Rroxscaffold_1G00057500

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
79443444 .. 79447446
4003 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00057500.1

Sequence Viewer

Length: 2634 bp
ATGATGGTTGGGTGGGCGCCTGTGTGCTCTGCTCCTGTCGGTGATTGTAGGGCTGATCCGGGTGGCCATTGGTTTCTCAACTTGCTCTTGGATTCGCTCCTGGCGGCGGTTCTGCGTAGAACACCATGGTTGGGTGATGACAAGCACGCTGATGGGGGCTACCATTTGTTGTTGGTGGCAGCTTTGATCAGAACTGTTTTGGAACTGCATAAATGGTGTCGAGTTCCTATTTTTTTTCGATTTGCACAAAATGACTTGAACCAAGTGAAAGCTATAAGTGGTATTGTTCAAAACTTTGGATGGAGACGAGTTGTGCCCATTTACGTAGACAATATGTACGGGGAAGGAGTCATACCTTTTCTAATTGATGCCTTGCAAGAGGTGGATGCTCATATCCCCCACAGAAGTTTAATTCATGAATTAGCCACTGATGATGAAATTGAAAAAGAGCTTTACAAGTTGGTGACAATGCAGACTCGAGTCTTCATTGTGCATATGATGCCTAATCTTTCGTCTCGCCTATTTGCTAAGGCAAAGGAGATGGGAATGATGAGTGAGGGTTATGTTTGGATCACGACTAATGGTATTGGAAATAATTTACGGTCTATGGCTTCAGTCCTTGATATGATGCAAGGCCTGTTAGGTGTAGAAAGTTATATTCCAAGGACATTGAAGCTTAGACAATTCATATCAAGGTGGAAAAGGCAATTCCAACAAGACAATCCGAAAATCATTGATGTTCAATTAGATTCTTTTGGATTGAGGGCATATGATGCCGCTTTTGCAGTAGCCATGGCATTTGAGAAAGTTGCCAATGTAAGTTTCAAATTCCAAAAGAGGAATGCTTCTTCCTTCAACTCAACAGATCTTGATACTTTTGAGGTCTCTCATTATGGTTCAAAACTTTCTCATGCATTATCCATTATTAATTTCGAAGGTATGGCTGGAAACTTCAATCTTGTTGATAGGCAACTTAATGTATCAACTTTTAAGATTGTTAATGTGAATGGGGATGCACCAAGAACAGTTGGATATTGGACACCAGAAAATGGAAAGGTAGTAAAGCGGTTGAATTCGACAAGAAGTAGAATATCAACTTCCAAGTGTGATCTTCGACCTATTATATGGCCTGGAGAGTCATTATCAGTTCCTAAAGGGTGGGAGATCCCGGCAAACGGTACCAAGTTAAGAATAGGAGTTCCTGTGAAGGATGGTTTTCTAGAGTTTCTTAAAGTAACCAGATATCCAAGCACTAATACAGTGGATGCCACTGGGTTCGTTATTGACGTGTTTAAGGCCGTATTGGAGATCTTACCATATGCACTTCCTTATGAATTTATTCCCTTTGCAAAGGCTAATGGAAGCAGTGCTGGCACATACAATGATTTGGTGTATCAAGTATATGTTGGGAATTTTGATGCTGTGCTTGGAGATGTAACGATTAGAGCAAATAGGTCATTGTATGTGGGCTTTACTATGCCATATACCGAAGTTGATGTAGTGATGGTTGTGCCAATACAAGACAAGAGGACCAAAAGTGCATGGGTTTTCTTGAAGCCTTTGACATGGGACCTTTGGATGACAACTTTGTGTTTTTTCATCTTTATTGGTTTTGTTATTTGGGTGCTTGAACATCGAACTAATGACGATTTTCGTGGCTCTCCCTCGCATCAAATTGGCACAAGCTTCTGGTTCTCTTTCTCAACCATGGTTTTCTCACAAAGGGAGAGAGTGGTTAATAACTTGGCAAGATTTGTGATGATTATATGGATATTCGTTGTGCTAATAGTGACACAGAGCTACACAGCTAGTCTAGCATCACTATTGACGGTCCAACAACTCCAACCAACTATTACCGATATAAATGATCTTTTGAGGAATACAGAAAATGTGGGCTATTTGGCGAATTCTTATATTTATGGTCTCCTGAGACAAAAAGGTTTTCATGATTCCAGGCTTAAAGAATATGGAGATATGGAAGAAATAGATAAAGCTCTTTCAAAGGGGAGTGCAAATGGTGGTATTGCTGCTATTGTATTTCCGAAAGGTTCTCCTCTGATACCCGATGTTTCACAAGCAATCCTCAATTTGACCGAAGGAGAGAAGATAATGAACATTGAAGACAAATGGATCAAAGAAAACAGTTGTAAAGATCCGAGTACCGAGAAATTTTACAGCAGTAGTCTTGGCCTTGAGAGCTTTTGGGTCCTATTTCTCATTGCTGGGGTAGCTTCAATATTTGCTCTCCTCATATTTGCAGCTTCCTTCATTCACAAGCATAAGCAAGTTTTGATGTCTACTGATTCAAGAGCTTCCAAGTGGAAAAGGATTAGGACCATGTTCAAGATTTTCAATGAAAAAGAACTGAGCTCTCGTACATATAAAAGTAGTAGTAAACATGAAGCTAGGATCGCTGGTGCTCCAAATGATGAAGTGAATGCCTCACCAAATGACAACTGGCCCAAAAGTCCATTCAGCTATACAAACCAGACGGATGTGACTTCTGTATTCTATCGACAGCAAGAAACGCCATCGCACGATCCAGTATCTCCGGAAATCGTTCCAACTGTTGAGCTTGCTTTCACTAATCAAGAAATGCATGCAATTCCGGAAACAACTCAAGAAAGAGTATGA

Protein Analysis

877

Amino Acids

99.1

Weight (kDa)

8.0

Isoelectric Point (pI)

35.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 76 - 338 2.7e-52 Receptor family ligand binding region
SBP_bac_3 PF00497 422 - 712 1.3e-07 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 522 - 744 1e-40 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1178
AccB1I GGYRCC 2 cut(s) 16, 1178
AccB7I CCANNNNNTGG 1 cut(s) 1049
AccI GTMKAC 2 cut(s) 327, 2297
AccIII TCCGGA 2 cut(s) 2551, 2608
AciI CCGC 4 cut(s) 104, 107, 777, 1066
AclWI GGATC 7 cut(s) 50, 578, 1159, 2138, 2147, 2417, 2534
AcoI YGGCCR 1 cut(s) 64
AcsI RAATTY 6 cut(s) 827, 1072, 1334, 1411, 1906, 2168
AcuI CTGAAG 1 cut(s) 597
AcyI GRCGYC 1 cut(s) 17
AfaI GTAC 4 cut(s) 338, 1180, 2161, 2377
AfiI CCNNNNNNNGG 4 cut(s) 106, 131, 1049, 1175
AflIII ACRYGT 1 cut(s) 1287
AjiI CACGTC 1 cut(s) 1288
AjnI CCWGG 3 cut(s) 99, 1129, 1952
AjuI GAANNNNNNNTTGG 4 cut(s) 806, 838, 2456, 2488
Alw21I GWGCWC 3 cut(s) 29, 2372, 2422
Alw26I GTCTC 5 cut(s) 298, 519, 889, 1924, 1928
AlwI GGATC 7 cut(s) 50, 578, 1159, 2138, 2147, 2417, 2534
Ama87I CYCGRG 1 cut(s) 477
Aor13HI TCCGGA 2 cut(s) 2551, 2608
AoxI GGCC 6 cut(s) 64, 634, 1127, 1296, 2188, 2459
ApeKI GCWGC 3 cut(s) 179, 2027, 2258
ApoI RAATTY 6 cut(s) 827, 1072, 1334, 1411, 1906, 2168
AseI ATTAAT 1 cut(s) 927
Asp700I GAANNNNTTC 2 cut(s) 1338, 2559
Asp718I GGTACC 1 cut(s) 1178
AspLEI GCGC 1 cut(s) 19
AspS9I GGNCC 6 cut(s) 1530, 1570, 1831, 2206, 2334, 2460
AsuC2I CCSGG 2 cut(s) 60, 1169
AsuHPI GGTGA 4 cut(s) 53, 146, 475, 2436
AsuII TTCGAA 1 cut(s) 933
AvaI CYCGRG 1 cut(s) 477
AvaII GGWCC 5 cut(s) 1530, 1570, 1831, 2206, 2334
BaeGI GKGCMC 1 cut(s) 318
BalI TGGCCA 1 cut(s) 66
BanI GGYRCC 2 cut(s) 16, 1178
BanII GRGCYC 1 cut(s) 2372
BarI GAAGNNNNNNTAC 2 cut(s) 336, 368
BbsI GAAGAC 2 cut(s) 475, 2127
Bbv12I GWGCWC 3 cut(s) 29, 2372, 2422
BbvI GCAGC 3 cut(s) 191, 2014, 2270
BccI CCATC 6 cut(s) 146, 294, 535, 1205, 1498, 2539
BceAI ACGGC 1 cut(s) 1283
BciT130I CCWGG 3 cut(s) 101, 1131, 1954
BclI TGATCA 1 cut(s) 186
BcnI CCSGG 2 cut(s) 60, 1169
BcoDI GTCTC 5 cut(s) 298, 519, 889, 1924, 1928
BfaI CTAG 4 cut(s) 1220, 1809, 1814, 2406
BfoI RGCGCY 1 cut(s) 20
BglII AGATCT 2 cut(s) 865, 1308
BisI GCNGC 5 cut(s) 105, 180, 777, 2028, 2259
BlsI GCNGC 5 cut(s) 106, 181, 778, 2029, 2260
Bme1390I CCNGG 5 cut(s) 60, 101, 1131, 1169, 1954
Bme18I GGWCC 5 cut(s) 1530, 1570, 1831, 2206, 2334
BmeT110I CYCGRG 1 cut(s) 477
BmgBI CACGTC 1 cut(s) 1288
BmgT120I GGNCC 6 cut(s) 1530, 1570, 1831, 2206, 2334, 2460
BmiI GGNNCC 4 cut(s) 18, 1180, 1571, 2207
BmrFI CCNGG 5 cut(s) 60, 101, 1131, 1169, 1954
BmrI ACTGGG 1 cut(s) 1281
BmuI ACTGGG 1 cut(s) 1281
BoxI GACNNNNGTC 1 cut(s) 479
BpiI GAAGAC 2 cut(s) 475, 2127
BpmI CTGGAG 1 cut(s) 1152
Bpu10I CCTNAGC 1 cut(s) 528
Bpu14I TTCGAA 1 cut(s) 933
BpuEI CTTGAG 2 cut(s) 2213, 2604
BpuMI CCSGG 2 cut(s) 60, 1169
BsaAI YACGTR 1 cut(s) 325
BsaHI GRCGYC 1 cut(s) 17
BsaI GGTCTC 2 cut(s) 889, 1928
BsaJI CCNNGG 4 cut(s) 125, 662, 792, 1707
BsaWI WCCGGW 2 cut(s) 2551, 2608
BsaXI ACNNNNNCTCC 2 cut(s) 1188, 1218
Bsc4I CCNNNNNNNGG 4 cut(s) 106, 131, 1049, 1175
Bse1I ACTGG 3 cut(s) 1276, 2462, 2543
Bse3DI GCAATG 1 cut(s) 2217
BseAI TCCGGA 2 cut(s) 2551, 2608
BseBI CCWGG 3 cut(s) 101, 1131, 1954
BseDI CCNNGG 4 cut(s) 125, 662, 792, 1707
BseGI GGATG 7 cut(s) 305, 391, 1018, 1216, 1270, 1584, 2500
BseLI CCNNNNNNNGG 4 cut(s) 106, 131, 1049, 1175
BseMI GCAATG 1 cut(s) 2217
BseMII CTCAG 2 cut(s) 1919, 2357
BseNI ACTGG 3 cut(s) 1276, 2462, 2543
BseRI GAGGAG 2 cut(s) 2043, 2237
BseSI GKGCMC 1 cut(s) 318
BseXI GCAGC 3 cut(s) 191, 2014, 2270
BseYI CCCAGC 1 cut(s) 2222
BshFI GGCC 6 cut(s) 66, 636, 1129, 1298, 2190, 2461
BshNI GGYRCC 2 cut(s) 16, 1178
BsiHKAI GWGCWC 3 cut(s) 29, 2372, 2422
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 4 cut(s) 59, 1169, 2552, 2609
BslFI GGGAC 1 cut(s) 1583
BslI CCNNNNNNNGG 4 cut(s) 106, 131, 1049, 1175
BsmAI GTCTC 5 cut(s) 298, 519, 889, 1924, 1928
BsmBI CGTCTC 2 cut(s) 298, 519
BsmFI GGGAC 1 cut(s) 1583
BsmI GAATGC 2 cut(s) 847, 2443
BsnI GGCC 6 cut(s) 66, 636, 1129, 1298, 2190, 2461
Bso31I GGTCTC 2 cut(s) 889, 1928
BsoBI CYCGRG 1 cut(s) 477
Bsp119I TTCGAA 1 cut(s) 933
Bsp1286I GDGCHC 4 cut(s) 29, 318, 2372, 2422
Bsp13I TCCGGA 2 cut(s) 2551, 2608
Bsp19I CCATGG 3 cut(s) 125, 792, 1707
BspACI CCGC 4 cut(s) 104, 107, 777, 1066
BspANI GGCC 6 cut(s) 66, 636, 1129, 1298, 2190, 2461
BspCNI CTCAG 2 cut(s) 1920, 2358
BspEI TCCGGA 2 cut(s) 2551, 2608
BspHI TCATGA 2 cut(s) 415, 1945
BspLI GGNNCC 4 cut(s) 18, 1180, 1571, 2207
BspPI GGATC 7 cut(s) 50, 578, 1159, 2138, 2147, 2417, 2534
BspT104I TTCGAA 1 cut(s) 933
BspT107I GGYRCC 2 cut(s) 16, 1178
BspTNI GGTCTC 2 cut(s) 889, 1928
BsrDI GCAATG 1 cut(s) 2217
BsrI ACTGG 3 cut(s) 1276, 2462, 2543
BssECI CCNNGG 4 cut(s) 125, 662, 792, 1707
BssNI GRCGYC 1 cut(s) 17
BssT1I CCWWGG 4 cut(s) 125, 662, 792, 1707
Bst2UI CCWGG 3 cut(s) 101, 1131, 1954
Bst4CI ACNGT 8 cut(s) 196, 603, 1027, 1178, 1261, 1831, 2144, 2569
BstACI GRCGYC 1 cut(s) 17
BstAPI GCANNNNNTGC 2 cut(s) 499, 773
BstBAI YACGTR 1 cut(s) 325
BstBI TTCGAA 1 cut(s) 933
BstC8I GCNNGC 4 cut(s) 147, 1372, 2577, 2601
BstDEI CTNAG 4 cut(s) 528, 677, 1928, 2366
BstDSI CCRYGG 3 cut(s) 125, 792, 1707
BstF5I GGATG 7 cut(s) 305, 391, 1018, 1216, 1270, 1584, 2500
BstH2I RGCGCY 1 cut(s) 20
BstHHI GCGC 1 cut(s) 19
BstMAI GTCTC 5 cut(s) 298, 519, 889, 1924, 1928
BstMWI GCNNNNNNNGC 9 cut(s) 499, 773, 782, 1371, 1814, 2196, 2228, 2411, 2527
BstNI CCWGG 3 cut(s) 101, 1131, 1954
BstNSI RCATGY 1 cut(s) 2603
BstPAI GACNNNNGTC 1 cut(s) 479
BstSCI CCNGG 5 cut(s) 58, 99, 1129, 1167, 1952
BstSLI GKGCMC 1 cut(s) 318
BstSNI TACGTA 1 cut(s) 325
BstV1I GCAGC 3 cut(s) 191, 2014, 2270
BstV2I GAAGAC 2 cut(s) 475, 2127
BstX2I RGATCY 4 cut(s) 865, 1164, 1308, 2152
BstYI RGATCY 4 cut(s) 865, 1164, 1308, 2152
BsuRI GGCC 6 cut(s) 66, 636, 1129, 1298, 2190, 2461
BtgI CCRYGG 3 cut(s) 125, 792, 1707
BtgZI GCGATG 1 cut(s) 2517
BtrI CACGTC 1 cut(s) 1288
BtsCI GGATG 7 cut(s) 305, 391, 1018, 1216, 1270, 1584, 2500
BtsI GCAGTG 1 cut(s) 1372
BtsIMutI CAGTG 4 cut(s) 426, 1266, 1269, 1372
Cac8I GCNNGC 4 cut(s) 147, 1372, 2577, 2601
CciI TCATGA 2 cut(s) 415, 1945
CfoI GCGC 1 cut(s) 19
Cfr13I GGNCC 6 cut(s) 1530, 1570, 1831, 2206, 2334, 2460
Csp6I GTAC 4 cut(s) 337, 1179, 2160, 2376
CviQI GTAC 4 cut(s) 337, 1179, 2160, 2376
DdeI CTNAG 4 cut(s) 528, 677, 1928, 2366
DinI GGCGCC 1 cut(s) 18
EaeI YGGCCR 1 cut(s) 64
Ecl136II GAGCTC 1 cut(s) 2370
Eco105I TACGTA 1 cut(s) 325
Eco130I CCWWGG 4 cut(s) 125, 662, 792, 1707
Eco147I AGGCCT 1 cut(s) 636
Eco24I GRGCYC 1 cut(s) 2372
Eco31I GGTCTC 2 cut(s) 889, 1928
Eco32I GATATC 1 cut(s) 1244
Eco47I GGWCC 5 cut(s) 1530, 1570, 1831, 2206, 2334
Eco53kI GAGCTC 1 cut(s) 2370
Eco57I CTGAAG 1 cut(s) 597
Eco88I CYCGRG 1 cut(s) 477
EcoICRI GAGCTC 1 cut(s) 2370
EcoO109I RGGNCCY 2 cut(s) 1570, 2206
EcoRI GAATTC 2 cut(s) 1072, 1906
EcoRII CCWGG 3 cut(s) 99, 1129, 1952
EcoRV GATATC 1 cut(s) 1244
EcoT14I CCWWGG 4 cut(s) 125, 662, 792, 1707
EcoT22I ATGCAT 2 cut(s) 916, 2601
EcoT38I GRGCYC 1 cut(s) 2372
EgeI GGCGCC 1 cut(s) 18
EheI GGCGCC 1 cut(s) 18
ErhI CCWWGG 4 cut(s) 125, 662, 792, 1707
Esp3I CGTCTC 2 cut(s) 298, 519
FaqI GGGAC 1 cut(s) 1583
FauNDI CATATG 3 cut(s) 495, 769, 1318
FbaI TGATCA 1 cut(s) 186
FblI GTMKAC 2 cut(s) 327, 2297
Fnu4HI GCNGC 5 cut(s) 105, 180, 777, 2028, 2259
FokI GGATG 7 cut(s) 312, 398, 1025, 1223, 1277, 1591, 2507
FriOI GRGCYC 1 cut(s) 2372
Fsp4HI GCNGC 5 cut(s) 105, 180, 777, 2028, 2259
FspBI CTAG 4 cut(s) 1220, 1809, 1814, 2406
GlaI GCGC 1 cut(s) 18
GluI GCNGC 5 cut(s) 105, 180, 777, 2028, 2259
GsaI CCCAGC 1 cut(s) 2226
GsuI CTGGAG 1 cut(s) 1152
HaeII RGCGCY 1 cut(s) 20
HaeIII GGCC 6 cut(s) 66, 636, 1129, 1298, 2190, 2461
HapII CCGG 4 cut(s) 59, 1169, 2552, 2609
HhaI GCGC 1 cut(s) 19
Hin1I GRCGYC 1 cut(s) 17
Hin6I GCGC 1 cut(s) 17
HinP1I GCGC 1 cut(s) 17
HindIII AAGCTT 2 cut(s) 674, 1684
HinfI GANTC 8 cut(s) 92, 348, 475, 480, 749, 1136, 1949, 2303
HpaII CCGG 4 cut(s) 59, 1169, 2552, 2609
HphI GGTGA 4 cut(s) 53, 146, 475, 2436
Hpy166II GTNNAC 3 cut(s) 328, 2298, 2396
Hpy188I TCNGA 5 cut(s) 191, 726, 2043, 2058, 2157
Hpy8I GTNNAC 3 cut(s) 328, 2298, 2396
HpyAV CCTTC 6 cut(s) 338, 862, 929, 1201, 2090, 2275
HpyCH4III ACNGT 8 cut(s) 196, 603, 1027, 1178, 1261, 1831, 2144, 2569
HpyCH4IV ACGT 2 cut(s) 324, 1287
HpyF10VI GCNNNNNNNGC 9 cut(s) 499, 773, 782, 1371, 1814, 2196, 2228, 2411, 2527
HpyF3I CTNAG 4 cut(s) 528, 677, 1928, 2366
HpySE526I ACGT 2 cut(s) 324, 1287
Hsp92I GRCGYC 1 cut(s) 17
HspAI GCGC 1 cut(s) 17
KasI GGCGCC 1 cut(s) 16
Kpn2I TCCGGA 2 cut(s) 2551, 2608
KpnI GGTACC 1 cut(s) 1182
Ksp22I TGATCA 1 cut(s) 186
LmnI GCTCC 3 cut(s) 37, 102, 2425
Lsp1109I GCAGC 3 cut(s) 191, 2014, 2270
MaeI CTAG 4 cut(s) 1220, 1809, 1814, 2406
MaeII ACGT 2 cut(s) 324, 1287
MaeIII GTNAC 5 cut(s) 463, 1234, 1435, 1789, 2497
MboII GAAGA 6 cut(s) 475, 840, 1103, 1991, 2116, 2132
MflI RGATCY 4 cut(s) 865, 1164, 1308, 2152
MhlI GDGCHC 4 cut(s) 29, 318, 2372, 2422
MlsI TGGCCA 1 cut(s) 66
MluNI TGGCCA 1 cut(s) 66
Mly113I GGCGCC 1 cut(s) 17
MlyI GAGTC 4 cut(s) 357, 469, 489, 1145
MmeI TCCRAC 5 cut(s) 736, 1009, 1858, 1867, 2588
Mox20I TGGCCA 1 cut(s) 66
Mph1103I ATGCAT 2 cut(s) 916, 2601
MroI TCCGGA 2 cut(s) 2551, 2608
MroXI GAANNNNTTC 2 cut(s) 1338, 2559
MscI TGGCCA 1 cut(s) 66
MslI CAYNNNNRTG 1 cut(s) 150
Msp20I TGGCCA 1 cut(s) 66
MspI CCGG 4 cut(s) 59, 1169, 2552, 2609
MspR9I CCNGG 5 cut(s) 60, 101, 1131, 1169, 1954
Mva1269I GAATGC 2 cut(s) 847, 2443
MvaI CCWGG 3 cut(s) 101, 1131, 1954
MwoI GCNNNNNNNGC 9 cut(s) 499, 773, 782, 1371, 1814, 2196, 2228, 2411, 2527
NarI GGCGCC 1 cut(s) 17
NciI CCSGG 2 cut(s) 60, 1169
NcoI CCATGG 3 cut(s) 125, 792, 1707
NdeI CATATG 3 cut(s) 495, 769, 1318
NlaIV GGNNCC 4 cut(s) 18, 1180, 1571, 2207
NmuCI GTSAC 3 cut(s) 463, 1789, 2497
NsiI ATGCAT 2 cut(s) 916, 2601
NspI RCATGY 1 cut(s) 2603
NspV TTCGAA 1 cut(s) 933
PaeI GCATGC 1 cut(s) 2603
PaeR7I CTCGAG 1 cut(s) 477
PagI TCATGA 2 cut(s) 415, 1945
PceI AGGCCT 1 cut(s) 636
PcsI WCGNNNNNNNCGW 1 cut(s) 1284
PctI GAATGC 2 cut(s) 847, 2443
PdmI GAANNNNTTC 2 cut(s) 1338, 2559
PfeI GAWTC 4 cut(s) 92, 749, 1949, 2303
PflMI CCANNNNNTGG 1 cut(s) 1049
PkrI GCNGC 5 cut(s) 106, 181, 778, 2029, 2260
PleI GAGTC 4 cut(s) 356, 469, 488, 1144
PluTI GGCGCC 1 cut(s) 20
PpsI GAGTC 4 cut(s) 356, 469, 488, 1144
Ppu21I YACGTR 1 cut(s) 325
PpuMI RGGWCCY 2 cut(s) 1570, 2206
PshAI GACNNNNGTC 1 cut(s) 479
PshBI ATTAAT 1 cut(s) 927
Psp124BI GAGCTC 1 cut(s) 2372
Psp5II RGGWCCY 2 cut(s) 1570, 2206
Psp6I CCWGG 3 cut(s) 99, 1129, 1952
PspFI CCCAGC 1 cut(s) 2222
PspGI CCWGG 3 cut(s) 99, 1129, 1952
PspN4I GGNNCC 4 cut(s) 18, 1180, 1571, 2207
PspPI GGNCC 6 cut(s) 1530, 1570, 1831, 2206, 2334, 2460
PspPPI RGGWCCY 2 cut(s) 1570, 2206
PspXI VCTCGAGB 1 cut(s) 477
PsuI RGATCY 4 cut(s) 865, 1164, 1308, 2152
RsaI GTAC 4 cut(s) 338, 1180, 2161, 2377
RsaNI GTAC 4 cut(s) 337, 1179, 2160, 2376
RseI CAYNNNNRTG 1 cut(s) 150
SacI GAGCTC 1 cut(s) 2372
SatI GCNGC 5 cut(s) 105, 180, 777, 2028, 2259
Sau96I GGNCC 6 cut(s) 1530, 1570, 1831, 2206, 2334, 2460
SchI GAGTC 4 cut(s) 357, 469, 489, 1145
ScrFI CCNGG 5 cut(s) 60, 101, 1131, 1169, 1954
SduI GDGCHC 4 cut(s) 29, 318, 2372, 2422
SfoI GGCGCC 1 cut(s) 18
Sfr274I CTCGAG 1 cut(s) 477
SfuI TTCGAA 1 cut(s) 933
SinI GGWCC 5 cut(s) 1530, 1570, 1831, 2206, 2334
SlaI CTCGAG 1 cut(s) 477
SmiMI CAYNNNNRTG 1 cut(s) 150
SmlI CTYRAG 3 cut(s) 477, 2192, 2619
SmoI CTYRAG 3 cut(s) 477, 2192, 2619
SnaBI TACGTA 1 cut(s) 325
SphI GCATGC 1 cut(s) 2603
SseBI AGGCCT 1 cut(s) 636
SsiI CCGC 4 cut(s) 104, 107, 777, 1066
SspDI GGCGCC 1 cut(s) 16
SspI AATATT 1 cut(s) 2238
SspMI CTAG 4 cut(s) 1220, 1809, 1814, 2406
SstI GAGCTC 1 cut(s) 2372
StuI AGGCCT 1 cut(s) 636
StyD4I CCNGG 5 cut(s) 58, 99, 1129, 1167, 1952
StyI CCWWGG 4 cut(s) 125, 662, 792, 1707
TaaI ACNGT 8 cut(s) 196, 603, 1027, 1178, 1261, 1831, 2144, 2569
TaiI ACGT 2 cut(s) 327, 1290
TaqI TCGA 8 cut(s) 220, 238, 478, 933, 1076, 1114, 1636, 2515
TaqII GACCGA 1 cut(s) 2108
TauI GCSGC 2 cut(s) 107, 779
TfiI GAWTC 4 cut(s) 92, 749, 1949, 2303
TscAI CASTG 4 cut(s) 433, 1266, 1276, 1372
TseFI GTSAC 3 cut(s) 463, 1789, 2497
TseI GCWGC 3 cut(s) 179, 2027, 2258
Tsp45I GTSAC 3 cut(s) 463, 1789, 2497
TspGWI ACGGA 1 cut(s) 2507
TspRI CASTG 4 cut(s) 433, 1266, 1276, 1372
Van91I CCANNNNNTGG 1 cut(s) 1049
VpaK11BI GGWCC 5 cut(s) 1530, 1570, 1831, 2206, 2334
VspI ATTAAT 1 cut(s) 927
XapI RAATTY 6 cut(s) 827, 1072, 1334, 1411, 1906, 2168
XbaI TCTAGA 1 cut(s) 1219
XceI RCATGY 1 cut(s) 2603
XcmI CCANNNNNNNNNTGG 1 cut(s) 2454
XhoI CTCGAG 1 cut(s) 477
XmiI GTMKAC 2 cut(s) 327, 2297
XmnI GAANNNNTTC 2 cut(s) 1338, 2559
XspI CTAG 4 cut(s) 1220, 1809, 1814, 2406
Zsp2I ATGCAT 2 cut(s) 916, 2601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.