bsh1236I CGCG 1 cut(s) 1710
BshFI GGCC 9 cut(s) 374, 625, 923, 1146, 1292, 1437, 1467, 1627, 2926
BshNI GGYRCC 1 cut(s) 679
BshVI ATCGAT 1 cut(s) 2436
BsiHKAI GWGCWC 3 cut(s) 20, 82, 2792
BsiHKCI CYCGRG 1 cut(s) 2783
BsiSI CCGG 4 cut(s) 531, 626, 1629, 1700
BslFI GGGAC 3 cut(s) 2125, 2126, 2766
BslI CCNNNNNNNGG 9 cut(s) 177, 178, 376, 621, 1007, 1134, 1547, 1656, 1673
BsmAI GTCTC 4 cut(s) 148, 518, 1118, 2272
BsmFI GGGAC 3 cut(s) 2125, 2126, 2766
BsnI GGCC 9 cut(s) 374, 625, 923, 1146, 1292, 1437, 1467, 1627, 2926
Bso31I GGTCTC 1 cut(s) 1118
BsoBI CYCGRG 1 cut(s) 2783
Bsp119I TTCGAA 2 cut(s) 1571, 2696
Bsp1286I GDGCHC 7 cut(s) 20, 82, 453, 1270, 1288, 2535, 2792
Bsp1407I TGTACA 2 cut(s) 121, 951
Bsp143I GATC 4 cut(s) 1741, 2489, 2626, 2851
Bsp1720I GCTNAGC 2 cut(s) 452, 945
Bsp19I CCATGG 2 cut(s) 375, 1293
BspACI CCGC 5 cut(s) 133, 182, 867, 878, 1710
BspANI GGCC 9 cut(s) 374, 625, 923, 1146, 1292, 1437, 1467, 1627, 2926
BspCNI CTCAG 7 cut(s) 465, 688, 937, 1990, 2658, 2703, 2833
BspDI ATCGAT 1 cut(s) 2436
BspFNI CGCG 1 cut(s) 1710
BspHI TCATGA 1 cut(s) 1270
BspLI GGNNCC 3 cut(s) 114, 681, 999
BspMAI CTGCAG 1 cut(s) 2488
BspMI ACCTGC 1 cut(s) 2103
BspPI GGATC 3 cut(s) 1736, 2497, 2621
BspQI GCTCTTC 2 cut(s) 1167, 2540
BspT104I TTCGAA 2 cut(s) 1571, 2696
BspT107I GGYRCC 1 cut(s) 679
BspTI CTTAAG 2 cut(s) 1564, 2186
BspTNI GGTCTC 1 cut(s) 1118
BsrDI GCAATG 2 cut(s) 310, 2541
BsrGI TGTACA 2 cut(s) 121, 951
BsrI ACTGG 6 cut(s) 398, 905, 1163, 1293, 1774, 2037
BssECI CCNNGG 6 cut(s) 375, 975, 1026, 1293, 1359, 1650
BssMI GATC 4 cut(s) 1741, 2489, 2626, 2851
BssNI GRCGYC 1 cut(s) 2265
BssSI CACGAG 1 cut(s) 2379
BssT1I CCWWGG 4 cut(s) 375, 1026, 1293, 1650
Bst2BI CACGAG 1 cut(s) 2379
Bst2UI CCWGG 4 cut(s) 371, 976, 1360, 2174
Bst4CI ACNGT 9 cut(s) 12, 43, 98, 1263, 1925, 2059, 2080, 2117, 2735
Bst6I CTCTTC 2 cut(s) 1167, 2540
BstACI GRCGYC 1 cut(s) 2265
BstAFI CTTAAG 2 cut(s) 1564, 2186
BstAPI GCANNNNNTGC 1 cut(s) 2796
BstAUI TGTACA 2 cut(s) 121, 951
BstBAI YACGTR 1 cut(s) 21
BstBI TTCGAA 2 cut(s) 1571, 2696
BstC8I GCNNGC 4 cut(s) 27, 137, 612, 876
BstDSI CCRYGG 2 cut(s) 375, 1293
BstEII GGTNACC 1 cut(s) 2123
BstF5I GGATG 8 cut(s) 196, 260, 519, 783, 832, 1255, 2182, 2221
BstFNI CGCG 1 cut(s) 1710
BstHHI GCGC 1 cut(s) 1710
BstKTI GATC 4 cut(s) 1744, 2492, 2629, 2854
BstMAI GTCTC 4 cut(s) 148, 518, 1118, 2272
BstMBI GATC 4 cut(s) 1741, 2489, 2626, 2851
BstNI CCWGG 4 cut(s) 371, 976, 1360, 2174
BstNSI RCATGY 1 cut(s) 29
BstPI GGTNACC 1 cut(s) 2123
BstSCI CCNGG 6 cut(s) 369, 529, 974, 1358, 1627, 2172
BstSFI CTRYAG 1 cut(s) 2484
BstSLI GKGCMC 3 cut(s) 20, 82, 1288
BstUI CGCG 1 cut(s) 1710
BstV1I GCAGC 9 cut(s) 233, 443, 562, 874, 1264, 1980, 2020, 2239, 2569
BstV2I GAAGAC 4 cut(s) 973, 1157, 2347, 2705
BstX2I RGATCY 1 cut(s) 2489
BstXI CCANNNNNNTGG 1 cut(s) 794
BstYI RGATCY 1 cut(s) 2489
Bsu15I ATCGAT 1 cut(s) 2436
BsuI GTATCC 2 cut(s) 421, 1766
BsuRI GGCC 9 cut(s) 374, 625, 923, 1146, 1292, 1437, 1467, 1627, 2926
BsuTUI ATCGAT 1 cut(s) 2436
BtgI CCRYGG 2 cut(s) 375, 1293
BtsCI GGATG 8 cut(s) 196, 260, 519, 783, 832, 1255, 2182, 2221
BtsI GCAGTG 1 cut(s) 816
BtsIMutI CAGTG 7 cut(s) 8, 816, 1286, 1767, 2122, 2740, 2838
BveI ACCTGC 1 cut(s) 2103
Cac8I GCNNGC 4 cut(s) 27, 137, 612, 876
CciI TCATGA 1 cut(s) 1270
CfoI GCGC 1 cut(s) 1710
Cfr13I GGNCC 5 cut(s) 623, 1144, 1394, 1613, 1626
ClaI ATCGAT 1 cut(s) 2436
CseI GACGC 1 cut(s) 2273
Csp6I GTAC 7 cut(s) 44, 122, 365, 952, 1317, 1422, 2151
CspCI CAANNNNNGTGG 2 cut(s) 804, 839
CviQI GTAC 7 cut(s) 44, 122, 365, 952, 1317, 1422, 2151
DpnI GATC 4 cut(s) 1743, 2491, 2628, 2853
DpnII GATC 4 cut(s) 1741, 2489, 2626, 2851
DraI TTTAAA 2 cut(s) 1717, 2332
DraIII CACNNNGTG 1 cut(s) 749
EaeI YGGCCR 4 cut(s) 372, 921, 1290, 1465
Eam1104I CTCTTC 2 cut(s) 1167, 2540
EarI CTCTTC 2 cut(s) 1167, 2540
Eco130I CCWWGG 4 cut(s) 375, 1026, 1293, 1650
Eco147I AGGCCT 1 cut(s) 1437
Eco24I GRGCYC 3 cut(s) 453, 1270, 2535
Eco31I GGTCTC 1 cut(s) 1118
Eco47I GGWCC 2 cut(s) 1394, 1613
Eco57I CTGAAG 2 cut(s) 1169, 1309
Eco72I CACGTG 1 cut(s) 21
Eco88I CYCGRG 1 cut(s) 2783
Eco91I GGTNACC 1 cut(s) 2123
EcoO65I GGTNACC 1 cut(s) 2123
EcoRII CCWGG 4 cut(s) 369, 974, 1358, 2172
EcoT14I CCWWGG 4 cut(s) 375, 1026, 1293, 1650
EcoT22I ATGCAT 1 cut(s) 2624
EcoT38I GRGCYC 3 cut(s) 453, 1270, 2535
ErhI CCWWGG 4 cut(s) 375, 1026, 1293, 1650
FalI AAGNNNNNCTT 4 cut(s) 1872, 1904, 2355, 2387
FaqI GGGAC 3 cut(s) 2125, 2126, 2766
FauNDI CATATG 3 cut(s) 118, 993, 1816
Fnu4HI GCNGC 9 cut(s) 222, 457, 551, 888, 1278, 1969, 2034, 2253, 2583
FokI GGATG 8 cut(s) 183, 247, 526, 770, 839, 1262, 2189, 2228
FriOI GRGCYC 3 cut(s) 453, 1270, 2535
Fsp4HI GCNGC 9 cut(s) 222, 457, 551, 888, 1278, 1969, 2034, 2253, 2583
FspBI CTAG 8 cut(s) 54, 107, 177, 293, 510, 521, 584, 2729
GlaI GCGC 1 cut(s) 1709
GluI GCNGC 9 cut(s) 222, 457, 551, 888, 1278, 1969, 2034, 2253, 2583
GsaI CCCAGC 2 cut(s) 228, 2550
GsuI CTGGAG 2 cut(s) 575, 922
HaeIII GGCC 9 cut(s) 374, 625, 923, 1146, 1292, 1437, 1467, 1627, 2926
HapII CCGG 4 cut(s) 531, 626, 1629, 1700
HgaI GACGC 1 cut(s) 2273
HhaI GCGC 1 cut(s) 1710
Hin1I GRCGYC 1 cut(s) 2265
Hin6I GCGC 1 cut(s) 1708
HinP1I GCGC 1 cut(s) 1708
HincII GTYRAC 1 cut(s) 2904
HindII GTYRAC 1 cut(s) 2904
HindIII AAGCTT 1 cut(s) 280
HpaII CCGG 4 cut(s) 531, 626, 1629, 1700
HphI GGTGA 5 cut(s) 196, 559, 1714, 2757, 2861
Hpy166II GTNNAC 6 cut(s) 18, 80, 130, 2092, 2369, 2904
Hpy188I TCNGA 6 cut(s) 315, 427, 478, 720, 1433, 2856
Hpy8I GTNNAC 6 cut(s) 18, 80, 130, 2092, 2369, 2904
HpyCH4III ACNGT 9 cut(s) 12, 43, 98, 1263, 1925, 2059, 2080, 2117, 2735
HpyCH4IV ACGT 1 cut(s) 20
HpySE526I ACGT 1 cut(s) 20
Hsp92I GRCGYC 1 cut(s) 2265
HspAI GCGC 1 cut(s) 1708
Kzo9I GATC 4 cut(s) 1741, 2489, 2626, 2851
LguI GCTCTTC 2 cut(s) 1167, 2540
LmnI GCTCC 6 cut(s) 556, 1003, 1036, 1651, 1954, 2073
Lsp1109I GCAGC 9 cut(s) 233, 443, 562, 874, 1264, 1980, 2020, 2239, 2569
LweI GCATC 4 cut(s) 47, 468, 1264, 2609
MaeI CTAG 8 cut(s) 54, 107, 177, 293, 510, 521, 584, 2729
MaeII ACGT 1 cut(s) 20
MalI GATC 4 cut(s) 1743, 2491, 2628, 2853
MboI GATC 4 cut(s) 1741, 2489, 2626, 2851
MfeI CAATTG 2 cut(s) 1299, 2895
MflI RGATCY 1 cut(s) 2489
MhlI GDGCHC 7 cut(s) 20, 82, 453, 1270, 1288, 2535, 2792
MlsI TGGCCA 4 cut(s) 374, 923, 1292, 1467
MluNI TGGCCA 4 cut(s) 374, 923, 1292, 1467
MlyI GAGTC 3 cut(s) 431, 520, 746
MmeI TCCRAC 5 cut(s) 405, 779, 1237, 1387, 2095
Mox20I TGGCCA 4 cut(s) 374, 923, 1292, 1467
Mph1103I ATGCAT 1 cut(s) 2624
MscI TGGCCA 4 cut(s) 374, 923, 1292, 1467
MslI CAYNNNNRTG 3 cut(s) 13, 464, 2405
Msp20I TGGCCA 4 cut(s) 374, 923, 1292, 1467
MspA1I CMGCKG 3 cut(s) 224, 456, 553
MspCI CTTAAG 2 cut(s) 1564, 2186
MspI CCGG 4 cut(s) 531, 626, 1629, 1700
MspR9I CCNGG 6 cut(s) 371, 531, 976, 1360, 1629, 2174
MunI CAATTG 2 cut(s) 1299, 2895
MvaI CCWGG 4 cut(s) 371, 976, 1360, 2174
MvnI CGCG 1 cut(s) 1710
NciI CCSGG 2 cut(s) 531, 1629
NcoI CCATGG 2 cut(s) 375, 1293
NdeI CATATG 3 cut(s) 118, 993, 1816
NdeII GATC 4 cut(s) 1741, 2489, 2626, 2851
NlaIV GGNNCC 3 cut(s) 114, 681, 999
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 4 cut(s) 749, 1165, 1732, 1765
NsiI ATGCAT 1 cut(s) 2624
NspI RCATGY 1 cut(s) 29
NspV TTCGAA 2 cut(s) 1571, 2696
OliI CACNNNNGTG 2 cut(s) 13, 2405
PaeI GCATGC 1 cut(s) 29
PagI TCATGA 1 cut(s) 1270
PceI AGGCCT 1 cut(s) 1437
PciSI GCTCTTC 2 cut(s) 1167, 2540
PfeI GAWTC 8 cut(s) 415, 629, 1663, 2169, 2759, 2801, 2816, 2857
PflMI CCANNNNNTGG 1 cut(s) 1656
PfoI TCCNGGA 2 cut(s) 529, 2172
PkrI GCNGC 9 cut(s) 223, 458, 552, 889, 1279, 1970, 2035, 2254, 2584
PleI GAGTC 3 cut(s) 430, 520, 746
PmaCI CACGTG 1 cut(s) 21
PmlI CACGTG 1 cut(s) 21
PpsI GAGTC 3 cut(s) 430, 520, 746
Ppu21I YACGTR 1 cut(s) 21
PsiI TTATAA 1 cut(s) 2102
Psp6I CCWGG 4 cut(s) 369, 974, 1358, 2172
PspCI CACGTG 1 cut(s) 21
PspEI GGTNACC 1 cut(s) 2123
PspFI CCCAGC 2 cut(s) 224, 2546
PspGI CCWGG 4 cut(s) 369, 974, 1358, 2172
PspN4I GGNNCC 3 cut(s) 114, 681, 999
PspPI GGNCC 5 cut(s) 623, 1144, 1394, 1613, 1626
PstI CTGCAG 1 cut(s) 2488
PsuI RGATCY 1 cut(s) 2489
PvuII CAGCTG 3 cut(s) 224, 456, 553
RsaI GTAC 7 cut(s) 45, 123, 366, 953, 1318, 1423, 2152
RsaNI GTAC 7 cut(s) 44, 122, 365, 952, 1317, 1422, 2151
RseI CAYNNNNRTG 3 cut(s) 13, 464, 2405
SapI GCTCTTC 2 cut(s) 1167, 2540
SatI GCNGC 9 cut(s) 222, 457, 551, 888, 1278, 1969, 2034, 2253, 2583
Sau3AI GATC 4 cut(s) 1741, 2489, 2626, 2851
Sau96I GGNCC 5 cut(s) 623, 1144, 1394, 1613, 1626
SchI GAGTC 3 cut(s) 431, 520, 746
ScrFI CCNGG 6 cut(s) 371, 531, 976, 1360, 1629, 2174
SduI GDGCHC 7 cut(s) 20, 82, 453, 1270, 1288, 2535, 2792
SfaNI GCATC 4 cut(s) 47, 468, 1264, 2609
SfcI CTRYAG 1 cut(s) 2484
SfuI TTCGAA 2 cut(s) 1571, 2696
SinI GGWCC 2 cut(s) 1394, 1613
SmiMI CAYNNNNRTG 3 cut(s) 13, 464, 2405
SmlI CTYRAG 5 cut(s) 419, 759, 1564, 2186, 2614
SmoI CTYRAG 5 cut(s) 419, 759, 1564, 2186, 2614
SphI GCATGC 1 cut(s) 29
SseBI AGGCCT 1 cut(s) 1437
SsiI CCGC 5 cut(s) 133, 182, 867, 878, 1710
SspMI CTAG 8 cut(s) 54, 107, 177, 293, 510, 521, 584, 2729
StuI AGGCCT 1 cut(s) 1437
StyD4I CCNGG 6 cut(s) 369, 529, 974, 1358, 1627, 2172
StyI CCWWGG 4 cut(s) 375, 1026, 1293, 1650
TaaI ACNGT 9 cut(s) 12, 43, 98, 1263, 1925, 2059, 2080, 2117, 2735
TaiI ACGT 1 cut(s) 23
TaqI TCGA 4 cut(s) 1571, 2303, 2436, 2696
TatI WGTACW 4 cut(s) 121, 364, 951, 1316
TfiI GAWTC 8 cut(s) 415, 629, 1663, 2169, 2759, 2801, 2816, 2857
TscAI CASTG 7 cut(s) 15, 816, 1293, 1774, 2122, 2740, 2845
TseFI GTSAC 4 cut(s) 749, 1165, 1732, 1765
TseI GCWGC 9 cut(s) 221, 456, 550, 887, 1277, 1968, 2033, 2252, 2582
Tsp45I GTSAC 4 cut(s) 749, 1165, 1732, 1765
TspRI CASTG 7 cut(s) 15, 816, 1293, 1774, 2122, 2740, 2845
Van91I CCANNNNNTGG 1 cut(s) 1656
Vha464I CTTAAG 2 cut(s) 1564, 2186
VneI GTGCAC 2 cut(s) 16, 78
VpaK11BI GGWCC 2 cut(s) 1394, 1613
XbaI TCTAGA 2 cut(s) 520, 583
XceI RCATGY 1 cut(s) 29
XspI CTAG 8 cut(s) 54, 107, 177, 293, 510, 521, 584, 2729
Zsp2I ATGCAT 1 cut(s) 2624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.