Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004748.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

20708 .. 24202

Gene Structure 3495 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004748.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

atggctctcggagacttctatgctactcatgctcactacaacactaggcactgccgagaaagtgttgtcagtgcagctgctgcagctctagatctgataaagaatgaacgagtgaaagccatcatcgggccagtgacttccatgcagacgagctttgtcattaatcttggaaaccaggctcatgtacctattatatcattttctgctgcaagcccttctcttacttctctccggatcccctatttctttcaatttgcacaaactgactcatcccaagtggaagccattagtgcaattgttaaagcttttggatggagacaagtcgtgcccatctacataaacaccgagtatggacagggaatcataccatacctaactgatgccttgcaagaggtagatgctcgtgtcccataccggagtgttatttcctcatcagccaccgacgctgatctatcctctagactatttgtcgaggcaaaagaggttgggatgatgagtgaaggcctgaaggagcttgaagatctcaagatagggttgaaacggcaattccatacagaaaatccagccattggtgctgaattggatgtttttggactttgggcttatgatgctgtttttgcagtggccatggcaattgaacaagcaattggaactccaactggctttcccttccaagggtcaattgttacttccaaccactcgacagatcttgaaggttttcctgcctctccatatggtccagaactttgtagagctctggcaactgctagatttcaaggcatagctgggaatttcagtgttgttggtaggcaacgtgaatcatcaaattttcgtgtagtcaatgttaatggtggtgaggcaacgacaattggattctggacactgaaagagggcctagtcaaaacattgaactcgtcagcaaactcaagtaaaccttcaagttccaaatttaagtttggacctattaggtggccaggaaattctccctctgttcccaagggttgggagttcccaacaaatggcaagaaattgagaattggagttcctgttaagcaagattttaccgagtatgttaaggctgcagtggtactattaccatatgctcttccttatgagttcattccctttgcatactccaatggcaccagcgccggcacttacaatcagttgtgccatcaaccaacagttgatatagacgatctacttaggaatcatgataacgttggctacatcaagaactcttatgtttacgatctcttgaaacaagttggttttgatgattctaagctgaaggaatatgaaacaatggaagaaattgatgaagctctttcaaacttccatctgcgatttacagtggagagacttgttagcaacttggctagattcgttatgattatctgggtgtttgttgtgcttatattgaccataaattacacagccagtttatcatcattgtatgcagttgaacaactccagccaacagttactggcatagaggttctagtaaggcatcaggataatataggctacataaagaattcttttgtttacgatctcctgaaacaagtaggttttgatgattctaagctgaaggattttgaaaccatagaagaaattgatgaagctctttcaaaagggactgtgaatggtggtatcgctgctgttgttcatggaacccccaagatgaagctttttcttgccaaatattgttctaaatataccatgattgaacccatatttaaaactgatggatttgcctttgtgtttccaaaacgttccccacttgtagacgatgtttcacagccaatcctaaacatgaccggaggagacaagataatgacacttgaaaaagaatggttaaagaacgaatccagttgctcagactcgagcggcgcaaatgtttctagcaacagtcttggccttggtagcttttgggtcctattcctcgtcgccgggttggcttcaatactcgccctaatcatatttgtagcttttttcattcataggcatagggacaagttggtgcaaccagctgattcagaaccctcgacatggagaaagatccaagctctcgtcaaaattttcaatgaaaaagaccttgactctcacactttcaggaggagtgggaaagtgctgttaaacttaatgcttagtttactttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

720

Amino Acids

79.63

Weight (kDa)

6.11

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1142
AccB7I	CCANNNNNTGG	3 cut(s)	569, 1002, 1019
AccBSI	CCGCTC	1 cut(s)	1890
AccI	GTMKAC	1 cut(s)	1788
AccIII	TCCGGA	1 cut(s)	231
AciI	CCGC	1 cut(s)	1890
AclI	AACGTT	2 cut(s)	1221, 1774
AclWI	GGATC	3 cut(s)	229, 242, 2056
AcoI	YGGCCR	2 cut(s)	624, 971
AcsI	RAATTY	6 cut(s)	790, 826, 947, 979, 1537, 2079
AcuI	CTGAAG	3 cut(s)	527, 1310, 1610
AfaI	GTAC	2 cut(s)	186, 1089
AfiI	CCNNNNNNNGG	7 cut(s)	126, 569, 674, 675, 1002, 1019, 2052
AhdI	GACNNNNNGTC	1 cut(s)	467
AjnI	CCWGG	2 cut(s)	174, 973
AjuI	GAANNNNNNNTTGG	2 cut(s)	630, 662
Alw21I	GWGCWC	1 cut(s)	757
Alw26I	GTCTC	4 cut(s)	6, 310, 1354, 1821
AlwI	GGATC	3 cut(s)	229, 242, 2056
AlwNI	CAGNNNCTG	2 cut(s)	80, 1487
Ama87I	CYCGRG	1 cut(s)	1885
Aor13HI	TCCGGA	1 cut(s)	231
AoxI	GGCC	6 cut(s)	128, 502, 624, 892, 971, 1918
ApeKI	GCWGC	7 cut(s)	74, 77, 80, 83, 206, 1079, 1658
ApoI	RAATTY	6 cut(s)	790, 826, 947, 979, 1537, 2079
AseI	ATTAAT	1 cut(s)	162
Asp700I	GAANNNNTTC	1 cut(s)	717
AspLEI	GCGC	2 cut(s)	1151, 1895
AspS9I	GGNCC	5 cut(s)	128, 737, 892, 959, 1936
AsuC2I	CCSGG	1 cut(s)	1954
AsuHPI	GGTGA	1 cut(s)	866
AvaI	CYCGRG	1 cut(s)	1885
AvaII	GGWCC	3 cut(s)	737, 959, 1936
BaeGI	GKGCMC	1 cut(s)	330
BalI	TGGCCA	2 cut(s)	626, 973
BamHI	GGATCC	1 cut(s)	234
BanI	GGYRCC	1 cut(s)	1142
BanII	GRGCYC	1 cut(s)	757
BauI	CACGAG	1 cut(s)	402
Bbv12I	GWGCWC	1 cut(s)	757
BbvI	GCAGC	7 cut(s)	64, 67, 86, 95, 193, 1066, 1645
BccI	CCATC	6 cut(s)	128, 306, 338, 1182, 1347, 1742
BceAI	ACGGC	1 cut(s)	557
BciT130I	CCWGG	2 cut(s)	176, 975
BcnI	CCSGG	1 cut(s)	1954
BcoDI	GTCTC	4 cut(s)	6, 310, 1354, 1821
BfaI	CTAG	8 cut(s)	45, 89, 459, 768, 896, 1380, 1502, 1905
BfmI	CTRYAG	2 cut(s)	81, 1080
BfoI	RGCGCY	1 cut(s)	1152
BglI	GCCNNNNNGGC	1 cut(s)	1958
BglII	AGATCT	3 cut(s)	91, 520, 706
BisI	GCNGC	8 cut(s)	75, 78, 81, 84, 207, 1080, 1659, 1891
BlsI	GCNGC	8 cut(s)	76, 79, 82, 85, 208, 1081, 1660, 1892
Bme1390I	CCNGG	3 cut(s)	176, 975, 1954
Bme18I	GGWCC	3 cut(s)	737, 959, 1936
BmeRI	GACNNNNNGTC	1 cut(s)	467
BmeT110I	CYCGRG	1 cut(s)	1885
BmgT120I	GGNCC	5 cut(s)	128, 737, 892, 959, 1936
BmiI	GGNNCC	4 cut(s)	236, 1144, 1675, 1937
BmrFI	CCNGG	3 cut(s)	176, 975, 1954
BmsI	GCATC	4 cut(s)	370, 388, 598, 1519
BpmI	CTGGAG	1 cut(s)	1457
BpuEI	CTTGAG	2 cut(s)	509, 910
BpuMI	CCSGG	1 cut(s)	1954
BsaJI	CCNNGG	4 cut(s)	627, 673, 996, 1921
BsaWI	WCCGGW	3 cut(s)	231, 414, 1820
BsaXI	ACNNNNNCTCC	2 cut(s)	1032, 1062
Bsc4I	CCNNNNNNNGG	7 cut(s)	126, 569, 674, 675, 1002, 1019, 2052
Bse118I	RCCGGY	1 cut(s)	1151
Bse1I	ACTGG	5 cut(s)	131, 664, 1440, 1492, 1872
BseAI	TCCGGA	1 cut(s)	231
BseBI	CCWGG	2 cut(s)	176, 975
BseDI	CCNNGG	4 cut(s)	627, 673, 996, 1921
BseGI	GGATG	4 cut(s)	269, 317, 495, 589
BseLI	CCNNNNNNNGG	7 cut(s)	126, 569, 674, 675, 1002, 1019, 2052
BseMII	CTCAG	1 cut(s)	1893
BseNI	ACTGG	5 cut(s)	131, 664, 1440, 1492, 1872
BseRI	GAGGAG	2 cut(s)	1839, 2134
BseSI	GKGCMC	1 cut(s)	330
BseXI	GCAGC	7 cut(s)	64, 67, 86, 95, 193, 1066, 1645
BseYI	CCCAGC	1 cut(s)	785
BsgI	GTGCAG	1 cut(s)	93
BshFI	GGCC	6 cut(s)	130, 504, 626, 894, 973, 1920
BshNI	GGYRCC	1 cut(s)	1142
BsiHKAI	GWGCWC	1 cut(s)	757
BsiHKCI	CYCGRG	1 cut(s)	1885
BsiSI	CCGG	5 cut(s)	232, 415, 1152, 1821, 1953
BslFI	GGGAC	3 cut(s)	392, 1651, 2027
BslI	CCNNNNNNNGG	7 cut(s)	126, 569, 674, 675, 1002, 1019, 2052
BsmAI	GTCTC	4 cut(s)	6, 310, 1354, 1821
BsmFI	GGGAC	3 cut(s)	392, 1651, 2027
BsnI	GGCC	6 cut(s)	130, 504, 626, 894, 973, 1920
BsoBI	CYCGRG	1 cut(s)	1885
Bsp1286I	GDGCHC	2 cut(s)	330, 757
Bsp13I	TCCGGA	1 cut(s)	231
Bsp143I	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
Bsp19I	CCATGG	1 cut(s)	627
BspACI	CCGC	1 cut(s)	1890
BspANI	GGCC	6 cut(s)	130, 504, 626, 894, 973, 1920
BspCNI	CTCAG	1 cut(s)	1892
BspEI	TCCGGA	1 cut(s)	231
BspHI	TCATGA	1 cut(s)	1213
BspLI	GGNNCC	4 cut(s)	236, 1144, 1675, 1937
BspMAI	CTGCAG	2 cut(s)	85, 1084
BspPI	GGATC	3 cut(s)	229, 242, 2056
BspQI	GCTCTTC	1 cut(s)	1110
BspT107I	GGYRCC	1 cut(s)	1142
BsrBI	CCGCTC	1 cut(s)	1890
BsrFI	RCCGGY	1 cut(s)	1151
BsrI	ACTGG	5 cut(s)	131, 664, 1440, 1492, 1872
BssAI	RCCGGY	1 cut(s)	1151
BssECI	CCNNGG	4 cut(s)	627, 673, 996, 1921
BssMI	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
BssSI	CACGAG	1 cut(s)	402
BssT1I	CCWWGG	4 cut(s)	627, 673, 996, 1921
Bst2BI	CACGAG	1 cut(s)	402
Bst2UI	CCWGG	2 cut(s)	176, 975
Bst4CI	ACNGT	5 cut(s)	1186, 1354, 1483, 1642, 1913
Bst6I	CTCTTC	1 cut(s)	1110
BstAPI	GCANNNNNTGC	1 cut(s)	80
BstC8I	GCNNGC	2 cut(s)	211, 1153
BstDEI	CTNAG	5 cut(s)	1205, 1284, 1584, 1879, 2150
BstDSI	CCRYGG	1 cut(s)	627
BstF5I	GGATG	4 cut(s)	269, 317, 495, 589
BstH2I	RGCGCY	1 cut(s)	1152
BstHHI	GCGC	2 cut(s)	1151, 1895
BstKTI	GATC	9 cut(s)	94, 237, 451, 523, 709, 1201, 1255, 1555, 2064
BstMAI	GTCTC	4 cut(s)	6, 310, 1354, 1821
BstMBI	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
BstNI	CCWGG	2 cut(s)	176, 975
BstSCI	CCNGG	3 cut(s)	174, 973, 1952
BstSFI	CTRYAG	2 cut(s)	81, 1080
BstSLI	GKGCMC	1 cut(s)	330
BstV1I	GCAGC	7 cut(s)	64, 67, 86, 95, 193, 1066, 1645
BstX2I	RGATCY	5 cut(s)	91, 234, 520, 706, 2061
BstYI	RGATCY	5 cut(s)	91, 234, 520, 706, 2061
BsuRI	GGCC	6 cut(s)	130, 504, 626, 894, 973, 1920
BtgI	CCRYGG	1 cut(s)	627
BtsCI	GGATG	4 cut(s)	269, 317, 495, 589
BtsI	GCAGTG	3 cut(s)	49, 627, 1089
BtsIMutI	CAGTG	8 cut(s)	49, 76, 138, 627, 802, 881, 1089, 1359
Cac8I	GCNNGC	2 cut(s)	211, 1153
CaiI	CAGNNNCTG	2 cut(s)	80, 1487
CciI	TCATGA	1 cut(s)	1213
CfoI	GCGC	2 cut(s)	1151, 1895
Cfr10I	RCCGGY	1 cut(s)	1151
Cfr13I	GGNCC	5 cut(s)	128, 737, 892, 959, 1936
CseI	GACGC	1 cut(s)	452
Csp6I	GTAC	2 cut(s)	185, 1088
CviAII	CATG	9 cut(s)	29, 142, 182, 628, 1214, 1670, 1723, 1816, 2052
CviQI	GTAC	2 cut(s)	185, 1088
DdeI	CTNAG	5 cut(s)	1205, 1284, 1584, 1879, 2150
DpnI	GATC	9 cut(s)	93, 236, 450, 522, 708, 1200, 1254, 1554, 2063
DpnII	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
DraI	TTTAAA	1 cut(s)	1741
DriI	GACNNNNNGTC	1 cut(s)	467
EaeI	YGGCCR	2 cut(s)	624, 971
Eam1104I	CTCTTC	1 cut(s)	1110
Eam1105I	GACNNNNNGTC	1 cut(s)	467
EarI	CTCTTC	1 cut(s)	1110
Ecl136II	GAGCTC	1 cut(s)	755
Eco130I	CCWWGG	4 cut(s)	627, 673, 996, 1921
Eco147I	AGGCCT	1 cut(s)	504
Eco24I	GRGCYC	1 cut(s)	757
Eco47I	GGWCC	3 cut(s)	737, 959, 1936
Eco53kI	GAGCTC	1 cut(s)	755
Eco57I	CTGAAG	3 cut(s)	527, 1310, 1610
Eco88I	CYCGRG	1 cut(s)	1885
EcoICRI	GAGCTC	1 cut(s)	755
EcoO109I	RGGNCCY	2 cut(s)	892, 1936
EcoRI	GAATTC	1 cut(s)	1537
EcoRII	CCWGG	2 cut(s)	174, 973
EcoT14I	CCWWGG	4 cut(s)	627, 673, 996, 1921
EcoT38I	GRGCYC	1 cut(s)	757
ErhI	CCWWGG	4 cut(s)	627, 673, 996, 1921
FaeI	CATG	9 cut(s)	32, 145, 185, 631, 1217, 1673, 1726, 1819, 2055
FalI	AAGNNNNNCTT	2 cut(s)	919, 951
FaqI	GGGAC	3 cut(s)	392, 1651, 2027
FatI	CATG	9 cut(s)	28, 141, 181, 627, 1213, 1669, 1722, 1815, 2051
FauNDI	CATATG	2 cut(s)	733, 1099
FblI	GTMKAC	1 cut(s)	1788
Fnu4HI	GCNGC	8 cut(s)	75, 78, 81, 84, 207, 1080, 1659, 1891
FokI	GGATG	4 cut(s)	256, 324, 502, 596
FriOI	GRGCYC	1 cut(s)	757
Fsp4HI	GCNGC	8 cut(s)	75, 78, 81, 84, 207, 1080, 1659, 1891
FspBI	CTAG	8 cut(s)	45, 89, 459, 768, 896, 1380, 1502, 1905
GlaI	GCGC	2 cut(s)	1150, 1894
GluI	GCNGC	8 cut(s)	75, 78, 81, 84, 207, 1080, 1659, 1891
GsaI	CCCAGC	1 cut(s)	789
GsuI	CTGGAG	1 cut(s)	1457
HaeII	RGCGCY	1 cut(s)	1152
HaeIII	GGCC	6 cut(s)	130, 504, 626, 894, 973, 1920
HapII	CCGG	5 cut(s)	232, 415, 1152, 1821, 1953
HgaI	GACGC	1 cut(s)	452
HhaI	GCGC	2 cut(s)	1151, 1895
Hin1II	CATG	9 cut(s)	32, 145, 185, 631, 1217, 1673, 1726, 1819, 2055
Hin6I	GCGC	2 cut(s)	1149, 1893
HinP1I	GCGC	2 cut(s)	1149, 1893
HindIII	AAGCTT	2 cut(s)	303, 1688
HpaII	CCGG	5 cut(s)	232, 415, 1152, 1821, 1953
HphI	GGTGA	1 cut(s)	866
Hpy166II	GTNNAC	5 cut(s)	932, 1249, 1549, 1789, 2156
Hpy188I	TCNGA	4 cut(s)	11, 96, 1882, 2041
Hpy8I	GTNNAC	5 cut(s)	932, 1249, 1549, 1789, 2156
Hpy99I	CGWCG	2 cut(s)	446, 1952
HpyAV	CCTTC	8 cut(s)	225, 494, 502, 679, 707, 945, 1285, 1585
HpyCH4III	ACNGT	5 cut(s)	1186, 1354, 1483, 1642, 1913
HpyCH4IV	ACGT	3 cut(s)	814, 1221, 1774
HpyF3I	CTNAG	5 cut(s)	1205, 1284, 1584, 1879, 2150
HpySE526I	ACGT	3 cut(s)	814, 1221, 1774
Hsp92II	CATG	9 cut(s)	32, 145, 185, 631, 1217, 1673, 1726, 1819, 2055
HspAI	GCGC	2 cut(s)	1149, 1893
Kpn2I	TCCGGA	1 cut(s)	231
KroI	GCCGGC	1 cut(s)	1151
KroNI	GCCGGC	1 cut(s)	1153
Kzo9I	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
LguI	GCTCTTC	1 cut(s)	1110
LmnI	GCTCC	1 cut(s)	511
Lsp1109I	GCAGC	7 cut(s)	64, 67, 86, 95, 193, 1066, 1645
LweI	GCATC	4 cut(s)	370, 388, 598, 1519
MaeI	CTAG	8 cut(s)	45, 89, 459, 768, 896, 1380, 1502, 1905
MaeII	ACGT	3 cut(s)	814, 1221, 1774
MaeIII	GTNAC	3 cut(s)	133, 685, 1483
MalI	GATC	9 cut(s)	93, 236, 450, 522, 708, 1200, 1254, 1554, 2063
MbiI	CCGCTC	1 cut(s)	1890
MboI	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
MboII	GAAGA	4 cut(s)	530, 1097, 1322, 1622
MfeI	CAATTG	5 cut(s)	294, 633, 645, 681, 867
MflI	RGATCY	5 cut(s)	91, 234, 520, 706, 2061
MhlI	GDGCHC	2 cut(s)	330, 757
MlsI	TGGCCA	2 cut(s)	626, 973
MluNI	TGGCCA	2 cut(s)	626, 973
MlyI	GAGTC	3 cut(s)	260, 1877, 2096
MmeI	TCCRAC	2 cut(s)	680, 717
Mox20I	TGGCCA	2 cut(s)	626, 973
MroI	TCCGGA	1 cut(s)	231
MroNI	GCCGGC	1 cut(s)	1151
MroXI	GAANNNNTTC	1 cut(s)	717
MscI	TGGCCA	2 cut(s)	626, 973
Msp20I	TGGCCA	2 cut(s)	626, 973
MspA1I	CMGCKG	2 cut(s)	77, 2033
MspI	CCGG	5 cut(s)	232, 415, 1152, 1821, 1953
MspR9I	CCNGG	3 cut(s)	176, 975, 1954
MunI	CAATTG	5 cut(s)	294, 633, 645, 681, 867
MvaI	CCWGG	2 cut(s)	176, 975
NaeI	GCCGGC	1 cut(s)	1153
NciI	CCSGG	1 cut(s)	1954
NcoI	CCATGG	1 cut(s)	627
NdeI	CATATG	2 cut(s)	733, 1099
NdeII	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
NgoMIV	GCCGGC	1 cut(s)	1151
NlaIII	CATG	9 cut(s)	32, 145, 185, 631, 1217, 1673, 1726, 1819, 2055
NlaIV	GGNNCC	4 cut(s)	236, 1144, 1675, 1937
NmeAIII	GCCGAG	1 cut(s)	80
NmuCI	GTSAC	1 cut(s)	133
PaeR7I	CTCGAG	1 cut(s)	1885
PagI	TCATGA	1 cut(s)	1213
PceI	AGGCCT	1 cut(s)	504
PciSI	GCTCTTC	1 cut(s)	1110
PdiI	GCCGGC	1 cut(s)	1153
PdmI	GAANNNNTTC	1 cut(s)	717
PfeI	GAWTC	9 cut(s)	360, 818, 873, 1210, 1280, 1383, 1580, 1868, 2036
PflMI	CCANNNNNTGG	3 cut(s)	569, 1002, 1019
PkrI	GCNGC	8 cut(s)	76, 79, 82, 85, 208, 1081, 1660, 1892
PleI	GAGTC	3 cut(s)	260, 1877, 2096
PpsI	GAGTC	3 cut(s)	260, 1877, 2096
PpuMI	RGGWCCY	1 cut(s)	1936
PshBI	ATTAAT	1 cut(s)	162
Psp124BI	GAGCTC	1 cut(s)	757
Psp1406I	AACGTT	2 cut(s)	1221, 1774
Psp5II	RGGWCCY	1 cut(s)	1936
Psp6I	CCWGG	2 cut(s)	174, 973
PspFI	CCCAGC	1 cut(s)	785
PspGI	CCWGG	2 cut(s)	174, 973
PspN4I	GGNNCC	4 cut(s)	236, 1144, 1675, 1937
PspPI	GGNCC	5 cut(s)	128, 737, 892, 959, 1936
PspPPI	RGGWCCY	1 cut(s)	1936
PspXI	VCTCGAGB	1 cut(s)	1885
PstI	CTGCAG	2 cut(s)	85, 1084
PstNI	CAGNNNCTG	2 cut(s)	80, 1487
PsuI	RGATCY	5 cut(s)	91, 234, 520, 706, 2061
PvuII	CAGCTG	2 cut(s)	77, 2033
RsaI	GTAC	2 cut(s)	186, 1089
RsaNI	GTAC	2 cut(s)	185, 1088
SacI	GAGCTC	1 cut(s)	757
SapI	GCTCTTC	1 cut(s)	1110
SatI	GCNGC	8 cut(s)	75, 78, 81, 84, 207, 1080, 1659, 1891
Sau3AI	GATC	9 cut(s)	91, 234, 448, 520, 706, 1198, 1252, 1552, 2061
Sau96I	GGNCC	5 cut(s)	128, 737, 892, 959, 1936
SchI	GAGTC	3 cut(s)	260, 1877, 2096
ScrFI	CCNGG	3 cut(s)	176, 975, 1954
SduI	GDGCHC	2 cut(s)	330, 757
SfaNI	GCATC	4 cut(s)	370, 388, 598, 1519
SfcI	CTRYAG	2 cut(s)	81, 1080
Sfr274I	CTCGAG	1 cut(s)	1885
SinI	GGWCC	3 cut(s)	737, 959, 1936
SlaI	CTCGAG	1 cut(s)	1885
SmlI	CTYRAG	3 cut(s)	524, 925, 1885
SmoI	CTYRAG	3 cut(s)	524, 925, 1885
SseBI	AGGCCT	1 cut(s)	504
SsiI	CCGC	1 cut(s)	1890
SspI	AATATT	1 cut(s)	1706
SspMI	CTAG	8 cut(s)	45, 89, 459, 768, 896, 1380, 1502, 1905
SstI	GAGCTC	1 cut(s)	757
StuI	AGGCCT	1 cut(s)	504
StyD4I	CCNGG	3 cut(s)	174, 973, 1952
StyI	CCWWGG	4 cut(s)	627, 673, 996, 1921
TaaI	ACNGT	5 cut(s)	1186, 1354, 1483, 1642, 1913
TaiI	ACGT	3 cut(s)	817, 1224, 1777
TaqI	TCGA	4 cut(s)	471, 701, 1886, 2048
TauI	GCSGC	1 cut(s)	1893
TfiI	GAWTC	9 cut(s)	360, 818, 873, 1210, 1280, 1383, 1580, 1868, 2036
TscAI	CASTG	8 cut(s)	56, 76, 138, 627, 802, 888, 1089, 1359
TseFI	GTSAC	1 cut(s)	133
TseI	GCWGC	7 cut(s)	74, 77, 80, 83, 206, 1079, 1658
Tsp45I	GTSAC	1 cut(s)	133
TspRI	CASTG	8 cut(s)	56, 76, 138, 627, 802, 888, 1089, 1359
Van91I	CCANNNNNTGG	3 cut(s)	569, 1002, 1019
VpaK11BI	GGWCC	3 cut(s)	737, 959, 1936
VspI	ATTAAT	1 cut(s)	162
XapI	RAATTY	6 cut(s)	790, 826, 947, 979, 1537, 2079
XbaI	TCTAGA	2 cut(s)	88, 458
XhoI	CTCGAG	1 cut(s)	1885
XmiI	GTMKAC	1 cut(s)	1788
XmnI	GAANNNNTTC	1 cut(s)	717
XspI	CTAG	8 cut(s)	45, 89, 459, 768, 896, 1380, 1502, 1905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.