Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

43636432 .. 43638641

Gene Structure 2210 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00198330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGGCAGTTGAAGACGTTGGGATTACAAACTCTGGCTTCAAAAACTCAAATGCTTCCTTCAACTCAACAGATCTTGATACTCTTAAGGTATCTCAATATGGTCCGAAACTTGCTCAAGCATTGTCAAGTACTAGATTCAACGGCTTAGCTGGAGACGTTAGCCTCATTGATGGGCAGCTTCAATCATCCACTTTTACGATAGTCAATATAAATGGGGATGTAGCAAGAGGAGTTGGATTTTGGACATTACAAAGTGGAATCAAGAAAACATTGGGTCAATCCTCCGCAAACTGTTCAACATTGAATTGCAATCTTGGCCCAATTATATGGCCCGGGAGATTCCTTCTCTGTTCCCAAGGGATGGGAGATTCCGACAAATGGCAAGAAGATGGCTTTACTGAGTTTGTCAAGGTAACCAAAGATCCAAGTACCAACAGAACAGATATCACTGGGTTTAGTATCGACGTGTTTAAGGCTGCGGTGGAATTGCTACCATATGCTCTTCCTTATGAGTTGATTCCATTTGCAAAGCCTGATGGCACCAGTGCAGGCACTTACAATGATTTAGTCTATCAAGTATTTCTTGCGACATTTGATGCTGTGGTGGGGGATACAACAATCCGAGCAAATAGGTCCTTGTATGTGGACTTTTCAATGCCGTATACGGAATCTGGTATTGTGATGGTTGTGCCAATAGTAGACACTAGAAGTAAAAATGCATGGGCTTTCTTGAAACCTTTGACATGGGACCTTTGGCTCACGATTTCTTGTTTCTTGGTCTTTATTGGTTTTGTGGTGTGGGTTCTTGAACATCGAATTAATGACGATTTTCGTGGCCCTCCCCTACATCAGGTCGGCACCAGCATCTGGTTCTCTTTCTCCACAATGGTTTTTGCACAGAGGGAGAAAGTGGTTAGTAACTTGGCCAGATTCGTGATGATAATATGGGTATTTGTAATGCTAATCCTGACCCAAAGTTACACAGCTAGTTTAGCATCACTGTTAACTGTCCAACAACTCCACCCTATTGTCACCGATATAAAGGATCTGTTAAGGAACGGGGATACCGTCGGATACGCAGAGAATACATACGTTTACAATGTCTTGAGAGAAGTAGGTTTTGATGATTCGAAAGTTAAGGAGTTTAAATCTACGGAAGATTTGGATGCTCTTCTTTCGAAAGGAAGTGCAAATGGTGGGATTGCTGCTGCAATTGATGAAACACCCAACATGAAGGTCTTTCCAAAACGCTCCCCGCTTATACCAGATATTTCGCATGCAGTTCTAAGTGTGACCGAAGGAGAGAAGATACTTGACTTTGAAAATAAATGGTTCAAGAAAGATAGTAACTGTGAAGACTTGAGTGCCCCAAAAGTGTCTAGCTATAGTCTTGGCCTTGAGAGCTTTTGGGGCCTATTCCTCGTTGCCGGAGTGGCTTCAATAATTGCTCTTGTCATTTTTTTTGCTTCATTCACATACAGGCATAAACACATCTTGGTGCACCCTGATTCAAGAGCATCGACATGGGGAAGGATTCGGGTCATGTTCAAAATTTTCAATGAAAAAGACCTCGACTGTCATACATTCAAAAGTAGTCCACCACATGATTCAGTTAAGGCGTCACCAAACAACTTCCCAGAAAGTCCACTTAGCTATAATACAAACCAGACTGATAGGAATCTTGTGTTCTTTGGAGAGCAACAAACTCCATCAACGGGTCAAGCGTCTCCTGAAGTAAATTTTGAAGAGCTTTCTTTTGCATTTCCAGAAGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

591

Amino Acids

65.48

Weight (kDa)

5.2

Isoelectric Point (pI)

27.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	6 - 73	4.8e-07	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	140 - 230	9.2e-07	Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan	PF00060	248 - 479	2.7e-38	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	539, 857
AccB7I	CCANNNNNTGG	2 cut(s)	361, 867
AccI	GTMKAC	2 cut(s)	662, 699
AciI	CCGC	3 cut(s)	285, 479, 1256
AclWI	GGATC	2 cut(s)	416, 1053
AcoI	YGGCCR	1 cut(s)	924
AcsI	RAATTY	2 cut(s)	1551, 1738
AcuI	CTGAAG	1 cut(s)	1752
AcyI	GRCGYC	1 cut(s)	1619
AfaI	GTAC	2 cut(s)	130, 430
AfiI	CCNNNNNNNGG	5 cut(s)	361, 378, 850, 867, 1715
AflII	CTTAAG	1 cut(s)	83
AflIII	ACRYGT	1 cut(s)	465
AjiI	CACGTC	1 cut(s)	466
AluBI	AGCT	7 cut(s)	149, 178, 986, 1383, 1404, 1653, 1750
AluI	AGCT	7 cut(s)	149, 178, 986, 1383, 1404, 1653, 1750
Alw21I	GWGCWC	1 cut(s)	1503
Alw26I	GTCTC	2 cut(s)	147, 1731
Alw44I	GTGCAC	1 cut(s)	1499
AlwI	GGATC	2 cut(s)	416, 1053
AlwNI	CAGNNNCTG	1 cut(s)	867
Ama87I	CYCGRG	1 cut(s)	332
AoxI	GGCC	6 cut(s)	316, 329, 835, 924, 1393, 1411
ApaLI	GTGCAC	1 cut(s)	1499
ApeKI	GCWGC	4 cut(s)	175, 476, 1205, 1208
ApoI	RAATTY	2 cut(s)	1551, 1738
AseI	ATTAAT	1 cut(s)	819
AspS9I	GGNCC	7 cut(s)	101, 317, 330, 633, 748, 836, 1411
AsuC2I	CCSGG	2 cut(s)	333, 334
AsuHPI	GGTGA	2 cut(s)	1024, 1614
AsuII	TTCGAA	2 cut(s)	1130, 1178
AvaI	CYCGRG	1 cut(s)	332
AvaII	GGWCC	3 cut(s)	101, 633, 748
BaeGI	GKGCMC	2 cut(s)	1369, 1503
BalI	TGGCCA	1 cut(s)	926
BanI	GGYRCC	2 cut(s)	539, 857
BbsI	GAAGAC	2 cut(s)	18, 1362
Bbv12I	GWGCWC	1 cut(s)	1503
BbvI	GCAGC	4 cut(s)	187, 463, 1192, 1195
BccI	CCATC	6 cut(s)	164, 355, 383, 530, 676, 1717
BceAI	ACGGC	2 cut(s)	157, 643
BciVI	GTATCC	3 cut(s)	604, 1057, 1067
BcnI	CCSGG	2 cut(s)	333, 334
BcoDI	GTCTC	2 cut(s)	147, 1731
BfaI	CTAG	4 cut(s)	132, 705, 987, 1380
BfmI	CTRYAG	1 cut(s)	1384
BfrI	CTTAAG	1 cut(s)	83
BfuI	GTATCC	3 cut(s)	604, 1057, 1067
BglI	GCCNNNNNGGC	1 cut(s)	1433
BglII	AGATCT	1 cut(s)	70
BisI	GCNGC	4 cut(s)	176, 477, 1206, 1209
BlpI	GCTNAGC	1 cut(s)	145
BlsI	GCNGC	4 cut(s)	177, 478, 1207, 1210
BmcAI	AGTACT	1 cut(s)	130
Bme1390I	CCNGG	2 cut(s)	333, 334
Bme18I	GGWCC	3 cut(s)	101, 633, 748
BmeT110I	CYCGRG	1 cut(s)	332
BmgBI	CACGTC	1 cut(s)	466
BmgT120I	GGNCC	7 cut(s)	101, 317, 330, 633, 748, 836, 1411
BmiI	GGNNCC	4 cut(s)	541, 749, 859, 1412
BmrFI	CCNGG	2 cut(s)	333, 334
BmrI	ACTGGG	1 cut(s)	459
BmsI	GCATC	5 cut(s)	586, 873, 1004, 1156, 1526
BmuI	ACTGGG	1 cut(s)	459
BpiI	GAAGAC	2 cut(s)	18, 1362
BpmI	CTGGAG	1 cut(s)	171
Bpu1102I	GCTNAGC	1 cut(s)	145
Bpu14I	TTCGAA	2 cut(s)	1130, 1178
BpuEI	CTTGAG	4 cut(s)	99, 1126, 1381, 1418
BpuMI	CCSGG	2 cut(s)	333, 334
BsaBI	GATNNNNATC	1 cut(s)	1677
BsaHI	GRCGYC	1 cut(s)	1619
BsaJI	CCNNGG	2 cut(s)	332, 355
Bsc4I	CCNNNNNNNGG	5 cut(s)	361, 378, 850, 867, 1715
Bse1I	ACTGG	2 cut(s)	454, 543
Bse8I	GATNNNNATC	1 cut(s)	1677
BseDI	CCNNGG	2 cut(s)	332, 355
BseGI	GGATG	4 cut(s)	185, 223, 366, 1171
BseJI	GATNNNNATC	1 cut(s)	1677
BseLI	CCNNNNNNNGG	5 cut(s)	361, 378, 850, 867, 1715
BseMII	CTCAG	1 cut(s)	390
BseNI	ACTGG	2 cut(s)	454, 543
BseRI	GAGGAG	1 cut(s)	243
BseSI	GKGCMC	2 cut(s)	1369, 1503
BseXI	GCAGC	4 cut(s)	187, 463, 1192, 1195
BsgI	GTGCAG	1 cut(s)	567
BshFI	GGCC	6 cut(s)	318, 331, 837, 926, 1395, 1413
BshNI	GGYRCC	2 cut(s)	539, 857
BsiHKAI	GWGCWC	1 cut(s)	1503
BsiHKCI	CYCGRG	1 cut(s)	332
BsiSI	CCGG	2 cut(s)	333, 1428
BslFI	GGGAC	1 cut(s)	761
BslI	CCNNNNNNNGG	5 cut(s)	361, 378, 850, 867, 1715
BsmAI	GTCTC	2 cut(s)	147, 1731
BsmBI	CGTCTC	2 cut(s)	147, 1731
BsmFI	GGGAC	1 cut(s)	761
BsnI	GGCC	6 cut(s)	318, 331, 837, 926, 1395, 1413
BsoBI	CYCGRG	1 cut(s)	332
Bsp119I	TTCGAA	2 cut(s)	1130, 1178
Bsp1286I	GDGCHC	2 cut(s)	1369, 1503
Bsp143I	GATC	3 cut(s)	70, 421, 1045
Bsp1720I	GCTNAGC	1 cut(s)	145
BspACI	CCGC	3 cut(s)	285, 479, 1256
BspANI	GGCC	6 cut(s)	318, 331, 837, 926, 1395, 1413
BspCNI	CTCAG	1 cut(s)	391
BspLI	GGNNCC	4 cut(s)	541, 749, 859, 1412
BspPI	GGATC	2 cut(s)	416, 1053
BspQI	GCTCTTC	3 cut(s)	507, 1176, 1740
BspT104I	TTCGAA	2 cut(s)	1130, 1178
BspT107I	GGYRCC	2 cut(s)	539, 857
BspTI	CTTAAG	1 cut(s)	83
BsrI	ACTGG	2 cut(s)	454, 543
BssECI	CCNNGG	2 cut(s)	332, 355
BssMI	GATC	3 cut(s)	70, 421, 1045
BssNAI	GTATAC	1 cut(s)	663
BssNI	GRCGYC	1 cut(s)	1619
BssT1I	CCWWGG	1 cut(s)	355
Bst1107I	GTATAC	1 cut(s)	663
Bst4CI	ACNGT	6 cut(s)	293, 1002, 1009, 1069, 1352, 1577
Bst6I	CTCTTC	3 cut(s)	507, 1176, 1740
BstACI	GRCGYC	1 cut(s)	1619
BstAFI	CTTAAG	1 cut(s)	83
BstBI	TTCGAA	2 cut(s)	1130, 1178
BstC8I	GCNNGC	2 cut(s)	550, 1278
BstDEI	CTNAG	4 cut(s)	145, 399, 1286, 1649
BstEII	GGTNACC	1 cut(s)	412
BstENI	CCTNNNNNAGG	1 cut(s)	848
BstF5I	GGATG	4 cut(s)	185, 223, 366, 1171
BstKTI	GATC	3 cut(s)	73, 424, 1048
BstMAI	GTCTC	2 cut(s)	147, 1731
BstMBI	GATC	3 cut(s)	70, 421, 1045
BstMWI	GCNNNNNNNGC	5 cut(s)	315, 992, 1401, 1410, 1433
BstNSI	RCATGY	1 cut(s)	1280
BstPI	GGTNACC	1 cut(s)	412
BstSCI	CCNGG	2 cut(s)	331, 332
BstSFI	CTRYAG	1 cut(s)	1384
BstSLI	GKGCMC	2 cut(s)	1369, 1503
BstV1I	GCAGC	4 cut(s)	187, 463, 1192, 1195
BstV2I	GAAGAC	2 cut(s)	18, 1362
BstX2I	RGATCY	3 cut(s)	70, 421, 1045
BstXI	CCANNNNNNTGG	1 cut(s)	327
BstYI	RGATCY	3 cut(s)	70, 421, 1045
BstZ17I	GTATAC	1 cut(s)	663
BsuI	GTATCC	3 cut(s)	604, 1057, 1067
BsuRI	GGCC	6 cut(s)	318, 331, 837, 926, 1395, 1413
BtrI	CACGTC	1 cut(s)	466
BtsCI	GGATG	4 cut(s)	185, 223, 366, 1171
BtsIMutI	CAGTG	3 cut(s)	447, 550, 998
Cac8I	GCNNGC	2 cut(s)	550, 1278
CaiI	CAGNNNCTG	1 cut(s)	867
Cfr13I	GGNCC	7 cut(s)	101, 317, 330, 633, 748, 836, 1411
Cfr9I	CCCGGG	1 cut(s)	332
CseI	GACGC	2 cut(s)	1608, 1713
Csp6I	GTAC	2 cut(s)	129, 429
CviAII	CATG	7 cut(s)	720, 744, 1231, 1277, 1524, 1543, 1604
CviQI	GTAC	2 cut(s)	129, 429
DdeI	CTNAG	4 cut(s)	145, 399, 1286, 1649
DpnI	GATC	3 cut(s)	72, 423, 1047
DpnII	GATC	3 cut(s)	70, 421, 1045
DraI	TTTAAA	1 cut(s)	1147
EaeI	YGGCCR	1 cut(s)	924
Eam1104I	CTCTTC	3 cut(s)	507, 1176, 1740
EarI	CTCTTC	3 cut(s)	507, 1176, 1740
Eco130I	CCWWGG	1 cut(s)	355
Eco32I	GATATC	1 cut(s)	445
Eco47I	GGWCC	3 cut(s)	101, 633, 748
Eco57I	CTGAAG	1 cut(s)	1752
Eco88I	CYCGRG	1 cut(s)	332
Eco91I	GGTNACC	1 cut(s)	412
EcoNI	CCTNNNNNAGG	1 cut(s)	848
EcoO109I	RGGNCCY	3 cut(s)	633, 748, 1411
EcoO65I	GGTNACC	1 cut(s)	412
EcoRV	GATATC	1 cut(s)	445
EcoT14I	CCWWGG	1 cut(s)	355
EcoT22I	ATGCAT	1 cut(s)	721
ErhI	CCWWGG	1 cut(s)	355
Esp3I	CGTCTC	2 cut(s)	147, 1731
FaeI	CATG	7 cut(s)	723, 747, 1234, 1280, 1527, 1546, 1607
FalI	AAGNNNNNCTT	2 cut(s)	567, 599
FaqI	GGGAC	1 cut(s)	761
FatI	CATG	7 cut(s)	719, 743, 1230, 1276, 1523, 1542, 1603
FauI	CCCGC	1 cut(s)	1263
FauNDI	CATATG	1 cut(s)	496
FblI	GTMKAC	2 cut(s)	662, 699
Fnu4HI	GCNGC	4 cut(s)	176, 477, 1206, 1209
FokI	GGATG	4 cut(s)	172, 230, 373, 1178
Fsp4HI	GCNGC	4 cut(s)	176, 477, 1206, 1209
FspBI	CTAG	4 cut(s)	132, 705, 987, 1380
GluI	GCNGC	4 cut(s)	176, 477, 1206, 1209
GsuI	CTGGAG	1 cut(s)	171
HaeIII	GGCC	6 cut(s)	318, 331, 837, 926, 1395, 1413
HapII	CCGG	2 cut(s)	333, 1428
HgaI	GACGC	2 cut(s)	1608, 1713
Hin1I	GRCGYC	1 cut(s)	1619
Hin1II	CATG	7 cut(s)	723, 747, 1234, 1280, 1527, 1546, 1607
HincII	GTYRAC	1 cut(s)	1005
HindII	GTYRAC	1 cut(s)	1005
HpaI	GTTAAC	1 cut(s)	1005
HpaII	CCGG	2 cut(s)	333, 1428
HphI	GGTGA	2 cut(s)	1024, 1614
Hpy166II	GTNNAC	8 cut(s)	646, 663, 700, 1005, 1096, 1501, 1598, 1646
Hpy188I	TCNGA	4 cut(s)	105, 373, 623, 1073
Hpy8I	GTNNAC	8 cut(s)	646, 663, 700, 1005, 1096, 1501, 1598, 1646
Hpy99I	CGWCG	2 cut(s)	467, 1073
HpyAV	CCTTC	5 cut(s)	67, 353, 1228, 1292, 1524
HpyCH4III	ACNGT	6 cut(s)	293, 1002, 1009, 1069, 1352, 1577
HpyCH4IV	ACGT	4 cut(s)	15, 156, 465, 1092
HpyF10VI	GCNNNNNNNGC	5 cut(s)	315, 992, 1401, 1410, 1433
HpyF3I	CTNAG	4 cut(s)	145, 399, 1286, 1649
HpySE526I	ACGT	4 cut(s)	15, 156, 465, 1092
Hsp92I	GRCGYC	1 cut(s)	1619
Hsp92II	CATG	7 cut(s)	723, 747, 1234, 1280, 1527, 1546, 1607
KspAI	GTTAAC	1 cut(s)	1005
Kzo9I	GATC	3 cut(s)	70, 421, 1045
LguI	GCTCTTC	3 cut(s)	507, 1176, 1740
LmnI	GCTCC	1 cut(s)	1256
Lsp1109I	GCAGC	4 cut(s)	187, 463, 1192, 1195
LweI	GCATC	5 cut(s)	586, 873, 1004, 1156, 1526
MaeI	CTAG	4 cut(s)	132, 705, 987, 1380
MaeII	ACGT	4 cut(s)	15, 156, 465, 1092
MaeIII	GTNAC	7 cut(s)	412, 917, 977, 1030, 1291, 1346, 1620
MalI	GATC	3 cut(s)	72, 423, 1047
MboI	GATC	3 cut(s)	70, 421, 1045
MboII	GAAGA	8 cut(s)	23, 398, 494, 1163, 1169, 1318, 1367, 1757
MfeI	CAATTG	1 cut(s)	1212
MflI	RGATCY	3 cut(s)	70, 421, 1045
MhlI	GDGCHC	2 cut(s)	1369, 1503
MlsI	TGGCCA	1 cut(s)	926
MluCI	AATT	8 cut(s)	304, 321, 485, 816, 1212, 1443, 1551, 1738
MluNI	TGGCCA	1 cut(s)	926
MmeI	TCCRAC	4 cut(s)	214, 396, 1036, 1051
MnlI	CCTC	7 cut(s)	173, 221, 292, 849, 894, 1430, 1580
Mox20I	TGGCCA	1 cut(s)	926
Mph1103I	ATGCAT	1 cut(s)	721
MscI	TGGCCA	1 cut(s)	926
MseI	TTAA	8 cut(s)	84, 471, 819, 1004, 1052, 1137, 1146, 1614
MslI	CAYNNNNRTG	2 cut(s)	1496, 1522
Msp20I	TGGCCA	1 cut(s)	926
MspCI	CTTAAG	1 cut(s)	83
MspI	CCGG	2 cut(s)	333, 1428
MspR9I	CCNGG	2 cut(s)	333, 334
MunI	CAATTG	1 cut(s)	1212
MwoI	GCNNNNNNNGC	5 cut(s)	315, 992, 1401, 1410, 1433
NciI	CCSGG	2 cut(s)	333, 334
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	3 cut(s)	70, 421, 1045
NlaIII	CATG	7 cut(s)	723, 747, 1234, 1280, 1527, 1546, 1607
NlaIV	GGNNCC	4 cut(s)	541, 749, 859, 1412
NmuCI	GTSAC	3 cut(s)	1030, 1291, 1620
NsiI	ATGCAT	1 cut(s)	721
NspI	RCATGY	1 cut(s)	1280
NspV	TTCGAA	2 cut(s)	1130, 1178
PaeI	GCATGC	1 cut(s)	1280
PciSI	GCTCTTC	3 cut(s)	507, 1176, 1740
PcsI	WCGNNNNNNNCGW	2 cut(s)	1065, 1721
PflMI	CCANNNNNTGG	2 cut(s)	361, 867
PkrI	GCNGC	4 cut(s)	177, 478, 1207, 1210
PpuMI	RGGWCCY	2 cut(s)	633, 748
PshBI	ATTAAT	1 cut(s)	819
Psp5II	RGGWCCY	2 cut(s)	633, 748
PspEI	GGTNACC	1 cut(s)	412
PspN4I	GGNNCC	4 cut(s)	541, 749, 859, 1412
PspPI	GGNCC	7 cut(s)	101, 317, 330, 633, 748, 836, 1411
PspPPI	RGGWCCY	2 cut(s)	633, 748
PstNI	CAGNNNCTG	1 cut(s)	867
PsuI	RGATCY	3 cut(s)	70, 421, 1045
RsaI	GTAC	2 cut(s)	130, 430
RsaNI	GTAC	2 cut(s)	129, 429
RseI	CAYNNNNRTG	2 cut(s)	1496, 1522
SapI	GCTCTTC	3 cut(s)	507, 1176, 1740
SaqAI	TTAA	8 cut(s)	84, 471, 819, 1004, 1052, 1137, 1146, 1614
SatI	GCNGC	4 cut(s)	176, 477, 1206, 1209
Sau3AI	GATC	3 cut(s)	70, 421, 1045
Sau96I	GGNCC	7 cut(s)	101, 317, 330, 633, 748, 836, 1411
ScaI	AGTACT	1 cut(s)	130
ScrFI	CCNGG	2 cut(s)	333, 334
SduI	GDGCHC	2 cut(s)	1369, 1503
SfaNI	GCATC	5 cut(s)	586, 873, 1004, 1156, 1526
SfcI	CTRYAG	1 cut(s)	1384
SfuI	TTCGAA	2 cut(s)	1130, 1178
SinI	GGWCC	3 cut(s)	101, 633, 748
SmaI	CCCGGG	1 cut(s)	334
SmiMI	CAYNNNNRTG	2 cut(s)	1496, 1522
SmlI	CTYRAG	5 cut(s)	83, 114, 1105, 1360, 1397
SmoI	CTYRAG	5 cut(s)	83, 114, 1105, 1360, 1397
SphI	GCATGC	1 cut(s)	1280
Sse9I	AATT	8 cut(s)	304, 321, 485, 816, 1212, 1443, 1551, 1738
SsiI	CCGC	3 cut(s)	285, 479, 1256
SspMI	CTAG	4 cut(s)	132, 705, 987, 1380
StyD4I	CCNGG	2 cut(s)	331, 332
StyI	CCWWGG	1 cut(s)	355
TaaI	ACNGT	6 cut(s)	293, 1002, 1009, 1069, 1352, 1577
TaiI	ACGT	4 cut(s)	18, 159, 468, 1095
TaqI	TCGA	6 cut(s)	462, 814, 1130, 1178, 1520, 1572
TaqII	GACCGA	1 cut(s)	1310
TasI	AATT	8 cut(s)	304, 321, 485, 816, 1212, 1443, 1551, 1738
TatI	WGTACW	1 cut(s)	128
Tru1I	TTAA	8 cut(s)	84, 471, 819, 1004, 1052, 1137, 1146, 1614
Tru9I	TTAA	8 cut(s)	84, 471, 819, 1004, 1052, 1137, 1146, 1614
TscAI	CASTG	3 cut(s)	454, 550, 1005
TseFI	GTSAC	3 cut(s)	1030, 1291, 1620
TseI	GCWGC	4 cut(s)	175, 476, 1205, 1208
Tsp45I	GTSAC	3 cut(s)	1030, 1291, 1620
TspDTI	ATGAA	4 cut(s)	1233, 1247, 1458, 1575
TspGWI	ACGGA	2 cut(s)	680, 1169
TspMI	CCCGGG	1 cut(s)	332
TspRI	CASTG	3 cut(s)	454, 550, 1005
Van91I	CCANNNNNTGG	2 cut(s)	361, 867
Vha464I	CTTAAG	1 cut(s)	83
VneI	GTGCAC	1 cut(s)	1499
VpaK11BI	GGWCC	3 cut(s)	101, 633, 748
VspI	ATTAAT	1 cut(s)	819
XagI	CCTNNNNNAGG	1 cut(s)	848
XapI	RAATTY	2 cut(s)	1551, 1738
XceI	RCATGY	1 cut(s)	1280
XmaI	CCCGGG	1 cut(s)	332
XmiI	GTMKAC	2 cut(s)	662, 699
XspI	CTAG	4 cut(s)	132, 705, 987, 1380
ZrmI	AGTACT	1 cut(s)	130
Zsp2I	ATGCAT	1 cut(s)	721

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.