Rw6G014570

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
26914816 .. 26918738
3923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G014570.1

Sequence Viewer

Length: 2895 bp
ATGCTCAAGAAACCCCGCAATCTTGTTCTTTCTGTCTTTTTTCTGTTTCTTTCTTCATGGATTTGCTTGGCCATGGCACAAAACAAAACCACTACTACAATACCAGTGAATGTGGGTGTTGTTCTTGATATAAATCAGGACTATGGGAAGATTTGGTTGAGTTGCATCAAACTGGCGCTCTCAGACTTCTATGCATCTCATGCTCACTATAAAACAAGGCTGGTCTTGAACATTAGGGACTCCGAGAACAACGTTGTACGAGCAGCTGATGCAGCTCTAGATTTGATAAAGAATACACAAGTGGAAGCCATTTTAGGACCCGTGACATCTATGGATGCGAGCTTTGTTATTAATCTGGGCGACCAAGCTCAAGTGCCAATTATTTCATTTTCTGCATCAAGCCCATCTCTTACTTCACTCCGCAGCTCCTACTTTTTCCAAATTACACAGGTTGACTCATCCCAGGTGAATGCCATAAGTGCTATCGTTCACAATTTTGGATGGAGACAAGTTGTAGCCATCTATGTAGACACAGAATACGGGGAAGGAGTCATACCTTTTCTAACTGATGCATTGCAAGAGGTTGATGTTCGTGTCACCTATCGAAGTGCAATTTCCTCATTAGCCACCGATGATCAAATTCTTCAAGAACTATACAAGTTAATGACCATGCAAACTAGAGTCTTCATTGTGCATATGAATCCGAATCTAGGTTCTAGGCTCTTTGCCAAGGCAAAAGAGATTGGAATGATGAGTCAAGGATATGTCTGGATCATGACTAATGGGTTAGCCAATCGGTTAACATCGATGAATTCTACAGTCATAAATTCCATGCAAGGTGCACTAGGTGTACAAACATACTTTGCTCAGACGATGGAGCTTGAAGAATTCAACTTCCGGTGGAAGCAACAATTCCTGCAAGACCATCCAACTCTCATTGATGCTGAATTGGATATCTTAGCACTATGGGCTTATGATGCAGCTTTCGCACTAGCCATGGCAATCGAAGAAGTGGGGATCACAAGTACTGTCGACTTATTCCGAAAGAAAAAATCCTCCTTCAATTTGACAGATCTTGAGAACATTGAGATTTCCAAGTATGGTACGGACCTCTGCCGAGCCCTTTCGATGACTAGATTTGAAGGCATAGCTGGAAATTTCTACATTGTTGATGGTCAACTTCAGTCATCAACCTTTCGTATAGTGAATATAAATGAGGATGGAGCAAGAGATATTGGATTTTGGACACCACAAAATGGACTCGTGAACAAATTGAATTCGGCAAACACAAGCATACTTTCAACTAATTCGAAGTCCAACCTTAAAGCTAGTGTTATATGGCCTGGAGATTCTCTCTCTTTTCCCAAGGGATGGGAGATCCCAACAAATGGCAGAAAGTTGAGAATAGGAGTTCCTGTTAATGTCGGTGTTCCTGAGTTTGTTAAGGTCACAAAAGATCCAAGCACACATACAACTGAAGTCACAGGGTTTTCTATTGACGTCTTTAAGGCTGCAATAGAGGTATTGCCATATTCTCTTCCGTATGAGTTCATTCCCTTTGAAAATCCTACTGGCTCCATTGCCGCAACTTACAACGATTTGTGCTATCAAGTATATCTTGGGAACTTTGATGCCGTGGTGGGAGATGTAACAATCAGAGCAAACAGATCATTATACGTGGACTTTACAATGCCATACACAGAATCAGGCATAGTAATGGTTGTGCCAATCTTCGACACCCGGACCAACAATGCATGGGTATTCTTGAAGCCTCTGACATGGGATCTTTGGCTAACAACATCATGTTTCTTTGTTTTAATCGGTTTCGTGGTTTGGGTTCTTGAACATCGAATCAATGAAGATTTTCGTGGCCCTCCCTCACATCAAGTTGGCACTAGCGTCTGGTTCTCCTTCTCAACCATGGTGTTTTCACAAAGAGAGAGAGTGGTCAGCAACTTGGGAAGATTTGTGATGATTATATGGATATTTGTTTTGTTAATACTGACACAAAGTTACACGGCTAGTCTAGCTTCACTATTAACAGTCCAACAACTTCAACCAACTGTTACCGATATAAAAGATCTTTTAAGGAAGGGAGAAAAAGTGGGATATAGGAGCACTGCTTATACTTATGATCTATTGAAACAAGTAGGTTTTGACGATTCGAAGCTCAAAGGCTTTACAACTGTTGAAGAAATTCAGGAAGCTCTTTCAAAAGGGAGCCCAAATGGTGGTATTTCTGCTTTTGTTGACGAAACCCCATACACGAAGCTTCTTGTAGCCAAATATTGTTTGAAATTTACCGTGGTTGGACCTATCTTCAAAACTGTTGGGTTTGGCTTTGTGTTCCCAAAACGTTCCCCTCTTGTACCTGACGTATCACAAGCAGTGCTAAACGTGACCGAAGGAGAGAAGATATTGAACATTGAAAACAAATGGTTCAATAAACAAGAAAACAATTGTCAAGACTCTAGTACGCAACCAGTTTCCAGCAACAGTCTTGGGCTTGCCAGTTTTTGGGGTTTATTCTTGATTGCGGGGCTGGCTTCCATACTCGCACTCATCATCTTTATAGTTTGCTTTCTTTACGAGCATAGAAATATGATTCCCTCTGACTCGGGTGCCTCTAGATGGAGAAGGTTGCAGATCATGTTCGAAATCTTCAATCAAAAGGACCTTGACTCTCATACTTCTAAAACAAGTCGACAACGAGATTCAGTTCAAGCCCCAGTAAGTAACACCTTCGACGTAGTCGACTACAATTCAAACCAGACAGAGATACATTCCGTATCTTTTGAAGAACAAGAAATACCATCAACTGATCAAGACTCGATAGAAGTAGCCACTGAGGTTGCTATTACAATTCAAGAAATCCAAGCAACTACTCTTGTATAA

Protein Analysis

964

Amino Acids

107.83

Weight (kDa)

5.27

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 36 - 373 1.1e-22 Periplasmic binding protein
ANF_receptor PF01094 53 - 406 2.3e-83 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 483 - 575 3.5e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 491 - 815 6.3e-08 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 593 - 849 4e-41 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1503
AccB1I GGYRCC 1 cut(s) 2621
AccB7I CCANNNNNTGG 5 cut(s) 1256, 1371, 1388, 2231, 2517
AccI GTMKAC 4 cut(s) 528, 1032, 2704, 2754
AciI CCGC 4 cut(s) 16, 421, 1584, 2537
AclI AACGTT 2 cut(s) 252, 2356
AclWI GGATC 5 cut(s) 779, 1025, 1372, 1451, 1791
AcoI YGGCCR 1 cut(s) 69
AcsI RAATTY 8 cut(s) 639, 811, 826, 887, 1156, 1276, 2196, 2297
AcuI CTGAAG 2 cut(s) 1166, 1497
AcyI GRCGYC 1 cut(s) 1500
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 6 cut(s) 258, 852, 1027, 1105, 2370, 2476
AfiI CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
AjnI CCWGG 2 cut(s) 462, 1342
Alw21I GWGCWC 2 cut(s) 844, 2120
Alw26I GTCTC 1 cut(s) 499
Alw44I GTGCAC 1 cut(s) 840
AlwI GGATC 5 cut(s) 779, 1025, 1372, 1451, 1791
Ama87I CYCGRG 1 cut(s) 2617
AoxI GGCC 3 cut(s) 69, 1340, 1870
ApaLI GTGCAC 1 cut(s) 840
ApeKI GCWGC 5 cut(s) 263, 272, 423, 980, 1511
ApoI RAATTY 8 cut(s) 639, 811, 826, 887, 1156, 1276, 2196, 2297
AseI ATTAAT 1 cut(s) 351
Asp700I GAANNNNTTC 2 cut(s) 1863, 2196
AspLEI GCGC 1 cut(s) 178
AspS9I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
AsuC2I CCSGG 1 cut(s) 1741
AsuHPI GGTGA 2 cut(s) 478, 589
AsuII TTCGAA 3 cut(s) 1310, 2165, 2655
AvaI CYCGRG 1 cut(s) 2617
AvaII GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
BaeGI GKGCMC 1 cut(s) 844
BalI TGGCCA 1 cut(s) 71
BanI GGYRCC 1 cut(s) 2621
BanII GRGCYC 2 cut(s) 1123, 2225
BarI GAAGNNNNNNTAC 2 cut(s) 537, 569
BauI CACGAG 1 cut(s) 1262
BbsI GAAGAC 1 cut(s) 676
Bbv12I GWGCWC 2 cut(s) 844, 2120
BbvI GCAGC 5 cut(s) 275, 284, 435, 992, 1498
BceAI ACGGC 2 cut(s) 1619, 2034
BciT130I CCWGG 2 cut(s) 464, 1344
BclI TGATCA 2 cut(s) 634, 2821
BcnI CCSGG 1 cut(s) 1741
BcoDI GTCTC 1 cut(s) 499
BfmI CTRYAG 1 cut(s) 816
BfoI RGCGCY 1 cut(s) 179
BglII AGATCT 2 cut(s) 1072, 2080
BisI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
BlsI GCNGC 6 cut(s) 265, 274, 425, 982, 1513, 1585
BmcAI AGTACT 1 cut(s) 1027
Bme1390I CCNGG 3 cut(s) 464, 1344, 1741
Bme18I GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
BmeT110I CYCGRG 1 cut(s) 2617
BmgT120I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
BmiI GGNNCC 4 cut(s) 319, 1576, 2222, 2623
BmrFI CCNGG 3 cut(s) 464, 1344, 1741
BmrI ACTGGG 1 cut(s) 2723
BmsI GCATC 9 cut(s) 174, 203, 259, 325, 404, 559, 931, 967, 1621
BmuI ACTGGG 1 cut(s) 2723
BpiI GAAGAC 1 cut(s) 676
BplI GAGNNNNNCTC 2 cut(s) 1338, 1370
BpmI CTGGAG 1 cut(s) 1365
Bpu14I TTCGAA 3 cut(s) 1310, 2165, 2655
BpuEI CTTGAG 2 cut(s) 354, 1097
BpuMI CCSGG 1 cut(s) 1741
Bsa29I ATCGAT 1 cut(s) 806
BsaAI YACGTR 1 cut(s) 1678
BsaBI GATNNNNATC 1 cut(s) 132
BsaHI GRCGYC 1 cut(s) 1500
BsaJI CCNNGG 8 cut(s) 72, 462, 729, 996, 1365, 1635, 1920, 2304
BsaWI WCCGGW 1 cut(s) 897
BsaXI ACNNNNNCTCC 4 cut(s) 1401, 1431, 2088, 2118
Bsc4I CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
Bse1I ACTGG 6 cut(s) 104, 177, 1576, 2483, 2511, 2729
Bse3DI GCAATG 2 cut(s) 572, 1578
Bse8I GATNNNNATC 1 cut(s) 132
BseBI CCWGG 2 cut(s) 464, 1344
BseCI ATCGAT 1 cut(s) 806
BseDI CCNNGG 8 cut(s) 72, 462, 729, 996, 1365, 1635, 1920, 2304
BseGI GGATG 6 cut(s) 340, 458, 506, 925, 1225, 1376
BseJI GATNNNNATC 1 cut(s) 132
BseLI CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
BseMI GCAATG 2 cut(s) 572, 1578
BseMII CTCAG 4 cut(s) 195, 881, 1425, 2838
BseNI ACTGG 6 cut(s) 104, 177, 1576, 2483, 2511, 2729
BseSI GKGCMC 1 cut(s) 844
BseXI GCAGC 5 cut(s) 275, 284, 435, 992, 1498
BshFI GGCC 3 cut(s) 71, 1342, 1872
BshNI GGYRCC 1 cut(s) 2621
BshVI ATCGAT 1 cut(s) 806
BsiHKAI GWGCWC 2 cut(s) 844, 2120
BsiHKCI CYCGRG 1 cut(s) 2617
BsiSI CCGG 2 cut(s) 898, 1741
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 7 cut(s) 710, 1256, 1371, 1388, 2231, 2517, 2631
BsmAI GTCTC 1 cut(s) 499
BsmFI GGGAC 1 cut(s) 251
BsmI GAATGC 1 cut(s) 475
BsnI GGCC 3 cut(s) 71, 1342, 1872
BsoBI CYCGRG 1 cut(s) 2617
Bsp119I TTCGAA 3 cut(s) 1310, 2165, 2655
Bsp1286I GDGCHC 4 cut(s) 844, 1123, 2120, 2225
Bsp1407I TGTACA 1 cut(s) 850
Bsp19I CCATGG 3 cut(s) 72, 996, 1920
BspACI CCGC 4 cut(s) 16, 421, 1584, 2537
BspANI GGCC 3 cut(s) 71, 1342, 1872
BspCNI CTCAG 4 cut(s) 194, 880, 1426, 2839
BspDI ATCGAT 1 cut(s) 806
BspHI TCATGA 1 cut(s) 774
BspLI GGNNCC 4 cut(s) 319, 1576, 2222, 2623
BspPI GGATC 5 cut(s) 779, 1025, 1372, 1451, 1791
BspT104I TTCGAA 3 cut(s) 1310, 2165, 2655
BspT107I GGYRCC 1 cut(s) 2621
BsrDI GCAATG 2 cut(s) 572, 1578
BsrGI TGTACA 1 cut(s) 850
BsrI ACTGG 6 cut(s) 104, 177, 1576, 2483, 2511, 2729
BssECI CCNNGG 8 cut(s) 72, 462, 729, 996, 1365, 1635, 1920, 2304
BssNI GRCGYC 1 cut(s) 1500
BssSI CACGAG 1 cut(s) 1262
BssT1I CCWWGG 5 cut(s) 72, 729, 996, 1365, 1920
Bst2BI CACGAG 1 cut(s) 1262
Bst2UI CCWGG 2 cut(s) 464, 1344
Bst4CI ACNGT 8 cut(s) 820, 1030, 2044, 2065, 2188, 2305, 2329, 2498
Bst6I CTCTTC 1 cut(s) 1542
BstACI GRCGYC 1 cut(s) 1500
BstAPI GCANNNNNTGC 2 cut(s) 200, 269
BstAUI TGTACA 1 cut(s) 850
BstBAI YACGTR 1 cut(s) 1678
BstBI TTCGAA 3 cut(s) 1310, 2165, 2655
BstC8I GCNNGC 3 cut(s) 340, 2508, 2544
BstDEI CTNAG 5 cut(s) 181, 867, 958, 1434, 2847
BstDSI CCRYGG 5 cut(s) 72, 996, 1635, 1920, 2304
BstF5I GGATG 6 cut(s) 340, 458, 506, 925, 1225, 1376
BstH2I RGCGCY 1 cut(s) 179
BstHHI GCGC 1 cut(s) 178
BstMAI GTCTC 1 cut(s) 499
BstMWI GCNNNNNNNGC 9 cut(s) 200, 269, 272, 479, 968, 977, 986, 2027, 2543
BstNI CCWGG 2 cut(s) 464, 1344
BstSCI CCNGG 3 cut(s) 462, 1342, 1739
BstSFI CTRYAG 1 cut(s) 816
BstSLI GKGCMC 1 cut(s) 844
BstV1I GCAGC 5 cut(s) 275, 284, 435, 992, 1498
BstV2I GAAGAC 1 cut(s) 676
BstX2I RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
BstYI RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
Bsu15I ATCGAT 1 cut(s) 806
BsuRI GGCC 3 cut(s) 71, 1342, 1872
BsuTUI ATCGAT 1 cut(s) 806
BtgI CCRYGG 5 cut(s) 72, 996, 1635, 1920, 2304
BtsCI GGATG 6 cut(s) 340, 458, 506, 925, 1225, 1376
BtsI GCAGTG 2 cut(s) 2118, 2394
BtsIMutI CAGTG 4 cut(s) 111, 2118, 2394, 2844
Cac8I GCNNGC 3 cut(s) 340, 2508, 2544
CciI TCATGA 1 cut(s) 774
CfoI GCGC 1 cut(s) 178
Cfr13I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
ClaI ATCGAT 1 cut(s) 806
CseI GACGC 1 cut(s) 1888
Csp6I GTAC 6 cut(s) 257, 851, 1026, 1104, 2369, 2475
CspCI CAANNNNNGTGG 2 cut(s) 2833, 2868
CviQI GTAC 6 cut(s) 257, 851, 1026, 1104, 2369, 2475
DdeI CTNAG 5 cut(s) 181, 867, 958, 1434, 2847
DraIII CACNNNGTG 1 cut(s) 848
EaeI YGGCCR 1 cut(s) 69
Eam1104I CTCTTC 1 cut(s) 1542
EarI CTCTTC 1 cut(s) 1542
Eco130I CCWWGG 5 cut(s) 72, 729, 996, 1365, 1920
Eco24I GRGCYC 2 cut(s) 1123, 2225
Eco32I GATATC 1 cut(s) 955
Eco47I GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
Eco57I CTGAAG 2 cut(s) 1166, 1497
Eco88I CYCGRG 1 cut(s) 2617
EcoO109I RGGNCCY 2 cut(s) 317, 2674
EcoRI GAATTC 3 cut(s) 811, 887, 1276
EcoRII CCWGG 2 cut(s) 462, 1342
EcoRV GATATC 1 cut(s) 955
EcoT14I CCWWGG 5 cut(s) 72, 729, 996, 1365, 1920
EcoT22I ATGCAT 3 cut(s) 196, 574, 1756
EcoT38I GRGCYC 2 cut(s) 1123, 2225
ErhI CCWWGG 5 cut(s) 72, 729, 996, 1365, 1920
FalI AAGNNNNNCTT 2 cut(s) 1602, 1634
FaqI GGGAC 1 cut(s) 251
FauI CCCGC 2 cut(s) 23, 2530
FauNDI CATATG 1 cut(s) 696
FbaI TGATCA 2 cut(s) 634, 2821
FblI GTMKAC 4 cut(s) 528, 1032, 2704, 2754
Fnu4HI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
FokI GGATG 6 cut(s) 347, 445, 513, 912, 1232, 1383
FriOI GRGCYC 2 cut(s) 1123, 2225
Fsp4HI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
GlaI GCGC 1 cut(s) 177
GluI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
GsuI CTGGAG 1 cut(s) 1365
HaeII RGCGCY 1 cut(s) 179
HaeIII GGCC 3 cut(s) 71, 1342, 1872
HapII CCGG 2 cut(s) 898, 1741
HgaI GACGC 1 cut(s) 1888
HhaI GCGC 1 cut(s) 178
Hin1I GRCGYC 1 cut(s) 1500
Hin6I GCGC 1 cut(s) 176
HinP1I GCGC 1 cut(s) 176
HincII GTYRAC 7 cut(s) 454, 801, 1033, 1178, 2251, 2705, 2755
HindII GTYRAC 7 cut(s) 454, 801, 1033, 1178, 2251, 2705, 2755
HindIII AAGCTT 1 cut(s) 2270
HpaI GTTAAC 1 cut(s) 801
HpaII CCGG 2 cut(s) 898, 1741
HphI GGTGA 2 cut(s) 478, 589
Hpy188I TCNGA 8 cut(s) 184, 244, 705, 870, 1043, 1658, 1776, 2614
Hpy99I CGWCG 1 cut(s) 2750
HpyAV CCTTC 8 cut(s) 539, 1069, 1136, 1921, 2086, 2399, 2631, 2752
HpyCH4III ACNGT 8 cut(s) 820, 1030, 2044, 2065, 2188, 2305, 2329, 2498
HpyCH4IV ACGT 7 cut(s) 252, 1500, 1677, 2356, 2376, 2397, 2748
HpyF10VI GCNNNNNNNGC 9 cut(s) 200, 269, 272, 479, 968, 977, 986, 2027, 2543
HpyF3I CTNAG 5 cut(s) 181, 867, 958, 1434, 2847
HpySE526I ACGT 7 cut(s) 252, 1500, 1677, 2356, 2376, 2397, 2748
Hsp92I GRCGYC 1 cut(s) 1500
HspAI GCGC 1 cut(s) 176
Ksp22I TGATCA 2 cut(s) 634, 2821
KspAI GTTAAC 1 cut(s) 801
LmnI GCTCC 6 cut(s) 431, 877, 1223, 1580, 2115, 2220
Lsp1109I GCAGC 5 cut(s) 275, 284, 435, 992, 1498
LweI GCATC 9 cut(s) 174, 203, 259, 325, 404, 559, 931, 967, 1621
MaeII ACGT 7 cut(s) 252, 1500, 1677, 2356, 2376, 2397, 2748
MaeIII GTNAC 9 cut(s) 322, 595, 1447, 1480, 1648, 2012, 2065, 2398, 2735
MfeI CAATTG 1 cut(s) 2458
MflI RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
MhlI GDGCHC 4 cut(s) 844, 1123, 2120, 2225
MlsI TGGCCA 1 cut(s) 71
MluNI TGGCCA 1 cut(s) 71
MmeI TCCRAC 4 cut(s) 953, 1341, 2071, 2290
Mox20I TGGCCA 1 cut(s) 71
Mph1103I ATGCAT 3 cut(s) 196, 574, 1756
MroXI GAANNNNTTC 2 cut(s) 1863, 2196
MscI TGGCCA 1 cut(s) 71
MslI CAYNNNNRTG 1 cut(s) 1715
Msp20I TGGCCA 1 cut(s) 71
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 2 cut(s) 898, 1741
MspR9I CCNGG 3 cut(s) 464, 1344, 1741
MunI CAATTG 1 cut(s) 2458
Mva1269I GAATGC 1 cut(s) 475
MvaI CCWGG 2 cut(s) 464, 1344
MwoI GCNNNNNNNGC 9 cut(s) 200, 269, 272, 479, 968, 977, 986, 2027, 2543
NciI CCSGG 1 cut(s) 1741
NcoI CCATGG 3 cut(s) 72, 996, 1920
NdeI CATATG 1 cut(s) 696
NlaIV GGNNCC 4 cut(s) 319, 1576, 2222, 2623
NmeAIII GCCGAG 1 cut(s) 1142
NmuCI GTSAC 5 cut(s) 322, 595, 1447, 1480, 2398
NsiI ATGCAT 3 cut(s) 196, 574, 1756
NspV TTCGAA 3 cut(s) 1310, 2165, 2655
PagI TCATGA 1 cut(s) 774
PcsI WCGNNNNNNNCGW 1 cut(s) 2751
PctI GAATGC 1 cut(s) 475
PdmI GAANNNNTTC 2 cut(s) 1863, 2196
PfeI GAWTC 8 cut(s) 700, 706, 1349, 1703, 1851, 2162, 2605, 2714
PflFI GACNNNGTC 1 cut(s) 2750
PflMI CCANNNNNTGG 5 cut(s) 1256, 1371, 1388, 2231, 2517
PkrI GCNGC 6 cut(s) 265, 274, 425, 982, 1513, 1585
Ppu21I YACGTR 1 cut(s) 1678
PpuMI RGGWCCY 2 cut(s) 317, 2674
PshBI ATTAAT 1 cut(s) 351
Psp1406I AACGTT 2 cut(s) 252, 2356
Psp5II RGGWCCY 2 cut(s) 317, 2674
Psp6I CCWGG 2 cut(s) 462, 1342
PspGI CCWGG 2 cut(s) 462, 1342
PspN4I GGNNCC 4 cut(s) 319, 1576, 2222, 2623
PspPI GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
PspPPI RGGWCCY 2 cut(s) 317, 2674
PsrI GAACNNNNNNTAC 2 cut(s) 2793, 2825
PsuI RGATCY 5 cut(s) 1072, 1377, 1456, 1783, 2080
PsyI GACNNNGTC 1 cut(s) 2750
PvuII CAGCTG 1 cut(s) 266
RsaI GTAC 6 cut(s) 258, 852, 1027, 1105, 2370, 2476
RsaNI GTAC 6 cut(s) 257, 851, 1026, 1104, 2369, 2475
RseI CAYNNNNRTG 1 cut(s) 1715
SalI GTCGAC 3 cut(s) 1031, 2703, 2753
SatI GCNGC 6 cut(s) 264, 273, 424, 981, 1512, 1584
Sau96I GGNCC 6 cut(s) 317, 1108, 1743, 1871, 2312, 2674
ScaI AGTACT 1 cut(s) 1027
ScrFI CCNGG 3 cut(s) 464, 1344, 1741
SduI GDGCHC 4 cut(s) 844, 1123, 2120, 2225
SfaNI GCATC 9 cut(s) 174, 203, 259, 325, 404, 559, 931, 967, 1621
SfcI CTRYAG 1 cut(s) 816
SfuI TTCGAA 3 cut(s) 1310, 2165, 2655
SinI GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
SmiMI CAYNNNNRTG 1 cut(s) 1715
SmlI CTYRAG 3 cut(s) 5, 369, 1076
SmoI CTYRAG 3 cut(s) 5, 369, 1076
SsiI CCGC 4 cut(s) 16, 421, 1584, 2537
SspI AATATT 1 cut(s) 2288
StyD4I CCNGG 3 cut(s) 462, 1342, 1739
StyI CCWWGG 5 cut(s) 72, 729, 996, 1365, 1920
TaaI ACNGT 8 cut(s) 820, 1030, 2044, 2065, 2188, 2305, 2329, 2498
TaiI ACGT 7 cut(s) 255, 1503, 1680, 2359, 2379, 2400, 2751
TaqII GACCGA 1 cut(s) 2417
TatI WGTACW 2 cut(s) 850, 1025
TauI GCSGC 1 cut(s) 1586
TfiI GAWTC 8 cut(s) 700, 706, 1349, 1703, 1851, 2162, 2605, 2714
TscAI CASTG 4 cut(s) 111, 2125, 2394, 2851
TseFI GTSAC 5 cut(s) 322, 595, 1447, 1480, 2398
TseI GCWGC 5 cut(s) 263, 272, 423, 980, 1511
Tsp45I GTSAC 5 cut(s) 322, 595, 1447, 1480, 2398
TspDTI ATGAA 7 cut(s) 45, 375, 676, 713, 824, 1540, 1872
TspGWI ACGGA 3 cut(s) 1121, 1530, 2776
TspRI CASTG 4 cut(s) 111, 2125, 2394, 2851
Tth111I GACNNNGTC 1 cut(s) 2750
Van91I CCANNNNNTGG 5 cut(s) 1256, 1371, 1388, 2231, 2517
VneI GTGCAC 1 cut(s) 840
VpaK11BI GGWCC 5 cut(s) 317, 1108, 1743, 2312, 2674
VspI ATTAAT 1 cut(s) 351
XapI RAATTY 8 cut(s) 639, 811, 826, 887, 1156, 1276, 2196, 2297
XbaI TCTAGA 2 cut(s) 277, 2627
XmiI GTMKAC 4 cut(s) 528, 1032, 2704, 2754
XmnI GAANNNNTTC 2 cut(s) 1863, 2196
ZraI GACGTC 1 cut(s) 1501
ZrmI AGTACT 1 cut(s) 1027
Zsp2I ATGCAT 3 cut(s) 196, 574, 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.