Rw6G014600

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
27037785 .. 27052123
14339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G014600.1

Sequence Viewer

Length: 2481 bp
ATGAAGAAGACGAAACCTACCAACTACCTAACTTGTTCTTTCTTACTCTTCCTTGTATCTCTTAATTTTTCCTTGGCCATAGCCGTTAAGCAGAACACAAGTACTATCGCAGTTAATGTCGGTGTAATTCTTGATGATCTTGATTCAATAACTGCAAAAGTTTGGTTAAGCTGCATCAGCATGGCCCTCTCAGACTTTCATACCTCTCCTGATTCCAGTAAGTCGACGAGGCTGGTTTTGAACATTCGGGACTCTAGAGCAGATGTTGTGGATGCAGCTGCTGCAGGTTTGGATTTAATAAAGAATGTTCAAGTGCAAGCAATAATTGGACCAAAATCATCAATGCAAGCCAACTTTCTAATTGATCTTGGAGAAAAAGCTCAGGTTCCCTTAATCTCATTTTTGGCAACAAGTCCTTCCCTTAGTTCCAAAGGTAGTCCATATTTTTTTCGAGCAACAGAAATTGATTCCTCTCAAGTAAGAGCCATAAGTGATATCATCAAAAGTTTTGGATGGAGAGAAGCTGTGCCAATCTATGTAGACAATCAGTTTGGAGAGGGAGTATTACCTTACTTGGTTGATGCCTTGCAACAAGTCAAGGCTCGTGTCCCTTACCGAAGTGTCATACCCCCAATGTCCACTGATGACCAACTTGTTGCAGAGCTTTACAAATTGATGACAATGCAAACTCGAGTCTTCATTGTCCACATGTCTTATGATCTTGGTTCTCGAGTTTTTGGCAAAGCACGAGAGCTAGGAATGATGAATGAAGGCTATGTTTGGATCATGACTGATGGATTAACCAATTATTTAAGTACATTGAATGATTCAGTCATGAATTCCATGGAAGGCACATTAGGAGTGAGGCCTTATGTGCCAAGAACAAAAGAACTCATCGACTTTCGAGTACGATGGAGAAGGAAATTCCAACAGGAAAATCCAGCCATTGATACTGCCGAATTAGATTTCTTTGGACTTTGGGCTTATGATGCTGCTTATGCATTAGCCACGGCAATTGAAAATGTTGGCACTACAATATTTGGCTTCCAAAACACTACCAGCAATACCTCCATGATCAACTCATCAATTGATCTTGAAACTTTTAGGGTCTCCCAAAGTGGCCAACTACTTCGCCAATCCTTGTCACGTACTAGATTTAAAGGTCTAACTGGAGATTTCAGTTTTGTTAATGGGGAGTTACAATCTTCAGCATTCGAAATAGTGAATGTGAATGGTGATGGAGCAGTAAGAACTATTGGATTTTGGACATCACAGGGTGGACTTTTGAAAAAGATTTCACTCAATTCTACAAACGCAAACAATGTGGGATTGGGATCTATTATATGGCCCGGAGATTCTACCTCTATTCCGAAGGGATGGGAGATCCCCACAAATGAGAAAAAGTTGAGAGTAGGAGTTCCTGTGGATAATGGTTTTCCTGAATTTGTTAAGGTGGTACTTGATCCCATCACAAATACAACAGAAGCAACTGGTTCGTGTATAGACATATTTAATGCTGCAATACAAAAATTACCATATGCTGTTACTTATGACTTCATTCCCTTTGCTTTGAGCAAGCCTGACGGGACTCCTGCTAGCACATATAATGATTTGGTTCAGCAAGTTTTTCTTGGGAACTTCGACGCTGTAGTAGCAGCGACGACAATTAGAGGAAACAGGTCTTTGTATGTGGACTTCACATTGCCTTTCACTGAATCAGGAGTAGGGATGTTGGTGCTAATGAAAGATCAGAACAAGAGTAAAAATGCATGGTTCTTCTTGCAACCTTTGGCCAAGGACCTTTGGCTCTCAACTGTTTGCTGTTTTATCTTCATAGCTTTTGTGATTTGGTTTCTGGAACATCGTATTAATGAAGACTTTCGCGGAAATCCTTGGCGTCAAATCAGCACAAGCTTTTGGTTTTCATTCTCAACAATCACTTTCTCGCAAAGAGAGAGAGTGGTTAGCAATTCGGCAAGGTTTGTGGTCTACACGGCTAGTCTAACGTCACGATTAACTGTCCAACAACTCCGGCCAACTTATACCGACATAAACGAGCTTATAAACAACAAGGAGTATGTGGGCTACCAGGAGGGTTCTTTTGTATATGAGCTTTTGATACAAAGTGGTTTTGATCCTTCCATGATTAGGGCCAAACTCGTTGATTACCCCCACAGGGTTTATAAATCGATAGATGAGTGTGATGATCTTTTGACAAAAGGCAGCAGAAAAGGTGGTATTTCCGCCGCCATTGACGAAACACCCTTCATTAGGCTTTTTCTTGCAAAATTTTGCCCAAAATATACCATGGTTGGGCCAATATTTAAAACTGATGGTTTTGCCTTCGATTATATGGAGGGTTGGGCTAATTTTAGCCTAACAAATATTTTTTGCAGAACTCTTTTTCTTTTTGAGGTTTGGCCCAGTGGGAGGCTCATCCTCACGCCTTTATTATTCAAAACTATAATAGGGTGGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

826

Amino Acids

92.39

Weight (kDa)

6.53

Isoelectric Point (pI)

29.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 56 - 413 3.3e-88 Receptor family ligand binding region
Peripla_BP_6 PF13458 77 - 344 3.7e-16 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 490 - 579 6.9e-07 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 599 - 731 2e-14 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2063, 2184
Acc36I ACCTGC 1 cut(s) 275
AccI GTMKAC 3 cut(s) 224, 540, 1989
AccII CGCG 1 cut(s) 1884
AciI CCGC 3 cut(s) 1884, 2244, 2247
AclWI GGATC 5 cut(s) 791, 1342, 1378, 1457, 2129
AcoI YGGCCR 4 cut(s) 75, 1120, 1791, 2033
AcsI RAATTY 4 cut(s) 838, 923, 1442, 2288
AcuI CTGAAG 1 cut(s) 1191
AcyI GRCGYC 1 cut(s) 1897
AdeI CACNNNGTG 1 cut(s) 1277
AfaI GTAC 5 cut(s) 103, 817, 909, 1150, 1458
AfiI CCNNNNNNNGG 5 cut(s) 2148, 2176, 2271, 2313, 2430
AflIII ACRYGT 1 cut(s) 708
AgsI TTSAA 8 cut(s) 147, 241, 311, 823, 1019, 1097, 1288, 2458
AjnI CCWGG 1 cut(s) 2088
Alw26I GTCTC 1 cut(s) 1114
AlwI GGATC 5 cut(s) 791, 1342, 1378, 1457, 2129
AlwNI CAGNNNCTG 1 cut(s) 281
Ama87I CYCGRG 2 cut(s) 690, 729
ApeKI GCWGC 8 cut(s) 171, 275, 278, 281, 992, 1517, 1655, 2223
ApoI RAATTY 4 cut(s) 838, 923, 1442, 2288
ArsI GACNNNNNNTTYG 2 cut(s) 533, 565
AseI ATTAAT 1 cut(s) 1869
Asp700I GAANNNNTTC 1 cut(s) 1878
AspS9I GGNCC 7 cut(s) 184, 329, 1347, 1798, 2151, 2315, 2421
AsuC2I CCSGG 1 cut(s) 1350
AsuHPI GGTGA 1 cut(s) 1247
AsuII TTCGAA 1 cut(s) 1215
AsuNHI GCTAGC 1 cut(s) 1595
AvaI CYCGRG 2 cut(s) 690, 729
AvaII GGWCC 2 cut(s) 329, 1798
BalI TGGCCA 3 cut(s) 77, 1122, 1793
BarI GAAGNNNNNNTAC 2 cut(s) 1679, 1711
BauI CACGAG 2 cut(s) 603, 747
BbsI GAAGAC 3 cut(s) 14, 688, 1881
BbvI GCAGC 8 cut(s) 158, 265, 268, 287, 979, 1504, 1667, 2235
BccI CCATC 7 cut(s) 507, 788, 906, 1232, 1371, 1475, 2327
BceAI ACGGC 3 cut(s) 68, 1026, 2010
BcgI CGANNNNNNTGC 2 cut(s) 1476, 1510
BciT130I CCWGG 1 cut(s) 2090
BclI TGATCA 1 cut(s) 1074
BcnI CCSGG 1 cut(s) 1350
BcoDI GTCTC 1 cut(s) 1114
BfaI CTAG 5 cut(s) 255, 755, 1152, 1596, 1998
BfmI CTRYAG 2 cut(s) 282, 1647
BfuAI ACCTGC 1 cut(s) 275
BisI GCNGC 9 cut(s) 172, 276, 279, 282, 993, 1518, 1656, 2224, 2247
BlsI GCNGC 9 cut(s) 173, 277, 280, 283, 994, 1519, 1657, 2225, 2248
BmcAI AGTACT 1 cut(s) 103
Bme1390I CCNGG 2 cut(s) 1350, 2090
Bme18I GGWCC 2 cut(s) 329, 1798
BmeT110I CYCGRG 2 cut(s) 690, 729
BmgT120I GGNCC 7 cut(s) 184, 329, 1347, 1798, 2151, 2315, 2421
BmiI GGNNCC 1 cut(s) 387
BmrFI CCNGG 2 cut(s) 1350, 2090
BmrI ACTGGG 1 cut(s) 2418
BmsI GCATC 4 cut(s) 183, 262, 571, 979
BmtI GCTAGC 1 cut(s) 1599
BmuI ACTGGG 1 cut(s) 2418
BpiI GAAGAC 3 cut(s) 14, 688, 1881
BpmI CTGGAG 1 cut(s) 1191
Bpu10I CCTNAGC 1 cut(s) 381
Bpu14I TTCGAA 1 cut(s) 1215
BpuEI CTTGAG 1 cut(s) 459
BpuMI CCSGG 1 cut(s) 1350
Bsa29I ATCGAT 1 cut(s) 2189
BsaAI YACGTR 1 cut(s) 1148
BsaBI GATNNNNATC 1 cut(s) 1333
BsaHI GRCGYC 1 cut(s) 1897
BsaI GGTCTC 1 cut(s) 1114
BsaJI CCNNGG 6 cut(s) 72, 843, 1008, 1794, 1892, 2307
BsaXI ACNNNNNCTCC 4 cut(s) 546, 576, 1407, 1437
Bsc4I CCNNNNNNNGG 5 cut(s) 2148, 2176, 2271, 2313, 2430
Bse1I ACTGG 4 cut(s) 216, 1174, 1495, 2424
Bse3DI GCAATG 1 cut(s) 1700
Bse8I GATNNNNATC 1 cut(s) 1333
BseBI CCWGG 1 cut(s) 2090
BseCI ATCGAT 1 cut(s) 2189
BseDI CCNNGG 6 cut(s) 72, 843, 1008, 1794, 1892, 2307
BseGI GGATG 5 cut(s) 277, 518, 1382, 1734, 2436
BseJI GATNNNNATC 1 cut(s) 1333
BseLI CCNNNNNNNGG 5 cut(s) 2148, 2176, 2271, 2313, 2430
BseMI GCAATG 1 cut(s) 1700
BseMII CTCAG 2 cut(s) 204, 395
BseNI ACTGG 4 cut(s) 216, 1174, 1495, 2424
BseXI GCAGC 8 cut(s) 158, 265, 268, 287, 979, 1504, 1667, 2235
Bsh1236I CGCG 1 cut(s) 1884
BshVI ATCGAT 1 cut(s) 2189
BsiHKCI CYCGRG 2 cut(s) 690, 729
BsiSI CCGG 2 cut(s) 1350, 2032
BslFI GGGAC 3 cut(s) 263, 593, 1600
BslI CCNNNNNNNGG 5 cut(s) 2148, 2176, 2271, 2313, 2430
BsmAI GTCTC 1 cut(s) 1114
BsmFI GGGAC 3 cut(s) 263, 593, 1600
BsmI GAATGC 1 cut(s) 1211
Bso31I GGTCTC 1 cut(s) 1114
BsoBI CYCGRG 2 cut(s) 690, 729
Bsp119I TTCGAA 1 cut(s) 1215
Bsp19I CCATGG 2 cut(s) 843, 2307
BspACI CCGC 3 cut(s) 1884, 2244, 2247
BspCNI CTCAG 2 cut(s) 203, 394
BspDI ATCGAT 1 cut(s) 2189
BspFNI CGCG 1 cut(s) 1884
BspHI TCATGA 2 cut(s) 786, 834
BspLI GGNNCC 1 cut(s) 387
BspMAI CTGCAG 1 cut(s) 286
BspMI ACCTGC 1 cut(s) 275
BspOI GCTAGC 1 cut(s) 1599
BspPI GGATC 5 cut(s) 791, 1342, 1378, 1457, 2129
BspT104I TTCGAA 1 cut(s) 1215
BspTNI GGTCTC 1 cut(s) 1114
BsrDI GCAATG 1 cut(s) 1700
BsrI ACTGG 4 cut(s) 216, 1174, 1495, 2424
BssECI CCNNGG 6 cut(s) 72, 843, 1008, 1794, 1892, 2307
BssNI GRCGYC 1 cut(s) 1897
BssSI CACGAG 2 cut(s) 603, 747
BssT1I CCWWGG 5 cut(s) 72, 843, 1794, 1892, 2307
Bst2BI CACGAG 2 cut(s) 603, 747
Bst2UI CCWGG 1 cut(s) 2090
Bst4CI ACNGT 2 cut(s) 1816, 2020
Bst6I CTCTTC 1 cut(s) 53
BstACI GRCGYC 1 cut(s) 1897
BstAPI GCANNNNNTGC 1 cut(s) 281
BstBAI YACGTR 1 cut(s) 1148
BstBI TTCGAA 1 cut(s) 1215
BstC8I GCNNGC 4 cut(s) 318, 348, 1577, 1597
BstDEI CTNAG 3 cut(s) 190, 381, 422
BstDSI CCRYGG 3 cut(s) 843, 1008, 2307
BstENI CCTNNNNNAGG 1 cut(s) 2269
BstF5I GGATG 5 cut(s) 277, 518, 1382, 1734, 2436
BstFNI CGCG 1 cut(s) 1884
BstMAI GTCTC 1 cut(s) 1114
BstMWI GCNNNNNNNGC 6 cut(s) 177, 281, 874, 989, 998, 1652
BstNI CCWGG 1 cut(s) 2090
BstNSI RCATGY 1 cut(s) 712
BstSCI CCNGG 2 cut(s) 1348, 2088
BstSFI CTRYAG 2 cut(s) 282, 1647
BstUI CGCG 1 cut(s) 1884
BstV1I GCAGC 8 cut(s) 158, 265, 268, 287, 979, 1504, 1667, 2235
BstV2I GAAGAC 3 cut(s) 14, 688, 1881
BstX2I RGATCY 2 cut(s) 1334, 1383
BstYI RGATCY 2 cut(s) 1334, 1383
Bsu15I ATCGAT 1 cut(s) 2189
BsuTUI ATCGAT 1 cut(s) 2189
BtgI CCRYGG 3 cut(s) 843, 1008, 2307
BtsCI GGATG 5 cut(s) 277, 518, 1382, 1734, 2436
BtsIMutI CAGTG 3 cut(s) 639, 1710, 2431
BveI ACCTGC 1 cut(s) 275
Cac8I GCNNGC 4 cut(s) 318, 348, 1577, 1597
CaiI CAGNNNCTG 1 cut(s) 281
CciI TCATGA 2 cut(s) 786, 834
Cfr13I GGNCC 7 cut(s) 184, 329, 1347, 1798, 2151, 2315, 2421
ClaI ATCGAT 1 cut(s) 2189
CseI GACGC 2 cut(s) 1652, 1886
Csp6I GTAC 5 cut(s) 102, 816, 908, 1149, 1457
CspCI CAANNNNNGTGG 6 cut(s) 997, 1032, 1305, 1340, 1965, 2000
CviAII CATG 9 cut(s) 181, 709, 787, 835, 844, 1072, 1770, 2143, 2308
CviQI GTAC 5 cut(s) 102, 816, 908, 1149, 1457
DdeI CTNAG 3 cut(s) 190, 381, 422
DraI TTTAAA 2 cut(s) 1159, 2326
DraIII CACNNNGTG 1 cut(s) 1277
EaeI YGGCCR 4 cut(s) 75, 1120, 1791, 2033
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
EciI GGCGGA 1 cut(s) 2233
Eco130I CCWWGG 5 cut(s) 72, 843, 1794, 1892, 2307
Eco147I AGGCCT 1 cut(s) 868
Eco31I GGTCTC 1 cut(s) 1114
Eco32I GATATC 1 cut(s) 496
Eco47I GGWCC 2 cut(s) 329, 1798
Eco57I CTGAAG 1 cut(s) 1191
Eco88I CYCGRG 2 cut(s) 690, 729
EcoNI CCTNNNNNAGG 1 cut(s) 2269
EcoO109I RGGNCCY 1 cut(s) 1798
EcoRI GAATTC 1 cut(s) 838
EcoRII CCWGG 1 cut(s) 2088
EcoRV GATATC 1 cut(s) 496
EcoT14I CCWWGG 5 cut(s) 72, 843, 1794, 1892, 2307
EcoT22I ATGCAT 2 cut(s) 1003, 1771
ErhI CCWWGG 5 cut(s) 72, 843, 1794, 1892, 2307
FaeI CATG 9 cut(s) 184, 712, 790, 838, 847, 1075, 1773, 2146, 2311
FalI AAGNNNNNCTT 2 cut(s) 1614, 1646
FaqI GGGAC 3 cut(s) 263, 593, 1600
FatI CATG 9 cut(s) 180, 708, 786, 834, 843, 1071, 1769, 2142, 2307
FauNDI CATATG 1 cut(s) 1537
FbaI TGATCA 1 cut(s) 1074
FblI GTMKAC 3 cut(s) 224, 540, 1989
Fnu4HI GCNGC 9 cut(s) 172, 276, 279, 282, 993, 1518, 1656, 2224, 2247
FokI GGATG 5 cut(s) 284, 525, 1389, 1741, 2423
Fsp4HI GCNGC 9 cut(s) 172, 276, 279, 282, 993, 1518, 1656, 2224, 2247
FspBI CTAG 5 cut(s) 255, 755, 1152, 1596, 1998
GluI GCNGC 9 cut(s) 172, 276, 279, 282, 993, 1518, 1656, 2224, 2247
GsuI CTGGAG 1 cut(s) 1191
HapII CCGG 2 cut(s) 1350, 2032
HgaI GACGC 2 cut(s) 1652, 1886
Hin1I GRCGYC 1 cut(s) 1897
Hin1II CATG 9 cut(s) 184, 712, 790, 838, 847, 1075, 1773, 2146, 2311
HincII GTYRAC 1 cut(s) 225
HindII GTYRAC 1 cut(s) 225
HindIII AAGCTT 1 cut(s) 1912
HinfI GANTC 9 cut(s) 143, 212, 251, 467, 693, 827, 1355, 1588, 1715
HpaII CCGG 2 cut(s) 1350, 2032
HphI GGTGA 1 cut(s) 1247
Hpy166II GTNNAC 8 cut(s) 225, 541, 639, 706, 1280, 1693, 1990, 2475
Hpy188I TCNGA 3 cut(s) 193, 1371, 1752
Hpy8I GTNNAC 8 cut(s) 225, 541, 639, 706, 1280, 1693, 1990, 2475
Hpy99I CGWCG 3 cut(s) 229, 1646, 1663
HpyAV CCTTC 8 cut(s) 426, 764, 842, 912, 1366, 2148, 2275, 2353
HpyCH4III ACNGT 2 cut(s) 1816, 2020
HpyCH4IV ACGT 2 cut(s) 1147, 2006
HpyF10VI GCNNNNNNNGC 6 cut(s) 177, 281, 874, 989, 998, 1652
HpyF3I CTNAG 3 cut(s) 190, 381, 422
HpySE526I ACGT 2 cut(s) 1147, 2006
Hsp92I GRCGYC 1 cut(s) 1897
Hsp92II CATG 9 cut(s) 184, 712, 790, 838, 847, 1075, 1773, 2146, 2311
Ksp22I TGATCA 1 cut(s) 1074
LmnI GCTCC 1 cut(s) 1241
Lsp1109I GCAGC 8 cut(s) 158, 265, 268, 287, 979, 1504, 1667, 2235
LweI GCATC 4 cut(s) 183, 262, 571, 979
MaeI CTAG 5 cut(s) 255, 755, 1152, 1596, 1998
MaeII ACGT 2 cut(s) 1147, 2006
MaeIII GTNAC 4 cut(s) 1143, 1197, 1543, 2007
MboII GAAGA 8 cut(s) 16, 19, 40, 688, 1197, 1768, 1822, 1886
MfeI CAATTG 2 cut(s) 1014, 1086
MflI RGATCY 2 cut(s) 1334, 1383
MlsI TGGCCA 3 cut(s) 77, 1122, 1793
MluNI TGGCCA 3 cut(s) 77, 1122, 1793
MlyI GAGTC 3 cut(s) 245, 702, 1582
MmeI TCCRAC 2 cut(s) 952, 2047
Mox20I TGGCCA 3 cut(s) 77, 1122, 1793
Mph1103I ATGCAT 2 cut(s) 1003, 1771
MroXI GAANNNNTTC 1 cut(s) 1878
MscI TGGCCA 3 cut(s) 77, 1122, 1793
MslI CAYNNNNRTG 1 cut(s) 179
Msp20I TGGCCA 3 cut(s) 77, 1122, 1793
MspA1I CMGCKG 1 cut(s) 278
MspI CCGG 2 cut(s) 1350, 2032
MspR9I CCNGG 2 cut(s) 1350, 2090
MunI CAATTG 2 cut(s) 1014, 1086
Mva1269I GAATGC 1 cut(s) 1211
MvaI CCWGG 1 cut(s) 2090
MvnI CGCG 1 cut(s) 1884
MwoI GCNNNNNNNGC 6 cut(s) 177, 281, 874, 989, 998, 1652
NciI CCSGG 1 cut(s) 1350
NcoI CCATGG 2 cut(s) 843, 2307
NdeI CATATG 1 cut(s) 1537
NheI GCTAGC 1 cut(s) 1595
NlaIII CATG 9 cut(s) 184, 712, 790, 838, 847, 1075, 1773, 2146, 2311
NlaIV GGNNCC 1 cut(s) 387
NmuCI GTSAC 2 cut(s) 1143, 2007
NsiI ATGCAT 2 cut(s) 1003, 1771
NspI RCATGY 1 cut(s) 712
NspV TTCGAA 1 cut(s) 1215
PaeR7I CTCGAG 2 cut(s) 690, 729
PagI TCATGA 2 cut(s) 786, 834
PceI AGGCCT 1 cut(s) 868
PciI ACATGT 1 cut(s) 708
PctI GAATGC 1 cut(s) 1211
PdmI GAANNNNTTC 1 cut(s) 1878
PfeI GAWTC 6 cut(s) 143, 212, 467, 827, 1355, 1715
PkrI GCNGC 9 cut(s) 173, 277, 280, 283, 994, 1519, 1657, 2225, 2248
PleI GAGTC 3 cut(s) 245, 701, 1582
PpsI GAGTC 3 cut(s) 245, 701, 1582
Ppu21I YACGTR 1 cut(s) 1148
PpuMI RGGWCCY 1 cut(s) 1798
PscI ACATGT 1 cut(s) 708
PshBI ATTAAT 1 cut(s) 1869
PsiI TTATAA 2 cut(s) 2063, 2184
Psp5II RGGWCCY 1 cut(s) 1798
Psp6I CCWGG 1 cut(s) 2088
PspGI CCWGG 1 cut(s) 2088
PspN4I GGNNCC 1 cut(s) 387
PspPI GGNCC 7 cut(s) 184, 329, 1347, 1798, 2151, 2315, 2421
PspPPI RGGWCCY 1 cut(s) 1798
PspXI VCTCGAGB 1 cut(s) 690
PstI CTGCAG 1 cut(s) 286
PstNI CAGNNNCTG 1 cut(s) 281
PsuI RGATCY 2 cut(s) 1334, 1383
PvuII CAGCTG 1 cut(s) 278
RsaI GTAC 5 cut(s) 103, 817, 909, 1150, 1458
RsaNI GTAC 5 cut(s) 102, 816, 908, 1149, 1457
RseI CAYNNNNRTG 1 cut(s) 179
SalI GTCGAC 1 cut(s) 223
SatI GCNGC 9 cut(s) 172, 276, 279, 282, 993, 1518, 1656, 2224, 2247
Sau96I GGNCC 7 cut(s) 184, 329, 1347, 1798, 2151, 2315, 2421
ScaI AGTACT 1 cut(s) 103
SchI GAGTC 3 cut(s) 245, 702, 1582
ScrFI CCNGG 2 cut(s) 1350, 2090
SfaNI GCATC 4 cut(s) 183, 262, 571, 979
SfcI CTRYAG 2 cut(s) 282, 1647
Sfr274I CTCGAG 2 cut(s) 690, 729
SfuI TTCGAA 1 cut(s) 1215
SinI GGWCC 2 cut(s) 329, 1798
SlaI CTCGAG 2 cut(s) 690, 729
SmiMI CAYNNNNRTG 1 cut(s) 179
SmlI CTYRAG 3 cut(s) 474, 690, 729
SmoI CTYRAG 3 cut(s) 474, 690, 729
SseBI AGGCCT 1 cut(s) 868
SsiI CCGC 3 cut(s) 1884, 2244, 2247
SspI AATATT 3 cut(s) 1038, 2322, 2386
SspMI CTAG 5 cut(s) 255, 755, 1152, 1596, 1998
StuI AGGCCT 1 cut(s) 868
StyD4I CCNGG 2 cut(s) 1348, 2088
StyI CCWWGG 5 cut(s) 72, 843, 1794, 1892, 2307
TaaI ACNGT 2 cut(s) 1816, 2020
TaiI ACGT 2 cut(s) 1150, 2009
TatI WGTACW 2 cut(s) 101, 815
TauI GCSGC 1 cut(s) 2249
TfiI GAWTC 6 cut(s) 143, 212, 467, 827, 1355, 1715
TscAI CASTG 3 cut(s) 646, 1717, 2431
TseFI GTSAC 2 cut(s) 1143, 2007
TseI GCWGC 8 cut(s) 171, 275, 278, 281, 992, 1517, 1655, 2223
Tsp45I GTSAC 2 cut(s) 1143, 2007
TspRI CASTG 3 cut(s) 646, 1717, 2431
VpaK11BI GGWCC 2 cut(s) 329, 1798
VspI ATTAAT 1 cut(s) 1869
XagI CCTNNNNNAGG 1 cut(s) 2269
XapI RAATTY 4 cut(s) 838, 923, 1442, 2288
XbaI TCTAGA 1 cut(s) 254
XceI RCATGY 1 cut(s) 712
XhoI CTCGAG 2 cut(s) 690, 729
XmiI GTMKAC 3 cut(s) 224, 540, 1989
XmnI GAANNNNTTC 1 cut(s) 1878
XspI CTAG 5 cut(s) 255, 755, 1152, 1596, 1998
ZrmI AGTACT 1 cut(s) 103
Zsp2I ATGCAT 2 cut(s) 1003, 1771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.