Rroxscaffold_7G00198280

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
43487445 .. 43489761
2317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198280.1

Sequence Viewer

Length: 1692 bp
ATGATCAGAAAAAACTCCACCAACCTTGTTCTTTCTGTCATTTTCTTGTTCCTTTCTTCATGGATTTGCTTGGCCATGGCACAAAACAAGGCCAGCATCCCAGTTAATGTGGGTGTTGTTCTTAACCTTAATAGACTATATGGAAAGATTTGGTTGAGCTGCATCAAAATTGCCCTCTCAGATTTCTATGCTTCTCATGCTCACTACAAGACTAGGCTGGTCTTGAACATTCGGAACTCCAAGGAAAATGTTGTTGGCGCAGCTGCTGCAGCTTTAGATCTGATAAAGTATGCACAAGTGCAAGCAATCCTAGGGCCAGTAACATCAATGCAGGCAAGCTTTGTTATCAACCTCGGTAACCAAGCTCAAGTGCCAATTATATCATTTTCTGCGACAAGCCCCTCTCTTACATCGTTGCGAAGCTCCTACTTTTTCCGATTTACTCAAAATGACTCAACTCAAGTTAAAGCCATTAGTGCAATAGTGAAAGCTTTTGGATGGAGACAAGTTGTGCCCATCTACATAGATACTGAGTTTGGTGAAGGAATCATACCATATTTAACTGATGCCTTATACGAGGTTGATGTCCGTGTCCCCTATCGGAGTGTCATTTCCTCAATAGCCACAGATGATGAAATTATGGAAGAGCTTTACAAGTTACAAACAATGCAAACCAGAGTCTTCATTGTCCACATGACAGCCGATCTATGCTCCAGGCTATTTGCAAAGGCAAAAGAACTTGGAATGATGAGTGAAGGCTATGTTTGGTTAGCAACTACTGCGATAGCGGATGTTTTACAGCGAACAAAATCATCAGTTATCAAGTCCATGGAAGGTGTATTGGGTATACAAACTTATGTTCCAGAAACCATGGAGCTTGAAGAATTCAAGCTTCGGTGGAAACAGCAATTCCAACAAGACAATCCAACCATCATTAATGCTGAACTGGATGTTTTTGGACTTCGGGCTTATGATGCTGCTTTTGCACTAGCCATGGCCATTGAACAAGTGCGGACTACCAGATTATTTGGCTTCCAAAAGACAAATGCTTCGTCGATCAGGTCGACAGATCTTGATAGTTTTGAGGTTTCTGAAAATGGTCCAGAACTTTGCAAAGACTTGTCAATCACAAGATTTCAAGGCATTGCTGGAGATGTCAGTCTTGTTGATGGACAATTTCAATCATCAACTTTTAAGATAGTTAATTTAAATGGTGGTGGAGAAAGAGCAATTGGATTTTGGACACCGAAAAATGGACTAATGAGAAAATTGGGATCATCAGCAAACTCGCGAGTATTTTCAACGTCTAAGTGCGATCTTGGACCAATAATATGGCCCGGAGACTCAATCTCTGTCCCAAAGGGATGGGAGATCCCTACAAGTGGCAAGAAGTTGAGAATAGGAGTTCCTATGAAGGATGGTTTTACTGAATTTGTTACTGTCAAAAAAGATCTGAGCAGTAATAGAACAGATGTTTCTGGGTTTAGTATTGATGTCTTCAAGGCTGCTGTCGAAATGTTACCATATGCTCTTCCTTATGAACTCATTCCTTTTGCAAAGTCTGATGGATCCAGTGCCGGCACTTACAACGATTTGGTGTATCAAGTCTATCTAGGGGTAAAATCTCATCTCTTTCAAATGAAATTCAATTCTATTTTGGTTAGGATTAATTACAAAATATCCGAATTATGA

Protein Analysis

563

Amino Acids

62.5

Weight (kDa)

8.8

Isoelectric Point (pI)

30.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 47 - 339 1.2e-19 Periplasmic binding protein
ANF_receptor PF01094 52 - 405 1.4e-84 Receptor family ligand binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 847, 1064
AccII CGCG 1 cut(s) 1291
AciI CCGC 2 cut(s) 788, 1012
AclWI GGATC 4 cut(s) 1282, 1366, 1563, 1576
AcoI YGGCCR 2 cut(s) 72, 996
AcsI RAATTY 3 cut(s) 884, 1430, 1643
AfiI CCNNNNNNNGG 2 cut(s) 1253, 1382
AjnI CCWGG 1 cut(s) 713
AjuI GAANNNNNNNTTGG 4 cut(s) 237, 269, 1215, 1247
Alw26I GTCTC 2 cut(s) 496, 1335
AlwI GGATC 4 cut(s) 1282, 1366, 1563, 1576
AlwNI CAGNNNCTG 1 cut(s) 266
AoxI GGCC 5 cut(s) 72, 90, 314, 996, 1334
ApeKI GCWGC 7 cut(s) 159, 260, 263, 266, 269, 977, 1505
ApoI RAATTY 3 cut(s) 884, 1430, 1643
ArsI GACNNNNNNTTYG 4 cut(s) 1033, 1037, 1065, 1069
AseI ATTAAT 2 cut(s) 936, 1668
Asp700I GAANNNNTTC 1 cut(s) 1545
AspA2I CCTAGG 1 cut(s) 310
AspLEI GCGC 1 cut(s) 260
AspS9I GGNCC 4 cut(s) 314, 1100, 1322, 1335
AsuC2I CCSGG 1 cut(s) 1338
AsuHPI GGTGA 1 cut(s) 551
AvaII GGWCC 2 cut(s) 1100, 1322
AvrII CCTAGG 1 cut(s) 310
BaeGI GKGCMC 1 cut(s) 516
BalI TGGCCA 2 cut(s) 74, 998
BamHI GGATCC 1 cut(s) 1568
BarI GAAGNNNNNNTAC 2 cut(s) 534, 566
BbsI GAAGAC 2 cut(s) 673, 1489
BbvI GCAGC 7 cut(s) 146, 250, 253, 272, 281, 964, 1492
BccI CCATC 7 cut(s) 492, 524, 938, 1163, 1359, 1412, 1559
BciT130I CCWGG 1 cut(s) 715
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1338
BcoDI GTCTC 2 cut(s) 496, 1335
BfaI CTAG 4 cut(s) 213, 311, 989, 1613
BfmI CTRYAG 1 cut(s) 267
BglII AGATCT 3 cut(s) 277, 1069, 1450
BisI GCNGC 7 cut(s) 160, 261, 264, 267, 270, 978, 1506
BlnI CCTAGG 1 cut(s) 310
BlsI GCNGC 7 cut(s) 161, 262, 265, 268, 271, 979, 1507
Bme1390I CCNGG 2 cut(s) 715, 1338
Bme18I GGWCC 2 cut(s) 1100, 1322
BmgT120I GGNCC 4 cut(s) 314, 1100, 1322, 1335
BmiI GGNNCC 1 cut(s) 1570
BmrFI CCNGG 2 cut(s) 715, 1338
BmrI ACTGGG 1 cut(s) 95
BmsI GCATC 4 cut(s) 105, 171, 556, 964
BmuI ACTGGG 1 cut(s) 95
BpiI GAAGAC 2 cut(s) 673, 1489
BpmI CTGGAG 2 cut(s) 697, 1170
BpuEI CTTGAG 2 cut(s) 351, 444
BpuMI CCSGG 1 cut(s) 1338
BsaJI CCNNGG 7 cut(s) 75, 240, 310, 352, 828, 870, 993
Bsc4I CCNNNNNNNGG 2 cut(s) 1253, 1382
Bse118I RCCGGY 1 cut(s) 1577
Bse1I ACTGG 4 cut(s) 101, 317, 951, 1572
Bse3DI GCAATG 1 cut(s) 1143
BseBI CCWGG 1 cut(s) 715
BseDI CCNNGG 7 cut(s) 75, 240, 310, 352, 828, 870, 993
BseGI GGATG 6 cut(s) 96, 503, 796, 955, 1370, 1423
BseLI CCNNNNNNNGG 2 cut(s) 1253, 1382
BseMI GCAATG 1 cut(s) 1143
BseMII CTCAG 3 cut(s) 192, 522, 1445
BseNI ACTGG 4 cut(s) 101, 317, 951, 1572
BseSI GKGCMC 1 cut(s) 516
BseXI GCAGC 7 cut(s) 146, 250, 253, 272, 281, 964, 1492
Bsh1236I CGCG 1 cut(s) 1291
BshFI GGCC 5 cut(s) 74, 92, 316, 998, 1336
BsiSI CCGG 2 cut(s) 1338, 1578
BslFI GGGAC 2 cut(s) 578, 1340
BslI CCNNNNNNNGG 2 cut(s) 1253, 1382
BsmAI GTCTC 2 cut(s) 496, 1335
BsmFI GGGAC 2 cut(s) 578, 1340
BsnI GGCC 5 cut(s) 74, 92, 316, 998, 1336
Bsp1286I GDGCHC 1 cut(s) 516
Bsp19I CCATGG 4 cut(s) 75, 828, 870, 993
Bsp68I TCGCGA 1 cut(s) 1291
BspACI CCGC 2 cut(s) 788, 1012
BspANI GGCC 5 cut(s) 74, 92, 316, 998, 1336
BspCNI CTCAG 3 cut(s) 191, 523, 1446
BspFNI CGCG 1 cut(s) 1291
BspLI GGNNCC 1 cut(s) 1570
BspMAI CTGCAG 1 cut(s) 271
BspPI GGATC 4 cut(s) 1282, 1366, 1563, 1576
BspQI GCTCTTC 2 cut(s) 639, 1536
BsrDI GCAATG 1 cut(s) 1143
BsrFI RCCGGY 1 cut(s) 1577
BsrI ACTGG 4 cut(s) 101, 317, 951, 1572
BssAI RCCGGY 1 cut(s) 1577
BssECI CCNNGG 7 cut(s) 75, 240, 310, 352, 828, 870, 993
BssNAI GTATAC 1 cut(s) 848
BssT1I CCWWGG 6 cut(s) 75, 240, 310, 828, 870, 993
Bst1107I GTATAC 1 cut(s) 848
Bst2UI CCWGG 1 cut(s) 715
Bst4CI ACNGT 1 cut(s) 1441
Bst6I CTCTTC 2 cut(s) 639, 1536
BstAPI GCANNNNNTGC 2 cut(s) 266, 779
BstC8I GCNNGC 5 cut(s) 94, 303, 333, 337, 1579
BstDEI CTNAG 4 cut(s) 178, 531, 1308, 1454
BstDSI CCRYGG 4 cut(s) 75, 828, 870, 993
BstEII GGTNACC 1 cut(s) 356
BstF5I GGATG 6 cut(s) 96, 503, 796, 955, 1370, 1423
BstFNI CGCG 1 cut(s) 1291
BstHHI GCGC 1 cut(s) 260
BstMAI GTCTC 2 cut(s) 496, 1335
BstMWI GCNNNNNNNGC 7 cut(s) 197, 266, 269, 476, 779, 974, 983
BstNI CCWGG 1 cut(s) 715
BstPI GGTNACC 1 cut(s) 356
BstSCI CCNGG 2 cut(s) 713, 1336
BstSFI CTRYAG 1 cut(s) 267
BstSLI GKGCMC 1 cut(s) 516
BstUI CGCG 1 cut(s) 1291
BstV1I GCAGC 7 cut(s) 146, 250, 253, 272, 281, 964, 1492
BstV2I GAAGAC 2 cut(s) 673, 1489
BstX2I RGATCY 5 cut(s) 277, 1069, 1371, 1450, 1568
BstXI CCANNNNNNTGG 2 cut(s) 1332, 1365
BstYI RGATCY 5 cut(s) 277, 1069, 1371, 1450, 1568
BstZ17I GTATAC 1 cut(s) 848
BsuRI GGCC 5 cut(s) 74, 92, 316, 998, 1336
BtgI CCRYGG 4 cut(s) 75, 828, 870, 993
BtsCI GGATG 6 cut(s) 96, 503, 796, 955, 1370, 1423
BtsIMutI CAGTG 1 cut(s) 1579
BtuMI TCGCGA 1 cut(s) 1291
Cac8I GCNNGC 5 cut(s) 94, 303, 333, 337, 1579
CaiI CAGNNNCTG 1 cut(s) 266
CfoI GCGC 1 cut(s) 260
Cfr10I RCCGGY 1 cut(s) 1577
Cfr13I GGNCC 4 cut(s) 314, 1100, 1322, 1335
CspCI CAANNNNNGTGG 2 cut(s) 7, 42
CviAII CATG 7 cut(s) 60, 76, 197, 694, 829, 871, 994
DdeI CTNAG 4 cut(s) 178, 531, 1308, 1454
DraI TTTAAA 1 cut(s) 1209
EaeI YGGCCR 2 cut(s) 72, 996
Eam1104I CTCTTC 2 cut(s) 639, 1536
EarI CTCTTC 2 cut(s) 639, 1536
Eco130I CCWWGG 6 cut(s) 75, 240, 310, 828, 870, 993
Eco47I GGWCC 2 cut(s) 1100, 1322
Eco91I GGTNACC 1 cut(s) 356
EcoO65I GGTNACC 1 cut(s) 356
EcoRI GAATTC 1 cut(s) 884
EcoRII CCWGG 1 cut(s) 713
EcoT14I CCWWGG 6 cut(s) 75, 240, 310, 828, 870, 993
ErhI CCWWGG 6 cut(s) 75, 240, 310, 828, 870, 993
FaeI CATG 7 cut(s) 63, 79, 200, 697, 832, 874, 997
FaqI GGGAC 2 cut(s) 578, 1340
FatI CATG 7 cut(s) 59, 75, 196, 693, 828, 870, 993
FauNDI CATATG 1 cut(s) 1525
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 2 cut(s) 847, 1064
Fnu4HI GCNGC 7 cut(s) 160, 261, 264, 267, 270, 978, 1506
FokI GGATG 6 cut(s) 83, 510, 803, 962, 1377, 1430
Fsp4HI GCNGC 7 cut(s) 160, 261, 264, 267, 270, 978, 1506
FspBI CTAG 4 cut(s) 213, 311, 989, 1613
GlaI GCGC 1 cut(s) 259
GluI GCNGC 7 cut(s) 160, 261, 264, 267, 270, 978, 1506
GsuI CTGGAG 2 cut(s) 697, 1170
HaeIII GGCC 5 cut(s) 74, 92, 316, 998, 1336
HapII CCGG 2 cut(s) 1338, 1578
HhaI GCGC 1 cut(s) 260
Hin1II CATG 7 cut(s) 63, 79, 200, 697, 832, 874, 997
Hin6I GCGC 1 cut(s) 258
HinP1I GCGC 1 cut(s) 258
HincII GTYRAC 1 cut(s) 1065
HindII GTYRAC 1 cut(s) 1065
HindIII AAGCTT 3 cut(s) 337, 489, 890
HinfI GANTC 4 cut(s) 452, 546, 678, 1343
HpaII CCGG 2 cut(s) 1338, 1578
HphI GGTGA 1 cut(s) 551
Hpy166II GTNNAC 3 cut(s) 691, 848, 1065
Hpy188III TCNNGA 5 cut(s) 223, 863, 1073, 1103, 1290
Hpy8I GTNNAC 3 cut(s) 691, 848, 1065
Hpy99I CGWCG 1 cut(s) 1057
HpyAV CCTTC 4 cut(s) 536, 749, 827, 1408
HpyCH4III ACNGT 1 cut(s) 1441
HpyCH4IV ACGT 1 cut(s) 1304
HpyF10VI GCNNNNNNNGC 7 cut(s) 197, 266, 269, 476, 779, 974, 983
HpyF3I CTNAG 4 cut(s) 178, 531, 1308, 1454
HpySE526I ACGT 1 cut(s) 1304
Hsp92II CATG 7 cut(s) 63, 79, 200, 697, 832, 874, 997
HspAI GCGC 1 cut(s) 258
KroI GCCGGC 1 cut(s) 1577
KroNI GCCGGC 1 cut(s) 1579
Ksp22I TGATCA 1 cut(s) 3
LguI GCTCTTC 2 cut(s) 639, 1536
LmnI GCTCC 3 cut(s) 428, 716, 874
Lsp1109I GCAGC 7 cut(s) 146, 250, 253, 272, 281, 964, 1492
LweI GCATC 4 cut(s) 105, 171, 556, 964
MaeI CTAG 4 cut(s) 213, 311, 989, 1613
MaeII ACGT 1 cut(s) 1304
MaeIII GTNAC 5 cut(s) 319, 356, 657, 1435, 1518
MboII GAAGA 6 cut(s) 48, 656, 673, 893, 1489, 1523
MfeI CAATTG 1 cut(s) 1230
MflI RGATCY 5 cut(s) 277, 1069, 1371, 1450, 1568
MhlI GDGCHC 1 cut(s) 516
MlsI TGGCCA 2 cut(s) 74, 998
MluNI TGGCCA 2 cut(s) 74, 998
MlyI GAGTC 3 cut(s) 446, 687, 1337
MmeI TCCRAC 2 cut(s) 937, 950
MnlI CCTC 6 cut(s) 185, 362, 412, 571, 625, 1078
Mox20I TGGCCA 2 cut(s) 74, 998
MroNI GCCGGC 1 cut(s) 1577
MroXI GAANNNNTTC 1 cut(s) 1545
MscI TGGCCA 2 cut(s) 74, 998
Msp20I TGGCCA 2 cut(s) 74, 998
MspA1I CMGCKG 1 cut(s) 263
MspI CCGG 2 cut(s) 1338, 1578
MspR9I CCNGG 2 cut(s) 715, 1338
MunI CAATTG 1 cut(s) 1230
MvaI CCWGG 1 cut(s) 715
MvnI CGCG 1 cut(s) 1291
MwoI GCNNNNNNNGC 7 cut(s) 197, 266, 269, 476, 779, 974, 983
NaeI GCCGGC 1 cut(s) 1579
NciI CCSGG 1 cut(s) 1338
NcoI CCATGG 4 cut(s) 75, 828, 870, 993
NdeI CATATG 1 cut(s) 1525
NgoMIV GCCGGC 1 cut(s) 1577
NlaIII CATG 7 cut(s) 63, 79, 200, 697, 832, 874, 997
NlaIV GGNNCC 1 cut(s) 1570
NruI TCGCGA 1 cut(s) 1291
PciSI GCTCTTC 2 cut(s) 639, 1536
PcsI WCGNNNNNNNCGW 1 cut(s) 1061
PdiI GCCGGC 1 cut(s) 1579
PdmI GAANNNNTTC 1 cut(s) 1545
PfeI GAWTC 1 cut(s) 546
PkrI GCNGC 7 cut(s) 161, 262, 265, 268, 271, 979, 1507
PleI GAGTC 3 cut(s) 446, 686, 1337
PpsI GAGTC 3 cut(s) 446, 686, 1337
PshBI ATTAAT 2 cut(s) 936, 1668
Psp6I CCWGG 1 cut(s) 713
PspEI GGTNACC 1 cut(s) 356
PspGI CCWGG 1 cut(s) 713
PspN4I GGNNCC 1 cut(s) 1570
PspPI GGNCC 4 cut(s) 314, 1100, 1322, 1335
PstI CTGCAG 1 cut(s) 271
PstNI CAGNNNCTG 1 cut(s) 266
PsuI RGATCY 5 cut(s) 277, 1069, 1371, 1450, 1568
PvuII CAGCTG 1 cut(s) 263
RruI TCGCGA 1 cut(s) 1291
SalI GTCGAC 1 cut(s) 1063
SapI GCTCTTC 2 cut(s) 639, 1536
SatI GCNGC 7 cut(s) 160, 261, 264, 267, 270, 978, 1506
Sau96I GGNCC 4 cut(s) 314, 1100, 1322, 1335
SchI GAGTC 3 cut(s) 446, 687, 1337
ScrFI CCNGG 2 cut(s) 715, 1338
SduI GDGCHC 1 cut(s) 516
SfaNI GCATC 4 cut(s) 105, 171, 556, 964
SfcI CTRYAG 1 cut(s) 267
SinI GGWCC 2 cut(s) 1100, 1322
SmiI ATTTAAAT 1 cut(s) 1209
SmlI CTYRAG 2 cut(s) 366, 459
SmoI CTYRAG 2 cut(s) 366, 459
SsiI CCGC 2 cut(s) 788, 1012
SspMI CTAG 4 cut(s) 213, 311, 989, 1613
StyD4I CCNGG 2 cut(s) 713, 1336
StyI CCWWGG 6 cut(s) 75, 240, 310, 828, 870, 993
SwaI ATTTAAAT 1 cut(s) 1209
TaaI ACNGT 1 cut(s) 1441
TaiI ACGT 1 cut(s) 1307
TaqI TCGA 3 cut(s) 1055, 1064, 1512
TfiI GAWTC 1 cut(s) 546
TscAI CASTG 1 cut(s) 1579
TseI GCWGC 7 cut(s) 159, 260, 263, 266, 269, 977, 1505
TspDTI ATGAA 6 cut(s) 48, 648, 673, 1427, 1554, 1655
TspGWI ACGGA 1 cut(s) 578
TspRI CASTG 1 cut(s) 1579
VpaK11BI GGWCC 2 cut(s) 1100, 1322
VspI ATTAAT 2 cut(s) 936, 1668
XapI RAATTY 3 cut(s) 884, 1430, 1643
XmaJI CCTAGG 1 cut(s) 310
XmiI GTMKAC 2 cut(s) 847, 1064
XmnI GAANNNNTTC 1 cut(s) 1545
XspI CTAG 4 cut(s) 213, 311, 989, 1613
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.