Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

24354845 .. 24361511

Gene Structure 6667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g31980.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGTGTCTTCTTCCTCAACCCGTGGCATCAATTTCAAACTTTCCAAGAGATTTAAAAATTATGGAGATTTTTATCAACATTACGTTTCTTCTCCTCTTATTCTTTAGGATTTCCCTGGCTTTGGCACAGAACACAACAATTTCAATAAATGTGGGTGTGGTTCTTGACTTGGATAATCCAGTTGGCAAAATGGGGCTAAGCTGCATCAACATGGCTCTCTCTGATTTCTATGCCTCTCATGCTTACTATCGTACTAGGCTCGTCTTACACACAAGGGACTCCTCGAAAGATGTTGTTGTTGCAGCTGCTGCAGCTCTAGAGTTGATAAACAGTGTTAAAGTGCAAGCGATCATAGGGCCAGAATCATCAATGCAAGCAAGTTTTGTAACTGAACTTGGAGATAAAGCACAGGTTCCCATAATCTCCTTTACAGCAACAAGCTCTGCCATTCAGAGTTCATATTTTTTCAGAATTGCACAAAATGACACATCTCAAGTGAAAGCCATATGTGACCTCATCCAGGCCTTTCAGTGGAGTGAAGCAGTGCCCATCACCGTTGACAACGAGTTCGGGAAGGGAATAATACCATATCTGACTACTGCTTTGCAAGCGGTTGGTGCTCGCATCCCCTACTGGGTTGTCATTCCTCAAATGGCCACTGCAGACCAAATTGACGAAGAACTTGACAAGTTGATGAAAATGCAAATCAGGGTCTTCATAGTGCATATGTTGCCTTCTCTTGGCACTCGGCTTTTCGCAAGGGCAAAGGAATTGGGAATGATGGATGAAGGCTTTGCATGGATAGTGACAAATGCGATCTCTAACTATTACGGTTCCTTGGATTCGTCTTTTATAGACAACATGCAAGGTGTATTGGGTTTAAAGGCTTATGTTCCAAATACAAAAGATCTTGAAAATTTTAGAGGTAGATGGCAAAAGAGATTTCAACAAGACAATTCGACACTATCGAGTGTGAGCTTGAATGTTTTTGGACTCTGGGCTTATGATGCTGCTTGGTCACTAGCCATTGCAGTTGAAAAGGTTAACACTACTACCTTCAACTTCAAAAACATGAACATTTCCGCAGGTAGTTCCACTGGTTTAGATAGATTGGAGATCTCTCAAAGTGGCCCTAAACTTGTCCAAGAACTATCAAGTACAAGATTCATAGGACTCTCAGGAGATTTCAGTCTTCTTGACCGGCAGCTACAGTCATCAAACTTTCAGGTAGTTAATGTGAATGATAATGGGGAAAGAGGGATTGGATATTGGACACCCCAAAATGGACTTGTAAGAAACTTAAATTCGAAAAACACGAGTACTTTTATTGCCAGCCTTGGTCCTGTTATATGGCCCGGAGACACCACCTCAGCTCCAAAAGGTTGGCAGATTCCTACTGGGGGGAAATTGAAGGTTCTAGTCCCGGTCAAGATTGGTTTTCTAGAGTTTGTAAACGCAAGTACGGATCCAACCACTAACACAACTGTTTTCAGTGGATACTGCATAGATGTCTTTAATGCTGTAATGAAATCAATGCCATACTCTGTTCCTTATGAGTTCCATCCCTTTGCAAAGCCTAATAGTGAGAGCGCTGGTAGCTACAATGATTTGGTTTATCTAGTGTTTCTTGGGAAATATGATGCTGCAGTTGGAGATATTACCATCAGAGCAAATAGATCCTTATATGTTGACTTTACATTACCATATACAGAATCTGGGATATCAATGGTAGTGCCTGTCACAGATAATAATGTTCCTAAAAGCACATGGGTGTTCTTGAAGCCTTTCACTTTGGAACTTTGGGTAACAAGCGGTTGCTTTTTCATATTCGTTGGTTTTGTAGTCTGGGTTCTCGAACATCAGATAAATGATGATTTTCGAGGACCTCCACGTCAACAAATGGGCACAAGCTTGTGGTACTCCTTCTCAACTATGGTTTTTGCACACCGTAAGTTCAATTATGTTAAACTGTTCTGCATTGGTGCTCCATCTTTTGTTCTGTTAACAATGATACACCCTGTCTTAGTGCAGCAGACCACTTCCGGTGATAATACCGGTTTCAGCAACATTTTTATGTTTTTGATATGTTTTGATCAAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

701

Amino Acids

77.75

Weight (kDa)

6.04

Isoelectric Point (pI)

26.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	49 - 352	6.1e-23	Periplasmic binding protein
ANF_receptor	PF01094	68 - 415	1.2e-75	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	488 - 579	4.3e-11	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	494 - 647	7.2e-06	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	598 - 822	1e-31	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1890
Acc36I	ACCTGC	1 cut(s)	1076
AciI	CCGC	3 cut(s)	611, 1083, 1812
AclWI	GGATC	3 cut(s)	1460, 1473, 1671
AcoI	YGGCCR	1 cut(s)	654
AcsI	RAATTY	2 cut(s)	916, 1303
AfaI	GTAC	5 cut(s)	253, 1159, 1321, 1462, 1919
AfeI	AGCGCT	1 cut(s)	1591
AfiI	CCNNNNNNNGG	7 cut(s)	121, 520, 531, 634, 740, 1283, 1400
AgeI	ACCGGT	1 cut(s)	2054
AjiI	CACGTC	1 cut(s)	1892
AjnI	CCWGG	2 cut(s)	114, 519
AjuI	GAANNNNNNNTTGG	2 cut(s)	1245, 1277
AleI	CACNNNNGTG	1 cut(s)	1769
AluBI	AGCT	9 cut(s)	201, 305, 314, 441, 978, 1207, 1373, 1599, 1911
AluI	AGCT	9 cut(s)	201, 305, 314, 441, 978, 1207, 1373, 1599, 1911
Alw21I	GWGCWC	2 cut(s)	622, 1987
Alw26I	GTCTC	1 cut(s)	1353
AlwI	GGATC	3 cut(s)	1460, 1473, 1671
AlwNI	CAGNNNCTG	2 cut(s)	308, 1715
Aor51HI	AGCGCT	1 cut(s)	1591
AoxI	GGCC	5 cut(s)	356, 522, 654, 1129, 1352
ApeKI	GCWGC	9 cut(s)	201, 302, 305, 308, 311, 1010, 1204, 1643, 2029
ApoI	RAATTY	2 cut(s)	916, 1303
ArsI	GACNNNNNNTTYG	4 cut(s)	551, 583, 586, 618
AsiGI	ACCGGT	1 cut(s)	2054
Asp700I	GAANNNNTTC	1 cut(s)	1784
AspLEI	GCGC	1 cut(s)	1592
AspS9I	GGNCC	5 cut(s)	356, 1130, 1340, 1353, 1883
AsuC2I	CCSGG	2 cut(s)	1356, 1424
AsuHPI	GGTGA	2 cut(s)	544, 2057
AsuII	TTCGAA	1 cut(s)	1307
AvaII	GGWCC	2 cut(s)	1340, 1883
BaeGI	GKGCMC	2 cut(s)	549, 1907
BalI	TGGCCA	1 cut(s)	656
BamHI	GGATCC	1 cut(s)	1465
BauI	CACGAG	1 cut(s)	1315
BbsI	GAAGAC	2 cut(s)	706, 1184
Bbv12I	GWGCWC	2 cut(s)	622, 1987
BbvCI	CCTCAGC	1 cut(s)	1369
BbvI	GCAGC	9 cut(s)	188, 292, 295, 314, 323, 997, 1216, 1630, 2041
BccI	CCATC	6 cut(s)	557, 775, 924, 1569, 1670, 1996
BciT130I	CCWGG	2 cut(s)	116, 521
BciVI	GTATCC	1 cut(s)	1490
BclI	TGATCA	1 cut(s)	2092
BcnI	CCSGG	2 cut(s)	1356, 1424
BcoDI	GTCTC	1 cut(s)	1353
BfaI	CTAG	6 cut(s)	255, 317, 1022, 1418, 1442, 1619
BfmI	CTRYAG	4 cut(s)	309, 660, 1208, 1644
BfoI	RGCGCY	1 cut(s)	1593
BfuAI	ACCTGC	1 cut(s)	1076
BfuI	GTATCC	1 cut(s)	1490
BglII	AGATCT	2 cut(s)	907, 1116
BisI	GCNGC	9 cut(s)	202, 303, 306, 309, 312, 1011, 1205, 1644, 2030
BlpI	GCTNAGC	1 cut(s)	197
BlsI	GCNGC	9 cut(s)	203, 304, 307, 310, 313, 1012, 1206, 1645, 2031
BmcAI	AGTACT	1 cut(s)	1321
Bme1390I	CCNGG	4 cut(s)	116, 521, 1356, 1424
Bme18I	GGWCC	2 cut(s)	1340, 1883
BmgBI	CACGTC	1 cut(s)	1892
BmgT120I	GGNCC	5 cut(s)	356, 1130, 1340, 1353, 1883
BmiI	GGNNCC	3 cut(s)	414, 835, 1467
BmrFI	CCNGG	4 cut(s)	116, 521, 1356, 1424
BmrI	ACTGGG	2 cut(s)	643, 1407
BmsI	GCATC	5 cut(s)	35, 213, 633, 997, 1630
BmuI	ACTGGG	2 cut(s)	643, 1407
BpiI	GAAGAC	2 cut(s)	706, 1184
Bpu10I	CCTNAGC	1 cut(s)	1369
Bpu1102I	GCTNAGC	1 cut(s)	197
Bpu14I	TTCGAA	1 cut(s)	1307
BpuEI	CTTGAG	1 cut(s)	477
BpuMI	CCSGG	2 cut(s)	1356, 1424
BsaBI	GATNNNNATC	1 cut(s)	71
BsaJI	CCNNGG	4 cut(s)	21, 114, 837, 1336
BsaWI	WCCGGW	2 cut(s)	2042, 2054
BsaXI	ACNNNNNCTCC	2 cut(s)	1357, 1387
Bsc4I	CCNNNNNNNGG	7 cut(s)	121, 520, 531, 634, 740, 1283, 1400
Bse118I	RCCGGY	2 cut(s)	1200, 2054
Bse1I	ACTGG	4 cut(s)	179, 638, 1102, 1402
Bse3DI	GCAATG	1 cut(s)	1026
Bse8I	GATNNNNATC	1 cut(s)	71
BseBI	CCWGG	2 cut(s)	116, 521
BseDI	CCNNGG	4 cut(s)	21, 114, 837, 1336
BseGI	GGATG	4 cut(s)	516, 624, 790, 1561
BseJI	GATNNNNATC	1 cut(s)	71
BseLI	CCNNNNNNNGG	7 cut(s)	121, 520, 531, 634, 740, 1283, 1400
BseMI	GCAATG	1 cut(s)	1026
BseMII	CTCAG	2 cut(s)	1191, 1383
BseNI	ACTGG	4 cut(s)	179, 638, 1102, 1402
BseRI	GAGGAG	2 cut(s)	83, 271
BseSI	GKGCMC	2 cut(s)	549, 1907
BseXI	GCAGC	9 cut(s)	188, 292, 295, 314, 323, 997, 1216, 1630, 2041
BsgI	GTGCAG	1 cut(s)	2048
BshFI	GGCC	5 cut(s)	358, 524, 656, 1131, 1354
BshTI	ACCGGT	1 cut(s)	2054
BsiHKAI	GWGCWC	2 cut(s)	622, 1987
BsiSI	CCGG	5 cut(s)	1201, 1356, 1424, 2043, 2055
BslFI	GGGAC	2 cut(s)	290, 1406
BslI	CCNNNNNNNGG	7 cut(s)	121, 520, 531, 634, 740, 1283, 1400
BsmAI	GTCTC	1 cut(s)	1353
BsmFI	GGGAC	2 cut(s)	290, 1406
BsnI	GGCC	5 cut(s)	358, 524, 656, 1131, 1354
Bsp119I	TTCGAA	1 cut(s)	1307
Bsp1286I	GDGCHC	4 cut(s)	549, 622, 1907, 1987
Bsp143I	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
Bsp1720I	GCTNAGC	1 cut(s)	197
BspACI	CCGC	3 cut(s)	611, 1083, 1812
BspANI	GGCC	5 cut(s)	358, 524, 656, 1131, 1354
BspCNI	CTCAG	2 cut(s)	1190, 1382
BspLI	GGNNCC	3 cut(s)	414, 835, 1467
BspMAI	CTGCAG	3 cut(s)	313, 664, 1648
BspMI	ACCTGC	1 cut(s)	1076
BspPI	GGATC	3 cut(s)	1460, 1473, 1671
BspT104I	TTCGAA	1 cut(s)	1307
BsrDI	GCAATG	1 cut(s)	1026
BsrFI	RCCGGY	2 cut(s)	1200, 2054
BsrI	ACTGG	4 cut(s)	179, 638, 1102, 1402
BssAI	RCCGGY	2 cut(s)	1200, 2054
BssECI	CCNNGG	4 cut(s)	21, 114, 837, 1336
BssMI	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
BssSI	CACGAG	1 cut(s)	1315
BssT1I	CCWWGG	2 cut(s)	837, 1336
Bst2BI	CACGAG	1 cut(s)	1315
Bst2UI	CCWGG	2 cut(s)	116, 521
Bst4CI	ACNGT	7 cut(s)	332, 556, 833, 1212, 1486, 1949, 1971
BstAPI	GCANNNNNTGC	2 cut(s)	308, 730
BstBI	TTCGAA	1 cut(s)	1307
BstC8I	GCNNGC	5 cut(s)	345, 375, 609, 622, 1333
BstDEI	CTNAG	4 cut(s)	197, 1177, 1369, 2023
BstDSI	CCRYGG	1 cut(s)	21
BstENI	CCTNNNNNAGG	1 cut(s)	518
BstF5I	GGATG	4 cut(s)	516, 624, 790, 1561
BstH2I	RGCGCY	1 cut(s)	1593
BstHHI	GCGC	1 cut(s)	1592
BstKTI	GATC	7 cut(s)	351, 819, 910, 1119, 1468, 1679, 2095
BstMAI	GTCTC	1 cut(s)	1353
BstMBI	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
BstMWI	GCNNNNNNNGC	8 cut(s)	239, 308, 311, 608, 617, 730, 1007, 1596
BstNI	CCWGG	2 cut(s)	116, 521
BstNSI	RCATGY	1 cut(s)	865
BstSCI	CCNGG	4 cut(s)	114, 519, 1354, 1422
BstSFI	CTRYAG	4 cut(s)	309, 660, 1208, 1644
BstSLI	GKGCMC	2 cut(s)	549, 1907
BstV1I	GCAGC	9 cut(s)	188, 292, 295, 314, 323, 997, 1216, 1630, 2041
BstV2I	GAAGAC	2 cut(s)	706, 1184
BstX2I	RGATCY	4 cut(s)	907, 1116, 1465, 1676
BstXI	CCANNNNNNTGG	1 cut(s)	1383
BstYI	RGATCY	4 cut(s)	907, 1116, 1465, 1676
BsuI	GTATCC	1 cut(s)	1490
BsuRI	GGCC	5 cut(s)	358, 524, 656, 1131, 1354
BtgI	CCRYGG	1 cut(s)	21
BtrI	CACGTC	1 cut(s)	1892
BtsCI	GGATG	4 cut(s)	516, 624, 790, 1561
BtsI	GCAGTG	2 cut(s)	549, 657
BtsIMutI	CAGTG	6 cut(s)	337, 536, 549, 657, 1095, 1498
BveI	ACCTGC	1 cut(s)	1076
Cac8I	GCNNGC	5 cut(s)	345, 375, 609, 622, 1333
CaiI	CAGNNNCTG	2 cut(s)	308, 1715
CfoI	GCGC	1 cut(s)	1592
Cfr10I	RCCGGY	2 cut(s)	1200, 2054
Cfr13I	GGNCC	5 cut(s)	356, 1130, 1340, 1353, 1883
Csp6I	GTAC	5 cut(s)	252, 1158, 1320, 1461, 1918
CspAI	ACCGGT	1 cut(s)	2054
CspCI	CAANNNNNGTGG	2 cut(s)	132, 167
CviAII	CATG	6 cut(s)	211, 239, 798, 862, 1072, 1767
CviQI	GTAC	5 cut(s)	252, 1158, 1320, 1461, 1918
DdeI	CTNAG	4 cut(s)	197, 1177, 1369, 2023
DpnI	GATC	7 cut(s)	350, 818, 909, 1118, 1467, 1678, 2094
DpnII	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
DraI	TTTAAA	2 cut(s)	54, 882
DrdI	GACNNNNNNGTC	1 cut(s)	1890
DseDI	GACNNNNNNGTC	1 cut(s)	1890
EaeI	YGGCCR	1 cut(s)	654
Eco130I	CCWWGG	2 cut(s)	837, 1336
Eco147I	AGGCCT	1 cut(s)	524
Eco32I	GATATC	1 cut(s)	1722
Eco47I	GGWCC	2 cut(s)	1340, 1883
Eco47III	AGCGCT	1 cut(s)	1591
EcoNI	CCTNNNNNAGG	1 cut(s)	518
EcoO109I	RGGNCCY	1 cut(s)	1883
EcoRII	CCWGG	2 cut(s)	114, 519
EcoRV	GATATC	1 cut(s)	1722
EcoT14I	CCWWGG	2 cut(s)	837, 1336
ErhI	CCWWGG	2 cut(s)	837, 1336
FaeI	CATG	6 cut(s)	214, 242, 801, 865, 1075, 1770
FaqI	GGGAC	2 cut(s)	290, 1406
FatI	CATG	6 cut(s)	210, 238, 797, 861, 1071, 1766
FauNDI	CATATG	2 cut(s)	506, 726
FbaI	TGATCA	1 cut(s)	2092
Fnu4HI	GCNGC	9 cut(s)	202, 303, 306, 309, 312, 1011, 1205, 1644, 2030
FokI	GGATG	4 cut(s)	503, 611, 797, 1548
Fsp4HI	GCNGC	9 cut(s)	202, 303, 306, 309, 312, 1011, 1205, 1644, 2030
FspBI	CTAG	6 cut(s)	255, 317, 1022, 1418, 1442, 1619
GlaI	GCGC	1 cut(s)	1591
GluI	GCNGC	9 cut(s)	202, 303, 306, 309, 312, 1011, 1205, 1644, 2030
HaeII	RGCGCY	1 cut(s)	1593
HaeIII	GGCC	5 cut(s)	358, 524, 656, 1131, 1354
HapII	CCGG	5 cut(s)	1201, 1356, 1424, 2043, 2055
HhaI	GCGC	1 cut(s)	1592
Hin1II	CATG	6 cut(s)	214, 242, 801, 865, 1075, 1770
Hin6I	GCGC	1 cut(s)	1590
HinP1I	GCGC	1 cut(s)	1590
HincII	GTYRAC	5 cut(s)	559, 1045, 1690, 1895, 2004
HindII	GTYRAC	5 cut(s)	559, 1045, 1690, 1895, 2004
HindIII	AAGCTT	1 cut(s)	1909
HinfI	GANTC	8 cut(s)	278, 362, 842, 993, 1164, 1173, 1390, 1712
HpaI	GTTAAC	2 cut(s)	1045, 2004
HpaII	CCGG	5 cut(s)	1201, 1356, 1424, 2043, 2055
HphI	GGTGA	2 cut(s)	544, 2057
Hpy166II	GTNNAC	6 cut(s)	559, 1045, 1453, 1690, 1895, 2004
Hpy188I	TCNGA	6 cut(s)	223, 453, 470, 594, 1667, 1863
Hpy8I	GTNNAC	6 cut(s)	559, 1045, 1453, 1690, 1895, 2004
HpyAV	CCTTC	6 cut(s)	568, 744, 782, 1066, 1405, 1933
HpyCH4III	ACNGT	7 cut(s)	332, 556, 833, 1212, 1486, 1949, 1971
HpyCH4IV	ACGT	2 cut(s)	83, 1891
HpyF10VI	GCNNNNNNNGC	8 cut(s)	239, 308, 311, 608, 617, 730, 1007, 1596
HpyF3I	CTNAG	4 cut(s)	197, 1177, 1369, 2023
HpySE526I	ACGT	2 cut(s)	83, 1891
Hsp92II	CATG	6 cut(s)	214, 242, 801, 865, 1075, 1770
HspAI	GCGC	1 cut(s)	1590
Ksp22I	TGATCA	1 cut(s)	2092
KspAI	GTTAAC	2 cut(s)	1045, 2004
Kzo9I	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
LmnI	GCTCC	2 cut(s)	1378, 1990
Lsp1109I	GCAGC	9 cut(s)	188, 292, 295, 314, 323, 997, 1216, 1630, 2041
LweI	GCATC	5 cut(s)	35, 213, 633, 997, 1630
MaeI	CTAG	6 cut(s)	255, 317, 1022, 1418, 1442, 1619
MaeII	ACGT	2 cut(s)	83, 1891
MaeIII	GTNAC	6 cut(s)	385, 509, 805, 1017, 1738, 1804
MalI	GATC	7 cut(s)	350, 818, 909, 1118, 1467, 1678, 2094
MboI	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
MboII	GAAGA	4 cut(s)	80, 689, 706, 1184
MflI	RGATCY	4 cut(s)	907, 1116, 1465, 1676
MhlI	GDGCHC	4 cut(s)	549, 622, 1907, 1987
MlsI	TGGCCA	1 cut(s)	656
MluNI	TGGCCA	1 cut(s)	656
MlyI	GAGTC	3 cut(s)	272, 987, 1167
MmeI	TCCRAC	2 cut(s)	1493, 1630
Mox20I	TGGCCA	1 cut(s)	656
MroXI	GAANNNNTTC	1 cut(s)	1784
MscI	TGGCCA	1 cut(s)	656
MseI	TTAA	9 cut(s)	53, 336, 881, 1044, 1233, 1301, 1515, 1965, 2003
MslI	CAYNNNNRTG	3 cut(s)	209, 1769, 2072
Msp20I	TGGCCA	1 cut(s)	656
MspA1I	CMGCKG	1 cut(s)	305
MspI	CCGG	5 cut(s)	1201, 1356, 1424, 2043, 2055
MspR9I	CCNGG	4 cut(s)	116, 521, 1356, 1424
MvaI	CCWGG	2 cut(s)	116, 521
MwoI	GCNNNNNNNGC	8 cut(s)	239, 308, 311, 608, 617, 730, 1007, 1596
NciI	CCSGG	2 cut(s)	1356, 1424
NdeI	CATATG	2 cut(s)	506, 726
NdeII	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
NlaIII	CATG	6 cut(s)	214, 242, 801, 865, 1075, 1770
NlaIV	GGNNCC	3 cut(s)	414, 835, 1467
NmeAIII	GCCGAG	1 cut(s)	727
NmuCI	GTSAC	4 cut(s)	509, 805, 1017, 1738
NspI	RCATGY	1 cut(s)	865
NspV	TTCGAA	1 cut(s)	1307
OliI	CACNNNNGTG	1 cut(s)	1769
PceI	AGGCCT	1 cut(s)	524
PcsI	WCGNNNNNNNCGW	2 cut(s)	965, 1313
PdmI	GAANNNNTTC	1 cut(s)	1784
PfeI	GAWTC	5 cut(s)	362, 842, 1164, 1390, 1712
PinAI	ACCGGT	1 cut(s)	2054
PkrI	GCNGC	9 cut(s)	203, 304, 307, 310, 313, 1012, 1206, 1645, 2031
PleI	GAGTC	3 cut(s)	272, 987, 1167
PpsI	GAGTC	3 cut(s)	272, 987, 1167
PpuMI	RGGWCCY	1 cut(s)	1883
Psp5II	RGGWCCY	1 cut(s)	1883
Psp6I	CCWGG	2 cut(s)	114, 519
PspGI	CCWGG	2 cut(s)	114, 519
PspN4I	GGNNCC	3 cut(s)	414, 835, 1467
PspPI	GGNCC	5 cut(s)	356, 1130, 1340, 1353, 1883
PspPPI	RGGWCCY	1 cut(s)	1883
PsrI	GAACNNNNNNTAC	2 cut(s)	1833, 1865
PstI	CTGCAG	3 cut(s)	313, 664, 1648
PstNI	CAGNNNCTG	2 cut(s)	308, 1715
PsuI	RGATCY	4 cut(s)	907, 1116, 1465, 1676
PvuII	CAGCTG	1 cut(s)	305
RsaI	GTAC	5 cut(s)	253, 1159, 1321, 1462, 1919
RsaNI	GTAC	5 cut(s)	252, 1158, 1320, 1461, 1918
RseI	CAYNNNNRTG	3 cut(s)	209, 1769, 2072
SaqAI	TTAA	9 cut(s)	53, 336, 881, 1044, 1233, 1301, 1515, 1965, 2003
SatI	GCNGC	9 cut(s)	202, 303, 306, 309, 312, 1011, 1205, 1644, 2030
Sau3AI	GATC	7 cut(s)	348, 816, 907, 1116, 1465, 1676, 2092
Sau96I	GGNCC	5 cut(s)	356, 1130, 1340, 1353, 1883
ScaI	AGTACT	1 cut(s)	1321
SchI	GAGTC	3 cut(s)	272, 987, 1167
ScrFI	CCNGG	4 cut(s)	116, 521, 1356, 1424
SduI	GDGCHC	4 cut(s)	549, 622, 1907, 1987
SfaNI	GCATC	5 cut(s)	35, 213, 633, 997, 1630
SfcI	CTRYAG	4 cut(s)	309, 660, 1208, 1644
SfuI	TTCGAA	1 cut(s)	1307
SinI	GGWCC	2 cut(s)	1340, 1883
SmiMI	CAYNNNNRTG	3 cut(s)	209, 1769, 2072
SmlI	CTYRAG	1 cut(s)	492
SmoI	CTYRAG	1 cut(s)	492
SseBI	AGGCCT	1 cut(s)	524
SsiI	CCGC	3 cut(s)	611, 1083, 1812
SspMI	CTAG	6 cut(s)	255, 317, 1022, 1418, 1442, 1619
StuI	AGGCCT	1 cut(s)	524
StyD4I	CCNGG	4 cut(s)	114, 519, 1354, 1422
StyI	CCWWGG	2 cut(s)	837, 1336
TaaI	ACNGT	7 cut(s)	332, 556, 833, 1212, 1486, 1949, 1971
TaiI	ACGT	2 cut(s)	86, 1894
TaqI	TCGA	6 cut(s)	284, 959, 968, 1307, 1854, 1879
TatI	WGTACW	2 cut(s)	1157, 1319
TfiI	GAWTC	5 cut(s)	362, 842, 1164, 1390, 1712
Tru1I	TTAA	9 cut(s)	53, 336, 881, 1044, 1233, 1301, 1515, 1965, 2003
Tru9I	TTAA	9 cut(s)	53, 336, 881, 1044, 1233, 1301, 1515, 1965, 2003
TscAI	CASTG	6 cut(s)	337, 536, 549, 664, 1102, 1498
TseFI	GTSAC	4 cut(s)	509, 805, 1017, 1738
TseI	GCWGC	9 cut(s)	201, 302, 305, 308, 311, 1010, 1204, 1643, 2029
Tsp45I	GTSAC	4 cut(s)	509, 805, 1017, 1738
TspDTI	ATGAA	8 cut(s)	447, 706, 710, 801, 1088, 1156, 1541, 1813
TspGWI	ACGGA	1 cut(s)	1478
TspRI	CASTG	6 cut(s)	337, 536, 549, 664, 1102, 1498
VpaK11BI	GGWCC	2 cut(s)	1340, 1883
XagI	CCTNNNNNAGG	1 cut(s)	518
XapI	RAATTY	2 cut(s)	916, 1303
XbaI	TCTAGA	2 cut(s)	316, 1441
XceI	RCATGY	1 cut(s)	865
XmnI	GAANNNNTTC	1 cut(s)	1784
XspI	CTAG	6 cut(s)	255, 317, 1022, 1418, 1442, 1619
ZrmI	AGTACT	1 cut(s)	1321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.