Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00236

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

32819 .. 42808

Gene Structure 9990 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G006180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2763 bp

ATGATCAAGAATCCTACCAGCCCTGTTTCTTCTTTTATCATTTTCCTTTTATTGTTTAGGAATTCCTTGGCTGATGCCCAAAACACAATGATCCCAGTAGATGTGGGTATGATCCTTGACTTTGATTCTTTGTTTGGGAAGATTGGGCTGAGCTGCGTCAACATGGCTCTATCCGACTTCTATGCCTCTCATGCTTACTATAAAACCAGGCTGGTACTACACACAAGGGACTCCATGAGAGATGCTGTTGTTGAAGCGGCTGCAGCTCTAGACTTGATAAAAAATATTGAAGTGAAAGCTATCATCATAGGGGCGGAATCATCAATGAAAGCCAACTTTGTAATTGATCTTGGAGATAAAGCTAAGGTGCCTATAATCTCATTTTCGACGGCAAATCCTTCCCTGACTTCTTTTCAGCGTTCATATTTTTTCCAAGTTGCAAAGAATGACTCATCTCAAGTGAAAGCCATAAGTGCCATAATTCAATCTTTTGGCTGGAATGAAGCAGTGCCCATTTTTGTCGACGATGAGTTTTGGGAGGGTACATTACCTTACATGATTAATGTTCTACAAGAAGTTGGTGCTCGTATTCCCTACTGCAGTGTCATTCCTCTAATGGCCACTGATGACCAAATTGTTGTGAAGCTTCAACATCTCATGACAATGAAAACAAGGGTATTCATTGTACACATGTTGCCTTCTCTTGGCTCCCGGCTTTTTGCCAAGGCAAAAGAGGTGAAGCTTGAAAATTTCAGGGTCCGATGGCACAGAAAATTCCAAATAGAGAATCCAACCATCCTTAATGTTAGATCAGATGATATTTTTGGACTGTGGGCTTATGATGCTGCTTGGGCACTAGCCATGGCAGTTGAGAAGGTTATAAATTCTACAAGCTTCAACTTTCAAAAGGTGAACATTTCTGGCAGTTTCACTGATCTAGAACGATTAGGGGTCTCTGAAAGTGGTTCTGAACTCGTCCAAGCACTATCAACGACAAAATTCAGAGGCCTTTCTGGAAATTTCAGTCTTCTTAATGGACAACTACAGTCTTCAATTTTTGAGATAATCAATGTGAATGGTAATGGGGTAAGAGGAGTTGGATATTGGACACCCAAAAATGGACTTGTTAGAAATTTAAATTCAGCAAGCAGCGGATATTCTAGTTCTACTTCCAATCCCAGTGACCTTGGACTTATTATATGGCCCGGAGACACCATCACCATTCCAAAAGGTTGGCAGATTCCTAACCATGGGAATAAGTTGAAAATTCTAGTTCCAGTGAAGCATGGGTTTAAAGAATTTGTAAATGTGACGGTGGATCCTACAACTAACACAACCATGGTCACTGGATATTGCATAGACATTTTTAAAGCAGTAATCGAAGAATTACCATACGCTGTTTCTTATGAATTTTATCCCTTTGTAAAGCCTAATGGTGAACCAGCTGGCAGCTACGAGGATTTGATCTCTCAAGTGTTTCTTGGGAACTATGATGCAGCAGTTGGAGATATAACCATTAGAGCAAATAGGTCATCATTGGTTGACTTTACATTGCCGTACACAGAATCTGGAGTATCAATGGTGGTGCCTATCAAAGTGAAGAAAAGTAGGCAAAGTGCATTGGTGTTCTTGAAGCCTTTTACTTGGGACCTTTGGGTAACAAGCTGTTGCTTTTTCTTTGTCATTGGGTTCGTGATCTGGGTTCTTGAACACCGATTGAATGAAGATTTTCGTGGGCCTCCGTCACACCAGATTGGTACAACCTTTTGGTTTTCTTTCTCAACCATGGTTTTTGCACAACGAGAGAAAGTAGTAAGCAACTTAGCTAGGACTGTGGTGATCGTGTGGTGCTTTGTTGTCCTCATACTGACACAAAGTTATACTGCCAGTTTGACATCACTTTTAACAGTTCAACAGCTCCAACCAACCGTTGCTAATGTAGGTCTGCTCCTCAAGAATGGAGACTTCGTTGGTTTCCAAGAAGGTTCTTCTGTACAGAACTTTTTGACAAATGAACTGGGATTTCATGTGGAAAAGCTTAGGGCATATAGGTCTGGAGAAGATCTGGCTCAACTGTTTGAGAAAGGGGCAATTTCTGCTGCTTTTGATGAAACCCCTTTCATGAACCTTTTCCTTTCAACTTATTGCTCAAAATATACCATGGTTGAGCCAATACTATCCAAAACTGGCAGCGGCTTTGCATTTGCCTTTACGAAAGGTGTGCCTCTTACACTTGATGTTTCAAGGATGATCACTCATTTGCAAGAGGGAGGTAAAATGAAGACTGTCATGGACAAGTGGTTCAAGAAAGAAGCAAGTTGTACATACCCCAGCATAGACTCTAATTCCAACAGTCCTCTTAGCCTTGATAGCCTTTGGGGTCTTTTCCTTATTGTTGGAGTTACTTCGTCATCAGCTCTTCTGATACATGTAGCTATGGTCTTCTATCAGAATCGGCACGTCTTGATACCCTCGGATCCAGAACTCTCTCTTTGGAGGAAAATGAGTCTCATATTACGGATATTCGACCAAAGAGACCTCCCTTCGCATACTTTTTGGCGCAGGGATCAACAAGATAATGCTCAAGCTAGATCTTCAGTTGATTCCTCACCGAAAATCATAACCAATAGCTTTCCAAGGCCATCAGATTTTTCACACCACGCAAGTTCAGATATTACTGAATTTGAAATGGAGGAAACACCTTCTAGTTCTACCAACGGGGATTTGAATCCCAGTGGTCAAGCCATCCAAGAGACTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

920

Amino Acids

102.54

Weight (kDa)

6.38

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peripla_BP_6	PF13458	32 - 209	6.3e-07	Periplasmic binding protein
ANF_receptor	PF01094	52 - 255	1.1e-42	Receptor family ligand binding region
ANF_receptor	PF01094	251 - 361	3.4e-14	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	441 - 529	9.2e-11	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	445 - 769	4.3e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	548 - 801	1.3e-36	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	881
AccB1I	GGYRCC	2 cut(s)	367, 1585
AccI	GTMKAC	1 cut(s)	522
AciI	CCGC	4 cut(s)	257, 314, 1152, 2193
AclWI	GGATC	7 cut(s)	85, 106, 1313, 1326, 2471, 2484, 2574
AcoI	YGGCCR	1 cut(s)	618
AcuI	CTGAAG	1 cut(s)	2580
AfaI	GTAC	7 cut(s)	216, 544, 687, 1559, 1759, 1995, 2323
AfiI	CCNNNNNNNGG	3 cut(s)	704, 1118, 1250
AflIII	ACRYGT	2 cut(s)	690, 2428
AjiI	CACGTC	1 cut(s)	2461
AjnI	CCWGG	1 cut(s)	206
AloI	GAACNNNNNNTCC	2 cut(s)	2285, 2317
Alw21I	GWGCWC	1 cut(s)	586
Alw26I	GTCTC	6 cut(s)	958, 1203, 1956, 2513, 2529, 2747
AlwI	GGATC	7 cut(s)	85, 106, 1313, 1326, 2471, 2484, 2574
AlwNI	CAGNNNCTG	1 cut(s)	1568
AoxI	GGCC	5 cut(s)	618, 1006, 1202, 1736, 2639
ApeKI	GCWGC	9 cut(s)	153, 260, 263, 845, 1149, 1449, 1496, 2099, 2190
AseI	ATTAAT	1 cut(s)	561
Asp700I	GAANNNNTTC	2 cut(s)	1728, 2129
AspLEI	GCGC	1 cut(s)	2562
AspS9I	GGNCC	4 cut(s)	757, 1203, 1648, 1736
AsuC2I	CCSGG	2 cut(s)	712, 1206
AsuHPI	GGTGA	6 cut(s)	748, 922, 1210, 1448, 1849, 2601
AvaII	GGWCC	2 cut(s)	757, 1648
BaeGI	GKGCMC	2 cut(s)	513, 856
BalI	TGGCCA	1 cut(s)	620
BamHI	GGATCC	2 cut(s)	1318, 2476
BanI	GGYRCC	2 cut(s)	367, 1585
BbsI	GAAGAC	4 cut(s)	1019, 1041, 2288, 2434
Bbv12I	GWGCWC	1 cut(s)	586
BbvI	GCAGC	9 cut(s)	140, 247, 275, 832, 1161, 1461, 1508, 2086, 2202
BccI	CCATC	5 cut(s)	756, 803, 1223, 2650, 2753
BceAI	ACGGC	2 cut(s)	405, 1540
BcgI	CGANNNNNNTGC	4 cut(s)	164, 198, 2203, 2237
BciT130I	CCWGG	1 cut(s)	208
BclI	TGATCA	2 cut(s)	3, 2250
BcnI	CCSGG	2 cut(s)	712, 1206
BcoDI	GTCTC	6 cut(s)	958, 1203, 1956, 2513, 2529, 2747
BfaI	CTAG	8 cut(s)	269, 857, 938, 1161, 1271, 1827, 2589, 2706
BfmI	CTRYAG	3 cut(s)	261, 598, 1043
BglII	AGATCT	2 cut(s)	2062, 2591
BlpI	GCTNAGC	1 cut(s)	149
Bme1390I	CCNGG	3 cut(s)	208, 712, 1206
Bme18I	GGWCC	2 cut(s)	757, 1648
BmgBI	CACGTC	1 cut(s)	2461
BmgT120I	GGNCC	4 cut(s)	757, 1203, 1648, 1736
BmiI	GGNNCC	7 cut(s)	369, 709, 758, 1320, 1587, 1649, 2478
BmrFI	CCNGG	3 cut(s)	208, 712, 1206
BmrI	ACTGGG	4 cut(s)	89, 1173, 2027, 2727
BmsI	GCATC	4 cut(s)	64, 232, 832, 1483
BmuI	ACTGGG	4 cut(s)	89, 1173, 2027, 2727
BpiI	GAAGAC	4 cut(s)	1019, 1041, 2288, 2434
BpmI	CTGGAG	2 cut(s)	1590, 2076
Bpu10I	CCTNAGC	2 cut(s)	363, 2039
Bpu1102I	GCTNAGC	1 cut(s)	149
BpuEI	CTTGAG	4 cut(s)	441, 1455, 1937, 2568
BpuMI	CCSGG	2 cut(s)	712, 1206
BsaBI	GATNNNNATC	1 cut(s)	2727
BsaI	GGTCTC	2 cut(s)	958, 2529
BsaXI	ACNNNNNCTCC	2 cut(s)	1953, 1983
Bsc4I	CCNNNNNNNGG	3 cut(s)	704, 1118, 1250
Bse1I	ACTGG	8 cut(s)	95, 1179, 1277, 1351, 1887, 2022, 2191, 2733
Bse3DI	GCAATG	1 cut(s)	1550
Bse8I	GATNNNNATC	1 cut(s)	2727
BseBI	CCWGG	1 cut(s)	208
BseGI	GGATG	3 cut(s)	795, 2253, 2745
BseJI	GATNNNNATC	1 cut(s)	2727
BseLI	CCNNNNNNNGG	3 cut(s)	704, 1118, 1250
BseMI	GCAATG	1 cut(s)	1550
BseMII	CTCAG	1 cut(s)	140
BseNI	ACTGG	8 cut(s)	95, 1179, 1277, 1351, 1887, 2022, 2191, 2733
BseRI	GAGGAG	2 cut(s)	1107, 1940
BseSI	GKGCMC	2 cut(s)	513, 856
BseXI	GCAGC	9 cut(s)	140, 247, 275, 832, 1161, 1461, 1508, 2086, 2202
BseYI	CCCAGC	1 cut(s)	2330
BshFI	GGCC	5 cut(s)	620, 1008, 1204, 1738, 2641
BshNI	GGYRCC	2 cut(s)	367, 1585
BsiHKAI	GWGCWC	1 cut(s)	586
BsiSI	CCGG	2 cut(s)	712, 1206
BslFI	GGGAC	2 cut(s)	242, 1661
BslI	CCNNNNNNNGG	3 cut(s)	704, 1118, 1250
BsmAI	GTCTC	6 cut(s)	958, 1203, 1956, 2513, 2529, 2747
BsmFI	GGGAC	2 cut(s)	242, 1661
BsnI	GGCC	5 cut(s)	620, 1008, 1204, 1738, 2641
Bso31I	GGTCTC	2 cut(s)	958, 2529
Bsp1286I	GDGCHC	3 cut(s)	513, 586, 856
Bsp1407I	TGTACA	3 cut(s)	685, 1993, 2321
Bsp1720I	GCTNAGC	1 cut(s)	149
Bsp19I	CCATGG	5 cut(s)	861, 1249, 1338, 1785, 2160
BspACI	CCGC	4 cut(s)	257, 314, 1152, 2193
BspANI	GGCC	5 cut(s)	620, 1008, 1204, 1738, 2641
BspCNI	CTCAG	1 cut(s)	141
BspHI	TCATGA	2 cut(s)	657, 2121
BspLI	GGNNCC	7 cut(s)	369, 709, 758, 1320, 1587, 1649, 2478
BspMAI	CTGCAG	2 cut(s)	265, 602
BspPI	GGATC	7 cut(s)	85, 106, 1313, 1326, 2471, 2484, 2574
BspQI	GCTCTTC	1 cut(s)	2424
BspT107I	GGYRCC	2 cut(s)	367, 1585
BspTNI	GGTCTC	2 cut(s)	958, 2529
BsrDI	GCAATG	1 cut(s)	1550
BsrGI	TGTACA	3 cut(s)	685, 1993, 2321
BsrI	ACTGG	8 cut(s)	95, 1179, 1277, 1351, 1887, 2022, 2191, 2733
BssT1I	CCWWGG	9 cut(s)	66, 723, 861, 1186, 1249, 1338, 1785, 2160, 2636
Bst2UI	CCWGG	1 cut(s)	208
Bst4CI	ACNGT	9 cut(s)	831, 1047, 1315, 1834, 1909, 1930, 2076, 2287, 2354
Bst6I	CTCTTC	1 cut(s)	2424
BstAPI	GCANNNNNTGC	1 cut(s)	2096
BstAUI	TGTACA	3 cut(s)	685, 1993, 2321
BstC8I	GCNNGC	2 cut(s)	1147, 1447
BstDEI	CTNAG	5 cut(s)	149, 363, 1822, 2039, 2360
BstDSI	CCRYGG	5 cut(s)	861, 1249, 1338, 1785, 2160
BstF5I	GGATG	3 cut(s)	795, 2253, 2745
BstHHI	GCGC	1 cut(s)	2562
BstMAI	GTCTC	6 cut(s)	958, 1203, 1956, 2513, 2529, 2747
BstMWI	GCNNNNNNNGC	7 cut(s)	191, 263, 473, 842, 851, 2096, 2370
BstNI	CCWGG	1 cut(s)	208
BstNSI	RCATGY	2 cut(s)	694, 2432
BstSCI	CCNGG	3 cut(s)	206, 710, 1204
BstSFI	CTRYAG	3 cut(s)	261, 598, 1043
BstSLI	GKGCMC	2 cut(s)	513, 856
BstV1I	GCAGC	9 cut(s)	140, 247, 275, 832, 1161, 1461, 1508, 2086, 2202
BstV2I	GAAGAC	4 cut(s)	1019, 1041, 2288, 2434
BstX2I	RGATCY	4 cut(s)	1318, 2062, 2476, 2591
BstXI	CCANNNNNNTGG	1 cut(s)	1233
BstYI	RGATCY	4 cut(s)	1318, 2062, 2476, 2591
BsuRI	GGCC	5 cut(s)	620, 1008, 1204, 1738, 2641
BtgI	CCRYGG	5 cut(s)	861, 1249, 1338, 1785, 2160
BtrI	CACGTC	1 cut(s)	2461
BtsCI	GGATG	3 cut(s)	795, 2253, 2745
BtsI	GCAGTG	2 cut(s)	513, 607
BtsIMutI	CAGTG	8 cut(s)	513, 607, 621, 930, 1186, 1284, 1344, 2740
Cac8I	GCNNGC	2 cut(s)	1147, 1447
CaiI	CAGNNNCTG	1 cut(s)	1568
CciI	TCATGA	2 cut(s)	657, 2121
CfoI	GCGC	1 cut(s)	2562
Cfr13I	GGNCC	4 cut(s)	757, 1203, 1648, 1736
CseI	GACGC	1 cut(s)	145
Csp6I	GTAC	7 cut(s)	215, 543, 686, 1558, 1758, 1994, 2322
CviQI	GTAC	7 cut(s)	215, 543, 686, 1558, 1758, 1994, 2322
DdeI	CTNAG	5 cut(s)	149, 363, 1822, 2039, 2360
DraI	TTTAAA	3 cut(s)	1137, 1294, 1369
EaeI	YGGCCR	1 cut(s)	618
Eam1104I	CTCTTC	1 cut(s)	2424
EarI	CTCTTC	1 cut(s)	2424
EciI	GGCGGA	1 cut(s)	329
Eco130I	CCWWGG	9 cut(s)	66, 723, 861, 1186, 1249, 1338, 1785, 2160, 2636
Eco147I	AGGCCT	1 cut(s)	1008
Eco31I	GGTCTC	2 cut(s)	958, 2529
Eco47I	GGWCC	2 cut(s)	757, 1648
Eco57I	CTGAAG	1 cut(s)	2580
EcoO109I	RGGNCCY	1 cut(s)	1648
EcoRI	GAATTC	1 cut(s)	61
EcoRII	CCWGG	1 cut(s)	206
EcoT14I	CCWWGG	9 cut(s)	66, 723, 861, 1186, 1249, 1338, 1785, 2160, 2636
ErhI	CCWWGG	9 cut(s)	66, 723, 861, 1186, 1249, 1338, 1785, 2160, 2636
FalI	AAGNNNNNCTT	2 cut(s)	1464, 1496
FaqI	GGGAC	2 cut(s)	242, 1661
FbaI	TGATCA	2 cut(s)	3, 2250
FblI	GTMKAC	1 cut(s)	522
FokI	GGATG	3 cut(s)	782, 2260, 2732
FspBI	CTAG	8 cut(s)	269, 857, 938, 1161, 1271, 1827, 2589, 2706
GlaI	GCGC	1 cut(s)	2561
GsaI	CCCAGC	1 cut(s)	2334
GsuI	CTGGAG	2 cut(s)	1590, 2076
HaeIII	GGCC	5 cut(s)	620, 1008, 1204, 1738, 2641
HapII	CCGG	2 cut(s)	712, 1206
HgaI	GACGC	1 cut(s)	145
HhaI	GCGC	1 cut(s)	2562
Hin6I	GCGC	1 cut(s)	2560
HinP1I	GCGC	1 cut(s)	2560
HincII	GTYRAC	3 cut(s)	160, 523, 1543
HindII	GTYRAC	3 cut(s)	160, 523, 1543
HindIII	AAGCTT	4 cut(s)	644, 740, 892, 2036
HpaII	CCGG	2 cut(s)	712, 1206
HphI	GGTGA	6 cut(s)	748, 922, 1210, 1448, 1849, 2601
Hpy166II	GTNNAC	7 cut(s)	160, 523, 688, 913, 1439, 1543, 1560
Hpy8I	GTNNAC	7 cut(s)	160, 523, 688, 913, 1439, 1543, 1560
Hpy99I	CGWCG	2 cut(s)	391, 527
HpyAV	CCTTC	6 cut(s)	408, 708, 868, 1976, 2553, 2712
HpyCH4III	ACNGT	9 cut(s)	831, 1047, 1315, 1834, 1909, 1930, 2076, 2287, 2354
HpyCH4IV	ACGT	1 cut(s)	2460
HpyCH4V	TGCA	9 cut(s)	263, 440, 600, 1356, 1496, 1619, 1796, 2201, 2263
HpyF10VI	GCNNNNNNNGC	7 cut(s)	191, 263, 473, 842, 851, 2096, 2370
HpyF3I	CTNAG	5 cut(s)	149, 363, 1822, 2039, 2360
HpySE526I	ACGT	1 cut(s)	2460
HspAI	GCGC	1 cut(s)	2560
Ksp22I	TGATCA	2 cut(s)	3, 2250
LguI	GCTCTTC	1 cut(s)	2424
LmnI	GCTCC	3 cut(s)	713, 1923, 1953
Lsp1109I	GCAGC	9 cut(s)	140, 247, 275, 832, 1161, 1461, 1508, 2086, 2202
LweI	GCATC	4 cut(s)	64, 232, 832, 1483
MaeI	CTAG	8 cut(s)	269, 857, 938, 1161, 1271, 1827, 2589, 2706
MaeII	ACGT	1 cut(s)	2460
MaeIII	GTNAC	6 cut(s)	1181, 1309, 1342, 1657, 1743, 2401
MflI	RGATCY	4 cut(s)	1318, 2062, 2476, 2591
MhlI	GDGCHC	3 cut(s)	513, 586, 856
MlsI	TGGCCA	1 cut(s)	620
MluNI	TGGCCA	1 cut(s)	620
MlyI	GAGTC	5 cut(s)	224, 443, 2333, 2515, 2749
MmeI	TCCRAC	7 cut(s)	198, 815, 1078, 1483, 1945, 2373, 2377
Mox20I	TGGCCA	1 cut(s)	620
MroXI	GAANNNNTTC	2 cut(s)	1728, 2129
MscI	TGGCCA	1 cut(s)	620
MseI	TTAA	7 cut(s)	561, 801, 1032, 1136, 1293, 1368, 1904
MslI	CAYNNNNRTG	2 cut(s)	662, 1337
Msp20I	TGGCCA	1 cut(s)	620
MspA1I	CMGCKG	3 cut(s)	1152, 1445, 2193
MspI	CCGG	2 cut(s)	712, 1206
MspR9I	CCNGG	3 cut(s)	208, 712, 1206
MvaI	CCWGG	1 cut(s)	208
MwoI	GCNNNNNNNGC	7 cut(s)	191, 263, 473, 842, 851, 2096, 2370
NciI	CCSGG	2 cut(s)	712, 1206
NcoI	CCATGG	5 cut(s)	861, 1249, 1338, 1785, 2160
NlaIV	GGNNCC	7 cut(s)	369, 709, 758, 1320, 1587, 1649, 2478
NmuCI	GTSAC	4 cut(s)	1181, 1309, 1342, 1743
NspI	RCATGY	2 cut(s)	694, 2432
PagI	TCATGA	2 cut(s)	657, 2121
PceI	AGGCCT	1 cut(s)	1008
PciI	ACATGT	2 cut(s)	690, 2428
PciSI	GCTCTTC	1 cut(s)	2424
PdmI	GAANNNNTTC	2 cut(s)	1728, 2129
PfeI	GAWTC	9 cut(s)	10, 125, 317, 787, 1240, 1565, 2452, 2603, 2728
PleI	GAGTC	5 cut(s)	224, 443, 2333, 2514, 2749
PpsI	GAGTC	5 cut(s)	224, 443, 2333, 2514, 2749
PpuMI	RGGWCCY	1 cut(s)	1648
PscI	ACATGT	2 cut(s)	690, 2428
PshBI	ATTAAT	1 cut(s)	561
PsiI	TTATAA	1 cut(s)	881
Psp5II	RGGWCCY	1 cut(s)	1648
Psp6I	CCWGG	1 cut(s)	206
PspFI	CCCAGC	1 cut(s)	2330
PspGI	CCWGG	1 cut(s)	206
PspN4I	GGNNCC	7 cut(s)	369, 709, 758, 1320, 1587, 1649, 2478
PspPI	GGNCC	4 cut(s)	757, 1203, 1648, 1736
PspPPI	RGGWCCY	1 cut(s)	1648
PstI	CTGCAG	2 cut(s)	265, 602
PstNI	CAGNNNCTG	1 cut(s)	1568
PsuI	RGATCY	4 cut(s)	1318, 2062, 2476, 2591
PvuII	CAGCTG	1 cut(s)	1445
RsaI	GTAC	7 cut(s)	216, 544, 687, 1559, 1759, 1995, 2323
RsaNI	GTAC	7 cut(s)	215, 543, 686, 1558, 1758, 1994, 2322
RseI	CAYNNNNRTG	2 cut(s)	662, 1337
SalI	GTCGAC	1 cut(s)	521
SapI	GCTCTTC	1 cut(s)	2424
SaqAI	TTAA	7 cut(s)	561, 801, 1032, 1136, 1293, 1368, 1904
Sau96I	GGNCC	4 cut(s)	757, 1203, 1648, 1736
SchI	GAGTC	5 cut(s)	224, 443, 2333, 2515, 2749
ScrFI	CCNGG	3 cut(s)	208, 712, 1206
SduI	GDGCHC	3 cut(s)	513, 586, 856
SfaNI	GCATC	4 cut(s)	64, 232, 832, 1483
SfcI	CTRYAG	3 cut(s)	261, 598, 1043
SinI	GGWCC	2 cut(s)	757, 1648
SmiI	ATTTAAAT	1 cut(s)	1137
SmiMI	CAYNNNNRTG	2 cut(s)	662, 1337
SmlI	CTYRAG	4 cut(s)	456, 1470, 1952, 2583
SmoI	CTYRAG	4 cut(s)	456, 1470, 1952, 2583
SseBI	AGGCCT	1 cut(s)	1008
SsiI	CCGC	4 cut(s)	257, 314, 1152, 2193
SspI	AATATT	1 cut(s)	286
SspMI	CTAG	8 cut(s)	269, 857, 938, 1161, 1271, 1827, 2589, 2706
StuI	AGGCCT	1 cut(s)	1008
StyD4I	CCNGG	3 cut(s)	206, 710, 1204
StyI	CCWWGG	9 cut(s)	66, 723, 861, 1186, 1249, 1338, 1785, 2160, 2636
SwaI	ATTTAAAT	1 cut(s)	1137
TaaI	ACNGT	9 cut(s)	831, 1047, 1315, 1834, 1909, 1930, 2076, 2287, 2354
TaiI	ACGT	1 cut(s)	2463
TaqI	TCGA	5 cut(s)	386, 522, 1380, 2526, 2758
TatI	WGTACW	3 cut(s)	685, 1993, 2321
TauI	GCSGC	2 cut(s)	260, 2196
TfiI	GAWTC	9 cut(s)	10, 125, 317, 787, 1240, 1565, 2452, 2603, 2728
Tru1I	TTAA	7 cut(s)	561, 801, 1032, 1136, 1293, 1368, 1904
Tru9I	TTAA	7 cut(s)	561, 801, 1032, 1136, 1293, 1368, 1904
TscAI	CASTG	8 cut(s)	513, 607, 628, 937, 1186, 1284, 1351, 2740
TseFI	GTSAC	4 cut(s)	1181, 1309, 1342, 1743
TseI	GCWGC	9 cut(s)	153, 260, 263, 845, 1149, 1449, 1496, 2099, 2190
Tsp45I	GTSAC	4 cut(s)	1181, 1309, 1342, 1743
TspGWI	ACGGA	2 cut(s)	1731, 2533
TspRI	CASTG	8 cut(s)	513, 607, 628, 937, 1186, 1284, 1351, 2740
VpaK11BI	GGWCC	2 cut(s)	757, 1648
VspI	ATTAAT	1 cut(s)	561
XbaI	TCTAGA	2 cut(s)	268, 937
XceI	RCATGY	2 cut(s)	694, 2432
XmiI	GTMKAC	1 cut(s)	522
XmnI	GAANNNNTTC	2 cut(s)	1728, 2129
XspI	CTAG	8 cut(s)	269, 857, 938, 1161, 1271, 1827, 2589, 2706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.