Rh6DG499400

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
65624840 .. 65629618
4779 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG499400.1

Sequence Viewer

Length: 2385 bp
ATGGCAACTGATAAACAAATAGATGCAGAGCTTGACGAGTTGATGAAAATGCCAACCAGGGTCTTCATAGTGCACATGTTGCCTTCTCTTGCCTCTCGACTTTTTTCTAGGGCAAATGCAATGGGAATGATGGAAAAAGGCTTTGCTTGGATAGTGACAAATGACATGACTAGCTTCTTTAGTTCCTCAAATTATTCTGTCATAGATAACATGCAAGGGGTGTTGGGTTTAAAGACTTACGTTCCAAATACGGAGCAGCTTGAAAATTTTAGAGGTAGATGGCAAAGGAAATTCCAACAAGACAATCCAACTCTCCTCAATGTTAAATTGGATGTTTTCGGACTGTGGGCTTATGATGCGGCTTGGGCACTAGCCACGGCAGTTGAGAAGGTACAGAGTACAAACTTCTCTTCCCGCAAGATGAACATTTCTGGTAGTTCCACTGGTTTAGAAAGATTGGAGATCTCTCAGAGTGGTCCTGAACTTGTCCGAGAACTATCGGCTACGAGATTTACTGGACTTTCAGGAGATTTCAGTCTTATTAATGGACAACTACAATCATCAACTTTTCAGGTAGTTAATGTGAACGATAATGGGGAAAGAGGGGTTGGATATTGGACACCCCAGAAGGGACTTGTAAGAAACTTAAACTCAAAAAACACAAGCAGGTATGCTACTTCCAATGCCAGTCTTGGAACTATCATATGGCCTGGAGACACGACCTCAATTCCGCAGGGTTGGCAGATTCCTATGAGTGGGATAAAACTAAAAGTTCTAGTCCCAGTGAAGAATAGTTTCAAAGAATTTGTAAATGTATCATATGATCATAGCACTAACACAAGTAATGCCACTGGATACTGCATTGACGTCTTTAAAGCTGTAATAGAATCATTACCATACCCTGTCCCTTACGAGTTTTATCCCTTTGAAAACTCTCACCATCAGAGTGCTGGTACTTATAATGATTTGCTTGATCAAGTGTTTCTTGGGAACTATGATGCAGCAGTTGGTGATATTACCATTAGAGCAAATAGATCCTTGTATGTCGACTTCACATTGCCATACACAGAATCTGGGATATCAATGATCGTGCCTATCAAGGATAAAAGTGATGCTAAAAGCACATGGGTGTTTTTGAAGCCTTTGACTTGGGACCTTTGGGTAGCAATCGGTTGTTTTTTCATATTCATTGGTTTTGTAGTCTGGGTTCTTGAACACAGGATAAATAAAGACTTCCGAGGGCCTCCACTTCATCAAATTGGCACAAGCTTTTGGTTCTCATTCTCAACCATGGTTTTTGCACAAAGGGAGAGAGTACGGACCAACTTGGCTCGGTTTGTTGTGATAGTATGGTGCTTTGTTGTTCTCATACTAACTCAAAGTTATACTGCGAGTTTTAGTTCAATTTTAACAGTTCAACAGCTTCAACCCGTCATTACTGATGTAAACATGCTATTGAAAAACGGGGACAATGTTGGCTATCAGGCAGGTTCTTTTATTTATTGGATATTAAAGGAAACAGGATTTCAAGAGGCAAACCTTTGGACATACGAGTCTCCAGAAGAATTGAATGAACTCCTTCAAAATGGGAATGAAAAACATGGTATTTCGGCTGCTTTTGATGAAACCCCATACATGAAACTTTTTCTTGCAATTTATTGTTCAAAATACACCATGGTTGAGCCAACATTTAAAGCTGATGGTTTTGCCTTTGTCTTTCAAAAAGGCTCAATTCTCACGCGTGATGTTTCAAGAGAAATCACTAGTGTGCATGAGGGAACTGAAATGGAGAAAATCGAGAACAAGTGGTTCAAGAATAAAGCAACTTGTTCAGACTCCAGCACCACAAGTTCTTCCAACAGTCTTACTCTTAGCCTTGATAGCTTTCGGGGCCTCTTCATTGTTGCTGGGGTTGCTTCATCATTAGCTCTTCTCATATGTGCAGCCATGTTCTTCCATGAACACAGGCGCACTTTGAGAAGCTTTGATCCAGAAGCATCATTTTGGAGTAGAATTCGTGTCCTATTAAGGTTATATGACCAAAGGGACCCCAATTGGGATACTTATAACGGAAGACAGCTGCAAGATTCAGTTCATGGTATAATAGGCGCGGTTGAACCCTCACCGAGCACCAACTCTCCCCCAAGGCCATCAAGCACAAACACGGAATCACACATTGTTATTGAAGAGCTGGGAACGCCTCCAGCTGACACTGAGCTTGGTGACTTGAATGAGTTGAATCCCAATGGTCAAGCAACCCAAGAGATTGAAAATGCACTTGAGTCAACTTCCCAAAGGGAAGAGAGTCTTCCACTTCTTTGTGAAATGAAACTTGGTAGTGATGTCCCTAGAGAATATGGGAGCAATTTTCTAATTGATCAGTAA

Protein Analysis

794

Amino Acids

89.31

Weight (kDa)

5.29

Isoelectric Point (pI)

35.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 4 - 197 6.8e-34 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 269 - 365 1.7e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 278 - 605 5.5e-10 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 383 - 639 4.4e-38 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 960, 2067
AasI GACNNNNNNGTC 1 cut(s) 1552
AatII GACGTC 1 cut(s) 870
Acc36I ACCTGC 2 cut(s) 657, 1478
AccI GTMKAC 1 cut(s) 1047
AccII CGCG 2 cut(s) 1741, 2111
AciI CCGC 4 cut(s) 359, 415, 731, 2111
AclWI GGATC 2 cut(s) 1029, 1982
AcsI RAATTY 4 cut(s) 265, 290, 803, 2013
AcyI GRCGYC 1 cut(s) 867
AfaI GTAC 4 cut(s) 393, 400, 955, 1317
AfiI CCNNNNNNNGG 3 cut(s) 629, 755, 2056
AflIII ACRYGT 2 cut(s) 75, 1739
AhlI ACTAGT 1 cut(s) 1763
AjnI CCWGG 2 cut(s) 56, 709
AjuI GAANNNNNNNTTGG 4 cut(s) 591, 623, 2316, 2348
AleI CACNNNNGTG 2 cut(s) 1127, 1766
Alw21I GWGCWC 2 cut(s) 75, 2132
Alw26I GTCTC 2 cut(s) 708, 1560
Alw44I GTGCAC 1 cut(s) 71
AlwI GGATC 2 cut(s) 1029, 1982
AlwNI CAGNNNCTG 1 cut(s) 1073
AoxI GGCC 4 cut(s) 707, 1241, 1891, 2147
ApaLI GTGCAC 1 cut(s) 71
ApeKI GCWGC 5 cut(s) 256, 1001, 1613, 1943, 2080
ApoI RAATTY 4 cut(s) 265, 290, 803, 2013
AseI ATTAAT 1 cut(s) 543
Asp700I GAANNNNTTC 2 cut(s) 794, 1578
AspLEI GCGC 2 cut(s) 1971, 2111
AspS9I GGNCC 6 cut(s) 476, 1153, 1241, 1320, 1891, 2047
AsuHPI GGTGA 4 cut(s) 929, 1022, 2115, 2234
AvaII GGWCC 4 cut(s) 476, 1153, 1320, 2047
BaeGI GKGCMC 2 cut(s) 75, 370
BarI GAAGNNNNNNTAC 2 cut(s) 1034, 1066
BbsI GAAGAC 3 cut(s) 55, 2080, 2300
Bbv12I GWGCWC 2 cut(s) 75, 2132
BbvI GCAGC 5 cut(s) 268, 1013, 1600, 1955, 2067
BccI CCATC 5 cut(s) 124, 273, 948, 1694, 2158
BceAI ACGGC 1 cut(s) 393
BciT130I CCWGG 2 cut(s) 58, 711
BciVI GTATCC 2 cut(s) 848, 2053
BclI TGATCA 3 cut(s) 823, 973, 2377
BcoDI GTCTC 2 cut(s) 708, 1560
BcuI ACTAGT 1 cut(s) 1763
BfaI CTAG 6 cut(s) 108, 171, 371, 776, 1764, 2349
BfuAI ACCTGC 2 cut(s) 657, 1478
BfuI GTATCC 2 cut(s) 848, 2053
BglII AGATCT 1 cut(s) 462
BisI GCNGC 6 cut(s) 257, 360, 1002, 1614, 1944, 2081
BlsI GCNGC 6 cut(s) 258, 361, 1003, 1615, 1945, 2082
Bme1390I CCNGG 2 cut(s) 58, 711
Bme18I GGWCC 4 cut(s) 476, 1153, 1320, 2047
BmgT120I GGNCC 6 cut(s) 476, 1153, 1241, 1320, 1891, 2047
BmiI GGNNCC 4 cut(s) 1154, 1892, 2048, 2049
BmrFI CCNGG 2 cut(s) 58, 711
BmrI ACTGGG 1 cut(s) 776
BmsI GCATC 5 cut(s) 13, 346, 988, 1102, 2006
BmuI ACTGGG 1 cut(s) 776
BpiI GAAGAC 3 cut(s) 55, 2080, 2300
BpmI CTGGAG 4 cut(s) 732, 1542, 1822, 2187
BpuEI CTTGAG 1 cut(s) 2300
BsaHI GRCGYC 1 cut(s) 867
BsaJI CCNNGG 6 cut(s) 57, 375, 1237, 1290, 1674, 2144
BsaXI ACNNNNNCTCC 2 cut(s) 2122, 2152
Bsc4I CCNNNNNNNGG 3 cut(s) 629, 755, 2056
Bse1I ACTGG 5 cut(s) 448, 520, 687, 782, 856
Bse3DI GCAATG 2 cut(s) 126, 1055
BseBI CCWGG 2 cut(s) 58, 711
BseDI CCNNGG 6 cut(s) 57, 375, 1237, 1290, 1674, 2144
BseGI GGATG 1 cut(s) 337
BseLI CCNNNNNNNGG 3 cut(s) 629, 755, 2056
BseMI GCAATG 2 cut(s) 126, 1055
BseMII CTCAG 2 cut(s) 482, 2205
BseNI ACTGG 5 cut(s) 448, 520, 687, 782, 856
BseRI GAGGAG 1 cut(s) 305
BseSI GKGCMC 2 cut(s) 75, 370
BseXI GCAGC 5 cut(s) 268, 1013, 1600, 1955, 2067
BseYI CCCAGC 2 cut(s) 1907, 2191
BsgI GTGCAG 1 cut(s) 1962
Bsh1236I CGCG 2 cut(s) 1741, 2111
BshFI GGCC 4 cut(s) 709, 1243, 1893, 2149
BsiHKAI GWGCWC 2 cut(s) 75, 2132
BslFI GGGAC 7 cut(s) 645, 764, 890, 1166, 1481, 2060, 2330
BslI CCNNNNNNNGG 3 cut(s) 629, 755, 2056
BsmAI GTCTC 2 cut(s) 708, 1560
BsmFI GGGAC 7 cut(s) 645, 764, 890, 1166, 1481, 2060, 2330
BsnI GGCC 4 cut(s) 709, 1243, 1893, 2149
Bsp1286I GDGCHC 3 cut(s) 75, 370, 2132
Bsp143I GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
Bsp19I CCATGG 2 cut(s) 1290, 1674
BspACI CCGC 4 cut(s) 359, 415, 731, 2111
BspANI GGCC 4 cut(s) 709, 1243, 1893, 2149
BspCNI CTCAG 2 cut(s) 481, 2206
BspFNI CGCG 2 cut(s) 1741, 2111
BspLI GGNNCC 4 cut(s) 1154, 1892, 2048, 2049
BspMI ACCTGC 2 cut(s) 657, 1478
BspPI GGATC 2 cut(s) 1029, 1982
BspQI GCTCTTC 2 cut(s) 1935, 2181
BsrDI GCAATG 2 cut(s) 126, 1055
BsrI ACTGG 5 cut(s) 448, 520, 687, 782, 856
BssECI CCNNGG 6 cut(s) 57, 375, 1237, 1290, 1674, 2144
BssMI GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
BssNI GRCGYC 1 cut(s) 867
BssT1I CCWWGG 3 cut(s) 1290, 1674, 2144
Bst2UI CCWGG 2 cut(s) 58, 711
Bst4CI ACNGT 3 cut(s) 345, 1414, 1862
Bst6I CTCTTC 5 cut(s) 415, 1901, 1935, 2181, 2295
BstACI GRCGYC 1 cut(s) 867
BstAPI GCANNNNNTGC 1 cut(s) 79
BstDEI CTNAG 3 cut(s) 468, 1871, 2214
BstDSI CCRYGG 3 cut(s) 375, 1290, 1674
BstF5I GGATG 1 cut(s) 337
BstFNI CGCG 2 cut(s) 1741, 2111
BstHHI GCGC 2 cut(s) 1971, 2111
BstKTI GATC 7 cut(s) 465, 826, 976, 1037, 1089, 1990, 2380
BstMAI GTCTC 2 cut(s) 708, 1560
BstMBI GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
BstMWI GCNNNNNNNGC 8 cut(s) 79, 356, 365, 739, 1881, 1890, 1913, 2197
BstNI CCWGG 2 cut(s) 58, 711
BstNSI RCATGY 3 cut(s) 79, 214, 1453
BstSCI CCNGG 2 cut(s) 56, 709
BstSLI GKGCMC 2 cut(s) 75, 370
BstUI CGCG 2 cut(s) 1741, 2111
BstV1I GCAGC 5 cut(s) 268, 1013, 1600, 1955, 2067
BstV2I GAAGAC 3 cut(s) 55, 2080, 2300
BstX2I RGATCY 2 cut(s) 462, 1034
BstYI RGATCY 2 cut(s) 462, 1034
BsuI GTATCC 2 cut(s) 848, 2053
BsuRI GGCC 4 cut(s) 709, 1243, 1893, 2149
BtgI CCRYGG 3 cut(s) 375, 1290, 1674
BtsCI GGATG 1 cut(s) 337
BtsIMutI CAGTG 4 cut(s) 441, 789, 849, 2211
BveI ACCTGC 2 cut(s) 657, 1478
CaiI CAGNNNCTG 1 cut(s) 1073
CfoI GCGC 2 cut(s) 1971, 2111
Cfr13I GGNCC 6 cut(s) 476, 1153, 1241, 1320, 1891, 2047
Csp6I GTAC 4 cut(s) 392, 399, 954, 1316
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviQI GTAC 4 cut(s) 392, 399, 954, 1316
DdeI CTNAG 3 cut(s) 468, 1871, 2214
DpnI GATC 7 cut(s) 464, 825, 975, 1036, 1088, 1989, 2379
DpnII GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
DraI TTTAAA 3 cut(s) 231, 874, 1693
DrdI GACNNNNNNGTC 1 cut(s) 1552
DseDI GACNNNNNNGTC 1 cut(s) 1552
Eam1104I CTCTTC 5 cut(s) 415, 1901, 1935, 2181, 2295
EarI CTCTTC 5 cut(s) 415, 1901, 1935, 2181, 2295
Eco130I CCWWGG 3 cut(s) 1290, 1674, 2144
Eco32I GATATC 1 cut(s) 1080
Eco47I GGWCC 4 cut(s) 476, 1153, 1320, 2047
EcoO109I RGGNCCY 4 cut(s) 1153, 1241, 1891, 2047
EcoRI GAATTC 1 cut(s) 2013
EcoRII CCWGG 2 cut(s) 56, 709
EcoRV GATATC 1 cut(s) 1080
EcoT14I CCWWGG 3 cut(s) 1290, 1674, 2144
ErhI CCWWGG 3 cut(s) 1290, 1674, 2144
FalI AAGNNNNNCTT 4 cut(s) 969, 1001, 2292, 2324
FaqI GGGAC 7 cut(s) 645, 764, 890, 1166, 1481, 2060, 2330
FauI CCCGC 1 cut(s) 422
FauNDI CATATG 3 cut(s) 704, 820, 1937
FbaI TGATCA 3 cut(s) 823, 973, 2377
FblI GTMKAC 1 cut(s) 1047
Fnu4HI GCNGC 6 cut(s) 257, 360, 1002, 1614, 1944, 2081
FokI GGATG 1 cut(s) 344
Fsp4HI GCNGC 6 cut(s) 257, 360, 1002, 1614, 1944, 2081
FspBI CTAG 6 cut(s) 108, 171, 371, 776, 1764, 2349
GlaI GCGC 2 cut(s) 1970, 2110
GluI GCNGC 6 cut(s) 257, 360, 1002, 1614, 1944, 2081
GsaI CCCAGC 2 cut(s) 1911, 2195
GsuI CTGGAG 4 cut(s) 732, 1542, 1822, 2187
HaeIII GGCC 4 cut(s) 709, 1243, 1893, 2149
HhaI GCGC 2 cut(s) 1971, 2111
Hin1I GRCGYC 1 cut(s) 867
Hin6I GCGC 2 cut(s) 1969, 2109
HinP1I GCGC 2 cut(s) 1969, 2109
HincII GTYRAC 2 cut(s) 1048, 2286
HindII GTYRAC 2 cut(s) 1048, 2286
HindIII AAGCTT 2 cut(s) 1267, 1981
HphI GGTGA 4 cut(s) 929, 1022, 2115, 2234
Hpy166II GTNNAC 5 cut(s) 73, 586, 1048, 1447, 2286
Hpy188I TCNGA 6 cut(s) 341, 471, 491, 945, 1238, 1834
Hpy8I GTNNAC 5 cut(s) 73, 586, 1048, 1447, 2286
HpyAV CCTTC 4 cut(s) 93, 382, 622, 1589
HpyCH4III ACNGT 3 cut(s) 345, 1414, 1862
HpyCH4IV ACGT 2 cut(s) 240, 867
HpyF10VI GCNNNNNNNGC 8 cut(s) 79, 356, 365, 739, 1881, 1890, 1913, 2197
HpyF3I CTNAG 3 cut(s) 468, 1871, 2214
HpySE526I ACGT 2 cut(s) 240, 867
Hsp92I GRCGYC 1 cut(s) 867
HspAI GCGC 2 cut(s) 1969, 2109
KflI GGGWCCC 1 cut(s) 2047
Ksp22I TGATCA 3 cut(s) 823, 973, 2377
Kzo9I GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
LguI GCTCTTC 2 cut(s) 1935, 2181
LmnI GCTCC 2 cut(s) 253, 2361
Lsp1109I GCAGC 5 cut(s) 268, 1013, 1600, 1955, 2067
LweI GCATC 5 cut(s) 13, 346, 988, 1102, 2006
MaeI CTAG 6 cut(s) 108, 171, 371, 776, 1764, 2349
MaeII ACGT 2 cut(s) 240, 867
MaeIII GTNAC 2 cut(s) 154, 2222
MalI GATC 7 cut(s) 464, 825, 975, 1036, 1088, 1989, 2379
MboI GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
MfeI CAATTG 1 cut(s) 2053
MflI RGATCY 2 cut(s) 462, 1034
MhlI GDGCHC 3 cut(s) 75, 370, 2132
MluI ACGCGT 1 cut(s) 1739
MlyI GAGTC 4 cut(s) 1562, 1829, 2291, 2314
MmeI TCCRAC 4 cut(s) 319, 332, 589, 1881
MroXI GAANNNNTTC 2 cut(s) 794, 1578
MslI CAYNNNNRTG 3 cut(s) 945, 1127, 1766
MspA1I CMGCKG 2 cut(s) 2080, 2207
MspR9I CCNGG 2 cut(s) 58, 711
MunI CAATTG 1 cut(s) 2053
MvaI CCWGG 2 cut(s) 58, 711
MvnI CGCG 2 cut(s) 1741, 2111
MwoI GCNNNNNNNGC 8 cut(s) 79, 356, 365, 739, 1881, 1890, 1913, 2197
NcoI CCATGG 2 cut(s) 1290, 1674
NdeI CATATG 3 cut(s) 704, 820, 1937
NdeII GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
NlaIV GGNNCC 4 cut(s) 1154, 1892, 2048, 2049
NmuCI GTSAC 2 cut(s) 154, 2222
NspI RCATGY 3 cut(s) 79, 214, 1453
OliI CACNNNNGTG 2 cut(s) 1127, 1766
PciI ACATGT 1 cut(s) 75
PciSI GCTCTTC 2 cut(s) 1935, 2181
PdmI GAANNNNTTC 2 cut(s) 794, 1578
PfeI GAWTC 6 cut(s) 745, 887, 1070, 2087, 2168, 2239
PkrI GCNGC 6 cut(s) 258, 361, 1003, 1615, 1945, 2082
PleI GAGTC 4 cut(s) 1561, 1829, 2290, 2313
PpsI GAGTC 4 cut(s) 1561, 1829, 2290, 2313
PpuMI RGGWCCY 2 cut(s) 1153, 2047
PscI ACATGT 1 cut(s) 75
PshBI ATTAAT 1 cut(s) 543
PsiI TTATAA 2 cut(s) 960, 2067
Psp5II RGGWCCY 2 cut(s) 1153, 2047
Psp6I CCWGG 2 cut(s) 56, 709
PspFI CCCAGC 2 cut(s) 1907, 2191
PspGI CCWGG 2 cut(s) 56, 709
PspN4I GGNNCC 4 cut(s) 1154, 1892, 2048, 2049
PspPI GGNCC 6 cut(s) 476, 1153, 1241, 1320, 1891, 2047
PspPPI RGGWCCY 2 cut(s) 1153, 2047
PsrI GAACNNNNNNTAC 2 cut(s) 1191, 1223
PstNI CAGNNNCTG 1 cut(s) 1073
PsuI RGATCY 2 cut(s) 462, 1034
PvuII CAGCTG 2 cut(s) 2080, 2207
RsaI GTAC 4 cut(s) 393, 400, 955, 1317
RsaNI GTAC 4 cut(s) 392, 399, 954, 1316
RseI CAYNNNNRTG 3 cut(s) 945, 1127, 1766
SalI GTCGAC 1 cut(s) 1046
SapI GCTCTTC 2 cut(s) 1935, 2181
SatI GCNGC 6 cut(s) 257, 360, 1002, 1614, 1944, 2081
Sau3AI GATC 7 cut(s) 462, 823, 973, 1034, 1086, 1987, 2377
Sau96I GGNCC 6 cut(s) 476, 1153, 1241, 1320, 1891, 2047
SchI GAGTC 4 cut(s) 1562, 1829, 2291, 2314
ScrFI CCNGG 2 cut(s) 58, 711
SduI GDGCHC 3 cut(s) 75, 370, 2132
SfaNI GCATC 5 cut(s) 13, 346, 988, 1102, 2006
SinI GGWCC 4 cut(s) 476, 1153, 1320, 2047
SmiMI CAYNNNNRTG 3 cut(s) 945, 1127, 1766
SmlI CTYRAG 1 cut(s) 2279
SmoI CTYRAG 1 cut(s) 2279
SpeI ACTAGT 1 cut(s) 1763
SsiI CCGC 4 cut(s) 359, 415, 731, 2111
SspMI CTAG 6 cut(s) 108, 171, 371, 776, 1764, 2349
StyD4I CCNGG 2 cut(s) 56, 709
StyI CCWWGG 3 cut(s) 1290, 1674, 2144
TaaI ACNGT 3 cut(s) 345, 1414, 1862
TaiI ACGT 2 cut(s) 243, 870
TaqI TCGA 3 cut(s) 97, 1047, 1797
TatI WGTACW 1 cut(s) 398
TauI GCSGC 1 cut(s) 362
TfiI GAWTC 6 cut(s) 745, 887, 1070, 2087, 2168, 2239
TscAI CASTG 4 cut(s) 448, 789, 856, 2218
TseFI GTSAC 2 cut(s) 154, 2222
TseI GCWGC 5 cut(s) 256, 1001, 1613, 1943, 2080
Tsp45I GTSAC 2 cut(s) 154, 2222
TspGWI ACGGA 4 cut(s) 266, 1333, 2085, 2180
TspRI CASTG 4 cut(s) 448, 789, 856, 2218
VneI GTGCAC 1 cut(s) 71
VpaK11BI GGWCC 4 cut(s) 476, 1153, 1320, 2047
VspI ATTAAT 1 cut(s) 543
XapI RAATTY 4 cut(s) 265, 290, 803, 2013
XceI RCATGY 3 cut(s) 79, 214, 1453
XcmI CCANNNNNNNNNTGG 1 cut(s) 947
XmiI GTMKAC 1 cut(s) 1047
XmnI GAANNNNTTC 2 cut(s) 794, 1578
XspI CTAG 6 cut(s) 108, 171, 371, 776, 1764, 2349
ZraI GACGTC 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.