Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

9535059 .. 9538444

Gene Structure 3386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G27100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGAAGAGAGAAAACAACCTCGTTCTCAGCTTACTCTTCTTTGTAATCGTCTTCCTGATGCAGGTCGGAGAAGCACAAAATAGGATAACCAATGTAAATGTGGGAATCGTGAATGATATCGGAACGGCTTACTCCAACATGACTTTGCTCTGTATCAACATGTCTCTTTCTGATTTCTACTCTTCTCATCCAGAAACCCAAACAAGGCTTGTAACCACCGTTGTTGACTCCAAAAATGATGTTGTTACCGCAGCAGCAGCAGCTCTTGATCTGATAACGAACAAGGAAGTGAAAGCGATTCTAGGGCCATGGACTTCGATGCAGGCTCAATTCATGATTGAGATGGGACAAAAATCTCAGGTGCCGATTGTTACGTATTCTGCAACAAGTCCGTCCCTCGCTTCCATCCGTAGTCAATACTTCTTTCGGGCTACGTATGATGATTCATCTCAAGTGCACGCCATTAAAGAAATCATCAAACTTTTTGGTTGGAGAGAGGTTGCACCTGTATATGTTGACGACACATTTGGCGAAGGTATAATGCCTCGTCTTACAGATGTGTTACAAGAGATTAACGTTCGTATACCTTATAGGACCGTGATCTCTCCCAATGCCACGGATGATGAAATATCTGTGGAACTTCTCCGGATGATGACTCTACCCACTAGAGTATTTGTTGTCCACCTTGTTGAATTGCTTGCCTCAAGATTTTTTGCGAAAGCTACGGAAATTGGTTTGATGAAACAAGGATATGTCTGGATCCTCACCAACACAATTACCGATGTTCTAAGTATCATGAACGAGACGGAAATTGAAACAATGCAAGGGGTATTGGGTGTAAAGACTTATGTCCCAAGATCCAAAGAGCTTGAAAACTTTAGATCTCGATGGACGAAGAGATTCCCAATTTCTGACCTGAACGTATATGGATTATGGGCATATGATGCCACCACTGCATTGGCATTGGCCATCGAAGAAGCTGGGACATCAAATTTGACATTTGTCAAGATGGATGCCAAGAGGAACGTGTCTGAACTCCAGGGTCTAGGTGTATCTCAATATGGTCCAAAACTTCTCCAGACGCTCTCTCGAGTTCGGTTCCAAGGTCTTGCTGGTGATTTCCAATTTATCAATGGAGAATTGCAGCCATCAGTCTTTGAGATTGTTAATGTGAATGGGCAAGGAGGAAGGACCATAGGATTCTGGATGAAAGAGTATGGTCTCTTTAAGAACGTGGACCAAAAACCAGCTAGCAAGACCACTTTCTCTTCTTGGCAAGATCGACTCAGACCAATTATATGGCCTGGAGACACTACTTCCGTACCCAAAGGATGGGAAATCCCGACAAATGGGAAAAGGCTGCAGATAGGCGTCCCAGTTAATAACACTTTTCAACAATTTGTGAAAGCTACTAGGGATCCTATCACCAATTCAACAATTTTCAGTGGATTCAGCATCGACTACTTTGAGGCTGTAATTCAAGCGATTCCCTATGATATTTCCTATGACTTCATTCCTTTCCAAGATGGTGGTTATGATGCCTTAGTCTACCAAGTGTATCTTGGGAAATATGATGCTGTTGTGGCAGATACAACAATATCGTCAAATAGGTCAATGTATGTTGATTTCTCATTGCCATACACACCATCAGGCGTAGGTCTTGTCGTCCCTGTTAAAGACAGTGTTAGAAGAAGCAGTACCATCTTTTTGATGCCTTTGACTTTGGCACTTTGGCTAATCAGCCTTTTGTCCTTTTTCATTATTGGTCTTGTCGTATGGGTTCTTGAACATAGGGTAAATCCAGACTTTGATGGGCCTGGCCAGTATCAACTCAGCACTATCTTCTGGTTTTCTTTCTCCATTATGGTCTTTGCGCCGAGAGAACGAGTGCTTAGCTTCTGGGCAAGGGTCGTGGTTATCATTTGGTACTTCTTAGTACTTGTGTTAACTCAGAGTTACACTGCTAGTTTGGCGTCGCTTCTTACAACACAACACCTTCATCCAACGGTAACCAATATAAATAGCTTGCTGGCAAAAGGAGAATCTGTTGGATATCAAAGTTCTTTCATTTTGGGAAGACTCAGGGACTCAGGTTTCTCAGAGGCTAGTCTTGTATCCTATGGGTCACCAGAACACTGTGATGCGCTACTGAGCAAAGGACAAGCAGAAGGTGGTGTTTCTGCGGTTTTAATGGAAGTACCTTACGTGAGAATTTTTCTGGGACAATACTGTAACAAGTACAAAATGGTTCAAACTCCGTTCAAGGTCGATGGATTAGGCTTTGTCTTTCCCATTGGATCCCCTCTAGTGGCTGATATTTCAAGGGCCATTCTAAAAGTGGAAGAGTCGAACAAGGCAAACCAACTCGAGAATGCATGGTTCAAGCCAATCGATGAAAGCTGCCCAGATCCACTCACCAACCCCGATCCAAATCCTTCAGTATCCTTCCGGCAACTTGGCTTTGATAGTTTTTGGGTTTTATTCCTTGTTGCCGCCATAGTTTGCACTATGGCATTGTTGAAATTTGTGTATCAATTCTTGAAGGAGAACCCAAATCAAAGGAACCTGCGAGTATTGTGGGAAAAGTTCAATGAGCCGGATCAAAAGTCATACATAAAAGATGTGACGAAATGTCAATGCTCCTCAGGTCAAGGCATGCCAAAGAATGGCCAAGAAGGAGCAAACGCAGTAAACAATGGCAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

901

Amino Acids

100.9

Weight (kDa)

5.87

Isoelectric Point (pI)

34.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	50 - 393	2.2e-84	Receptor family ligand binding region
Peripla_BP_6	PF13458	71 - 334	4.5e-24	Periplasmic binding protein
SBP_bac_3	PF00497	479 - 795	1.1e-10	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	575 - 834	4.4e-35	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	52, 2574
AccB1I	GGYRCC	1 cut(s)	361
AccB7I	CCANNNNNTGG	2 cut(s)	1332, 2666
AccI	GTMKAC	2 cut(s)	583, 1548
AccIII	TCCGGA	1 cut(s)	645
AciI	CCGC	3 cut(s)	249, 2183, 2493
AclI	AACGTT	1 cut(s)	576
AcoI	YGGCCR	3 cut(s)	966, 1819, 2668
AcsI	RAATTY	3 cut(s)	991, 2211, 2522
AcuI	CTGAAG	1 cut(s)	2421
AcyI	GRCGYC	2 cut(s)	1371, 1973
AfaI	GTAC	6 cut(s)	1323, 1699, 1928, 1938, 2199, 2240
AfiI	CCNNNNNNNGG	6 cut(s)	61, 204, 1332, 1349, 2308, 2666
AflIII	ACRYGT	2 cut(s)	159, 1026
AhdI	GACNNNNNGTC	1 cut(s)	2631
AjnI	CCWGG	3 cut(s)	1038, 1303, 1816
Alw21I	GWGCWC	1 cut(s)	459
Alw26I	GTCTC	4 cut(s)	168, 797, 1226, 1302
Alw44I	GTGCAC	1 cut(s)	455
Ama87I	CYCGRG	2 cut(s)	1089, 2366
Aor13HI	TCCGGA	1 cut(s)	645
AoxI	GGCC	7 cut(s)	305, 966, 1301, 1814, 1819, 2325, 2668
ApaLI	GTGCAC	1 cut(s)	455
ApeKI	GCWGC	7 cut(s)	251, 254, 257, 260, 1144, 1360, 2400
ApoI	RAATTY	3 cut(s)	991, 2211, 2522
ArsI	GACNNNNNNTTYG	4 cut(s)	509, 541, 976, 1008
Asp700I	GAANNNNTTC	1 cut(s)	899
AspLEI	GCGC	2 cut(s)	1876, 2146
AspS9I	GGNCC	7 cut(s)	305, 594, 1064, 1191, 1237, 1814, 2325
AsuHPI	GGTGA	5 cut(s)	757, 1127, 1417, 2118, 2407
AsuNHI	GCTAGC	1 cut(s)	1250
AvaI	CYCGRG	2 cut(s)	1089, 2366
AvaII	GGWCC	4 cut(s)	594, 1064, 1191, 1237
AxyI	CCTNAGG	1 cut(s)	2644
BaeGI	GKGCMC	1 cut(s)	459
BaeI	ACNNNNGTAYC	2 cut(s)	1305, 1338
BalI	TGGCCA	3 cut(s)	968, 1821, 2670
BamHI	GGATCC	3 cut(s)	759, 1417, 2297
BanI	GGYRCC	1 cut(s)	361
BarI	GAAGNNNNNNTAC	2 cut(s)	1681, 1713
BbsI	GAAGAC	2 cut(s)	43, 2083
Bbv12I	GWGCWC	1 cut(s)	459
BbvI	GCAGC	7 cut(s)	263, 266, 269, 272, 1156, 1347, 2387
BceAI	ACGGC	1 cut(s)	141
BciT130I	CCWGG	3 cut(s)	1040, 1305, 1818
BciVI	GTATCC	2 cut(s)	2125, 2452
BcoDI	GTCTC	4 cut(s)	168, 797, 1226, 1302
BfaI	CTAG	8 cut(s)	302, 666, 1046, 1251, 1413, 1965, 2106, 2306
BfmI	CTRYAG	1 cut(s)	1361
BfuAI	ACCTGC	2 cut(s)	52, 2574
BfuI	GTATCC	2 cut(s)	2125, 2452
BglII	AGATCT	1 cut(s)	881
BisI	GCNGC	8 cut(s)	252, 255, 258, 261, 1145, 1361, 2401, 2493
BlpI	GCTNAGC	1 cut(s)	1892
BlsI	GCNGC	8 cut(s)	253, 256, 259, 262, 1146, 1362, 2402, 2494
BmcAI	AGTACT	1 cut(s)	1938
Bme1390I	CCNGG	3 cut(s)	1040, 1305, 1818
Bme18I	GGWCC	4 cut(s)	594, 1064, 1191, 1237
BmeRI	GACNNNNNGTC	1 cut(s)	2631
BmeT110I	CYCGRG	2 cut(s)	1089, 2366
BmgT120I	GGNCC	7 cut(s)	305, 594, 1064, 1191, 1237, 1814, 2325
BmiI	GGNNCC	6 cut(s)	363, 761, 1100, 1419, 2299, 2564
BmrFI	CCNGG	3 cut(s)	1040, 1305, 1818
BmrI	ACTGGG	1 cut(s)	1370
BmsI	GCATC	9 cut(s)	48, 309, 934, 1003, 1464, 1528, 1564, 1701, 2131
BmtI	GCTAGC	1 cut(s)	1254
BmuI	ACTGGG	1 cut(s)	1370
BoxI	GACNNNNGTC	2 cut(s)	848, 1001
BpiI	GAAGAC	2 cut(s)	43, 2083
BpmI	CTGGAG	3 cut(s)	1022, 1061, 1326
Bpu1102I	GCTNAGC	1 cut(s)	1892
BpuEI	CTTGAG	2 cut(s)	435, 688
Bsa29I	ATCGAT	1 cut(s)	2391
BsaAI	YACGTR	3 cut(s)	375, 435, 2206
BsaBI	GATNNNNATC	1 cut(s)	2430
BsaHI	GRCGYC	2 cut(s)	1371, 1973
BsaI	GGTCTC	1 cut(s)	1226
BsaJI	CCNNGG	4 cut(s)	308, 615, 1039, 1102
BsaWI	WCCGGW	1 cut(s)	645
BsaXI	ACNNNNNCTCC	2 cut(s)	2031, 2061
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 204, 1332, 1349, 2308, 2666
Bse1I	ACTGG	2 cut(s)	1376, 1822
Bse21I	CCTNAGG	1 cut(s)	2644
Bse3DI	GCAATG	1 cut(s)	1631
Bse8I	GATNNNNATC	1 cut(s)	2430
BseAI	TCCGGA	1 cut(s)	645
BseBI	CCWGG	3 cut(s)	1040, 1305, 1818
BseCI	ATCGAT	1 cut(s)	2391
BseDI	CCNNGG	4 cut(s)	308, 615, 1039, 1102
BseGI	GGATG	8 cut(s)	187, 405, 625, 654, 1018, 1212, 1337, 1999
BseJI	GATNNNNATC	1 cut(s)	2430
BseLI	CCNNNNNNNGG	6 cut(s)	61, 204, 1332, 1349, 2308, 2666
BseMI	GCAATG	1 cut(s)	1631
BseNI	ACTGG	2 cut(s)	1376, 1822
BseRI	GAGGAG	1 cut(s)	2632
BseSI	GKGCMC	1 cut(s)	459
BseXI	GCAGC	7 cut(s)	263, 266, 269, 272, 1156, 1347, 2387
BseYI	CCCAGC	1 cut(s)	980
BshFI	GGCC	7 cut(s)	307, 968, 1303, 1816, 1821, 2327, 2670
BshNI	GGYRCC	1 cut(s)	361
BshVI	ATCGAT	1 cut(s)	2391
BsiHKAI	GWGCWC	1 cut(s)	459
BsiHKCI	CYCGRG	2 cut(s)	1089, 2366
BsiSI	CCGG	3 cut(s)	646, 2449, 2597
BslFI	GGGAC	8 cut(s)	360, 379, 836, 997, 1358, 1652, 2099, 2235
BslI	CCNNNNNNNGG	6 cut(s)	61, 204, 1332, 1349, 2308, 2666
BsmAI	GTCTC	4 cut(s)	168, 797, 1226, 1302
BsmBI	CGTCTC	1 cut(s)	797
BsmFI	GGGAC	8 cut(s)	360, 379, 836, 997, 1358, 1652, 2099, 2235
BsmI	GAATGC	1 cut(s)	2377
BsnI	GGCC	7 cut(s)	307, 968, 1303, 1816, 1821, 2327, 2670
Bso31I	GGTCTC	1 cut(s)	1226
BsoBI	CYCGRG	2 cut(s)	1089, 2366
Bsp1286I	GDGCHC	1 cut(s)	459
Bsp13I	TCCGGA	1 cut(s)	645
Bsp1720I	GCTNAGC	1 cut(s)	1892
Bsp19I	CCATGG	1 cut(s)	308
BspACI	CCGC	3 cut(s)	249, 2183, 2493
BspANI	GGCC	7 cut(s)	307, 968, 1303, 1816, 1821, 2327, 2670
BspDI	ATCGAT	1 cut(s)	2391
BspEI	TCCGGA	1 cut(s)	645
BspHI	TCATGA	2 cut(s)	333, 795
BspLI	GGNNCC	6 cut(s)	363, 761, 1100, 1419, 2299, 2564
BspMAI	CTGCAG	1 cut(s)	1365
BspMI	ACCTGC	2 cut(s)	52, 2574
BspOI	GCTAGC	1 cut(s)	1254
BspT107I	GGYRCC	1 cut(s)	361
BspTNI	GGTCTC	1 cut(s)	1226
BsrDI	GCAATG	1 cut(s)	1631
BsrI	ACTGG	2 cut(s)	1376, 1822
BssECI	CCNNGG	4 cut(s)	308, 615, 1039, 1102
BssNAI	GTATAC	1 cut(s)	584
BssNI	GRCGYC	2 cut(s)	1371, 1973
BssT1I	CCWWGG	2 cut(s)	308, 1102
Bst1107I	GTATAC	1 cut(s)	584
Bst2UI	CCWGG	3 cut(s)	1040, 1305, 1818
Bst4CI	ACNGT	6 cut(s)	220, 598, 1682, 2008, 2138, 2231
Bst6I	CTCTTC	5 cut(s)	41, 187, 890, 1273, 2337
BstACI	GRCGYC	2 cut(s)	1371, 1973
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstBAI	YACGTR	3 cut(s)	375, 435, 2206
BstC8I	GCNNGC	7 cut(s)	324, 459, 699, 1252, 2027, 2031, 2657
BstDSI	CCRYGG	2 cut(s)	308, 615
BstEII	GGTNACC	2 cut(s)	2008, 2124
BstENI	CCTNNNNNAGG	1 cut(s)	59
BstF5I	GGATG	8 cut(s)	187, 405, 625, 654, 1018, 1212, 1337, 1999
BstHHI	GCGC	2 cut(s)	1876, 2146
BstMAI	GTCTC	4 cut(s)	168, 797, 1226, 1302
BstMWI	GCNNNNNNNGC	6 cut(s)	257, 260, 944, 953, 1583, 1970
BstNI	CCWGG	3 cut(s)	1040, 1305, 1818
BstNSI	RCATGY	2 cut(s)	163, 2659
BstPAI	GACNNNNGTC	2 cut(s)	848, 1001
BstPI	GGTNACC	2 cut(s)	2008, 2124
BstSCI	CCNGG	3 cut(s)	1038, 1303, 1816
BstSFI	CTRYAG	1 cut(s)	1361
BstSLI	GKGCMC	1 cut(s)	459
BstSNI	TACGTA	2 cut(s)	375, 435
BstV1I	GCAGC	7 cut(s)	263, 266, 269, 272, 1156, 1347, 2387
BstV2I	GAAGAC	2 cut(s)	43, 2083
BstX2I	RGATCY	6 cut(s)	759, 857, 881, 1417, 2297, 2407
BstXI	CCANNNNNNTGG	3 cut(s)	958, 1299, 1529
BstYI	RGATCY	6 cut(s)	759, 857, 881, 1417, 2297, 2407
BstZ17I	GTATAC	1 cut(s)	584
Bsu15I	ATCGAT	1 cut(s)	2391
Bsu36I	CCTNAGG	1 cut(s)	2644
BsuI	GTATCC	2 cut(s)	2125, 2452
BsuRI	GGCC	7 cut(s)	307, 968, 1303, 1816, 1821, 2327, 2670
BsuTUI	ATCGAT	1 cut(s)	2391
BtgI	CCRYGG	2 cut(s)	308, 615
BtsCI	GGATG	8 cut(s)	187, 405, 625, 654, 1018, 1212, 1337, 1999
BtsI	GCAGTG	2 cut(s)	951, 1959
BtsIMutI	CAGTG	5 cut(s)	951, 1450, 1687, 1959, 2134
BveI	ACCTGC	2 cut(s)	52, 2574
Cac8I	GCNNGC	7 cut(s)	324, 459, 699, 1252, 2027, 2031, 2657
CciI	TCATGA	2 cut(s)	333, 795
CfoI	GCGC	2 cut(s)	1876, 2146
Cfr13I	GGNCC	7 cut(s)	305, 594, 1064, 1191, 1237, 1814, 2325
ClaI	ATCGAT	1 cut(s)	2391
CseI	GACGC	3 cut(s)	1090, 1360, 1962
Csp6I	GTAC	6 cut(s)	1322, 1698, 1927, 1937, 2198, 2239
CspCI	CAANNNNNGTGG	4 cut(s)	205, 240, 1893, 1928
CviAII	CATG	7 cut(s)	139, 160, 309, 334, 796, 2376, 2656
CviQI	GTAC	6 cut(s)	1322, 1698, 1927, 1937, 2198, 2239
DriI	GACNNNNNGTC	1 cut(s)	2631
EaeI	YGGCCR	3 cut(s)	966, 1819, 2668
Eam1104I	CTCTTC	5 cut(s)	41, 187, 890, 1273, 2337
Eam1105I	GACNNNNNGTC	1 cut(s)	2631
EarI	CTCTTC	5 cut(s)	41, 187, 890, 1273, 2337
Eco105I	TACGTA	2 cut(s)	375, 435
Eco130I	CCWWGG	2 cut(s)	308, 1102
Eco31I	GGTCTC	1 cut(s)	1226
Eco32I	GATATC	2 cut(s)	118, 2054
Eco47I	GGWCC	4 cut(s)	594, 1064, 1191, 1237
Eco57I	CTGAAG	1 cut(s)	2421
Eco81I	CCTNAGG	1 cut(s)	2644
Eco88I	CYCGRG	2 cut(s)	1089, 2366
Eco91I	GGTNACC	2 cut(s)	2008, 2124
EcoNI	CCTNNNNNAGG	1 cut(s)	59
EcoO65I	GGTNACC	2 cut(s)	2008, 2124
EcoRII	CCWGG	3 cut(s)	1038, 1303, 1816
EcoRV	GATATC	2 cut(s)	118, 2054
EcoT14I	CCWWGG	2 cut(s)	308, 1102
EcoT22I	ATGCAT	1 cut(s)	2377
ErhI	CCWWGG	2 cut(s)	308, 1102
Esp3I	CGTCTC	1 cut(s)	797
FaeI	CATG	7 cut(s)	142, 163, 312, 337, 799, 2379, 2659
FalI	AAGNNNNNCTT	2 cut(s)	1545, 1577
FaqI	GGGAC	8 cut(s)	360, 379, 836, 997, 1358, 1652, 2099, 2235
FatI	CATG	7 cut(s)	138, 159, 308, 333, 795, 2375, 2655
FauNDI	CATATG	1 cut(s)	940
FblI	GTMKAC	2 cut(s)	583, 1548
Fnu4HI	GCNGC	8 cut(s)	252, 255, 258, 261, 1145, 1361, 2401, 2493
FokI	GGATG	8 cut(s)	174, 392, 632, 661, 1025, 1219, 1344, 1986
Fsp4HI	GCNGC	8 cut(s)	252, 255, 258, 261, 1145, 1361, 2401, 2493
FspBI	CTAG	8 cut(s)	302, 666, 1046, 1251, 1413, 1965, 2106, 2306
GlaI	GCGC	2 cut(s)	1875, 2145
GluI	GCNGC	8 cut(s)	252, 255, 258, 261, 1145, 1361, 2401, 2493
GsaI	CCCAGC	1 cut(s)	984
GsuI	CTGGAG	3 cut(s)	1022, 1061, 1326
HaeIII	GGCC	7 cut(s)	307, 968, 1303, 1816, 1821, 2327, 2670
HapII	CCGG	3 cut(s)	646, 2449, 2597
HgaI	GACGC	3 cut(s)	1090, 1360, 1962
HhaI	GCGC	2 cut(s)	1876, 2146
Hin1I	GRCGYC	2 cut(s)	1371, 1973
Hin1II	CATG	7 cut(s)	142, 163, 312, 337, 799, 2379, 2659
Hin6I	GCGC	2 cut(s)	1874, 2144
HinP1I	GCGC	2 cut(s)	1874, 2144
HincII	GTYRAC	3 cut(s)	226, 517, 1947
HindII	GTYRAC	3 cut(s)	226, 517, 1947
HpaI	GTTAAC	1 cut(s)	1947
HpaII	CCGG	3 cut(s)	646, 2449, 2597
HphI	GGTGA	5 cut(s)	757, 1127, 1417, 2118, 2407
Hpy166II	GTNNAC	9 cut(s)	226, 457, 517, 584, 682, 1237, 1549, 1947, 2692
Hpy188I	TCNGA	9 cut(s)	68, 122, 172, 273, 913, 1033, 1289, 1953, 2101
Hpy8I	GTNNAC	9 cut(s)	226, 457, 517, 584, 682, 1237, 1549, 1947, 2692
Hpy99I	CGWCG	1 cut(s)	1978
HpyAV	CCTTC	8 cut(s)	527, 1182, 2006, 2162, 2445, 2455, 2536, 2669
HpyCH4III	ACNGT	6 cut(s)	220, 598, 1682, 2008, 2138, 2231
HpyCH4IV	ACGT	7 cut(s)	374, 434, 576, 921, 1026, 1233, 2205
HpyF10VI	GCNNNNNNNGC	6 cut(s)	257, 260, 944, 953, 1583, 1970
HpySE526I	ACGT	7 cut(s)	374, 434, 576, 921, 1026, 1233, 2205
Hsp92I	GRCGYC	2 cut(s)	1371, 1973
Hsp92II	CATG	7 cut(s)	142, 163, 312, 337, 799, 2379, 2659
HspAI	GCGC	2 cut(s)	1874, 2144
Kpn2I	TCCGGA	1 cut(s)	645
KspAI	GTTAAC	1 cut(s)	1947
LmnI	GCTCC	2 cut(s)	2645, 2678
Lsp1109I	GCAGC	7 cut(s)	263, 266, 269, 272, 1156, 1347, 2387
LweI	GCATC	9 cut(s)	48, 309, 934, 1003, 1464, 1528, 1564, 1701, 2131
MaeI	CTAG	8 cut(s)	302, 666, 1046, 1251, 1413, 1965, 2106, 2306
MaeII	ACGT	7 cut(s)	374, 434, 576, 921, 1026, 1233, 2205
MaeIII	GTNAC	9 cut(s)	211, 244, 370, 561, 1955, 2008, 2124, 2231, 2623
MflI	RGATCY	6 cut(s)	759, 857, 881, 1417, 2297, 2407
MhlI	GDGCHC	1 cut(s)	459
MlsI	TGGCCA	3 cut(s)	968, 1821, 2670
MluNI	TGGCCA	3 cut(s)	968, 1821, 2670
MlyI	GAGTC	6 cut(s)	221, 649, 1278, 2073, 2081, 2354
MmeI	TCCRAC	5 cut(s)	46, 159, 470, 2027, 2029
Mox20I	TGGCCA	3 cut(s)	968, 1821, 2670
Mph1103I	ATGCAT	1 cut(s)	2377
MroI	TCCGGA	1 cut(s)	645
MroXI	GAANNNNTTC	1 cut(s)	899
MscI	TGGCCA	3 cut(s)	968, 1821, 2670
MseI	TTAA	9 cut(s)	465, 573, 1167, 1227, 1380, 1674, 1946, 2189, 2704
MslI	CAYNNNNRTG	1 cut(s)	2139
Msp20I	TGGCCA	3 cut(s)	968, 1821, 2670
MspI	CCGG	3 cut(s)	646, 2449, 2597
MspR9I	CCNGG	3 cut(s)	1040, 1305, 1818
Mva1269I	GAATGC	1 cut(s)	2377
MvaI	CCWGG	3 cut(s)	1040, 1305, 1818
MwoI	GCNNNNNNNGC	6 cut(s)	257, 260, 944, 953, 1583, 1970
NcoI	CCATGG	1 cut(s)	308
NdeI	CATATG	1 cut(s)	940
NheI	GCTAGC	1 cut(s)	1250
NlaIII	CATG	7 cut(s)	142, 163, 312, 337, 799, 2379, 2659
NlaIV	GGNNCC	6 cut(s)	363, 761, 1100, 1419, 2299, 2564
NmeAIII	GCCGAG	1 cut(s)	1902
NmuCI	GTSAC	2 cut(s)	2124, 2623
NsiI	ATGCAT	1 cut(s)	2377
NspI	RCATGY	2 cut(s)	163, 2659
PaeI	GCATGC	1 cut(s)	2659
PaeR7I	CTCGAG	2 cut(s)	1089, 2366
PagI	TCATGA	2 cut(s)	333, 795
PciI	ACATGT	1 cut(s)	159
PctI	GAATGC	1 cut(s)	2377
PdmI	GAANNNNTTC	1 cut(s)	899
PfeI	GAWTC	8 cut(s)	105, 298, 443, 900, 1200, 1449, 1486, 2042
PflMI	CCANNNNNTGG	2 cut(s)	1332, 2666
PkrI	GCNGC	8 cut(s)	253, 256, 259, 262, 1146, 1362, 2402, 2494
PleI	GAGTC	6 cut(s)	221, 649, 1278, 2073, 2081, 2353
PpsI	GAGTC	6 cut(s)	221, 649, 1278, 2073, 2081, 2353
Ppu21I	YACGTR	3 cut(s)	375, 435, 2206
PscI	ACATGT	1 cut(s)	159
PshAI	GACNNNNGTC	2 cut(s)	848, 1001
Psp1406I	AACGTT	1 cut(s)	576
Psp6I	CCWGG	3 cut(s)	1038, 1303, 1816
PspEI	GGTNACC	2 cut(s)	2008, 2124
PspFI	CCCAGC	1 cut(s)	980
PspGI	CCWGG	3 cut(s)	1038, 1303, 1816
PspN4I	GGNNCC	6 cut(s)	363, 761, 1100, 1419, 2299, 2564
PspPI	GGNCC	7 cut(s)	305, 594, 1064, 1191, 1237, 1814, 2325
PstI	CTGCAG	1 cut(s)	1365
PsuI	RGATCY	6 cut(s)	759, 857, 881, 1417, 2297, 2407
RsaI	GTAC	6 cut(s)	1323, 1699, 1928, 1938, 2199, 2240
RsaNI	GTAC	6 cut(s)	1322, 1698, 1927, 1937, 2198, 2239
RseI	CAYNNNNRTG	1 cut(s)	2139
SaqAI	TTAA	9 cut(s)	465, 573, 1167, 1227, 1380, 1674, 1946, 2189, 2704
SatI	GCNGC	8 cut(s)	252, 255, 258, 261, 1145, 1361, 2401, 2493
Sau96I	GGNCC	7 cut(s)	305, 594, 1064, 1191, 1237, 1814, 2325
ScaI	AGTACT	1 cut(s)	1938
SchI	GAGTC	6 cut(s)	221, 649, 1278, 2073, 2081, 2354
ScrFI	CCNGG	3 cut(s)	1040, 1305, 1818
SduI	GDGCHC	1 cut(s)	459
SfaNI	GCATC	9 cut(s)	48, 309, 934, 1003, 1464, 1528, 1564, 1701, 2131
SfcI	CTRYAG	1 cut(s)	1361
Sfr274I	CTCGAG	2 cut(s)	1089, 2366
SinI	GGWCC	4 cut(s)	594, 1064, 1191, 1237
SlaI	CTCGAG	2 cut(s)	1089, 2366
SmiMI	CAYNNNNRTG	1 cut(s)	2139
SmlI	CTYRAG	4 cut(s)	450, 703, 1089, 2366
SmoI	CTYRAG	4 cut(s)	450, 703, 1089, 2366
SnaBI	TACGTA	2 cut(s)	375, 435
SphI	GCATGC	1 cut(s)	2659
SsiI	CCGC	3 cut(s)	249, 2183, 2493
SspMI	CTAG	8 cut(s)	302, 666, 1046, 1251, 1413, 1965, 2106, 2306
StyD4I	CCNGG	3 cut(s)	1038, 1303, 1816
StyI	CCWWGG	2 cut(s)	308, 1102
TaaI	ACNGT	6 cut(s)	220, 598, 1682, 2008, 2138, 2231
TaiI	ACGT	7 cut(s)	377, 437, 579, 924, 1029, 1236, 2208
TatI	WGTACW	2 cut(s)	1936, 2238
TauI	GCSGC	1 cut(s)	2495
TfiI	GAWTC	8 cut(s)	105, 298, 443, 900, 1200, 1449, 1486, 2042
Tru1I	TTAA	9 cut(s)	465, 573, 1167, 1227, 1380, 1674, 1946, 2189, 2704
Tru9I	TTAA	9 cut(s)	465, 573, 1167, 1227, 1380, 1674, 1946, 2189, 2704
TscAI	CASTG	5 cut(s)	958, 1450, 1687, 1966, 2141
TseFI	GTSAC	2 cut(s)	2124, 2623
TseI	GCWGC	7 cut(s)	251, 254, 257, 260, 1144, 1360, 2400
Tsp45I	GTSAC	2 cut(s)	2124, 2623
TspGWI	ACGGA	7 cut(s)	381, 398, 632, 740, 821, 1309, 2247
TspRI	CASTG	5 cut(s)	958, 1450, 1687, 1966, 2141
Van91I	CCANNNNNTGG	2 cut(s)	1332, 2666
VneI	GTGCAC	1 cut(s)	455
VpaK11BI	GGWCC	4 cut(s)	594, 1064, 1191, 1237
XagI	CCTNNNNNAGG	1 cut(s)	59
XapI	RAATTY	3 cut(s)	991, 2211, 2522
XceI	RCATGY	2 cut(s)	163, 2659
XcmI	CCANNNNNNNNNTGG	6 cut(s)	97, 955, 1109, 1130, 1559, 2335
XhoI	CTCGAG	2 cut(s)	1089, 2366
XmiI	GTMKAC	2 cut(s)	583, 1548
XmnI	GAANNNNTTC	1 cut(s)	899
XspI	CTAG	8 cut(s)	302, 666, 1046, 1251, 1413, 1965, 2106, 2306
ZrmI	AGTACT	1 cut(s)	1938
Zsp2I	ATGCAT	1 cut(s)	2377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.