Glutamate receptor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ANF_receptor | PF01094 | 1 - 350 | 1.5e-78 | Receptor family ligand binding region |
| Peripla_BP_6 | PF13458 | 20 - 286 | 1.4e-17 | Periplasmic binding protein |
| Lig_chan-Glu_bd | PF10613 | 424 - 511 | 1.3e-06 | Ligated ion channel L-glutamate- and glycine-binding site |
| SBP_bac_3 | PF00497 | 426 - 752 | 7.7e-08 | Bacterial extracellular solute-binding proteins, family 3 |
| Lig_chan | PF00060 | 529 - 784 | 7.8e-32 | Ligand-gated ion channel |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1382 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1088, 1179 |
| AciI | CCGC | 3 cut(s) | 311, 1686, 2501 |
| AclWI | GGATC | 3 cut(s) | 1180, 1259, 1899 |
| AcoI | YGGCCR | 3 cut(s) | 1048, 1148, 2554 |
| AcsI | RAATTY | 6 cut(s) | 640, 716, 1117, 1432, 2416, 2581 |
| AcuI | CTGAAG | 3 cut(s) | 630, 2340, 2625 |
| AfaI | GTAC | 2 cut(s) | 132, 1812 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 144, 612, 1029, 1088, 1179, 2500, 2552 |
| AflIII | ACRYGT | 1 cut(s) | 1329 |
| AgeI | ACCGGT | 1 cut(s) | 1138 |
| AhlI | ACTAGT | 1 cut(s) | 337 |
| AjnI | CCWGG | 3 cut(s) | 973, 1150, 2193 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 402, 434, 828, 860 |
| Alw21I | GWGCWC | 2 cut(s) | 348, 2620 |
| Alw26I | GTCTC | 6 cut(s) | 158, 183, 328, 430, 1164, 1482 |
| AlwI | GGATC | 3 cut(s) | 1180, 1259, 1899 |
| Ama87I | CYCGRG | 1 cut(s) | 1865 |
| AoxI | GGCC | 8 cut(s) | 3, 146, 1048, 1148, 1317, 2122, 2448, 2554 |
| ApeKI | GCWGC | 7 cut(s) | 89, 92, 95, 455, 2051, 2672, 2675 |
| ApoI | RAATTY | 6 cut(s) | 640, 716, 1117, 1432, 2416, 2581 |
| AseI | ATTAAT | 3 cut(s) | 180, 1038, 1821 |
| AsiGI | ACCGGT | 1 cut(s) | 1138 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 915, 1671, 2084 |
| AspS9I | GGNCC | 8 cut(s) | 4, 146, 935, 1136, 1591, 2123, 2329, 2448 |
| AsuHPI | GGTGA | 2 cut(s) | 1870, 2203 |
| AsuII | TTCGAA | 1 cut(s) | 2024 |
| AvaI | CYCGRG | 1 cut(s) | 1865 |
| AvaII | GGWCC | 4 cut(s) | 935, 1136, 1591, 2329 |
| BaeGI | GKGCMC | 2 cut(s) | 207, 1536 |
| BalI | TGGCCA | 1 cut(s) | 1150 |
| BanI | GGYRCC | 1 cut(s) | 1382 |
| BbsI | GAAGAC | 1 cut(s) | 505 |
| Bbv12I | GWGCWC | 2 cut(s) | 348, 2620 |
| BbvCI | CCTCAGC | 1 cut(s) | 100 |
| BbvI | GCAGC | 7 cut(s) | 76, 82, 104, 467, 2038, 2659, 2662 |
| BceAI | ACGGC | 2 cut(s) | 1035, 1304 |
| BciT130I | CCWGG | 3 cut(s) | 975, 1152, 2195 |
| BciVI | GTATCC | 1 cut(s) | 1753 |
| BclI | TGATCA | 1 cut(s) | 463 |
| BcoDI | GTCTC | 6 cut(s) | 158, 183, 328, 430, 1164, 1482 |
| BcuI | ACTAGT | 1 cut(s) | 337 |
| BfaI | CTAG | 9 cut(s) | 63, 107, 338, 507, 966, 1773, 1808, 2298, 2484 |
| BfmI | CTRYAG | 4 cut(s) | 90, 453, 1443, 2676 |
| BfuI | GTATCC | 1 cut(s) | 1753 |
| BglII | AGATCT | 1 cut(s) | 109 |
| BisI | GCNGC | 7 cut(s) | 90, 93, 96, 456, 2052, 2673, 2676 |
| BlsI | GCNGC | 7 cut(s) | 91, 94, 97, 457, 2053, 2674, 2677 |
| BmcAI | AGTACT | 1 cut(s) | 1812 |
| Bme1390I | CCNGG | 3 cut(s) | 975, 1152, 2195 |
| Bme18I | GGWCC | 4 cut(s) | 935, 1136, 1591, 2329 |
| BmeT110I | CYCGRG | 1 cut(s) | 1865 |
| BmgT120I | GGNCC | 8 cut(s) | 4, 146, 935, 1136, 1591, 2123, 2329, 2448 |
| BmiI | GGNNCC | 6 cut(s) | 1384, 1592, 2125, 2330, 2449, 2567 |
| BmrFI | CCNGG | 3 cut(s) | 975, 1152, 2195 |
| BmsI | GCATC | 5 cut(s) | 388, 796, 1429, 1488, 1663 |
| BpiI | GAAGAC | 1 cut(s) | 505 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 1146, 1178, 1148, 1180, 2352, 2384 |
| BpmI | CTGGAG | 3 cut(s) | 1005, 2625, 2688 |
| Bpu10I | CCTNAGC | 1 cut(s) | 100 |
| Bpu14I | TTCGAA | 1 cut(s) | 2024 |
| BpuEI | CTTGAG | 1 cut(s) | 276 |
| Bsa29I | ATCGAT | 2 cut(s) | 158, 1305 |
| BsaI | GGTCTC | 2 cut(s) | 183, 1482 |
| BsaJI | CCNNGG | 6 cut(s) | 558, 973, 1051, 1580, 1731, 2193 |
| BsaWI | WCCGGW | 5 cut(s) | 432, 726, 1138, 1292, 2213 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1209, 1239 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 144, 612, 1029, 1088, 1179, 2500, 2552 |
| Bse118I | RCCGGY | 2 cut(s) | 1138, 1514 |
| Bse1I | ACTGG | 1 cut(s) | 149 |
| Bse3DI | GCAATG | 5 cut(s) | 831, 978, 1592, 1711, 2046 |
| BseBI | CCWGG | 3 cut(s) | 975, 1152, 2195 |
| BseCI | ATCGAT | 2 cut(s) | 158, 1305 |
| BseDI | CCNNGG | 6 cut(s) | 558, 973, 1051, 1580, 1731, 2193 |
| BseGI | GGATG | 8 cut(s) | 28, 651, 787, 1019, 1237, 1291, 2370, 2509 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 144, 612, 1029, 1088, 1179, 2500, 2552 |
| BseMI | GCAATG | 5 cut(s) | 831, 978, 1592, 1711, 2046 |
| BseMII | CTCAG | 3 cut(s) | 114, 1233, 2655 |
| BseNI | ACTGG | 1 cut(s) | 149 |
| BseRI | GAGGAG | 2 cut(s) | 2163, 2232 |
| BseSI | GKGCMC | 2 cut(s) | 207, 1536 |
| BseXI | GCAGC | 7 cut(s) | 76, 82, 104, 467, 2038, 2659, 2662 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1857 |
| BshFI | GGCC | 8 cut(s) | 5, 148, 1050, 1150, 1319, 2124, 2450, 2556 |
| BshNI | GGYRCC | 1 cut(s) | 1382 |
| BshTI | ACCGGT | 1 cut(s) | 1138 |
| BshVI | ATCGAT | 2 cut(s) | 158, 1305 |
| BsiEI | CGRYCG | 1 cut(s) | 1857 |
| BsiHKAI | GWGCWC | 2 cut(s) | 348, 2620 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1865 |
| BsiSI | CCGG | 6 cut(s) | 433, 727, 1139, 1293, 1515, 2214 |
| BslFI | GGGAC | 4 cut(s) | 80, 862, 1604, 2420 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 144, 612, 1029, 1088, 1179, 2500, 2552 |
| BsmAI | GTCTC | 6 cut(s) | 158, 183, 328, 430, 1164, 1482 |
| BsmFI | GGGAC | 4 cut(s) | 80, 862, 1604, 2420 |
| BsmI | GAATGC | 1 cut(s) | 2692 |
| BsnI | GGCC | 8 cut(s) | 5, 148, 1050, 1150, 1319, 2124, 2450, 2556 |
| Bso31I | GGTCTC | 2 cut(s) | 183, 1482 |
| BsoBI | CYCGRG | 1 cut(s) | 1865 |
| Bsp119I | TTCGAA | 1 cut(s) | 2024 |
| Bsp1286I | GDGCHC | 4 cut(s) | 207, 348, 1536, 2620 |
| Bsp143I | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| Bsp19I | CCATGG | 2 cut(s) | 1580, 1731 |
| BspACI | CCGC | 3 cut(s) | 311, 1686, 2501 |
| BspANI | GGCC | 8 cut(s) | 5, 148, 1050, 1150, 1319, 2124, 2450, 2556 |
| BspCNI | CTCAG | 3 cut(s) | 113, 1234, 2656 |
| BspDI | ATCGAT | 2 cut(s) | 158, 1305 |
| BspHI | TCATGA | 1 cut(s) | 124 |
| BspLI | GGNNCC | 6 cut(s) | 1384, 1592, 2125, 2330, 2449, 2567 |
| BspMAI | CTGCAG | 3 cut(s) | 94, 457, 2680 |
| BspPI | GGATC | 3 cut(s) | 1180, 1259, 1899 |
| BspQI | GCTCTTC | 3 cut(s) | 1350, 2090, 2601 |
| BspT104I | TTCGAA | 1 cut(s) | 2024 |
| BspT107I | GGYRCC | 1 cut(s) | 1382 |
| BspTNI | GGTCTC | 2 cut(s) | 183, 1482 |
| BsrDI | GCAATG | 5 cut(s) | 831, 978, 1592, 1711, 2046 |
| BsrFI | RCCGGY | 2 cut(s) | 1138, 1514 |
| BsrI | ACTGG | 1 cut(s) | 149 |
| BssAI | RCCGGY | 2 cut(s) | 1138, 1514 |
| BssECI | CCNNGG | 6 cut(s) | 558, 973, 1051, 1580, 1731, 2193 |
| BssMI | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| BssT1I | CCWWGG | 3 cut(s) | 558, 1580, 1731 |
| Bst2UI | CCWGG | 3 cut(s) | 975, 1152, 2195 |
| Bst4CI | ACNGT | 3 cut(s) | 1855, 1876, 2042 |
| Bst6I | CTCTTC | 5 cut(s) | 561, 1350, 2090, 2181, 2601 |
| BstBI | TTCGAA | 1 cut(s) | 2024 |
| BstC8I | GCNNGC | 1 cut(s) | 1602 |
| BstDEI | CTNAG | 5 cut(s) | 100, 546, 1242, 2435, 2664 |
| BstDSI | CCRYGG | 3 cut(s) | 1051, 1580, 1731 |
| BstF5I | GGATG | 8 cut(s) | 28, 651, 787, 1019, 1237, 1291, 2370, 2509 |
| BstKTI | GATC | 6 cut(s) | 112, 466, 1188, 1267, 1894, 2632 |
| BstMAI | GTCTC | 6 cut(s) | 158, 183, 328, 430, 1164, 1482 |
| BstMBI | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| BstMCI | CGRYCG | 1 cut(s) | 1857 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 95, 101, 308, 806, 815, 2714 |
| BstNI | CCWGG | 3 cut(s) | 975, 1152, 2195 |
| BstNSI | RCATGY | 2 cut(s) | 1128, 1333 |
| BstSCI | CCNGG | 3 cut(s) | 973, 1150, 2193 |
| BstSFI | CTRYAG | 4 cut(s) | 90, 453, 1443, 2676 |
| BstSLI | GKGCMC | 2 cut(s) | 207, 1536 |
| BstV1I | GCAGC | 7 cut(s) | 76, 82, 104, 467, 2038, 2659, 2662 |
| BstV2I | GAAGAC | 1 cut(s) | 505 |
| BstX2I | RGATCY | 4 cut(s) | 109, 1185, 1264, 1891 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 826, 1587, 1984 |
| BstYI | RGATCY | 4 cut(s) | 109, 1185, 1264, 1891 |
| Bsu15I | ATCGAT | 2 cut(s) | 158, 1305 |
| BsuI | GTATCC | 1 cut(s) | 1753 |
| BsuRI | GGCC | 8 cut(s) | 5, 148, 1050, 1150, 1319, 2124, 2450, 2556 |
| BsuTUI | ATCGAT | 2 cut(s) | 158, 1305 |
| BtgI | CCRYGG | 3 cut(s) | 1051, 1580, 1731 |
| BtsCI | GGATG | 8 cut(s) | 28, 651, 787, 1019, 1237, 1291, 2370, 2509 |
| BtsIMutI | CAGTG | 2 cut(s) | 156, 2047 |
| Cac8I | GCNNGC | 1 cut(s) | 1602 |
| CciI | TCATGA | 1 cut(s) | 124 |
| Cfr10I | RCCGGY | 2 cut(s) | 1138, 1514 |
| Cfr13I | GGNCC | 8 cut(s) | 4, 146, 935, 1136, 1591, 2123, 2329, 2448 |
| ClaI | ATCGAT | 2 cut(s) | 158, 1305 |
| Csp6I | GTAC | 2 cut(s) | 131, 1811 |
| CspAI | ACCGGT | 1 cut(s) | 1138 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1033, 1068 |
| CviQI | GTAC | 2 cut(s) | 131, 1811 |
| DdeI | CTNAG | 5 cut(s) | 100, 546, 1242, 2435, 2664 |
| DpnI | GATC | 6 cut(s) | 111, 465, 1187, 1266, 1893, 2631 |
| DpnII | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| DraI | TTTAAA | 2 cut(s) | 2134, 2317 |
| EaeI | YGGCCR | 3 cut(s) | 1048, 1148, 2554 |
| Eam1104I | CTCTTC | 5 cut(s) | 561, 1350, 2090, 2181, 2601 |
| EarI | CTCTTC | 5 cut(s) | 561, 1350, 2090, 2181, 2601 |
| Eco130I | CCWWGG | 3 cut(s) | 558, 1580, 1731 |
| Eco31I | GGTCTC | 2 cut(s) | 183, 1482 |
| Eco47I | GGWCC | 4 cut(s) | 935, 1136, 1591, 2329 |
| Eco57I | CTGAAG | 3 cut(s) | 630, 2340, 2625 |
| Eco88I | CYCGRG | 1 cut(s) | 1865 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1591, 2329 |
| EcoRI | GAATTC | 4 cut(s) | 640, 716, 2416, 2581 |
| EcoRII | CCWGG | 3 cut(s) | 973, 1150, 2193 |
| EcoT14I | CCWWGG | 3 cut(s) | 558, 1580, 1731 |
| EcoT22I | ATGCAT | 1 cut(s) | 2694 |
| ErhI | CCWWGG | 3 cut(s) | 558, 1580, 1731 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1410, 1442 |
| FaqI | GGGAC | 4 cut(s) | 80, 862, 1604, 2420 |
| FauNDI | CATATG | 5 cut(s) | 367, 525, 931, 1339, 1504 |
| FbaI | TGATCA | 1 cut(s) | 463 |
| Fnu4HI | GCNGC | 7 cut(s) | 90, 93, 96, 456, 2052, 2673, 2676 |
| FokI | GGATG | 8 cut(s) | 15, 638, 794, 1006, 1244, 1298, 2357, 2516 |
| Fsp4HI | GCNGC | 7 cut(s) | 90, 93, 96, 456, 2052, 2673, 2676 |
| FspBI | CTAG | 9 cut(s) | 63, 107, 338, 507, 966, 1773, 1808, 2298, 2484 |
| GluI | GCNGC | 7 cut(s) | 90, 93, 96, 456, 2052, 2673, 2676 |
| GsuI | CTGGAG | 3 cut(s) | 1005, 2625, 2688 |
| HaeIII | GGCC | 8 cut(s) | 5, 148, 1050, 1150, 1319, 2124, 2450, 2556 |
| HapII | CCGG | 6 cut(s) | 433, 727, 1139, 1293, 1515, 2214 |
| HincII | GTYRAC | 2 cut(s) | 603, 1327 |
| HindII | GTYRAC | 2 cut(s) | 603, 1327 |
| HindIII | AAGCTT | 2 cut(s) | 169, 1979 |
| HinfI | GANTC | 9 cut(s) | 68, 121, 510, 969, 1157, 1296, 1973, 2600, 2666 |
| HpaI | GTTAAC | 1 cut(s) | 603 |
| HpaII | CCGG | 6 cut(s) | 433, 727, 1139, 1293, 1515, 2214 |
| HphI | GGTGA | 2 cut(s) | 1870, 2203 |
| Hpy166II | GTNNAC | 5 cut(s) | 603, 897, 1239, 1327, 1489 |
| Hpy8I | GTNNAC | 5 cut(s) | 603, 897, 1239, 1327, 1489 |
| HpyAV | CCTTC | 6 cut(s) | 243, 581, 1732, 1897, 2433, 2490 |
| HpyCH4III | ACNGT | 3 cut(s) | 1855, 1876, 2042 |
| HpyCH4IV | ACGT | 1 cut(s) | 2409 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 95, 101, 308, 806, 815, 2714 |
| HpyF3I | CTNAG | 5 cut(s) | 100, 546, 1242, 2435, 2664 |
| HpySE526I | ACGT | 1 cut(s) | 2409 |
| Ksp22I | TGATCA | 1 cut(s) | 463 |
| KspAI | GTTAAC | 1 cut(s) | 603 |
| Kzo9I | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| LguI | GCTCTTC | 3 cut(s) | 1350, 2090, 2601 |
| LmnI | GCTCC | 3 cut(s) | 252, 260, 1055 |
| Lsp1109I | GCAGC | 7 cut(s) | 76, 82, 104, 467, 2038, 2659, 2662 |
| LweI | GCATC | 5 cut(s) | 388, 796, 1429, 1488, 1663 |
| MaeI | CTAG | 9 cut(s) | 63, 107, 338, 507, 966, 1773, 1808, 2298, 2484 |
| MaeII | ACGT | 1 cut(s) | 2409 |
| MaeIII | GTNAC | 9 cut(s) | 151, 1255, 1288, 1332, 1876, 2209, 2282, 2393, 2509 |
| MalI | GATC | 6 cut(s) | 111, 465, 1187, 1266, 1893, 2631 |
| MboI | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| MfeI | CAATTG | 4 cut(s) | 831, 1065, 2007, 2266 |
| MflI | RGATCY | 4 cut(s) | 109, 1185, 1264, 1891 |
| MhlI | GDGCHC | 4 cut(s) | 207, 348, 1536, 2620 |
| MlsI | TGGCCA | 1 cut(s) | 1150 |
| MluNI | TGGCCA | 1 cut(s) | 1150 |
| MlyI | GAGTC | 4 cut(s) | 62, 519, 1166, 2675 |
| MmeI | TCCRAC | 3 cut(s) | 912, 1292, 1429 |
| Mox20I | TGGCCA | 1 cut(s) | 1150 |
| Mph1103I | ATGCAT | 1 cut(s) | 2694 |
| MroXI | GAANNNNTTC | 3 cut(s) | 915, 1671, 2084 |
| MscI | TGGCCA | 1 cut(s) | 1150 |
| MslI | CAYNNNNRTG | 2 cut(s) | 824, 1585 |
| Msp20I | TGGCCA | 1 cut(s) | 1150 |
| MspA1I | CMGCKG | 2 cut(s) | 95, 2708 |
| MspI | CCGG | 6 cut(s) | 433, 727, 1139, 1293, 1515, 2214 |
| MspR9I | CCNGG | 3 cut(s) | 975, 1152, 2195 |
| MunI | CAATTG | 4 cut(s) | 831, 1065, 2007, 2266 |
| Mva1269I | GAATGC | 1 cut(s) | 2692 |
| MvaI | CCWGG | 3 cut(s) | 975, 1152, 2195 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 95, 101, 308, 806, 815, 2714 |
| NcoI | CCATGG | 2 cut(s) | 1580, 1731 |
| NdeI | CATATG | 5 cut(s) | 367, 525, 931, 1339, 1504 |
| NdeII | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| NlaIV | GGNNCC | 6 cut(s) | 1384, 1592, 2125, 2330, 2449, 2567 |
| NmuCI | GTSAC | 3 cut(s) | 151, 1876, 2209 |
| NsiI | ATGCAT | 1 cut(s) | 2694 |
| NspI | RCATGY | 2 cut(s) | 1128, 1333 |
| NspV | TTCGAA | 1 cut(s) | 2024 |
| PaeR7I | CTCGAG | 1 cut(s) | 1865 |
| PagI | TCATGA | 1 cut(s) | 124 |
| PciI | ACATGT | 1 cut(s) | 1329 |
| PciSI | GCTCTTC | 3 cut(s) | 1350, 2090, 2601 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1863 |
| PctI | GAATGC | 1 cut(s) | 2692 |
| PdmI | GAANNNNTTC | 3 cut(s) | 915, 1671, 2084 |
| PfeI | GAWTC | 5 cut(s) | 121, 969, 1296, 1973, 2600 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1088, 1179 |
| PinAI | ACCGGT | 1 cut(s) | 1138 |
| PkrI | GCNGC | 7 cut(s) | 91, 94, 97, 457, 2053, 2674, 2677 |
| PleI | GAGTC | 4 cut(s) | 62, 518, 1165, 2674 |
| PpsI | GAGTC | 4 cut(s) | 62, 518, 1165, 2674 |
| PpuMI | RGGWCCY | 2 cut(s) | 1591, 2329 |
| PscI | ACATGT | 1 cut(s) | 1329 |
| PshBI | ATTAAT | 3 cut(s) | 180, 1038, 1821 |
| Psp5II | RGGWCCY | 2 cut(s) | 1591, 2329 |
| Psp6I | CCWGG | 3 cut(s) | 973, 1150, 2193 |
| PspGI | CCWGG | 3 cut(s) | 973, 1150, 2193 |
| PspN4I | GGNNCC | 6 cut(s) | 1384, 1592, 2125, 2330, 2449, 2567 |
| PspPI | GGNCC | 8 cut(s) | 4, 146, 935, 1136, 1591, 2123, 2329, 2448 |
| PspPPI | RGGWCCY | 2 cut(s) | 1591, 2329 |
| PspXI | VCTCGAGB | 1 cut(s) | 1865 |
| PstI | CTGCAG | 3 cut(s) | 94, 457, 2680 |
| PsuI | RGATCY | 4 cut(s) | 109, 1185, 1264, 1891 |
| PvuII | CAGCTG | 2 cut(s) | 95, 2708 |
| RsaI | GTAC | 2 cut(s) | 132, 1812 |
| RsaNI | GTAC | 2 cut(s) | 131, 1811 |
| RseI | CAYNNNNRTG | 2 cut(s) | 824, 1585 |
| SapI | GCTCTTC | 3 cut(s) | 1350, 2090, 2601 |
| SatI | GCNGC | 7 cut(s) | 90, 93, 96, 456, 2052, 2673, 2676 |
| Sau3AI | GATC | 6 cut(s) | 109, 463, 1185, 1264, 1891, 2629 |
| Sau96I | GGNCC | 8 cut(s) | 4, 146, 935, 1136, 1591, 2123, 2329, 2448 |
| ScaI | AGTACT | 1 cut(s) | 1812 |
| SchI | GAGTC | 4 cut(s) | 62, 519, 1166, 2675 |
| ScrFI | CCNGG | 3 cut(s) | 975, 1152, 2195 |
| SduI | GDGCHC | 4 cut(s) | 207, 348, 1536, 2620 |
| SfaNI | GCATC | 5 cut(s) | 388, 796, 1429, 1488, 1663 |
| SfcI | CTRYAG | 4 cut(s) | 90, 453, 1443, 2676 |
| Sfr274I | CTCGAG | 1 cut(s) | 1865 |
| SfuI | TTCGAA | 1 cut(s) | 2024 |
| SinI | GGWCC | 4 cut(s) | 935, 1136, 1591, 2329 |
| SlaI | CTCGAG | 1 cut(s) | 1865 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 824, 1585 |
| SmlI | CTYRAG | 2 cut(s) | 291, 1865 |
| SmoI | CTYRAG | 2 cut(s) | 291, 1865 |
| SpeI | ACTAGT | 1 cut(s) | 337 |
| SsiI | CCGC | 3 cut(s) | 311, 1686, 2501 |
| SspMI | CTAG | 9 cut(s) | 63, 107, 338, 507, 966, 1773, 1808, 2298, 2484 |
| StyD4I | CCNGG | 3 cut(s) | 973, 1150, 2193 |
| StyI | CCWWGG | 3 cut(s) | 558, 1580, 1731 |
| TaaI | ACNGT | 3 cut(s) | 1855, 1876, 2042 |
| TaiI | ACGT | 1 cut(s) | 2412 |
| TatI | WGTACW | 1 cut(s) | 1810 |
| TfiI | GAWTC | 5 cut(s) | 121, 969, 1296, 1973, 2600 |
| TscAI | CASTG | 2 cut(s) | 156, 2047 |
| TseFI | GTSAC | 3 cut(s) | 151, 1876, 2209 |
| TseI | GCWGC | 7 cut(s) | 89, 92, 95, 455, 2051, 2672, 2675 |
| Tsp45I | GTSAC | 3 cut(s) | 151, 1876, 2209 |
| TspGWI | ACGGA | 1 cut(s) | 1298 |
| TspRI | CASTG | 2 cut(s) | 156, 2047 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1088, 1179 |
| VpaK11BI | GGWCC | 4 cut(s) | 935, 1136, 1591, 2329 |
| VspI | ATTAAT | 3 cut(s) | 180, 1038, 1821 |
| XapI | RAATTY | 6 cut(s) | 640, 716, 1117, 1432, 2416, 2581 |
| XbaI | TCTAGA | 1 cut(s) | 2483 |
| XceI | RCATGY | 2 cut(s) | 1128, 1333 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 662 |
| XhoI | CTCGAG | 1 cut(s) | 1865 |
| XmnI | GAANNNNTTC | 3 cut(s) | 915, 1671, 2084 |
| XspI | CTAG | 9 cut(s) | 63, 107, 338, 507, 966, 1773, 1808, 2298, 2484 |
| ZrmI | AGTACT | 1 cut(s) | 1812 |
| Zsp2I | ATGCAT | 1 cut(s) | 2694 |