Rmu_sc0003863.1_g000004

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003863.1
OG0000051
Physical Location & Seq
Forward (+)
31343 .. 36081
4739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003863.1_g000004.1.cds

Sequence Viewer

Length: 2799 bp
atggcaatgggagagaacacaagcatctcagtgaatgtgggtgttattcttgaccttgataattcactgaatacaaaagtttggttgagctgcataaagatggcaatctcagacttttatacttctcatggtccctctaagacgagactggttttgaacattaaggactccagaagtgaagttgtggatgccgctgcagcagctttggacctgataaagaatgttcaagtggaagcaataataggacccaaatcttcaatgcaagccaactttgtaattgatcttggagacaaagctcaggtgcccataatctcattttcagcaacaagtccttcccttacctcccttcaaagttcgtattttttccgagctgcacaaaatgattcctctcaagtcaaagccattagtgcaattattaaagcttttggatggagagtagctatacccatctatgtagaaaatgcttacggcgagggggtgctaccatccttggtggatgccttgcaagatgttcgagtccgtgtcccttacagaagtgccatacctccgacagccacagatgaccaacttgcccaggaactttacaagttaatgacgatgcaaacaagagtctttatcgtgcatatgtacccctcgattgggtctcggcttttcgccaaagcagatgagatagggatgatgaaggaaggctacgtttggatcatgaccaatgggttaactaatcacttgagttcaacaaatgcttcaatcatcaattcaatgcaaggggcactaggtttgaggactttcgtaccaaagacggaacagcttattgattttagaagtcgttggaaaaggcagttccaacatgaaaatccaaccatcattgatgttgagttggatgtgtttggactctgggcttatgatgctgcttacgcattagccatggcagttgagagtgttcgcactaccagatcactctttggctcccacaccacaaatgcttccatcaactcatcaacagatctcgaaactctcagggtctctccgagtggtcgtgaactttctcactccttgtcaagtactaggttcagaggccttgcgggagatttcagtttcttcaatgggcagttgcaatcttcggtgtttgaaatagtgaatgtgaatggtgaaggagcaagaggaattgggttttggtcaccacagtgtggacttatgaaagatatgagcaaaaaactagatgcaaacagttcatactcaacttctaaatctgacatgggaccgataatatggccaggagattctacctcaactccaaagggatgggaacttcccacaaatagcaaaaggttgagagtaggcgttcctgtgaaagttggttctcctgagtttgtgaaggtggtgcatgatcctgtcactaatagaatagatgtcactgggttctgtattgacatgttcaatgctgtaatggaagggttaccatatgctgttacatatgatttcattccctttgcaaagccagatggtactagtgctggtacttacaatgacatggtccatcaagtttttcttgggaatttcgatgcattggccgcagctacaacaattagagcaaacagatctttgtatgttgacttcacattgccatacacagattcaggtgtagtaatggtagtgcctatgaaagacagcaagagccgcaatgcatggatttttctgaagcctttgacatgggacctctggcttacaagttcttgctctttcatcttcattggttttgtgatttgggttcttgaacaccggattaatgacgattttcgtgggcctccatcgcaccaagttggcacaagcatatggttttctttctcaacaatggtttttgcacagcgcgaaaaggttgttagcaactcgggtaggtctgtggtgatagtgtgggcatttgtggtgctgatactgactcaaagttacacagcgagtctgacttcgttattaacactcaaacatctccagccaacttgtaccgatataaatgatcttttaaaaaataaggagtctgtgggatacccgaagggttcttttgtccgcgatcttttgatagaaaaaggttttgatctttctaggattaagtcttatacatcaccagatgaatgtgaccaacttttggaatacggaagcgcaaaaggtggtattgctgctgctatagatgaaacgcccaacttgaagctttttcttgcgaagtactgcaccaaatacaccatggttttccccaaaggttcgcctctcgtaccagatgtttcaaggtcgattttgaacgtgactgagggagaggaaatgaagaacatcgaaaataaatggtttggaaaaaaggccacttgttcagttaccaacccgatgctctcggattccagtagccttggggttgatagtttttggggtcttttcctcattgccggtttcaatgttttgagaaattctgctcgtccggcggccctcgaagttggtgcaggtttgccttgcaactattgggtcactgccggacgggtgttgaaccctattttctcaggaagttcagaagagaggagtcgggctcaaggtgttgcatgggaaggatggtttccagaagaagtctctcaaggtgttcgcgtcgtgttgtgcagtgatgggatcgactccggcgtgggctctgcagaatcaagtggcggcacggtttctgataggttgagcggcgacgtggttatgaggaactggaggatctgggtggcttgtgattctggtggagtgcgcggcgaggtcgagtggtggctgtggtatgctgggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

932

Amino Acids

102.39

Weight (kDa)

6.09

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2474
AccB1I GGYRCC 1 cut(s) 301
AccB7I CCANNNNNTGG 2 cut(s) 1187, 2140
AccBSI CCGCTC 1 cut(s) 2703
AccII CGCG 4 cut(s) 1869, 2064, 2622, 2763
AciI CCGC 9 cut(s) 192, 1082, 1572, 1678, 2062, 2465, 2679, 2703, 2763
AclWI GGATC 4 cut(s) 707, 1382, 2651, 2738
AcoI YGGCCR 2 cut(s) 1271, 1569
AcsI RAATTY 2 cut(s) 1555, 2449
AcuI CTGAAG 1 cut(s) 1718
AdeI CACNNNGTG 1 cut(s) 1187
AfaI GTAC 8 cut(s) 629, 792, 1063, 1507, 1519, 1999, 2219, 2265
AfiI CCNNNNNNNGG 4 cut(s) 638, 639, 1187, 2140
AflIII ACRYGT 1 cut(s) 1431
AhlI ACTAGT 1 cut(s) 1508
AjiI CACGTC 1 cut(s) 2710
AjnI CCWGG 2 cut(s) 573, 1273
AjuI GAANNNNNNNTTGG 2 cut(s) 1156, 1188
AleI CACNNNNGTG 1 cut(s) 1183
AluBI AGCT 9 cut(s) 90, 203, 296, 371, 422, 440, 808, 1577, 2203
AluI AGCT 9 cut(s) 90, 203, 296, 371, 422, 440, 808, 1577, 2203
Alw26I GTCTC 5 cut(s) 139, 282, 648, 1027, 2611
AlwI GGATC 4 cut(s) 707, 1382, 2651, 2738
Ama87I CYCGRG 1 cut(s) 1888
AoxI GGCC 6 cut(s) 1075, 1271, 1569, 1802, 2346, 2466
ApeKI GCWGC 9 cut(s) 90, 194, 197, 200, 371, 908, 1574, 2171, 2174
ApoI RAATTY 2 cut(s) 1555, 2449
AseI ATTAAT 1 cut(s) 1785
AspLEI GCGC 3 cut(s) 1869, 2156, 2763
AspS9I GGNCC 8 cut(s) 131, 208, 245, 1259, 1534, 1714, 1802, 2467
AsuHPI GGTGA 4 cut(s) 1160, 1170, 1915, 2109
AvaI CYCGRG 1 cut(s) 1888
AvaII GGWCC 6 cut(s) 131, 208, 245, 1259, 1534, 1714
BaeGI GKGCMC 2 cut(s) 306, 772
BaeI ACNNNNGTAYC 2 cut(s) 774, 807
BalI TGGCCA 1 cut(s) 1273
BanI GGYRCC 1 cut(s) 301
BanII GRGCYC 2 cut(s) 2569, 2663
BarI GAAGNNNNNNTAC 4 cut(s) 674, 706, 1598, 1630
BbvI GCAGC 9 cut(s) 77, 181, 209, 212, 358, 895, 1586, 2158, 2161
BceAI ACGGC 1 cut(s) 484
BcgI CGANNNNNNTGC 4 cut(s) 494, 528, 2462, 2496
BciT130I CCWGG 2 cut(s) 575, 1275
BciVI GTATCC 1 cut(s) 2033
BcoDI GTCTC 5 cut(s) 139, 282, 648, 1027, 2611
BcuI ACTAGT 1 cut(s) 1508
BfaI CTAG 5 cut(s) 773, 1065, 1217, 1509, 2097
BfmI CTRYAG 3 cut(s) 195, 2178, 2664
BfuAI ACCTGC 1 cut(s) 2474
BfuI GTATCC 1 cut(s) 2033
BglII AGATCT 2 cut(s) 1003, 1598
BmcAI AGTACT 2 cut(s) 1063, 2219
Bme1390I CCNGG 2 cut(s) 575, 1275
Bme18I GGWCC 6 cut(s) 131, 208, 245, 1259, 1534, 1714
BmeT110I CYCGRG 1 cut(s) 1888
BmgBI CACGTC 1 cut(s) 2710
BmgT120I GGNCC 8 cut(s) 131, 208, 245, 1259, 1534, 1714, 1802, 2467
BmiI GGNNCC 6 cut(s) 133, 247, 303, 967, 1260, 1715
BmrFI CCNGG 2 cut(s) 575, 1275
BmrI ACTGGG 1 cut(s) 1425
BmsI GCATC 8 cut(s) 33, 178, 487, 588, 895, 1210, 1552, 2361
BmuI ACTGGG 1 cut(s) 1425
BplI GAGNNNNNCTC 2 cut(s) 2551, 2583
BpmI CTGGAG 3 cut(s) 154, 1970, 2746
Bpu10I CCTNAGC 1 cut(s) 297
BpuEI CTTGAG 4 cut(s) 375, 748, 2553, 2595
BsaBI GATNNNNATC 1 cut(s) 104
BsaI GGTCTC 2 cut(s) 648, 1027
BsaJI CCNNGG 5 cut(s) 489, 573, 924, 2235, 2392
BsaWI WCCGGW 1 cut(s) 1779
BsaXI ACNNNNNCTCC 2 cut(s) 1276, 1306
Bsc4I CCNNNNNNNGG 4 cut(s) 638, 639, 1187, 2140
Bse118I RCCGGY 1 cut(s) 2429
Bse1I ACTGG 4 cut(s) 153, 1420, 2385, 2729
Bse3DI GCAATG 4 cut(s) 12, 1619, 1687, 2424
Bse8I GATNNNNATC 1 cut(s) 104
BseBI CCWGG 2 cut(s) 575, 1275
BseDI CCNNGG 5 cut(s) 489, 573, 924, 2235, 2392
BseGI GGATG 8 cut(s) 193, 434, 485, 502, 681, 886, 1307, 2594
BseJI GATNNNNATC 1 cut(s) 104
BseLI CCNNNNNNNGG 4 cut(s) 638, 639, 1187, 2140
BseMI GCAATG 4 cut(s) 12, 1619, 1687, 2424
BseMII CTCAG 7 cut(s) 42, 123, 311, 1030, 1356, 2289, 2553
BseNI ACTGG 4 cut(s) 153, 1420, 2385, 2729
BseRI GAGGAG 1 cut(s) 2572
BseSI GKGCMC 2 cut(s) 306, 772
BseXI GCAGC 9 cut(s) 77, 181, 209, 212, 358, 895, 1586, 2158, 2161
BseYI CCCAGC 1 cut(s) 2792
BsgI GTGCAG 4 cut(s) 357, 2206, 2502, 2653
Bsh1236I CGCG 4 cut(s) 1869, 2064, 2622, 2763
BshFI GGCC 6 cut(s) 1077, 1273, 1571, 1804, 2348, 2468
BshNI GGYRCC 1 cut(s) 301
BsiHKCI CYCGRG 1 cut(s) 1888
BsiSI CCGG 5 cut(s) 1780, 2430, 2462, 2514, 2652
BslFI GGGAC 4 cut(s) 117, 509, 1272, 1727
BslI CCNNNNNNNGG 4 cut(s) 638, 639, 1187, 2140
BsmAI GTCTC 5 cut(s) 139, 282, 648, 1027, 2611
BsmFI GGGAC 4 cut(s) 117, 509, 1272, 1727
BsnI GGCC 6 cut(s) 1077, 1273, 1571, 1804, 2348, 2468
Bso31I GGTCTC 2 cut(s) 648, 1027
BsoBI CYCGRG 1 cut(s) 1888
Bsp1286I GDGCHC 4 cut(s) 306, 772, 2569, 2663
Bsp19I CCATGG 2 cut(s) 924, 2235
BspACI CCGC 9 cut(s) 192, 1082, 1572, 1678, 2062, 2465, 2679, 2703, 2763
BspANI GGCC 6 cut(s) 1077, 1273, 1571, 1804, 2348, 2468
BspCNI CTCAG 7 cut(s) 41, 122, 310, 1029, 1357, 2290, 2552
BspFNI CGCG 4 cut(s) 1869, 2064, 2622, 2763
BspHI TCATGA 1 cut(s) 702
BspLI GGNNCC 6 cut(s) 133, 247, 303, 967, 1260, 1715
BspMAI CTGCAG 2 cut(s) 199, 2668
BspMI ACCTGC 1 cut(s) 2474
BspPI GGATC 4 cut(s) 707, 1382, 2651, 2738
BspT107I GGYRCC 1 cut(s) 301
BspTNI GGTCTC 2 cut(s) 648, 1027
BsrBI CCGCTC 1 cut(s) 2703
BsrDI GCAATG 4 cut(s) 12, 1619, 1687, 2424
BsrFI RCCGGY 1 cut(s) 2429
BsrI ACTGG 4 cut(s) 153, 1420, 2385, 2729
BssAI RCCGGY 1 cut(s) 2429
BssECI CCNNGG 5 cut(s) 489, 573, 924, 2235, 2392
BssT1I CCWWGG 4 cut(s) 489, 924, 2235, 2392
Bst2UI CCWGG 2 cut(s) 575, 1275
Bst4CI ACNGT 3 cut(s) 1185, 1229, 2686
Bst6I CTCTTC 1 cut(s) 2547
BstC8I GCNNGC 1 cut(s) 264
BstDEI CTNAG 8 cut(s) 28, 109, 138, 297, 1016, 1365, 2298, 2539
BstDSI CCRYGG 2 cut(s) 924, 2235
BstEII GGTNACC 2 cut(s) 1176, 1455
BstF5I GGATG 8 cut(s) 193, 434, 485, 502, 681, 886, 1307, 2594
BstFNI CGCG 4 cut(s) 1869, 2064, 2622, 2763
BstHHI GCGC 3 cut(s) 1869, 2156, 2763
BstMAI GTCTC 5 cut(s) 139, 282, 648, 1027, 2611
BstMWI GCNNNNNNNGC 9 cut(s) 197, 200, 407, 905, 914, 1571, 1677, 1810, 2462
BstNI CCWGG 2 cut(s) 575, 1275
BstNSI RCATGY 1 cut(s) 1435
BstPI GGTNACC 2 cut(s) 1176, 1455
BstSCI CCNGG 2 cut(s) 573, 1273
BstSFI CTRYAG 3 cut(s) 195, 2178, 2664
BstSLI GKGCMC 2 cut(s) 306, 772
BstUI CGCG 4 cut(s) 1869, 2064, 2622, 2763
BstV1I GCAGC 9 cut(s) 77, 181, 209, 212, 358, 895, 1586, 2158, 2161
BstX2I RGATCY 3 cut(s) 1003, 1598, 2730
BstXI CCANNNNNNTGG 1 cut(s) 1302
BstYI RGATCY 3 cut(s) 1003, 1598, 2730
BsuI GTATCC 1 cut(s) 2033
BsuRI GGCC 6 cut(s) 1077, 1273, 1571, 1804, 2348, 2468
BtgI CCRYGG 2 cut(s) 924, 2235
BtgZI GCGATG 1 cut(s) 1794
BtrI CACGTC 1 cut(s) 2710
BtsCI GGATG 8 cut(s) 193, 434, 485, 502, 681, 886, 1307, 2594
BtsI GCAGTG 2 cut(s) 2508, 2641
BtsIMutI CAGTG 6 cut(s) 36, 65, 1190, 1413, 2508, 2641
BveI ACCTGC 1 cut(s) 2474
Cac8I GCNNGC 1 cut(s) 264
CciI TCATGA 1 cut(s) 702
CfoI GCGC 3 cut(s) 1869, 2156, 2763
Cfr10I RCCGGY 1 cut(s) 2429
Cfr13I GGNCC 8 cut(s) 131, 208, 245, 1259, 1534, 1714, 1802, 2467
CseI GACGC 1 cut(s) 2611
Csp6I GTAC 8 cut(s) 628, 791, 1062, 1506, 1518, 1998, 2218, 2264
CviQI GTAC 8 cut(s) 628, 791, 1062, 1506, 1518, 1998, 2218, 2264
DdeI CTNAG 8 cut(s) 28, 109, 138, 297, 1016, 1365, 2298, 2539
DraI TTTAAA 1 cut(s) 2019
DraIII CACNNNGTG 1 cut(s) 1187
EaeI YGGCCR 2 cut(s) 1271, 1569
Eam1104I CTCTTC 1 cut(s) 2547
EarI CTCTTC 1 cut(s) 2547
Eco130I CCWWGG 4 cut(s) 489, 924, 2235, 2392
Eco147I AGGCCT 1 cut(s) 1077
Eco24I GRGCYC 2 cut(s) 2569, 2663
Eco31I GGTCTC 2 cut(s) 648, 1027
Eco47I GGWCC 6 cut(s) 131, 208, 245, 1259, 1534, 1714
Eco57I CTGAAG 1 cut(s) 1718
Eco88I CYCGRG 1 cut(s) 1888
Eco91I GGTNACC 2 cut(s) 1176, 1455
EcoO109I RGGNCCY 2 cut(s) 245, 1714
EcoO65I GGTNACC 2 cut(s) 1176, 1455
EcoRII CCWGG 2 cut(s) 573, 1273
EcoT14I CCWWGG 4 cut(s) 489, 924, 2235, 2392
EcoT22I ATGCAT 2 cut(s) 1567, 1687
EcoT38I GRGCYC 2 cut(s) 2569, 2663
ErhI CCWWGG 4 cut(s) 489, 924, 2235, 2392
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FaqI GGGAC 4 cut(s) 117, 509, 1272, 1727
FauI CCCGC 1 cut(s) 1075
FauNDI CATATG 4 cut(s) 624, 1462, 1474, 1832
FokI GGATG 8 cut(s) 200, 441, 472, 509, 688, 893, 1314, 2601
FriOI GRGCYC 2 cut(s) 2569, 2663
FspBI CTAG 5 cut(s) 773, 1065, 1217, 1509, 2097
GlaI GCGC 3 cut(s) 1868, 2155, 2762
GsaI CCCAGC 1 cut(s) 2796
GsuI CTGGAG 3 cut(s) 154, 1970, 2746
HaeIII GGCC 6 cut(s) 1077, 1273, 1571, 1804, 2348, 2468
HapII CCGG 5 cut(s) 1780, 2430, 2462, 2514, 2652
HgaI GACGC 1 cut(s) 2611
HhaI GCGC 3 cut(s) 1869, 2156, 2763
Hin6I GCGC 3 cut(s) 1867, 2154, 2761
HinP1I GCGC 3 cut(s) 1867, 2154, 2761
HincII GTYRAC 2 cut(s) 717, 1612
HindII GTYRAC 2 cut(s) 717, 1612
HindIII AAGCTT 2 cut(s) 420, 2201
HpaI GTTAAC 1 cut(s) 717
HpaII CCGG 5 cut(s) 1780, 2430, 2462, 2514, 2652
HphI GGTGA 4 cut(s) 1160, 1170, 1915, 2109
Hpy166II GTNNAC 4 cut(s) 717, 1040, 1190, 1612
Hpy188III TCNNGA 9 cut(s) 50, 171, 703, 1007, 1037, 1364, 1772, 2541, 2597
Hpy8I GTNNAC 4 cut(s) 717, 1040, 1190, 1612
Hpy99I CGWCG 2 cut(s) 2627, 2711
HpyAV CCTTC 9 cut(s) 342, 356, 676, 680, 1145, 1369, 1445, 2041, 2579
HpyCH4III ACNGT 3 cut(s) 1185, 1229, 2686
HpyCH4IV ACGT 3 cut(s) 693, 2292, 2709
HpyF10VI GCNNNNNNNGC 9 cut(s) 197, 200, 407, 905, 914, 1571, 1677, 1810, 2462
HpyF3I CTNAG 8 cut(s) 28, 109, 138, 297, 1016, 1365, 2298, 2539
HpySE526I ACGT 3 cut(s) 693, 2292, 2709
HspAI GCGC 3 cut(s) 1867, 2154, 2761
KspAI GTTAAC 1 cut(s) 717
LmnI GCTCC 2 cut(s) 971, 1154
Lsp1109I GCAGC 9 cut(s) 77, 181, 209, 212, 358, 895, 1586, 2158, 2161
LweI GCATC 8 cut(s) 33, 178, 487, 588, 895, 1210, 1552, 2361
MaeI CTAG 5 cut(s) 773, 1065, 1217, 1509, 2097
MaeII ACGT 3 cut(s) 693, 2292, 2709
MbiI CCGCTC 1 cut(s) 2703
MboII GAAGA 7 cut(s) 246, 1090, 1110, 1738, 2326, 2564, 2612
MflI RGATCY 3 cut(s) 1003, 1598, 2730
MhlI GDGCHC 4 cut(s) 306, 772, 2569, 2663
MlsI TGGCCA 1 cut(s) 1273
MluCI AATT 8 cut(s) 61, 276, 411, 754, 1164, 1555, 1584, 2449
MluNI TGGCCA 1 cut(s) 1273
MlyI GAGTC 9 cut(s) 161, 525, 618, 885, 1930, 1963, 2039, 2569, 2642
MmeI TCCRAC 5 cut(s) 572, 809, 858, 868, 881
Mox20I TGGCCA 1 cut(s) 1273
Mph1103I ATGCAT 2 cut(s) 1567, 1687
MscI TGGCCA 1 cut(s) 1273
MseI TTAA 8 cut(s) 162, 417, 590, 716, 1785, 1970, 2018, 2103
MslI CAYNNNNRTG 3 cut(s) 29, 98, 1183
Msp20I TGGCCA 1 cut(s) 1273
MspA1I CMGCKG 1 cut(s) 194
MspI CCGG 5 cut(s) 1780, 2430, 2462, 2514, 2652
MspR9I CCNGG 2 cut(s) 575, 1275
MvaI CCWGG 2 cut(s) 575, 1275
MvnI CGCG 4 cut(s) 1869, 2064, 2622, 2763
MwoI GCNNNNNNNGC 9 cut(s) 197, 200, 407, 905, 914, 1571, 1677, 1810, 2462
NcoI CCATGG 2 cut(s) 924, 2235
NdeI CATATG 4 cut(s) 624, 1462, 1474, 1832
NlaIV GGNNCC 6 cut(s) 133, 247, 303, 967, 1260, 1715
NmeAIII GCCGAG 1 cut(s) 625
NmuCI GTSAC 6 cut(s) 1176, 1393, 1411, 2129, 2293, 2506
NsiI ATGCAT 2 cut(s) 1567, 1687
NspI RCATGY 1 cut(s) 1435
OliI CACNNNNGTG 1 cut(s) 1183
PagI TCATGA 1 cut(s) 702
PceI AGGCCT 1 cut(s) 1077
PciI ACATGT 1 cut(s) 1431
PcsI WCGNNNNNNNCGW 1 cut(s) 2652
PfeI GAWTC 6 cut(s) 383, 1280, 1634, 2381, 2669, 2747
PflFI GACNNNGTC 1 cut(s) 1532
PflMI CCANNNNNTGG 2 cut(s) 1187, 2140
PleI GAGTC 9 cut(s) 161, 524, 617, 885, 1930, 1962, 2038, 2568, 2642
PpsI GAGTC 9 cut(s) 161, 524, 617, 885, 1930, 1962, 2038, 2568, 2642
PpuMI RGGWCCY 2 cut(s) 245, 1714
PscI ACATGT 1 cut(s) 1431
PshBI ATTAAT 1 cut(s) 1785
Psp5II RGGWCCY 2 cut(s) 245, 1714
Psp6I CCWGG 2 cut(s) 573, 1273
PspEI GGTNACC 2 cut(s) 1176, 1455
PspFI CCCAGC 1 cut(s) 2792
PspGI CCWGG 2 cut(s) 573, 1273
PspN4I GGNNCC 6 cut(s) 133, 247, 303, 967, 1260, 1715
PspPI GGNCC 8 cut(s) 131, 208, 245, 1259, 1534, 1714, 1802, 2467
PspPPI RGGWCCY 2 cut(s) 245, 1714
PstI CTGCAG 2 cut(s) 199, 2668
PsuI RGATCY 3 cut(s) 1003, 1598, 2730
PsyI GACNNNGTC 1 cut(s) 1532
RsaI GTAC 8 cut(s) 629, 792, 1063, 1507, 1519, 1999, 2219, 2265
RsaNI GTAC 8 cut(s) 628, 791, 1062, 1506, 1518, 1998, 2218, 2264
RseI CAYNNNNRTG 3 cut(s) 29, 98, 1183
SaqAI TTAA 8 cut(s) 162, 417, 590, 716, 1785, 1970, 2018, 2103
Sau96I GGNCC 8 cut(s) 131, 208, 245, 1259, 1534, 1714, 1802, 2467
ScaI AGTACT 2 cut(s) 1063, 2219
SchI GAGTC 9 cut(s) 161, 525, 618, 885, 1930, 1963, 2039, 2569, 2642
ScrFI CCNGG 2 cut(s) 575, 1275
SduI GDGCHC 4 cut(s) 306, 772, 2569, 2663
SfaNI GCATC 8 cut(s) 33, 178, 487, 588, 895, 1210, 1552, 2361
SfcI CTRYAG 3 cut(s) 195, 2178, 2664
SinI GGWCC 6 cut(s) 131, 208, 245, 1259, 1534, 1714
SmiMI CAYNNNNRTG 3 cut(s) 29, 98, 1183
SmlI CTYRAG 4 cut(s) 390, 727, 2568, 2610
SmoI CTYRAG 4 cut(s) 390, 727, 2568, 2610
SpeI ACTAGT 1 cut(s) 1508
Sse9I AATT 8 cut(s) 61, 276, 411, 754, 1164, 1555, 1584, 2449
SseBI AGGCCT 1 cut(s) 1077
SsiI CCGC 9 cut(s) 192, 1082, 1572, 1678, 2062, 2465, 2679, 2703, 2763
SspMI CTAG 5 cut(s) 773, 1065, 1217, 1509, 2097
StuI AGGCCT 1 cut(s) 1077
StyD4I CCNGG 2 cut(s) 573, 1273
StyI CCWWGG 4 cut(s) 489, 924, 2235, 2392
TaaI ACNGT 3 cut(s) 1185, 1229, 2686
TaiI ACGT 3 cut(s) 696, 2295, 2712
TaqI TCGA 9 cut(s) 514, 635, 1008, 1560, 2282, 2322, 2472, 2646, 2772
TaqII GACCGA 1 cut(s) 1276
TasI AATT 8 cut(s) 61, 276, 411, 754, 1164, 1555, 1584, 2449
TatI WGTACW 2 cut(s) 1061, 2217
TauI GCSGC 7 cut(s) 194, 1574, 1680, 2468, 2682, 2706, 2766
TfiI GAWTC 6 cut(s) 383, 1280, 1634, 2381, 2669, 2747
Tru1I TTAA 8 cut(s) 162, 417, 590, 716, 1785, 1970, 2018, 2103
Tru9I TTAA 8 cut(s) 162, 417, 590, 716, 1785, 1970, 2018, 2103
TscAI CASTG 6 cut(s) 36, 72, 1190, 1420, 2515, 2641
TseFI GTSAC 6 cut(s) 1176, 1393, 1411, 2129, 2293, 2506
TseI GCWGC 9 cut(s) 90, 194, 197, 200, 371, 908, 1574, 2171, 2174
Tsp45I GTSAC 6 cut(s) 1176, 1393, 1411, 2129, 2293, 2506
TspGWI ACGGA 3 cut(s) 509, 815, 2163
TspRI CASTG 6 cut(s) 36, 72, 1190, 1420, 2515, 2641
Tth111I GACNNNGTC 1 cut(s) 1532
Van91I CCANNNNNTGG 2 cut(s) 1187, 2140
VpaK11BI GGWCC 6 cut(s) 131, 208, 245, 1259, 1534, 1714
VspI ATTAAT 1 cut(s) 1785
XapI RAATTY 2 cut(s) 1555, 2449
XceI RCATGY 1 cut(s) 1435
XcmI CCANNNNNNNNNTGG 1 cut(s) 2233
XspI CTAG 5 cut(s) 773, 1065, 1217, 1509, 2097
ZrmI AGTACT 2 cut(s) 1063, 2219
Zsp2I ATGCAT 2 cut(s) 1567, 1687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.