Prupe.1G399700_v2.0.a1

Glutamate receptor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35326875 .. 35331333
4459 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G399700.1

Sequence Viewer

Length: 2958 bp
ATGAAAATAAAAAAGAACCCAACCATTATTCTTGCTCCTTTTATCCTTTTGCGCTTTCTCTTCTTCTTCTCATGGATTTTTAATATAGCTGCGGCTGCAGCGGCTGTGGAAAACACAAAGATTCCGGTGAATGTGGGTGTTGTTGTTGACCTAGATGCTCCCAGTGGGAAGACTTATCTGAGTTGCATCAAAATGGCCCTCCCGGACTTTTATGCATCTCATGCTCACTTCAACACCAGGCTGGTTTTGCACACCAGGAACTCCAACCAAACTGTTGTTGGTGCAGCTGCTGCAGCTTTGGATCTGATAAAGAATGTAGAAGTGCAAGCAATCCTGGGACCAGAGACATCGATGCAGGCCAGCTTCGTTGTCAATCTTGGAGACGAAGCTCATGTGCCCATTGTATCATTTTCTGCATCAAGTCCCTCTCTTGCTTCGCTTCGGAGCCCCTACTTCTTCCGAGTTACACAGACTGACTCATACCAAGTGAAGGCCATAAGTTCCATTGTTAAAAATTTTGGATGGAGACATGTTGTGCCGATTTACGTGGACAATACGTTTGGGGAGGGAGTCATACCCTTTTTAGTTGATGCATTGCAAAAAGTTGATGCTCATGTCCCCTATCGGAGTGTCATCCCCCCATCAGCCACTGATGAACAAATCGAGAAAGAGCTTTACAAGTTGATGACCATGCAAACTAGAGTCTTCATTGTGCATATGATGCCCCATCTTTGTTCTAAACTATTTGCCATGGCAAATAAGATTGGAATGATGAGTGAAGGCTATGTTTGGATCACGACGAATGGGGCTGGTAATCGTTTGAGGTCATTGGGACCGGTCGTCTTGAGTTCCATGCAAGGGGTTCTAGGTGTGGAAACAGAGGTTCCAACAACAATGGAGCTTACAGAATTCAAAATGCGGTGGAAAAGGCAATTCCAACAAGACAATCCGGCCATCATTGATGTCTATGTGGACGTGATTGGCCTTCGGGCTTATGATGCTGCTTTTGCACTAGCCTTGGCAGCTGAACAAGTTGGGGATACAAGCTTTAGTTTCCAAGAGAGAAATGGTTCCTTCAGCTCAACAGATCTTGATACTTTTAAGGTCTCTCAATATGGTCCAAAGCTTGCCCAGGCCTTATCAAATACTAGATTCAAAGGCATAGCTGGAGACTTTAGTCTTGACTGTGGGCAACTTCAATCATCAAGATTTCAGATACTCAATGTAAATGGTGACGGAGTAAGAACAATTGCATTCTGGACACCGGAAAATGGTATGGTGAAAACATTGAGTTCAACAAACACCAGTATACTTTCAACTTCCGAGAAGTGCGATTTTGGAACCATCATATGGCCTGGAGATTCTCTGTCTGTTCCTAAAGGATGGGAGATCCCAACAAGTGGCAAGAAGTTGAAAATAGGAGTTCCTGTGAAGGTTGGTTTTACTGAGTTTGTTAAGGTAACCAAGATTCCTAGCACAAACACAACAGATGTTACGGGGTTCAGTATCGATGTCTTTAATGCTGCAGTGGAAGTATTACCATACGCTCTTCCTTTTGAGTTCATTCCCTTTGAAAATCCTGACGGCACTAGCGCTGGCACTTACAATGATTTGGTCTATCAAGTCTATCTTGAGAAGTATGATGCTGTGGTGGGAGACACAACAATTAGAGCAAATAGATCATTGTATGTAGACTTCACAATGCCATACACAGAATCTGGTGTAGTAATGGTTGTGCCAATAAGAGACACCAGAAGAAAATGTGCATGGGTTTTCTTGAAACCTTTGACTTGGGACCTCTGGCTTACAACTTTTTGTTTCTTCATCTTCATTGGTTTTGTTGTTTGGGTGCTGGAACATCGAATTAACGAAGATTTTCGTGGCCCTCCCTCACATCAAGTTGGCACAAGTTTCTGGTTCTCTTTCTCAACCATGGTCTTTTCACATAGGGAGAGAGTGGTTAGCAATTTGGCTAGATTTTTGATGATTATATGGGTGTTTGTTGTGCTAGTATTGACACAAAGTTACACAGCTAATCTAGCATCACTATTAACAGTGGAACAGCTCCAACCAACTGTCACTGATATAAAGGATCTTCTGAGGAACGGGGATAATGTCGGCTATATAGAGAACACTTATGTTTGTGAAATCTTGAAACAACTCGGTTTTGACAACTCCAAGCTTAAGCCCATCAAAACCATGGAAGAATGTGATGTAGCTCTTTCGAAAGGGAGTGCAAAGGGTGGTATTGCTGCTGTTGTTGATGAAATTCCAAACATGAAGCTTCTTGTTGCAAAATATTGTTCCAAGTATACCATGATTGGTCCAATCTTCAAAACTGATGGCTTTGCCTTTGTGTTTCCGAAACATTCCCCTCTAGTACCTGATCTTTCACAGGCGGTCCTAAATGTGACTGGAGGAGAGAAGATCATGAACATTGAGAACAAATGGTTCAGTCAAGAAAGCAAGTGTGAAGATAAGTCCACTACTCCAAGGGTCTCAAGCAATAGTCTTGGACTTGAAAGCTTTTGGGGCCTCTTCCTCATTGCTGGGATGGCTTCAATTCTAGCTCTCATTATCTTTTTAGCTTCCTTCCTGTACAAGCATAGGCATGTCTTGAAGCAATCTGATTCAAGAGCTTCTAAATGGAGACGGGTTCGAGCCATGTTTGAAATTTTCAACGACAAAGACATCAGCTCCCATACTTTCAAAAGCAGTCAACAAAGAGATGGAATTGGTGGTGTTGGAGATGAAGTGAAAGCCTCACCAAATAGCAACTGGCCTGAAAGTCCATTCAGCTATTTGGACCACACAGACATGGACTTTGTATTGTTTGAAGGGCAACAAACGCCATCTACTACTAGTCATGCGTCTCCGGAGATAGTTCCAAAAATTGAGCATGATATTATCACTGTTCAAGAAATGCATACAACTCCTGTAACAGATCGTTTGGCTTAG

Protein Analysis

986

Amino Acids

109.63

Weight (kDa)

6.37

Isoelectric Point (pI)

34.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1350, 1400
AccI GTMKAC 3 cut(s) 1309, 1692, 2312
AccIII TCCGGA 1 cut(s) 2875
AciI CCGC 4 cut(s) 92, 101, 919, 2399
AclWI GGATC 4 cut(s) 309, 800, 1384, 2100
AcoI YGGCCR 1 cut(s) 951
AcsI RAATTY 4 cut(s) 514, 908, 2268, 2673
AcuI CTGAAG 1 cut(s) 1060
AfaI GTAC 2 cut(s) 2382, 2600
AfeI AGCGCT 1 cut(s) 1594
AfiI CCNNNNNNNGG 5 cut(s) 490, 858, 1271, 1350, 1400
AflII CTTAAG 1 cut(s) 2183
AflIII ACRYGT 1 cut(s) 529
AgeI ACCGGT 1 cut(s) 835
AhdI GACNNNNNGTC 1 cut(s) 839
AhlI ACTAGT 1 cut(s) 2861
AjiI CACGTC 1 cut(s) 976
AjnI CCWGG 5 cut(s) 236, 254, 333, 1131, 1354
AlwI GGATC 4 cut(s) 309, 800, 1384, 2100
AlwNI CAGNNNCTG 4 cut(s) 104, 290, 650, 1718
Aor13HI TCCGGA 1 cut(s) 2875
Aor51HI AGCGCT 1 cut(s) 1594
ApoI RAATTY 4 cut(s) 514, 908, 2268, 2673
ArsI GACNNNNNNTTYG 4 cut(s) 542, 574, 2807, 2839
AsiGI ACCGGT 1 cut(s) 835
Asp700I GAANNNNTTC 2 cut(s) 1069, 1875
AspLEI GCGC 2 cut(s) 54, 1595
AsuC2I CCSGG 1 cut(s) 203
AsuHPI GGTGA 4 cut(s) 139, 1244, 1291, 2757
AsuII TTCGAA 1 cut(s) 2225
AvaII GGWCC 7 cut(s) 338, 833, 1118, 1795, 2324, 2401, 2806
BaeGI GKGCMC 1 cut(s) 399
BanII GRGCYC 1 cut(s) 449
BarI GAAGNNNNNNTAC 2 cut(s) 1679, 1711
BbsI GAAGAC 2 cut(s) 176, 697
BceAI ACGGC 1 cut(s) 1600
BciT130I CCWGG 5 cut(s) 238, 256, 335, 1133, 1356
BciVI GTATCC 1 cut(s) 1033
BcnI CCSGG 1 cut(s) 203
BcuI ACTAGT 1 cut(s) 2861
BfmI CTRYAG 3 cut(s) 96, 291, 1524
BfoI RGCGCY 1 cut(s) 1596
BfrI CTTAAG 1 cut(s) 2183
BfuI GTATCC 1 cut(s) 1033
BglII AGATCT 1 cut(s) 1087
Bme1390I CCNGG 6 cut(s) 203, 238, 256, 335, 1133, 1356
Bme18I GGWCC 7 cut(s) 338, 833, 1118, 1795, 2324, 2401, 2806
BmeRI GACNNNNNGTC 1 cut(s) 839
BmgBI CACGTC 1 cut(s) 976
BmiI GGNNCC 8 cut(s) 339, 446, 834, 885, 1072, 1342, 1796, 2534
BmrFI CCNGG 6 cut(s) 203, 238, 256, 335, 1133, 1356
BmrI ACTGGG 1 cut(s) 156
BmuI ACTGGG 1 cut(s) 156
BoxI GACNNNNGTC 1 cut(s) 1176
BpiI GAAGAC 2 cut(s) 176, 697
BpmI CTGGAG 3 cut(s) 1188, 1377, 2436
Bpu14I TTCGAA 1 cut(s) 2225
BpuEI CTTGAG 3 cut(s) 865, 1652, 2485
BpuMI CCSGG 1 cut(s) 203
Bsa29I ATCGAT 2 cut(s) 350, 1509
BsaAI YACGTR 1 cut(s) 547
BsaI GGTCTC 2 cut(s) 1111, 2503
BsaJI CCNNGG 7 cut(s) 334, 750, 1017, 1131, 1932, 2199, 2492
BsaWI WCCGGW 4 cut(s) 124, 835, 1264, 2875
BsaXI ACNNNNNCTCC 6 cut(s) 1413, 1443, 2681, 2711, 2739, 2769
Bsc4I CCNNNNNNNGG 5 cut(s) 490, 858, 1271, 1350, 1400
Bse118I RCCGGY 1 cut(s) 835
Bse1I ACTGG 4 cut(s) 162, 1305, 2419, 2783
Bse3DI GCAATG 2 cut(s) 593, 2544
BseAI TCCGGA 1 cut(s) 2875
BseBI CCWGG 5 cut(s) 238, 256, 335, 1133, 1356
BseCI ATCGAT 2 cut(s) 350, 1509
BseDI CCNNGG 7 cut(s) 334, 750, 1017, 1131, 1932, 2199, 2492
BseGI GGATG 4 cut(s) 527, 633, 1388, 2559
BseLI CCNNNNNNNGG 5 cut(s) 490, 858, 1271, 1350, 1400
BseMI GCAATG 2 cut(s) 593, 2544
BseMII CTCAG 3 cut(s) 170, 1437, 2090
BseNI ACTGG 4 cut(s) 162, 1305, 2419, 2783
BseRI GAGGAG 1 cut(s) 2433
BseSI GKGCMC 1 cut(s) 399
BseYI CCCAGC 1 cut(s) 2549
BsgI GTGCAG 1 cut(s) 303
Bsh1285I CGRYCG 1 cut(s) 840
BshTI ACCGGT 1 cut(s) 835
BshVI ATCGAT 2 cut(s) 350, 1509
BsiEI CGRYCG 1 cut(s) 840
BsiSI CCGG 6 cut(s) 125, 203, 836, 950, 1265, 2876
BslFI GGGAC 5 cut(s) 351, 408, 602, 846, 1808
BslI CCNNNNNNNGG 5 cut(s) 490, 858, 1271, 1350, 1400
BsmBI CGTCTC 3 cut(s) 375, 2644, 2877
BsmFI GGGAC 5 cut(s) 351, 408, 602, 846, 1808
BsmI GAATGC 1 cut(s) 1253
Bso31I GGTCTC 2 cut(s) 1111, 2503
Bsp119I TTCGAA 1 cut(s) 2225
Bsp1286I GDGCHC 2 cut(s) 399, 449
Bsp13I TCCGGA 1 cut(s) 2875
Bsp1407I TGTACA 1 cut(s) 2598
Bsp143I GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
Bsp19I CCATGG 3 cut(s) 750, 1932, 2199
BspACI CCGC 4 cut(s) 92, 101, 919, 2399
BspCNI CTCAG 3 cut(s) 171, 1438, 2091
BspDI ATCGAT 2 cut(s) 350, 1509
BspEI TCCGGA 1 cut(s) 2875
BspHI TCATGA 1 cut(s) 2430
BspLI GGNNCC 8 cut(s) 339, 446, 834, 885, 1072, 1342, 1796, 2534
BspMAI CTGCAG 3 cut(s) 100, 295, 1528
BspPI GGATC 4 cut(s) 309, 800, 1384, 2100
BspQI GCTCTTC 1 cut(s) 1554
BspT104I TTCGAA 1 cut(s) 2225
BspTI CTTAAG 1 cut(s) 2183
BspTNI GGTCTC 2 cut(s) 1111, 2503
BsrDI GCAATG 2 cut(s) 593, 2544
BsrFI RCCGGY 1 cut(s) 835
BsrGI TGTACA 1 cut(s) 2598
BsrI ACTGG 4 cut(s) 162, 1305, 2419, 2783
BssAI RCCGGY 1 cut(s) 835
BssECI CCNNGG 7 cut(s) 334, 750, 1017, 1131, 1932, 2199, 2492
BssMI GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
BssNAI GTATAC 2 cut(s) 1310, 2313
BssT1I CCWWGG 5 cut(s) 750, 1017, 1932, 2199, 2492
Bst1107I GTATAC 2 cut(s) 1310, 2313
Bst2UI CCWGG 5 cut(s) 238, 256, 335, 1133, 1356
Bst4CI ACNGT 5 cut(s) 274, 1187, 2056, 2077, 2914
Bst6I CTCTTC 3 cut(s) 65, 1554, 2543
BstAFI CTTAAG 1 cut(s) 2183
BstAPI GCANNNNNTGC 3 cut(s) 221, 290, 721
BstAUI TGTACA 1 cut(s) 2598
BstBAI YACGTR 1 cut(s) 547
BstBI TTCGAA 1 cut(s) 2225
BstC8I GCNNGC 5 cut(s) 327, 357, 361, 1128, 1597
BstDEI CTNAG 4 cut(s) 179, 1446, 2099, 2955
BstDSI CCRYGG 3 cut(s) 750, 1932, 2199
BstEII GGTNACC 1 cut(s) 1459
BstF5I GGATG 4 cut(s) 527, 633, 1388, 2559
BstH2I RGCGCY 1 cut(s) 1596
BstHHI GCGC 2 cut(s) 54, 1595
BstKTI GATC 9 cut(s) 304, 795, 1090, 1392, 1682, 2095, 2389, 2430, 2947
BstMBI GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
BstMCI CGRYCG 1 cut(s) 840
BstNI CCWGG 5 cut(s) 238, 256, 335, 1133, 1356
BstNSI RCATGY 2 cut(s) 533, 2615
BstPAI GACNNNNGTC 1 cut(s) 1176
BstPI GGTNACC 1 cut(s) 1459
BstSCI CCNGG 6 cut(s) 201, 236, 254, 333, 1131, 1354
BstSFI CTRYAG 3 cut(s) 96, 291, 1524
BstSLI GKGCMC 1 cut(s) 399
BstV2I GAAGAC 2 cut(s) 176, 697
BstX2I RGATCY 4 cut(s) 301, 1087, 1389, 2092
BstYI RGATCY 4 cut(s) 301, 1087, 1389, 2092
BstZ17I GTATAC 2 cut(s) 1310, 2313
Bsu15I ATCGAT 2 cut(s) 350, 1509
BsuI GTATCC 1 cut(s) 1033
BsuTUI ATCGAT 2 cut(s) 350, 1509
BtgI CCRYGG 3 cut(s) 750, 1932, 2199
BtrI CACGTC 1 cut(s) 976
BtsCI GGATG 4 cut(s) 527, 633, 1388, 2559
BtsI GCAGTG 1 cut(s) 1533
BtsIMutI CAGTG 6 cut(s) 169, 648, 1533, 2061, 2079, 2910
Cac8I GCNNGC 5 cut(s) 327, 357, 361, 1128, 1597
CaiI CAGNNNCTG 4 cut(s) 104, 290, 650, 1718
CciI TCATGA 1 cut(s) 2430
CfoI GCGC 2 cut(s) 54, 1595
Cfr10I RCCGGY 1 cut(s) 835
ClaI ATCGAT 2 cut(s) 350, 1509
CseI GACGC 1 cut(s) 2859
Csp6I GTAC 2 cut(s) 2381, 2599
CspAI ACCGGT 1 cut(s) 835
CviQI GTAC 2 cut(s) 2381, 2599
DdeI CTNAG 4 cut(s) 179, 1446, 2099, 2955
DpnI GATC 9 cut(s) 303, 794, 1089, 1391, 1681, 2094, 2388, 2429, 2946
DpnII GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
DriI GACNNNNNGTC 1 cut(s) 839
EaeI YGGCCR 1 cut(s) 951
Eam1104I CTCTTC 3 cut(s) 65, 1554, 2543
Eam1105I GACNNNNNGTC 1 cut(s) 839
EarI CTCTTC 3 cut(s) 65, 1554, 2543
Eco130I CCWWGG 5 cut(s) 750, 1017, 1932, 2199, 2492
Eco147I AGGCCT 1 cut(s) 1136
Eco24I GRGCYC 1 cut(s) 449
Eco31I GGTCTC 2 cut(s) 1111, 2503
Eco47I GGWCC 7 cut(s) 338, 833, 1118, 1795, 2324, 2401, 2806
Eco47III AGCGCT 1 cut(s) 1594
Eco57I CTGAAG 1 cut(s) 1060
Eco91I GGTNACC 1 cut(s) 1459
EcoO109I RGGNCCY 2 cut(s) 1795, 2533
EcoO65I GGTNACC 1 cut(s) 1459
EcoRI GAATTC 1 cut(s) 908
EcoRII CCWGG 5 cut(s) 236, 254, 333, 1131, 1354
EcoT14I CCWWGG 5 cut(s) 750, 1017, 1932, 2199, 2492
EcoT22I ATGCAT 3 cut(s) 217, 595, 2928
EcoT38I GRGCYC 1 cut(s) 449
ErhI CCWWGG 5 cut(s) 750, 1017, 1932, 2199, 2492
Esp3I CGTCTC 3 cut(s) 375, 2644, 2877
FalI AAGNNNNNCTT 2 cut(s) 1614, 1646
FaqI GGGAC 5 cut(s) 351, 408, 602, 846, 1808
FauNDI CATATG 2 cut(s) 717, 1349
FblI GTMKAC 3 cut(s) 1309, 1692, 2312
FokI GGATG 4 cut(s) 534, 620, 1395, 2566
FriOI GRGCYC 1 cut(s) 449
GlaI GCGC 2 cut(s) 53, 1594
GsaI CCCAGC 1 cut(s) 2553
GsuI CTGGAG 3 cut(s) 1188, 1377, 2436
HaeII RGCGCY 1 cut(s) 1596
HapII CCGG 6 cut(s) 125, 203, 836, 950, 1265, 2876
HgaI GACGC 1 cut(s) 2859
HhaI GCGC 2 cut(s) 54, 1595
Hin6I GCGC 2 cut(s) 52, 1593
HinP1I GCGC 2 cut(s) 52, 1593
HincII GTYRAC 2 cut(s) 148, 2720
HindII GTYRAC 2 cut(s) 148, 2720
HindIII AAGCTT 5 cut(s) 1045, 1124, 2180, 2282, 2524
HinfI GANTC 9 cut(s) 121, 476, 570, 702, 1152, 1361, 1468, 1715, 2630
HpaII CCGG 6 cut(s) 125, 203, 836, 950, 1265, 2876
HphI GGTGA 4 cut(s) 139, 1244, 1291, 2757
Hpy166II GTNNAC 8 cut(s) 148, 550, 973, 1310, 1693, 2313, 2484, 2720
Hpy8I GTNNAC 8 cut(s) 148, 550, 973, 1310, 1693, 2313, 2484, 2720
Hpy99I CGWCG 1 cut(s) 802
HpyAV CCTTC 7 cut(s) 484, 773, 995, 1084, 1426, 2602, 2831
HpyCH4III ACNGT 5 cut(s) 274, 1187, 2056, 2077, 2914
HpyCH4IV ACGT 3 cut(s) 546, 557, 975
HpyF3I CTNAG 4 cut(s) 179, 1446, 2099, 2955
HpySE526I ACGT 3 cut(s) 546, 557, 975
HspAI GCGC 2 cut(s) 52, 1593
Kpn2I TCCGGA 1 cut(s) 2875
Kzo9I GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
LguI GCTCTTC 1 cut(s) 1554
LmnI GCTCC 6 cut(s) 40, 163, 444, 898, 2070, 2702
MaeII ACGT 3 cut(s) 546, 557, 975
MaeIII GTNAC 8 cut(s) 463, 1232, 1459, 1492, 2024, 2077, 2410, 2938
MalI GATC 9 cut(s) 303, 794, 1089, 1391, 1681, 2094, 2388, 2429, 2946
MboI GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
MfeI CAATTG 1 cut(s) 1248
MflI RGATCY 4 cut(s) 301, 1087, 1389, 2092
MhlI GDGCHC 2 cut(s) 399, 449
MlyI GAGTC 3 cut(s) 470, 579, 711
MmeI TCCRAC 5 cut(s) 288, 911, 961, 2092, 2725
Mph1103I ATGCAT 3 cut(s) 217, 595, 2928
MroI TCCGGA 1 cut(s) 2875
MroXI GAANNNNTTC 2 cut(s) 1069, 1875
MseI TTAA 8 cut(s) 81, 510, 1101, 1455, 1518, 1866, 2051, 2184
MslI CAYNNNNRTG 3 cut(s) 191, 2610, 2816
MspA1I CMGCKG 3 cut(s) 101, 287, 1025
MspCI CTTAAG 1 cut(s) 2183
MspI CCGG 6 cut(s) 125, 203, 836, 950, 1265, 2876
MspR9I CCNGG 6 cut(s) 203, 238, 256, 335, 1133, 1356
MunI CAATTG 1 cut(s) 1248
Mva1269I GAATGC 1 cut(s) 1253
MvaI CCWGG 5 cut(s) 238, 256, 335, 1133, 1356
NciI CCSGG 1 cut(s) 203
NcoI CCATGG 3 cut(s) 750, 1932, 2199
NdeI CATATG 2 cut(s) 717, 1349
NdeII GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
NlaIV GGNNCC 8 cut(s) 339, 446, 834, 885, 1072, 1342, 1796, 2534
NmuCI GTSAC 3 cut(s) 1232, 2077, 2410
NsiI ATGCAT 3 cut(s) 217, 595, 2928
NspI RCATGY 2 cut(s) 533, 2615
NspV TTCGAA 1 cut(s) 2225
PagI TCATGA 1 cut(s) 2430
PceI AGGCCT 1 cut(s) 1136
PciI ACATGT 1 cut(s) 529
PciSI GCTCTTC 1 cut(s) 1554
PctI GAATGC 1 cut(s) 1253
PdmI GAANNNNTTC 2 cut(s) 1069, 1875
PfeI GAWTC 6 cut(s) 121, 1152, 1361, 1468, 1715, 2630
PflMI CCANNNNNTGG 2 cut(s) 1350, 1400
PfoI TCCNGGA 1 cut(s) 201
PinAI ACCGGT 1 cut(s) 835
PleI GAGTC 3 cut(s) 470, 578, 710
PpsI GAGTC 3 cut(s) 470, 578, 710
Ppu21I YACGTR 1 cut(s) 547
PpuMI RGGWCCY 1 cut(s) 1795
PscI ACATGT 1 cut(s) 529
PshAI GACNNNNGTC 1 cut(s) 1176
Psp5II RGGWCCY 1 cut(s) 1795
Psp6I CCWGG 5 cut(s) 236, 254, 333, 1131, 1354
PspEI GGTNACC 1 cut(s) 1459
PspFI CCCAGC 1 cut(s) 2549
PspGI CCWGG 5 cut(s) 236, 254, 333, 1131, 1354
PspN4I GGNNCC 8 cut(s) 339, 446, 834, 885, 1072, 1342, 1796, 2534
PspPPI RGGWCCY 1 cut(s) 1795
PstI CTGCAG 3 cut(s) 100, 295, 1528
PstNI CAGNNNCTG 4 cut(s) 104, 290, 650, 1718
PsuI RGATCY 4 cut(s) 301, 1087, 1389, 2092
PvuII CAGCTG 2 cut(s) 287, 1025
RsaI GTAC 2 cut(s) 2382, 2600
RsaNI GTAC 2 cut(s) 2381, 2599
RseI CAYNNNNRTG 3 cut(s) 191, 2610, 2816
SapI GCTCTTC 1 cut(s) 1554
SaqAI TTAA 8 cut(s) 81, 510, 1101, 1455, 1518, 1866, 2051, 2184
Sau3AI GATC 9 cut(s) 301, 792, 1087, 1389, 1679, 2092, 2386, 2427, 2944
SchI GAGTC 3 cut(s) 470, 579, 711
ScrFI CCNGG 6 cut(s) 203, 238, 256, 335, 1133, 1356
SduI GDGCHC 2 cut(s) 399, 449
SfcI CTRYAG 3 cut(s) 96, 291, 1524
SfuI TTCGAA 1 cut(s) 2225
SinI GGWCC 7 cut(s) 338, 833, 1118, 1795, 2324, 2401, 2806
SmiMI CAYNNNNRTG 3 cut(s) 191, 2610, 2816
SmlI CTYRAG 4 cut(s) 844, 1631, 2183, 2500
SmoI CTYRAG 4 cut(s) 844, 1631, 2183, 2500
SpeI ACTAGT 1 cut(s) 2861
SseBI AGGCCT 1 cut(s) 1136
SsiI CCGC 4 cut(s) 92, 101, 919, 2399
SspI AATATT 1 cut(s) 2300
StuI AGGCCT 1 cut(s) 1136
StyD4I CCNGG 6 cut(s) 201, 236, 254, 333, 1131, 1354
StyI CCWWGG 5 cut(s) 750, 1017, 1932, 2199, 2492
TaaI ACNGT 5 cut(s) 274, 1187, 2056, 2077, 2914
TaiI ACGT 3 cut(s) 549, 560, 978
TaqI TCGA 6 cut(s) 350, 663, 1509, 1861, 2225, 2659
TatI WGTACW 1 cut(s) 2598
TauI GCSGC 2 cut(s) 95, 104
TfiI GAWTC 6 cut(s) 121, 1152, 1361, 1468, 1715, 2630
Tru1I TTAA 8 cut(s) 81, 510, 1101, 1455, 1518, 1866, 2051, 2184
Tru9I TTAA 8 cut(s) 81, 510, 1101, 1455, 1518, 1866, 2051, 2184
TscAI CASTG 6 cut(s) 169, 655, 1533, 2061, 2086, 2917
TseFI GTSAC 3 cut(s) 1232, 2077, 2410
Tsp45I GTSAC 3 cut(s) 1232, 2077, 2410
TspGWI ACGGA 1 cut(s) 1251
TspRI CASTG 6 cut(s) 169, 655, 1533, 2061, 2086, 2917
Van91I CCANNNNNTGG 2 cut(s) 1350, 1400
Vha464I CTTAAG 1 cut(s) 2183
VpaK11BI GGWCC 7 cut(s) 338, 833, 1118, 1795, 2324, 2401, 2806
XapI RAATTY 4 cut(s) 514, 908, 2268, 2673
XceI RCATGY 2 cut(s) 533, 2615
XcmI CCANNNNNNNNNTGG 4 cut(s) 275, 1064, 2197, 2775
XmiI GTMKAC 3 cut(s) 1309, 1692, 2312
XmnI GAANNNNTTC 2 cut(s) 1069, 1875
Zsp2I ATGCAT 3 cut(s) 217, 595, 2928
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.