Glutamate receptor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Peripla_BP_6 | PF13458 | 33 - 337 | 5.7e-21 | Periplasmic binding protein |
| ANF_receptor | PF01094 | 53 - 403 | 3e-75 | Receptor family ligand binding region |
| Lig_chan-Glu_bd | PF10613 | 482 - 570 | 3.1e-06 | Ligated ion channel L-glutamate- and glycine-binding site |
| SBP_bac_3 | PF00497 | 484 - 810 | 8.5e-08 | Bacterial extracellular solute-binding proteins, family 3 |
| Lig_chan | PF00060 | 589 - 842 | 1.2e-39 | Ligand-gated ion channel |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 2603 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1323, 1356 |
| AccI | GTMKAC | 5 cut(s) | 120, 522, 1599, 2285, 2686 |
| AciI | CCGC | 2 cut(s) | 264, 971 |
| AclWI | GGATC | 7 cut(s) | 282, 773, 1030, 1357, 2176, 2432, 2630 |
| AcoI | YGGCCR | 2 cut(s) | 1325, 2753 |
| AcsI | RAATTY | 6 cut(s) | 817, 878, 1264, 1421, 1441, 2380 |
| AcuI | CTGAAG | 1 cut(s) | 398 |
| AfaI | GTAC | 7 cut(s) | 149, 606, 1378, 1661, 1710, 2567, 2710 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1250, 1323, 1356, 1373, 2600, 2613, 2842 |
| AjnI | CCWGG | 1 cut(s) | 227 |
| Alw21I | GWGCWC | 2 cut(s) | 8, 422 |
| Alw26I | GTCTC | 1 cut(s) | 1084 |
| AlwI | GGATC | 7 cut(s) | 282, 773, 1030, 1357, 2176, 2432, 2630 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1691, 2798 |
| Ama87I | CYCGRG | 2 cut(s) | 151, 572 |
| AoxI | GGCC | 4 cut(s) | 1325, 1768, 2482, 2753 |
| ApeKI | GCWGC | 9 cut(s) | 74, 77, 257, 260, 266, 1496, 1560, 1753, 2225 |
| ApoI | RAATTY | 6 cut(s) | 817, 878, 1264, 1421, 1441, 2380 |
| AseI | ATTAAT | 1 cut(s) | 1839 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 810, 1039, 1536, 1848 |
| AspA2I | CCTAGG | 1 cut(s) | 307 |
| AspLEI | GCGC | 1 cut(s) | 172 |
| AspS9I | GGNCC | 7 cut(s) | 131, 311, 1313, 1504, 1768, 1856, 2297 |
| AsuC2I | CCSGG | 3 cut(s) | 1329, 1367, 1471 |
| AsuHPI | GGTGA | 2 cut(s) | 1459, 2730 |
| AvaI | CYCGRG | 2 cut(s) | 151, 572 |
| AvaII | GGWCC | 6 cut(s) | 131, 311, 1313, 1504, 1856, 2297 |
| AvrII | CCTAGG | 1 cut(s) | 307 |
| BalI | TGGCCA | 1 cut(s) | 2755 |
| BanI | GGYRCC | 1 cut(s) | 2603 |
| BanII | GRGCYC | 2 cut(s) | 8, 422 |
| BauI | CACGAG | 2 cut(s) | 1120, 2808 |
| BbsI | GAAGAC | 1 cut(s) | 670 |
| Bbv12I | GWGCWC | 2 cut(s) | 8, 422 |
| BbvI | GCAGC | 9 cut(s) | 64, 86, 247, 269, 278, 1483, 1572, 1765, 2212 |
| BccI | CCATC | 7 cut(s) | 122, 489, 1350, 1403, 2309, 2387, 2395 |
| BceAI | ACGGC | 1 cut(s) | 1573 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 563, 597 |
| BciT130I | CCWGG | 1 cut(s) | 229 |
| BciVI | GTATCC | 2 cut(s) | 41, 2812 |
| BclI | TGATCA | 2 cut(s) | 628, 1959 |
| BcnI | CCSGG | 3 cut(s) | 1329, 1367, 1471 |
| BcoDI | GTCTC | 1 cut(s) | 1084 |
| BfaI | CTAG | 5 cut(s) | 210, 308, 672, 2012, 2469 |
| BfmI | CTRYAG | 1 cut(s) | 1497 |
| BfoI | RGCGCY | 1 cut(s) | 173 |
| BfuI | GTATCC | 2 cut(s) | 41, 2812 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 71 |
| BglII | AGATCT | 1 cut(s) | 2640 |
| BlnI | CCTAGG | 1 cut(s) | 307 |
| Bme1390I | CCNGG | 4 cut(s) | 229, 1329, 1367, 1471 |
| Bme18I | GGWCC | 6 cut(s) | 131, 311, 1313, 1504, 1856, 2297 |
| BmeT110I | CYCGRG | 2 cut(s) | 151, 572 |
| BmgT120I | GGNCC | 7 cut(s) | 131, 311, 1313, 1504, 1768, 1856, 2297 |
| BmiI | GGNNCC | 3 cut(s) | 1315, 1769, 2605 |
| BmrFI | CCNGG | 4 cut(s) | 229, 1329, 1367, 1471 |
| BmrI | ACTGGG | 2 cut(s) | 92, 2466 |
| BmuI | ACTGGG | 2 cut(s) | 92, 2466 |
| BoxI | GACNNNNGTC | 1 cut(s) | 674 |
| BpiI | GAAGAC | 1 cut(s) | 670 |
| BpmI | CTGGAG | 1 cut(s) | 2808 |
| BpuEI | CTTGAG | 3 cut(s) | 348, 2141, 2507 |
| BpuMI | CCSGG | 3 cut(s) | 1329, 1367, 1471 |
| BsaAI | YACGTR | 3 cut(s) | 520, 1575, 1663 |
| BsaI | GGTCTC | 1 cut(s) | 1084 |
| BsaJI | CCNNGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| BsaWI | WCCGGW | 1 cut(s) | 1243 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 102, 132, 1386, 1416, 2073, 2103 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1250, 1323, 1356, 1373, 2600, 2613, 2842 |
| Bse1I | ACTGG | 6 cut(s) | 98, 1400, 1458, 2461, 2710, 2756 |
| Bse3DI | GCAATG | 2 cut(s) | 807, 1680 |
| BseBI | CCWGG | 1 cut(s) | 229 |
| BseDI | CCNNGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| BseGI | GGATG | 6 cut(s) | 500, 949, 1361, 1414, 1782, 2110 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1250, 1323, 1356, 1373, 2600, 2613, 2842 |
| BseMI | GCAATG | 2 cut(s) | 807, 1680 |
| BseNI | ACTGG | 6 cut(s) | 98, 1400, 1458, 2461, 2710, 2756 |
| BseRI | GAGGAG | 1 cut(s) | 37 |
| BseXI | GCAGC | 9 cut(s) | 64, 86, 247, 269, 278, 1483, 1572, 1765, 2212 |
| BshFI | GGCC | 4 cut(s) | 1327, 1770, 2484, 2755 |
| BshNI | GGYRCC | 1 cut(s) | 2603 |
| BsiHKAI | GWGCWC | 2 cut(s) | 8, 422 |
| BsiHKCI | CYCGRG | 2 cut(s) | 151, 572 |
| BsiSI | CCGG | 4 cut(s) | 1244, 1328, 1367, 1470 |
| BslFI | GGGAC | 1 cut(s) | 575 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1250, 1323, 1356, 1373, 2600, 2613, 2842 |
| BsmAI | GTCTC | 1 cut(s) | 1084 |
| BsmFI | GGGAC | 1 cut(s) | 575 |
| BsmI | GAATGC | 1 cut(s) | 1015 |
| BsnI | GGCC | 4 cut(s) | 1327, 1770, 2484, 2755 |
| Bso31I | GGTCTC | 1 cut(s) | 1084 |
| BsoBI | CYCGRG | 2 cut(s) | 151, 572 |
| Bsp1286I | GDGCHC | 2 cut(s) | 8, 422 |
| Bsp19I | CCATGG | 3 cut(s) | 69, 987, 1905 |
| BspACI | CCGC | 2 cut(s) | 264, 971 |
| BspANI | GGCC | 4 cut(s) | 1327, 1770, 2484, 2755 |
| BspHI | TCATGA | 2 cut(s) | 2236, 2719 |
| BspLI | GGNNCC | 3 cut(s) | 1315, 1769, 2605 |
| BspMAI | CTGCAG | 1 cut(s) | 1501 |
| BspPI | GGATC | 7 cut(s) | 282, 773, 1030, 1357, 2176, 2432, 2630 |
| BspQI | GCTCTTC | 1 cut(s) | 1216 |
| BspT107I | GGYRCC | 1 cut(s) | 2603 |
| BspTNI | GGTCTC | 1 cut(s) | 1084 |
| BsrDI | GCAATG | 2 cut(s) | 807, 1680 |
| BsrI | ACTGG | 6 cut(s) | 98, 1400, 1458, 2461, 2710, 2756 |
| BssECI | CCNNGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| BssNAI | GTATAC | 2 cut(s) | 1600, 2286 |
| BssSI | CACGAG | 2 cut(s) | 1120, 2808 |
| BssT1I | CCWWGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| Bst1107I | GTATAC | 2 cut(s) | 1600, 2286 |
| Bst2BI | CACGAG | 2 cut(s) | 1120, 2808 |
| Bst2UI | CCWGG | 1 cut(s) | 229 |
| Bst4CI | ACNGT | 8 cut(s) | 615, 714, 1277, 2029, 2444, 2699, 2794, 2860 |
| Bst6I | CTCTTC | 2 cut(s) | 1210, 1216 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 694 |
| BstBAI | YACGTR | 3 cut(s) | 520, 1575, 1663 |
| BstC8I | GCNNGC | 6 cut(s) | 82, 330, 1015, 1141, 1570, 2850 |
| BstDEI | CTNAG | 2 cut(s) | 872, 2660 |
| BstDSI | CCRYGG | 3 cut(s) | 69, 987, 1905 |
| BstF5I | GGATG | 6 cut(s) | 500, 949, 1361, 1414, 1782, 2110 |
| BstH2I | RGCGCY | 1 cut(s) | 173 |
| BstHHI | GCGC | 1 cut(s) | 172 |
| BstMAI | GTCTC | 1 cut(s) | 1084 |
| BstNI | CCWGG | 1 cut(s) | 229 |
| BstNSI | RCATGY | 1 cut(s) | 2582 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 674 |
| BstSCI | CCNGG | 4 cut(s) | 227, 1327, 1365, 1469 |
| BstSFI | CTRYAG | 1 cut(s) | 1497 |
| BstSNI | TACGTA | 1 cut(s) | 520 |
| BstV1I | GCAGC | 9 cut(s) | 64, 86, 247, 269, 278, 1483, 1572, 1765, 2212 |
| BstV2I | GAAGAC | 1 cut(s) | 670 |
| BstX2I | RGATCY | 5 cut(s) | 274, 1022, 1362, 2168, 2640 |
| BstYI | RGATCY | 5 cut(s) | 274, 1022, 1362, 2168, 2640 |
| BstZ17I | GTATAC | 2 cut(s) | 1600, 2286 |
| BsuI | GTATCC | 2 cut(s) | 41, 2812 |
| BsuRI | GGCC | 4 cut(s) | 1327, 1770, 2484, 2755 |
| BtgI | CCRYGG | 3 cut(s) | 69, 987, 1905 |
| BtsCI | GGATG | 6 cut(s) | 500, 949, 1361, 1414, 1782, 2110 |
| BtsI | GCAGTG | 3 cut(s) | 1506, 1570, 2472 |
| BtsIMutI | CAGTG | 6 cut(s) | 105, 1407, 1465, 1506, 1570, 2472 |
| Cac8I | GCNNGC | 6 cut(s) | 82, 330, 1015, 1141, 1570, 2850 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1691, 2798 |
| CciI | TCATGA | 2 cut(s) | 2236, 2719 |
| CfoI | GCGC | 1 cut(s) | 172 |
| Cfr13I | GGNCC | 7 cut(s) | 131, 311, 1313, 1504, 1768, 1856, 2297 |
| CseI | GACGC | 1 cut(s) | 2198 |
| Csp6I | GTAC | 7 cut(s) | 148, 605, 1377, 1660, 1709, 2566, 2709 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2146, 2181 |
| CviQI | GTAC | 7 cut(s) | 148, 605, 1377, 1660, 1709, 2566, 2709 |
| DdeI | CTNAG | 2 cut(s) | 872, 2660 |
| DraI | TTTAAA | 4 cut(s) | 795, 1074, 2061, 2308 |
| EaeI | YGGCCR | 2 cut(s) | 1325, 2753 |
| Eam1104I | CTCTTC | 2 cut(s) | 1210, 1216 |
| EarI | CTCTTC | 2 cut(s) | 1210, 1216 |
| Ecl136II | GAGCTC | 2 cut(s) | 6, 420 |
| Eco105I | TACGTA | 1 cut(s) | 520 |
| Eco130I | CCWWGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| Eco24I | GRGCYC | 2 cut(s) | 8, 422 |
| Eco31I | GGTCTC | 1 cut(s) | 1084 |
| Eco32I | GATATC | 1 cut(s) | 956 |
| Eco47I | GGWCC | 6 cut(s) | 131, 311, 1313, 1504, 1856, 2297 |
| Eco53kI | GAGCTC | 2 cut(s) | 6, 420 |
| Eco57I | CTGAAG | 1 cut(s) | 398 |
| Eco88I | CYCGRG | 2 cut(s) | 151, 572 |
| EcoICRI | GAGCTC | 2 cut(s) | 6, 420 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1768 |
| EcoRI | GAATTC | 3 cut(s) | 817, 878, 1264 |
| EcoRII | CCWGG | 1 cut(s) | 227 |
| EcoRV | GATATC | 1 cut(s) | 956 |
| EcoT14I | CCWWGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| EcoT22I | ATGCAT | 2 cut(s) | 1549, 1741 |
| EcoT38I | GRGCYC | 2 cut(s) | 8, 422 |
| ErhI | CCWWGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1587, 1619, 2567, 2599 |
| FaqI | GGGAC | 1 cut(s) | 575 |
| FauNDI | CATATG | 3 cut(s) | 690, 1516, 1964 |
| FbaI | TGATCA | 2 cut(s) | 628, 1959 |
| FblI | GTMKAC | 5 cut(s) | 120, 522, 1599, 2285, 2686 |
| FokI | GGATG | 6 cut(s) | 507, 956, 1368, 1421, 1789, 2117 |
| FriOI | GRGCYC | 2 cut(s) | 8, 422 |
| FspBI | CTAG | 5 cut(s) | 210, 308, 672, 2012, 2469 |
| GlaI | GCGC | 1 cut(s) | 171 |
| GsuI | CTGGAG | 1 cut(s) | 2808 |
| HaeII | RGCGCY | 1 cut(s) | 173 |
| HaeIII | GGCC | 4 cut(s) | 1327, 1770, 2484, 2755 |
| HapII | CCGG | 4 cut(s) | 1244, 1328, 1367, 1470 |
| HgaI | GACGC | 1 cut(s) | 2198 |
| HhaI | GCGC | 1 cut(s) | 172 |
| Hin6I | GCGC | 1 cut(s) | 170 |
| HinP1I | GCGC | 1 cut(s) | 170 |
| HincII | GTYRAC | 2 cut(s) | 2053, 2687 |
| HindII | GTYRAC | 2 cut(s) | 2053, 2687 |
| HindIII | AAGCTT | 3 cut(s) | 869, 1015, 1882 |
| HpaI | GTTAAC | 1 cut(s) | 2053 |
| HpaII | CCGG | 4 cut(s) | 1244, 1328, 1367, 1470 |
| HphI | GGTGA | 2 cut(s) | 1459, 2730 |
| HpyAV | CCTTC | 6 cut(s) | 44, 408, 1248, 1872, 2095, 2569 |
| HpyCH4III | ACNGT | 8 cut(s) | 615, 714, 1277, 2029, 2444, 2699, 2794, 2860 |
| HpyCH4IV | ACGT | 4 cut(s) | 105, 519, 1574, 1662 |
| HpyF3I | CTNAG | 2 cut(s) | 872, 2660 |
| HpySE526I | ACGT | 4 cut(s) | 105, 519, 1574, 1662 |
| HspAI | GCGC | 1 cut(s) | 170 |
| Ksp22I | TGATCA | 2 cut(s) | 628, 1959 |
| KspAI | GTTAAC | 1 cut(s) | 2053 |
| LguI | GCTCTTC | 1 cut(s) | 1216 |
| LmnI | GCTCC | 2 cut(s) | 254, 2845 |
| Lsp1109I | GCAGC | 9 cut(s) | 64, 86, 247, 269, 278, 1483, 1572, 1765, 2212 |
| MaeI | CTAG | 5 cut(s) | 210, 308, 672, 2012, 2469 |
| MaeII | ACGT | 4 cut(s) | 105, 519, 1574, 1662 |
| MaeIII | GTNAC | 6 cut(s) | 1432, 1465, 1509, 1987, 2438, 2551 |
| MboII | GAAGA | 8 cut(s) | 29, 670, 1227, 1233, 1856, 1959, 2189, 2426 |
| MfeI | CAATTG | 1 cut(s) | 2229 |
| MflI | RGATCY | 5 cut(s) | 274, 1022, 1362, 2168, 2640 |
| MhlI | GDGCHC | 2 cut(s) | 8, 422 |
| MlsI | TGGCCA | 1 cut(s) | 2755 |
| MluNI | TGGCCA | 1 cut(s) | 2755 |
| MlyI | GAGTC | 6 cut(s) | 443, 684, 840, 1343, 1697, 2770 |
| MmeI | TCCRAC | 5 cut(s) | 232, 921, 931, 1606, 2065 |
| Mox20I | TGGCCA | 1 cut(s) | 2755 |
| Mph1103I | ATGCAT | 2 cut(s) | 1549, 1741 |
| MroXI | GAANNNNTTC | 4 cut(s) | 810, 1039, 1536, 1848 |
| MscI | TGGCCA | 1 cut(s) | 2755 |
| MslI | CAYNNNNRTG | 2 cut(s) | 164, 2577 |
| Msp20I | TGGCCA | 1 cut(s) | 2755 |
| MspA1I | CMGCKG | 3 cut(s) | 77, 260, 2048 |
| MspI | CCGG | 4 cut(s) | 1244, 1328, 1367, 1470 |
| MspR9I | CCNGG | 4 cut(s) | 229, 1329, 1367, 1471 |
| MunI | CAATTG | 1 cut(s) | 2229 |
| Mva1269I | GAATGC | 1 cut(s) | 1015 |
| MvaI | CCWGG | 1 cut(s) | 229 |
| NciI | CCSGG | 3 cut(s) | 1329, 1367, 1471 |
| NcoI | CCATGG | 3 cut(s) | 69, 987, 1905 |
| NdeI | CATATG | 3 cut(s) | 690, 1516, 1964 |
| NlaIV | GGNNCC | 3 cut(s) | 1315, 1769, 2605 |
| NmuCI | GTSAC | 2 cut(s) | 1465, 1987 |
| NsiI | ATGCAT | 2 cut(s) | 1549, 1741 |
| NspI | RCATGY | 1 cut(s) | 2582 |
| PaeR7I | CTCGAG | 2 cut(s) | 151, 572 |
| PagI | TCATGA | 2 cut(s) | 2236, 2719 |
| PciSI | GCTCTTC | 1 cut(s) | 1216 |
| PctI | GAATGC | 1 cut(s) | 1015 |
| PdmI | GAANNNNTTC | 4 cut(s) | 810, 1039, 1536, 1848 |
| PfeI | GAWTC | 6 cut(s) | 16, 543, 806, 1537, 2147, 2597 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1323, 1356 |
| PfoI | TCCNGGA | 1 cut(s) | 1365 |
| PleI | GAGTC | 6 cut(s) | 443, 683, 839, 1342, 1696, 2769 |
| PpsI | GAGTC | 6 cut(s) | 443, 683, 839, 1342, 1696, 2769 |
| Ppu21I | YACGTR | 3 cut(s) | 520, 1575, 1663 |
| PshAI | GACNNNNGTC | 1 cut(s) | 674 |
| PshBI | ATTAAT | 1 cut(s) | 1839 |
| Psp124BI | GAGCTC | 2 cut(s) | 8, 422 |
| Psp6I | CCWGG | 1 cut(s) | 227 |
| PspGI | CCWGG | 1 cut(s) | 227 |
| PspN4I | GGNNCC | 3 cut(s) | 1315, 1769, 2605 |
| PspPI | GGNCC | 7 cut(s) | 131, 311, 1313, 1504, 1768, 1856, 2297 |
| PspXI | VCTCGAGB | 2 cut(s) | 151, 572 |
| PstI | CTGCAG | 1 cut(s) | 1501 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1691, 2798 |
| PsuI | RGATCY | 5 cut(s) | 274, 1022, 1362, 2168, 2640 |
| PvuII | CAGCTG | 3 cut(s) | 77, 260, 2048 |
| RsaI | GTAC | 7 cut(s) | 149, 606, 1378, 1661, 1710, 2567, 2710 |
| RsaNI | GTAC | 7 cut(s) | 148, 605, 1377, 1660, 1709, 2566, 2709 |
| RseI | CAYNNNNRTG | 2 cut(s) | 164, 2577 |
| SacI | GAGCTC | 2 cut(s) | 8, 422 |
| SalI | GTCGAC | 1 cut(s) | 2685 |
| SapI | GCTCTTC | 1 cut(s) | 1216 |
| Sau96I | GGNCC | 7 cut(s) | 131, 311, 1313, 1504, 1768, 1856, 2297 |
| SchI | GAGTC | 6 cut(s) | 443, 684, 840, 1343, 1697, 2770 |
| ScrFI | CCNGG | 4 cut(s) | 229, 1329, 1367, 1471 |
| SduI | GDGCHC | 2 cut(s) | 8, 422 |
| SfcI | CTRYAG | 1 cut(s) | 1497 |
| Sfr274I | CTCGAG | 2 cut(s) | 151, 572 |
| SinI | GGWCC | 6 cut(s) | 131, 311, 1313, 1504, 1856, 2297 |
| SlaI | CTCGAG | 2 cut(s) | 151, 572 |
| SmiI | ATTTAAAT | 1 cut(s) | 2061 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 164, 2577 |
| SmlI | CTYRAG | 5 cut(s) | 151, 363, 572, 2156, 2486 |
| SmoI | CTYRAG | 5 cut(s) | 151, 363, 572, 2156, 2486 |
| SnaBI | TACGTA | 1 cut(s) | 520 |
| SsiI | CCGC | 2 cut(s) | 264, 971 |
| SspI | AATATT | 2 cut(s) | 2273, 2304 |
| SspMI | CTAG | 5 cut(s) | 210, 308, 672, 2012, 2469 |
| SstI | GAGCTC | 2 cut(s) | 8, 422 |
| StyD4I | CCNGG | 4 cut(s) | 227, 1327, 1365, 1469 |
| StyI | CCWWGG | 6 cut(s) | 69, 307, 723, 987, 1603, 1905 |
| SwaI | ATTTAAAT | 1 cut(s) | 2061 |
| TaaI | ACNGT | 8 cut(s) | 615, 714, 1277, 2029, 2444, 2699, 2794, 2860 |
| TaiI | ACGT | 4 cut(s) | 108, 522, 1577, 1665 |
| TaqII | GACCGA | 1 cut(s) | 148 |
| TatI | WGTACW | 2 cut(s) | 147, 604 |
| TauI | GCSGC | 2 cut(s) | 266, 974 |
| TfiI | GAWTC | 6 cut(s) | 16, 543, 806, 1537, 2147, 2597 |
| TscAI | CASTG | 6 cut(s) | 105, 1407, 1465, 1506, 1570, 2479 |
| TseFI | GTSAC | 2 cut(s) | 1465, 1987 |
| TseI | GCWGC | 9 cut(s) | 74, 77, 257, 260, 266, 1496, 1560, 1753, 2225 |
| Tsp45I | GTSAC | 2 cut(s) | 1465, 1987 |
| TspGWI | ACGGA | 1 cut(s) | 1333 |
| TspRI | CASTG | 6 cut(s) | 105, 1407, 1465, 1506, 1570, 2479 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1323, 1356 |
| VpaK11BI | GGWCC | 6 cut(s) | 131, 311, 1313, 1504, 1856, 2297 |
| VspI | ATTAAT | 1 cut(s) | 1839 |
| XapI | RAATTY | 6 cut(s) | 817, 878, 1264, 1421, 1441, 2380 |
| XceI | RCATGY | 1 cut(s) | 2582 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 244, 2748, 2839 |
| XhoI | CTCGAG | 2 cut(s) | 151, 572 |
| XmaJI | CCTAGG | 1 cut(s) | 307 |
| XmiI | GTMKAC | 5 cut(s) | 120, 522, 1599, 2285, 2686 |
| XmnI | GAANNNNTTC | 4 cut(s) | 810, 1039, 1536, 1848 |
| XspI | CTAG | 5 cut(s) | 210, 308, 672, 2012, 2469 |
| Zsp2I | ATGCAT | 2 cut(s) | 1549, 1741 |