Rmu_sc0001143.1_g000023

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001143.1
Physical Location & Seq
Forward (+)
88616 .. 91807
3192 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001143.1_g000023.1.cds

Sequence Viewer

Length: 2766 bp
atggcacaaaacaaaaccatcccggtgaatgttggggttgttctagaccttaatacacaggatgggaaaatttggttgagttgcatccaaatggccatctcggacttctatgcttcccatgcttactacaacactaggctggttttgaacatcagggactccaaacaaaatgttgtgcatgcagcaaatgcagctctagatttgataaagaatgcacaagtgcaagccatcctagggccagtgacatcgatgcaagcgagctttattattagtctcgcagaccaagctcatgtacccattatatcattttcagcaacaagcccttctcttgcatcgctcaggagctcctactttttcagaattacacaaaatgactcatcccaagttagagcaataagttccctaattcacacatttggatggagacaagttgtgcccatctacgcagatggtgagtttggcgaaggaatcataccatatttaactgaagctttgcaagaagttaatgctcatatcccctacaagagtgtaataccccagtcagccacagatggtcaaattattgaagagctttacaagttgatgacgatgcaaaccagagtcttcattatccacatgacggcagatcaaggctctaggctctttgcaagagcaacagatattggaatgatgagccaaggatatgtttggatcacaactactgagatgaccaatagattaatggcgatgaactcagtaataagctccatgcatggtgtattaggtgtagaaacatatgtttcgaaaacaaaggagcttcaagaattaacaatgcggtggaaacaacagttccaactgaagaatccgactattcttgacgctgaattggatgtttatggacttttggcttatgatgctgcttttgcattagcaatggcaattgaaaaggttggcaccacaagctttggcttccaaaagcgcttagatgcttccttcagtccatcaacagatcttgaaagttttgaggtctctatatatggtccaaaactttctcatgcattgtctattactaatttcaatggcatagctggggaaatcagttttgttaatggccagcttcaatcatcaactttccagatagttaatgtgaatgatgatggcgcaagggcgattggattttggactccccaaaatggattggcgaacaaattgaattcagaaaacacaaccagttcgaagtccatatttggaccaataatatggccgggagattcattctctattccaaagggatgggagatcccaaccaacattgataagaagttgagaataggcattcctgtaaaggaaggttatactgagtttgtgaagatcactaaggatcctagcactaatgtaacggatgtaactgggttctgtattgacgtttttgaggctgcattggagctattaccatattctctttcttatgagttcattccctttgcaaacattgatggaaccagcgccggaaactacgatgacttgtgctatcaagtatatcttgggaattttgacgctgtggtgggagatacaacaatcagagcaaacagatcattgtatgtagactttaccatgccctacacagaatctggtgtaatgatggctgttccggtcaaagacataaagaatgacaatgcatgggttttcttaaagcctttgacatgggatctttggctgacgatttcttgtttctttgtccttattgcattcgtagtttgggtactcgaacatcgaatcaataaggactttcggggctctccttctcatcaagttagcaccagcgtgtggttctctttctcaactatggtcttttcacatagagagaaagtggttagcaacttaactagatttgtgatgattatatggatattcgttttgctaatacttacacaaagttacacagctagtttagcttcactcttaacggtcgagcgtcttcaaccaactgttaccagcataaatgatcttttgagaaagggggatagtgtggggtatataaatacttcttatatgtacggtctgttgaaacaagtaggtttccctgattcgaagctcaagagttttacaactatggacatcatggatagggatagaattgatggggctctttcaaaagggactgcaaagggtggtattgctgctgttattcatgaggctccctatgtgaagctttttgttgcaaattattgttcgaagtataccatgattggacccgtctttaaagcagatggatttggctttgtgtttccaaaacgttcatcacttgtagcagatttctcccaagcgatcctgaacgtgactgaaggagtgaagatactgaacattgaaagcaaatggttcaaaaaagatgaaagaaattgtcaagactctagtggcccaaaaatttctagcagcagtattcttcggcttgaaagcttttgggtcgtgttcctcattacaggagcggctgcaatactctctctcattgtgtttatagcttcctttctttatcagcataggcacatttggcttcactctgtttcaactgctccaagaccttctacatgggaaagacttcaaactttgctcaaaatcttcaacaaaaaagaccagcaaatgcaaggctctcattctttgcaaagcagtcgacaaccaaatgcatttcatgcttcagcaaacaatgggcagcaaattccagtcagctcttataatttgaaccatatggattcacaatctgtatcttttgagcaacaatcatcaaattag

Protein Analysis

921

Amino Acids

102.63

Weight (kDa)

6.54

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2709
AccB1I GGYRCC 1 cut(s) 932
AccB7I CCANNNNNTGG 1 cut(s) 1806
AccBSI CCGCTC 1 cut(s) 2465
AccI GTMKAC 3 cut(s) 1584, 2219, 2647
AciI CCGC 2 cut(s) 814, 2465
AclI AACGTT 1 cut(s) 2275
AclWI GGATC 6 cut(s) 698, 1273, 1355, 1368, 1695, 2302
AcoI YGGCCR 3 cut(s) 93, 1090, 1241
AcsI RAATTY 5 cut(s) 69, 1192, 1528, 2403, 2691
AcuI CTGAAG 5 cut(s) 507, 857, 958, 2343, 2655
AfaI GTAC 3 cut(s) 294, 1743, 2036
AfeI AGCGCT 1 cut(s) 959
AfiI CCNNNNNNNGG 4 cut(s) 234, 619, 1172, 1806
AleI CACNNNNGTG 1 cut(s) 1802
Alw21I GWGCWC 1 cut(s) 347
Alw26I GTCTC 3 cut(s) 278, 418, 1012
AlwI GGATC 6 cut(s) 698, 1273, 1355, 1368, 1695, 2302
AlwNI CAGNNNCTG 1 cut(s) 1610
Aor51HI AGCGCT 1 cut(s) 959
AoxI GGCC 5 cut(s) 93, 236, 1090, 1241, 2395
ApeKI GCWGC 8 cut(s) 182, 191, 896, 1415, 2159, 2412, 2468, 2686
ApoI RAATTY 5 cut(s) 69, 1192, 1528, 2403, 2691
AseI ATTAAT 1 cut(s) 719
Asp700I GAANNNNTTC 1 cut(s) 2574
AspA2I CCTAGG 1 cut(s) 232
AspLEI GCGC 3 cut(s) 960, 1142, 1487
AspS9I GGNCC 5 cut(s) 236, 1019, 1229, 2231, 2396
AsuC2I CCSGG 2 cut(s) 23, 1245
AsuHPI GGTGA 2 cut(s) 37, 464
AsuII TTCGAA 4 cut(s) 782, 1214, 2069, 2213
AvaII GGWCC 3 cut(s) 1019, 1229, 2231
AvrII CCTAGG 1 cut(s) 232
BaeGI GKGCMC 1 cut(s) 438
BalI TGGCCA 2 cut(s) 95, 1092
BamHI GGATCC 1 cut(s) 1360
BanI GGYRCC 1 cut(s) 932
BanII GRGCYC 3 cut(s) 347, 1778, 2128
BarI GAAGNNNNNNTAC 2 cut(s) 456, 488
BbsI GAAGAC 2 cut(s) 595, 1949
Bbv12I GWGCWC 1 cut(s) 347
BbvI GCAGC 8 cut(s) 194, 203, 883, 1402, 2146, 2424, 2455, 2698
BceAI ACGGC 1 cut(s) 636
BcgI CGANNNNNNTGC 2 cut(s) 2627, 2661
BcnI CCSGG 2 cut(s) 23, 1245
BcoDI GTCTC 3 cut(s) 278, 418, 1012
BfoI RGCGCY 2 cut(s) 961, 1488
BglII AGATCT 1 cut(s) 988
BisI GCNGC 9 cut(s) 183, 192, 897, 1416, 2160, 2413, 2466, 2469, 2687
BlnI CCTAGG 1 cut(s) 232
BlsI GCNGC 9 cut(s) 184, 193, 898, 1417, 2161, 2414, 2467, 2470, 2688
Bme1390I CCNGG 2 cut(s) 23, 1245
Bme18I GGWCC 3 cut(s) 1019, 1229, 2231
BmgT120I GGNCC 5 cut(s) 236, 1019, 1229, 2231, 2396
BmiI GGNNCC 5 cut(s) 934, 1362, 1480, 2178, 2233
BmrFI CCNGG 2 cut(s) 23, 1245
BmrI ACTGGG 2 cut(s) 532, 1398
BmsI GCATC 6 cut(s) 93, 240, 341, 579, 883, 955
BmuI ACTGGG 2 cut(s) 532, 1398
BpiI GAAGAC 2 cut(s) 595, 1949
Bpu10I CCTNAGC 1 cut(s) 338
Bpu14I TTCGAA 4 cut(s) 782, 1214, 2069, 2213
BpuEI CTTGAG 1 cut(s) 2060
BpuMI CCSGG 2 cut(s) 23, 1245
Bsa29I ATCGAT 1 cut(s) 248
BsaI GGTCTC 1 cut(s) 1012
BsaJI CCNNGG 2 cut(s) 232, 676
BsaWI WCCGGW 1 cut(s) 1630
Bsc4I CCNNNNNNNGG 4 cut(s) 234, 619, 1172, 1806
Bse1I ACTGG 5 cut(s) 239, 538, 1209, 1393, 2696
Bse3DI GCAATG 1 cut(s) 918
BseCI ATCGAT 1 cut(s) 248
BseDI CCNNGG 2 cut(s) 232, 676
BseGI GGATG 9 cut(s) 18, 67, 84, 228, 377, 425, 874, 1277, 1387
BseLI CCNNNNNNNGG 4 cut(s) 234, 619, 1172, 1806
BseMI GCAATG 1 cut(s) 918
BseMII CTCAG 4 cut(s) 352, 693, 747, 1329
BseNI ACTGG 5 cut(s) 239, 538, 1209, 1393, 2696
BseSI GKGCMC 1 cut(s) 438
BseXI GCAGC 8 cut(s) 194, 203, 883, 1402, 2146, 2424, 2455, 2698
BseYI CCCAGC 1 cut(s) 1067
Bsh1285I CGRYCG 1 cut(s) 1950
BshFI GGCC 5 cut(s) 95, 238, 1092, 1243, 2397
BshNI GGYRCC 1 cut(s) 932
BshVI ATCGAT 1 cut(s) 248
BsiEI CGRYCG 1 cut(s) 1950
BsiHKAI GWGCWC 1 cut(s) 347
BsiSI CCGG 4 cut(s) 23, 1244, 1488, 1631
BslFI GGGAC 2 cut(s) 170, 2152
BslI CCNNNNNNNGG 4 cut(s) 234, 619, 1172, 1806
BsmAI GTCTC 3 cut(s) 278, 418, 1012
BsmFI GGGAC 2 cut(s) 170, 2152
BsmI GAATGC 3 cut(s) 217, 1314, 1727
BsnI GGCC 5 cut(s) 95, 238, 1092, 1243, 2397
Bso31I GGTCTC 1 cut(s) 1012
Bsp119I TTCGAA 4 cut(s) 782, 1214, 2069, 2213
Bsp1286I GDGCHC 4 cut(s) 347, 438, 1778, 2128
BspACI CCGC 2 cut(s) 814, 2465
BspANI GGCC 5 cut(s) 95, 238, 1092, 1243, 2397
BspCNI CTCAG 4 cut(s) 351, 694, 746, 1330
BspDI ATCGAT 1 cut(s) 248
BspHI TCATGA 1 cut(s) 2170
BspLI GGNNCC 5 cut(s) 934, 1362, 1480, 2178, 2233
BspPI GGATC 6 cut(s) 698, 1273, 1355, 1368, 1695, 2302
BspQI GCTCTTC 1 cut(s) 561
BspT104I TTCGAA 4 cut(s) 782, 1214, 2069, 2213
BspT107I GGYRCC 1 cut(s) 932
BspTNI GGTCTC 1 cut(s) 1012
BsrBI CCGCTC 1 cut(s) 2465
BsrDI GCAATG 1 cut(s) 918
BsrI ACTGG 5 cut(s) 239, 538, 1209, 1393, 2696
BssECI CCNNGG 2 cut(s) 232, 676
BssNAI GTATAC 1 cut(s) 2220
BssT1I CCWWGG 2 cut(s) 232, 676
Bst1107I GTATAC 1 cut(s) 2220
Bst4CI ACNGT 4 cut(s) 828, 1948, 1969, 2039
Bst6I CTCTTC 1 cut(s) 561
BstAPI GCANNNNNTGC 2 cut(s) 188, 2666
BstBI TTCGAA 4 cut(s) 782, 1214, 2069, 2213
BstC8I GCNNGC 5 cut(s) 180, 225, 255, 259, 1094
BstDEI CTNAG 6 cut(s) 338, 702, 733, 961, 1338, 1356
BstF5I GGATG 9 cut(s) 18, 67, 84, 228, 377, 425, 874, 1277, 1387
BstH2I RGCGCY 2 cut(s) 961, 1488
BstHHI GCGC 3 cut(s) 960, 1142, 1487
BstMAI GTCTC 3 cut(s) 278, 418, 1012
BstMCI CGRYCG 1 cut(s) 1950
BstNSI RCATGY 1 cut(s) 182
BstSCI CCNGG 2 cut(s) 21, 1243
BstSLI GKGCMC 1 cut(s) 438
BstV1I GCAGC 8 cut(s) 194, 203, 883, 1402, 2146, 2424, 2455, 2698
BstV2I GAAGAC 2 cut(s) 595, 1949
BstX2I RGATCY 4 cut(s) 988, 1278, 1360, 1687
BstXI CCANNNNNNTGG 2 cut(s) 1239, 1272
BstYI RGATCY 4 cut(s) 988, 1278, 1360, 1687
BstZ17I GTATAC 1 cut(s) 2220
Bsu15I ATCGAT 1 cut(s) 248
BsuRI GGCC 5 cut(s) 95, 238, 1092, 1243, 2397
BsuTUI ATCGAT 1 cut(s) 248
BtgZI GCGATG 2 cut(s) 318, 740
BtsCI GGATG 9 cut(s) 18, 67, 84, 228, 377, 425, 874, 1277, 1387
BtsIMutI CAGTG 1 cut(s) 246
Cac8I GCNNGC 5 cut(s) 180, 225, 255, 259, 1094
CaiI CAGNNNCTG 1 cut(s) 1610
CciI TCATGA 1 cut(s) 2170
CfoI GCGC 3 cut(s) 960, 1142, 1487
Cfr13I GGNCC 5 cut(s) 236, 1019, 1229, 2231, 2396
ClaI ATCGAT 1 cut(s) 248
CseI GACGC 3 cut(s) 866, 1544, 1943
Csp6I GTAC 3 cut(s) 293, 1742, 2035
CspCI CAANNNNNGTGG 2 cut(s) 925, 960
CviQI GTAC 3 cut(s) 293, 1742, 2035
DdeI CTNAG 6 cut(s) 338, 702, 733, 961, 1338, 1356
DraI TTTAAA 1 cut(s) 2242
EaeI YGGCCR 3 cut(s) 93, 1090, 1241
Eam1104I CTCTTC 1 cut(s) 561
EarI CTCTTC 1 cut(s) 561
Ecl136II GAGCTC 1 cut(s) 345
Eco130I CCWWGG 2 cut(s) 232, 676
Eco24I GRGCYC 3 cut(s) 347, 1778, 2128
Eco31I GGTCTC 1 cut(s) 1012
Eco47I GGWCC 3 cut(s) 1019, 1229, 2231
Eco47III AGCGCT 1 cut(s) 959
Eco53kI GAGCTC 1 cut(s) 345
Eco57I CTGAAG 5 cut(s) 507, 857, 958, 2343, 2655
EcoICRI GAGCTC 1 cut(s) 345
EcoRI GAATTC 1 cut(s) 1192
EcoT14I CCWWGG 2 cut(s) 232, 676
EcoT22I ATGCAT 4 cut(s) 753, 1039, 1660, 2662
EcoT38I GRGCYC 3 cut(s) 347, 1778, 2128
ErhI CCWWGG 2 cut(s) 232, 676
FalI AAGNNNNNCTT 2 cut(s) 1506, 1538
FaqI GGGAC 2 cut(s) 170, 2152
FauNDI CATATG 2 cut(s) 775, 2721
FblI GTMKAC 3 cut(s) 1584, 2219, 2647
Fnu4HI GCNGC 9 cut(s) 183, 192, 897, 1416, 2160, 2413, 2466, 2469, 2687
FokI GGATG 9 cut(s) 5, 71, 74, 215, 364, 432, 881, 1284, 1394
FriOI GRGCYC 3 cut(s) 347, 1778, 2128
Fsp4HI GCNGC 9 cut(s) 183, 192, 897, 1416, 2160, 2413, 2466, 2469, 2687
GlaI GCGC 3 cut(s) 959, 1141, 1486
GluI GCNGC 9 cut(s) 183, 192, 897, 1416, 2160, 2413, 2466, 2469, 2687
GsaI CCCAGC 1 cut(s) 1071
HaeII RGCGCY 2 cut(s) 961, 1488
HaeIII GGCC 5 cut(s) 95, 238, 1092, 1243, 2397
HapII CCGG 4 cut(s) 23, 1244, 1488, 1631
HgaI GACGC 3 cut(s) 866, 1544, 1943
HhaI GCGC 3 cut(s) 960, 1142, 1487
Hin6I GCGC 3 cut(s) 958, 1140, 1485
HinP1I GCGC 3 cut(s) 958, 1140, 1485
HincII GTYRAC 1 cut(s) 2648
HindII GTYRAC 1 cut(s) 2648
HindIII AAGCTT 4 cut(s) 489, 940, 2189, 2434
HpaII CCGG 4 cut(s) 23, 1244, 1488, 1631
HphI GGTGA 2 cut(s) 37, 464
Hpy166II GTNNAC 3 cut(s) 1585, 2220, 2648
Hpy188I TCNGA 5 cut(s) 103, 359, 846, 1198, 1562
Hpy8I GTNNAC 3 cut(s) 1585, 2220, 2648
HpyAV CCTTC 7 cut(s) 333, 458, 982, 1322, 1791, 2318, 2568
HpyCH4III ACNGT 4 cut(s) 828, 1948, 1969, 2039
HpyCH4IV ACGT 3 cut(s) 1404, 2275, 2316
HpyF3I CTNAG 6 cut(s) 338, 702, 733, 961, 1338, 1356
HpySE526I ACGT 3 cut(s) 1404, 2275, 2316
HspAI GCGC 3 cut(s) 958, 1140, 1485
LguI GCTCTTC 1 cut(s) 561
LmnI GCTCC 8 cut(s) 342, 350, 749, 793, 1423, 2182, 2462, 2554
Lsp1109I GCAGC 8 cut(s) 194, 203, 883, 1402, 2146, 2424, 2455, 2698
LweI GCATC 6 cut(s) 93, 240, 341, 579, 883, 955
MaeII ACGT 3 cut(s) 1404, 2275, 2316
MaeIII GTNAC 6 cut(s) 241, 1375, 1384, 1916, 1969, 2317
MbiI CCGCTC 1 cut(s) 2465
MboII GAAGA 8 cut(s) 578, 595, 850, 1360, 1949, 2344, 2414, 2587
MfeI CAATTG 1 cut(s) 918
MflI RGATCY 4 cut(s) 988, 1278, 1360, 1687
MhlI GDGCHC 4 cut(s) 347, 438, 1778, 2128
MlsI TGGCCA 2 cut(s) 95, 1092
MluNI TGGCCA 2 cut(s) 95, 1092
MlyI GAGTC 5 cut(s) 152, 368, 609, 1156, 2381
MmeI TCCRAC 2 cut(s) 856, 869
MnlI CCTC 4 cut(s) 997, 1405, 2167, 2462
Mox20I TGGCCA 2 cut(s) 95, 1092
Mph1103I ATGCAT 4 cut(s) 753, 1039, 1660, 2662
MroXI GAANNNNTTC 1 cut(s) 2574
MscI TGGCCA 2 cut(s) 95, 1092
MslI CAYNNNNRTG 4 cut(s) 23, 89, 418, 1802
Msp20I TGGCCA 2 cut(s) 95, 1092
MspI CCGG 4 cut(s) 23, 1244, 1488, 1631
MspR9I CCNGG 2 cut(s) 23, 1245
MunI CAATTG 1 cut(s) 918
Mva1269I GAATGC 3 cut(s) 217, 1314, 1727
NciI CCSGG 2 cut(s) 23, 1245
NdeI CATATG 2 cut(s) 775, 2721
NlaIV GGNNCC 5 cut(s) 934, 1362, 1480, 2178, 2233
NmuCI GTSAC 2 cut(s) 241, 2317
NsiI ATGCAT 4 cut(s) 753, 1039, 1660, 2662
NspI RCATGY 1 cut(s) 182
NspV TTCGAA 4 cut(s) 782, 1214, 2069, 2213
OliI CACNNNNGTG 1 cut(s) 1802
PaeI GCATGC 1 cut(s) 182
PagI TCATGA 1 cut(s) 2170
PciSI GCTCTTC 1 cut(s) 561
PcsI WCGNNNNNNNCGW 1 cut(s) 254
PctI GAATGC 3 cut(s) 217, 1314, 1727
PdmI GAANNNNTTC 1 cut(s) 2574
PfeI GAWTC 7 cut(s) 468, 841, 1250, 1607, 1755, 2066, 2726
PflMI CCANNNNNTGG 1 cut(s) 1806
PkrI GCNGC 9 cut(s) 184, 193, 898, 1417, 2161, 2414, 2467, 2470, 2688
PleI GAGTC 5 cut(s) 152, 368, 608, 1156, 2381
PpsI GAGTC 5 cut(s) 152, 368, 608, 1156, 2381
PshBI ATTAAT 1 cut(s) 719
PsiI TTATAA 1 cut(s) 2709
Psp124BI GAGCTC 1 cut(s) 347
Psp1406I AACGTT 1 cut(s) 2275
PspFI CCCAGC 1 cut(s) 1067
PspN4I GGNNCC 5 cut(s) 934, 1362, 1480, 2178, 2233
PspPI GGNCC 5 cut(s) 236, 1019, 1229, 2231, 2396
PstNI CAGNNNCTG 1 cut(s) 1610
PsuI RGATCY 4 cut(s) 988, 1278, 1360, 1687
RsaI GTAC 3 cut(s) 294, 1743, 2036
RsaNI GTAC 3 cut(s) 293, 1742, 2035
RseI CAYNNNNRTG 4 cut(s) 23, 89, 418, 1802
SacI GAGCTC 1 cut(s) 347
SalI GTCGAC 1 cut(s) 2646
SapI GCTCTTC 1 cut(s) 561
SatI GCNGC 9 cut(s) 183, 192, 897, 1416, 2160, 2413, 2466, 2469, 2687
Sau96I GGNCC 5 cut(s) 236, 1019, 1229, 2231, 2396
SchI GAGTC 5 cut(s) 152, 368, 609, 1156, 2381
ScrFI CCNGG 2 cut(s) 23, 1245
SduI GDGCHC 4 cut(s) 347, 438, 1778, 2128
SfaNI GCATC 6 cut(s) 93, 240, 341, 579, 883, 955
SfuI TTCGAA 4 cut(s) 782, 1214, 2069, 2213
SinI GGWCC 3 cut(s) 1019, 1229, 2231
SmiMI CAYNNNNRTG 4 cut(s) 23, 89, 418, 1802
SmlI CTYRAG 1 cut(s) 2075
SmoI CTYRAG 1 cut(s) 2075
SphI GCATGC 1 cut(s) 182
SsiI CCGC 2 cut(s) 814, 2465
SstI GAGCTC 1 cut(s) 347
StyD4I CCNGG 2 cut(s) 21, 1243
StyI CCWWGG 2 cut(s) 232, 676
TaaI ACNGT 4 cut(s) 828, 1948, 1969, 2039
TaiI ACGT 3 cut(s) 1407, 2278, 2319
TaqI TCGA 9 cut(s) 248, 782, 1214, 1746, 1753, 1950, 2069, 2213, 2647
TauI GCSGC 1 cut(s) 2468
TfiI GAWTC 7 cut(s) 468, 841, 1250, 1607, 1755, 2066, 2726
TscAI CASTG 1 cut(s) 246
TseFI GTSAC 2 cut(s) 241, 2317
TseI GCWGC 8 cut(s) 182, 191, 896, 1415, 2159, 2412, 2468, 2686
Tsp45I GTSAC 2 cut(s) 241, 2317
TspDTI ATGAA 8 cut(s) 595, 743, 1242, 1444, 2159, 2268, 2385, 2654
TspGWI ACGGA 1 cut(s) 1394
TspRI CASTG 1 cut(s) 246
Van91I CCANNNNNTGG 1 cut(s) 1806
VpaK11BI GGWCC 3 cut(s) 1019, 1229, 2231
VspI ATTAAT 1 cut(s) 719
XapI RAATTY 5 cut(s) 69, 1192, 1528, 2403, 2691
XbaI TCTAGA 2 cut(s) 43, 196
XceI RCATGY 1 cut(s) 182
XcmI CCANNNNNNNNNTGG 1 cut(s) 718
XmaJI CCTAGG 1 cut(s) 232
XmiI GTMKAC 3 cut(s) 1584, 2219, 2647
XmnI GAANNNNTTC 1 cut(s) 2574
Zsp2I ATGCAT 4 cut(s) 753, 1039, 1660, 2662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.