FvH4_2g11280

Glutamate receptor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
9807783 .. 9811244
3462 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g11280.t1

Sequence Viewer

Length: 2817 bp
ATGCTCAAGAAAACCAAAAATCTTGTTCTTGCTTTCGTGTTTGTGTCTTCATGGATTTGCGTGGCCATGGCAGAAAACACAACGAGTACAATCCCAGTGAACGTTGGTGTTGTTCTTGATATAAATAGAGAGTATGGGACGGTTTGGTTGAGTTGCATCAAAATGGCCCTCTCAGACTTCTATGCATCTCATGCTCACTACAAAACAAGGCTGGTGCTGAACATTAGGGACTCGGAGAGCAACGTTGTACGTGCAGCTGATGCAGCTCTAGATTTGATAAAGAATAAGCAAGTGCAAGCCATTCTAGGACCCGTGACGTCGATGGATGCAAGCTTTGTTATTAACTTGGGCGACCAGGCTCAAGTGCCAATTATTTCATTTTCTGCATCAAGTCCATCTCTTAATTCACTCCGCAGCTCCTATTTTTTCCAAATTACACAGGTAGACTCCTCCCAAGTGAATGCCATAAGTTCTATAGTCCAAAATTTCGGTTGGAGACAAGTTGTACCTATCTATGTAGACACTGAATATGGGGATGCAGTCATACCTTTTCTAACTGATGCACTGCAAGAGGTTGATGTTCGTGTCACATATCGAAGCGCAGTTTCCCCACTTGCCACTGATGATCAAATTCTTCAAGAACTGCGTAAGTTAATGACCATGCAAACCAGAGTCTTCATTGTTCATATGAATCCCAAGCTCGGTTGTAGGCTGTTTGCCAAGGCAAAAGAGATTGGAATGATGGGTCAAGGATATGTTTGGATCATGACTAATGGGTTAGCCAATCGGTTAATATCGATGAATTCCACAGTCATAAATTCCATGCAAGGTGTAATAGGTGTACAAACATACGTTGCTCAAACACAGAAGCTTGAAGAATTCAACTTACGGTGGAAGCAACAATCCATGCAAGACGACCATTCAACTCTTATTGATGTTGATCAACTGGATGTCCTAGCACTTTGGGCTTATGACGCAGCTTTTGCACTAGCCATGGCAATCGAAGAAGTCGGGATCACAACTACTTTCGACTTGTTCCAAAAGAAGAACTCCTCCTCCTCCTCCTCCTCCTTCAATTTGACAGATTTTGGGAGTGCTGAGATATCTAAATATGGTCCAGATCTCTGCCGAGCCCTTTCGAAAACTAGATTTGAAGGCATAGCTGGAAATTTCAGCATTGTTGATGGACAACTTCAGTCATCAACGTTCCGTATAGTGAATATTAATGAGGATGGAGCAAGAGATATCGGATTTTGGACACCACAAAATGGACTGGTGAACAGTTTGAATTCCGCAAGCAAAACCATACTCTCAACTGATTCGAAGTCTAACCTGAAATCCAGTGTTATATGGCCTGGAGAATTTCTCTCTACTCCGAAGGGATGGGAGATCCCAACAAATGGCAAGCGGTTGAGAATAGGAGTTCCTGTTAATTTCGGTGTTCTTGAGTTTGTGAGGGTTACAAAAGATCCAAGCTCAAATACAACTGAAGTCACAGGGTTTTCTATTGATGTCTTTAAGGCAGCAATAGACGTATTGCCATATCCTCTTCCGTATGAGTTCATTCCTTATGAAAAACCTAATGACTCTGTCGCCGCAACTTACAACGATTTGTGCTATCAAGTATATCTTGGGAAGTTTGATGCTGTGGTGGGAGATGTAACAATTCGAGCAATGAGGTCATTGTATGTGGACTTTACAATGCCATACACAGAATCAGGCGTAGTAATGGTTGTGCCGATCTTCGACACCAGGGCCAAAAATGCATGGGTATTCTTGAAGCCTTTGACATGGGATCTTTGGCTAACAACTTCATGTTTCTTTCTTTTCATTGGTTTTGTGGTTTGGGTTCTAGAGCATCGAATCAATGAAGATTTTCGTGGCCCTCCCTCGCATCAAGTCGGCACCAGTGTCTGGTTCTCCTTCTCAACCATGGTGTTTTCACAAAGAGAGAGAGTGCTCAGCAATTTGGGAAGATTTGTGATGATCATATGGGTATTTGTTTTGTTAATACTGACACAAAGTTACACGGCTAACCTAGCTTCACTATTAACAGTCCAGCAACTTCAACCGACTGTTACCGATATAAAAGACATTTTGAGGAAGGGAGAAAACGTGGGATATAGGAGCACTGCTTATACTTATGATCTACTGAAACAAGTAGGTTTTGACGATTCCAAGCTTAAAGGCCTTACAACAGTTGAAGAAATTCAAGAAGCTCTCACAAAAGGGAGTCCAAATGGTGGCATTGCTGCTTTTGTCGACGAAACCCCTTACACAAAGCTTCTTCTAGCCAAATATTGTTCCAAGTTCACAATGGTCGGACCTATCTTCAAAACAGTTGGCTTTGGCTTTGTGTTTCCAAAACGTTCGCCTCTTGTGCCTGACGTTTCACGAGCAGTGCTAAACGTGACAGAAGGAGATAAGATATTGAACATTGGAAACAAATGGTTCAAGAAAGAAGAAAGCAATTGTCAAGACTCTAGTACTCAATCAGTTTCTAGCAACAGTCTAGGGCTTGCTAGCTTTTGGGGCTTATTCTTGATTGCAGGGCTGGCTTCAATAGTCGCACTCATCATCTTTATTGCTTCGTTCCTCCACAAGCATAAAACTATGATCCCTTCTGACTCGGGAGCCTCTAGATGGAGAAGGTGGCAGATCATGTTTGAAATCTTCAACCAAAAGGACCTTGACTCTCACACTTTTAAAACAAGTCAGGAACGAGATTCAGTTCAATCCCCAGTGAACTATAATTCAAGCCACACAGAGATACATTCTGCATCTTCTGTATCTTTTGAAGAACATGAAATACCATAA

Protein Analysis

939

Amino Acids

104.66

Weight (kDa)

6.13

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 34 - 390 4.8e-23 Periplasmic binding protein
ANF_receptor PF01094 50 - 410 1.3e-81 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 490 - 578 7.7e-06 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 494 - 819 3.7e-07 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 597 - 853 9.2e-41 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 320
AccB1I GGYRCC 1 cut(s) 1904
AccB7I CCANNNNNTGG 4 cut(s) 1268, 1400, 1914, 2243
AccI GTMKAC 3 cut(s) 444, 519, 2262
AciI CCGC 4 cut(s) 412, 1293, 1408, 1596
AclI AACGTT 4 cut(s) 102, 243, 1205, 2368
AclWI GGATC 6 cut(s) 770, 1022, 1384, 1463, 1803, 2611
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 9 cut(s) 484, 630, 802, 817, 878, 1168, 1288, 1361, 2208
AcuI CTGAAG 2 cut(s) 1178, 1509
AcyI GRCGYC 1 cut(s) 317
AfaI GTAC 5 cut(s) 88, 249, 507, 843, 2488
AfiI CCNNNNNNNGG 6 cut(s) 701, 1268, 1400, 1914, 2243, 2643
AjnI CCWGG 3 cut(s) 354, 1354, 1751
AloI GAACNNNNNNTCC 2 cut(s) 1040, 1072
Alw21I GWGCWC 2 cut(s) 1962, 2132
Alw26I GTCTC 1 cut(s) 490
AlwI GGATC 6 cut(s) 770, 1022, 1384, 1463, 1803, 2611
AlwNI CAGNNNCTG 1 cut(s) 1914
Ama87I CYCGRG 1 cut(s) 2629
AoxI GGCC 6 cut(s) 63, 165, 1352, 1755, 1882, 2188
ApeKI GCWGC 6 cut(s) 254, 263, 414, 977, 1523, 2252
ApoI RAATTY 9 cut(s) 484, 630, 802, 817, 878, 1168, 1288, 1361, 2208
ArsI GACNNNNNNTTYG 2 cut(s) 965, 997
AseI ATTAAT 1 cut(s) 1224
Asp700I GAANNNNTTC 2 cut(s) 1875, 2208
AspLEI GCGC 1 cut(s) 602
AspS9I GGNCC 7 cut(s) 166, 308, 1115, 1755, 1883, 2324, 2686
AsuHPI GGTGA 1 cut(s) 1288
AsuII TTCGAA 2 cut(s) 1139, 1322
AsuNHI GCTAGC 1 cut(s) 2522
AvaI CYCGRG 1 cut(s) 2629
AvaII GGWCC 4 cut(s) 308, 1115, 2324, 2686
BalI TGGCCA 1 cut(s) 65
BanI GGYRCC 1 cut(s) 1904
BanII GRGCYC 1 cut(s) 1135
BauI CACGAG 1 cut(s) 2394
BbsI GAAGAC 2 cut(s) 39, 667
Bbv12I GWGCWC 2 cut(s) 1962, 2132
BbvI GCAGC 6 cut(s) 266, 275, 426, 989, 1535, 2239
BccI CCATC 7 cut(s) 316, 403, 736, 1178, 1226, 1377, 2637
BceAI ACGGC 1 cut(s) 2046
BciT130I CCWGG 3 cut(s) 356, 1356, 1753
BclI TGATCA 3 cut(s) 625, 940, 1986
BcoDI GTCTC 1 cut(s) 490
BfmI CTRYAG 1 cut(s) 474
BglII AGATCT 1 cut(s) 1120
BisI GCNGC 7 cut(s) 255, 264, 415, 978, 1524, 1596, 2253
BlpI GCTNAGC 1 cut(s) 1961
BlsI GCNGC 7 cut(s) 256, 265, 416, 979, 1525, 1597, 2254
BmcAI AGTACT 1 cut(s) 2488
Bme1390I CCNGG 3 cut(s) 356, 1356, 1753
Bme18I GGWCC 4 cut(s) 308, 1115, 2324, 2686
BmeT110I CYCGRG 1 cut(s) 2629
BmgT120I GGNCC 7 cut(s) 166, 308, 1115, 1755, 1883, 2324, 2686
BmiI GGNNCC 3 cut(s) 310, 1906, 2635
BmrFI CCNGG 3 cut(s) 356, 1356, 1753
BmrI ACTGGG 2 cut(s) 89, 2735
BmtI GCTAGC 1 cut(s) 2526
BmuI ACTGGG 2 cut(s) 89, 2735
BpiI GAAGAC 2 cut(s) 39, 667
BplI GAGNNNNNCTC 2 cut(s) 1350, 1382
BpmI CTGGAG 1 cut(s) 1377
Bpu1102I GCTNAGC 1 cut(s) 1961
Bpu14I TTCGAA 2 cut(s) 1139, 1322
BpuEI CTTGAG 2 cut(s) 345, 1466
Bsa29I ATCGAT 1 cut(s) 797
BsaAI YACGTR 1 cut(s) 251
BsaBI GATNNNNATC 1 cut(s) 939
BsaHI GRCGYC 1 cut(s) 317
BsaJI CCNNGG 5 cut(s) 66, 720, 993, 1752, 1932
BsaXI ACNNNNNCTCC 6 cut(s) 1040, 1070, 1413, 1443, 2100, 2130
Bsc4I CCNNNNNNNGG 6 cut(s) 701, 1268, 1400, 1914, 2243, 2643
Bse1I ACTGG 6 cut(s) 95, 951, 1278, 1341, 1908, 2741
Bse3DI GCAATG 2 cut(s) 1680, 2247
Bse8I GATNNNNATC 1 cut(s) 939
BseBI CCWGG 3 cut(s) 356, 1356, 1753
BseCI ATCGAT 1 cut(s) 797
BseDI CCNNGG 5 cut(s) 66, 720, 993, 1752, 1932
BseGI GGATG 5 cut(s) 331, 541, 955, 1237, 1388
BseJI GATNNNNATC 1 cut(s) 939
BseLI CCNNNNNNNGG 6 cut(s) 701, 1268, 1400, 1914, 2243, 2643
BseMI GCAATG 2 cut(s) 1680, 2247
BseMII CTCAG 3 cut(s) 186, 1089, 1975
BseNI ACTGG 6 cut(s) 95, 951, 1278, 1341, 1908, 2741
BseRI GAGGAG 7 cut(s) 439, 1042, 1045, 1048, 1051, 1054, 1057
BseXI GCAGC 6 cut(s) 266, 275, 426, 989, 1535, 2239
BsgI GTGCAG 1 cut(s) 273
BshFI GGCC 6 cut(s) 65, 167, 1354, 1757, 1884, 2190
BshNI GGYRCC 1 cut(s) 1904
BshVI ATCGAT 1 cut(s) 797
BsiHKAI GWGCWC 2 cut(s) 1962, 2132
BsiHKCI CYCGRG 1 cut(s) 2629
BslFI GGGAC 2 cut(s) 151, 242
BslI CCNNNNNNNGG 6 cut(s) 701, 1268, 1400, 1914, 2243, 2643
BsmAI GTCTC 1 cut(s) 490
BsmFI GGGAC 2 cut(s) 151, 242
BsmI GAATGC 1 cut(s) 466
BsnI GGCC 6 cut(s) 65, 167, 1354, 1757, 1884, 2190
BsoBI CYCGRG 1 cut(s) 2629
Bsp119I TTCGAA 2 cut(s) 1139, 1322
Bsp1286I GDGCHC 3 cut(s) 1135, 1962, 2132
Bsp1407I TGTACA 1 cut(s) 841
Bsp1720I GCTNAGC 1 cut(s) 1961
Bsp19I CCATGG 3 cut(s) 66, 993, 1932
BspACI CCGC 4 cut(s) 412, 1293, 1408, 1596
BspANI GGCC 6 cut(s) 65, 167, 1354, 1757, 1884, 2190
BspCNI CTCAG 3 cut(s) 185, 1090, 1974
BspDI ATCGAT 1 cut(s) 797
BspHI TCATGA 1 cut(s) 765
BspLI GGNNCC 3 cut(s) 310, 1906, 2635
BspOI GCTAGC 1 cut(s) 2526
BspPI GGATC 6 cut(s) 770, 1022, 1384, 1463, 1803, 2611
BspT104I TTCGAA 2 cut(s) 1139, 1322
BspT107I GGYRCC 1 cut(s) 1904
BsrDI GCAATG 2 cut(s) 1680, 2247
BsrGI TGTACA 1 cut(s) 841
BsrI ACTGG 6 cut(s) 95, 951, 1278, 1341, 1908, 2741
BssECI CCNNGG 5 cut(s) 66, 720, 993, 1752, 1932
BssNI GRCGYC 1 cut(s) 317
BssSI CACGAG 1 cut(s) 2394
BssT1I CCWWGG 4 cut(s) 66, 720, 993, 1932
Bst2BI CACGAG 1 cut(s) 2394
Bst2UI CCWGG 3 cut(s) 356, 1356, 1753
Bst4CI ACNGT 9 cut(s) 142, 811, 891, 1283, 2056, 2077, 2200, 2341, 2510
Bst6I CTCTTC 1 cut(s) 1554
BstACI GRCGYC 1 cut(s) 317
BstAPI GCANNNNNTGC 3 cut(s) 191, 260, 983
BstAUI TGTACA 1 cut(s) 841
BstBAI YACGTR 1 cut(s) 251
BstBI TTCGAA 2 cut(s) 1139, 1322
BstC8I GCNNGC 7 cut(s) 297, 331, 1297, 1406, 2520, 2524, 2556
BstDEI CTNAG 3 cut(s) 172, 1098, 1961
BstDSI CCRYGG 3 cut(s) 66, 993, 1932
BstF5I GGATG 5 cut(s) 331, 541, 955, 1237, 1388
BstHHI GCGC 1 cut(s) 602
BstMAI GTCTC 1 cut(s) 490
BstNI CCWGG 3 cut(s) 356, 1356, 1753
BstSCI CCNGG 3 cut(s) 354, 1354, 1751
BstSFI CTRYAG 1 cut(s) 474
BstV1I GCAGC 6 cut(s) 266, 275, 426, 989, 1535, 2239
BstV2I GAAGAC 2 cut(s) 39, 667
BstX2I RGATCY 4 cut(s) 1120, 1389, 1468, 1795
BstYI RGATCY 4 cut(s) 1120, 1389, 1468, 1795
Bsu15I ATCGAT 1 cut(s) 797
BsuRI GGCC 6 cut(s) 65, 167, 1354, 1757, 1884, 2190
BsuTUI ATCGAT 1 cut(s) 797
BtgI CCRYGG 3 cut(s) 66, 993, 1932
BtsCI GGATG 5 cut(s) 331, 541, 955, 1237, 1388
BtsI GCAGTG 3 cut(s) 563, 2130, 2406
BtsIMutI CAGTG 9 cut(s) 102, 522, 563, 618, 1348, 1915, 2130, 2406, 2748
Cac8I GCNNGC 7 cut(s) 297, 331, 1297, 1406, 2520, 2524, 2556
CaiI CAGNNNCTG 1 cut(s) 1914
CciI TCATGA 1 cut(s) 765
CfoI GCGC 1 cut(s) 602
Cfr13I GGNCC 7 cut(s) 166, 308, 1115, 1755, 1883, 2324, 2686
ClaI ATCGAT 1 cut(s) 797
CseI GACGC 1 cut(s) 983
Csp6I GTAC 5 cut(s) 87, 248, 506, 842, 2487
CviQI GTAC 5 cut(s) 87, 248, 506, 842, 2487
DdeI CTNAG 3 cut(s) 172, 1098, 1961
DraI TTTAAA 1 cut(s) 2707
EaeI YGGCCR 1 cut(s) 63
Eam1104I CTCTTC 1 cut(s) 1554
EarI CTCTTC 1 cut(s) 1554
Eco130I CCWWGG 4 cut(s) 66, 720, 993, 1932
Eco147I AGGCCT 1 cut(s) 2190
Eco24I GRGCYC 1 cut(s) 1135
Eco32I GATATC 2 cut(s) 1104, 1246
Eco47I GGWCC 4 cut(s) 308, 1115, 2324, 2686
Eco57I CTGAAG 2 cut(s) 1178, 1509
Eco88I CYCGRG 1 cut(s) 2629
EcoO109I RGGNCCY 2 cut(s) 308, 2686
EcoRI GAATTC 3 cut(s) 802, 878, 1288
EcoRII CCWGG 3 cut(s) 354, 1354, 1751
EcoRV GATATC 2 cut(s) 1104, 1246
EcoT14I CCWWGG 4 cut(s) 66, 720, 993, 1932
EcoT22I ATGCAT 2 cut(s) 187, 1768
EcoT38I GRGCYC 1 cut(s) 1135
ErhI CCWWGG 4 cut(s) 66, 720, 993, 1932
FalI AAGNNNNNCTT 2 cut(s) 1614, 1646
FaqI GGGAC 2 cut(s) 151, 242
FauNDI CATATG 2 cut(s) 687, 1991
FbaI TGATCA 3 cut(s) 625, 940, 1986
FblI GTMKAC 3 cut(s) 444, 519, 2262
Fnu4HI GCNGC 7 cut(s) 255, 264, 415, 978, 1524, 1596, 2253
FokI GGATG 5 cut(s) 338, 548, 962, 1244, 1395
FriOI GRGCYC 1 cut(s) 1135
Fsp4HI GCNGC 7 cut(s) 255, 264, 415, 978, 1524, 1596, 2253
GlaI GCGC 1 cut(s) 601
GluI GCNGC 7 cut(s) 255, 264, 415, 978, 1524, 1596, 2253
GsuI CTGGAG 1 cut(s) 1377
HaeIII GGCC 6 cut(s) 65, 167, 1354, 1757, 1884, 2190
HgaI GACGC 1 cut(s) 983
HhaI GCGC 1 cut(s) 602
Hin1I GRCGYC 1 cut(s) 317
Hin6I GCGC 1 cut(s) 600
HinP1I GCGC 1 cut(s) 600
HincII GTYRAC 1 cut(s) 2263
HindII GTYRAC 1 cut(s) 2263
HindIII AAGCTT 4 cut(s) 331, 869, 2180, 2282
HphI GGTGA 1 cut(s) 1288
Hpy166II GTNNAC 9 cut(s) 100, 445, 520, 842, 1279, 1693, 2263, 2313, 2746
Hpy188I TCNGA 6 cut(s) 175, 235, 1250, 1377, 2324, 2626
Hpy8I GTNNAC 9 cut(s) 100, 445, 520, 842, 1279, 1693, 2263, 2313, 2746
Hpy99I CGWCG 2 cut(s) 322, 2267
HpyAV CCTTC 8 cut(s) 1081, 1148, 1372, 1933, 2098, 2411, 2631, 2643
HpyCH4III ACNGT 9 cut(s) 142, 811, 891, 1283, 2056, 2077, 2200, 2341, 2510
HpyF3I CTNAG 3 cut(s) 172, 1098, 1961
Hsp92I GRCGYC 1 cut(s) 317
HspAI GCGC 1 cut(s) 600
Ksp22I TGATCA 3 cut(s) 625, 940, 1986
LmnI GCTCC 4 cut(s) 422, 1235, 2127, 2633
Lsp1109I GCAGC 6 cut(s) 266, 275, 426, 989, 1535, 2239
MaeIII GTNAC 8 cut(s) 313, 586, 1459, 1492, 1660, 2024, 2077, 2410
MfeI CAATTG 1 cut(s) 2470
MflI RGATCY 4 cut(s) 1120, 1389, 1468, 1795
MhlI GDGCHC 3 cut(s) 1135, 1962, 2132
MlsI TGGCCA 1 cut(s) 65
MluNI TGGCCA 1 cut(s) 65
MlyI GAGTC 8 cut(s) 224, 440, 681, 1580, 2242, 2474, 2621, 2687
MmeI TCCRAC 2 cut(s) 473, 2302
Mox20I TGGCCA 1 cut(s) 65
Mph1103I ATGCAT 2 cut(s) 187, 1768
MroXI GAANNNNTTC 2 cut(s) 1875, 2208
MscI TGGCCA 1 cut(s) 65
MslI CAYNNNNRTG 1 cut(s) 161
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 257
MspR9I CCNGG 3 cut(s) 356, 1356, 1753
MunI CAATTG 1 cut(s) 2470
Mva1269I GAATGC 1 cut(s) 466
MvaI CCWGG 3 cut(s) 356, 1356, 1753
NcoI CCATGG 3 cut(s) 66, 993, 1932
NdeI CATATG 2 cut(s) 687, 1991
NheI GCTAGC 1 cut(s) 2522
NlaIV GGNNCC 3 cut(s) 310, 1906, 2635
NmeAIII GCCGAG 1 cut(s) 1154
NmuCI GTSAC 4 cut(s) 313, 586, 1492, 2410
NsiI ATGCAT 2 cut(s) 187, 1768
NspV TTCGAA 2 cut(s) 1139, 1322
PagI TCATGA 1 cut(s) 765
PceI AGGCCT 1 cut(s) 2190
PctI GAATGC 1 cut(s) 466
PdmI GAANNNNTTC 2 cut(s) 1875, 2208
PfeI GAWTC 6 cut(s) 691, 1319, 1715, 1863, 2174, 2726
PflFI GACNNNGTC 1 cut(s) 1589
PflMI CCANNNNNTGG 4 cut(s) 1268, 1400, 1914, 2243
PkrI GCNGC 7 cut(s) 256, 265, 416, 979, 1525, 1597, 2254
PleI GAGTC 8 cut(s) 224, 440, 680, 1580, 2241, 2474, 2621, 2687
PpsI GAGTC 8 cut(s) 224, 440, 680, 1580, 2241, 2474, 2621, 2687
Ppu21I YACGTR 1 cut(s) 251
PpuMI RGGWCCY 2 cut(s) 308, 2686
PshBI ATTAAT 1 cut(s) 1224
Psp1406I AACGTT 4 cut(s) 102, 243, 1205, 2368
Psp5II RGGWCCY 2 cut(s) 308, 2686
Psp6I CCWGG 3 cut(s) 354, 1354, 1751
PspGI CCWGG 3 cut(s) 354, 1354, 1751
PspN4I GGNNCC 3 cut(s) 310, 1906, 2635
PspPI GGNCC 7 cut(s) 166, 308, 1115, 1755, 1883, 2324, 2686
PspPPI RGGWCCY 2 cut(s) 308, 2686
PsrI GAACNNNNNNTAC 1 cut(s) 2793
PstNI CAGNNNCTG 1 cut(s) 1914
PsuI RGATCY 4 cut(s) 1120, 1389, 1468, 1795
PsyI GACNNNGTC 1 cut(s) 1589
PvuII CAGCTG 1 cut(s) 257
RsaI GTAC 5 cut(s) 88, 249, 507, 843, 2488
RsaNI GTAC 5 cut(s) 87, 248, 506, 842, 2487
RseI CAYNNNNRTG 1 cut(s) 161
SalI GTCGAC 1 cut(s) 2261
SatI GCNGC 7 cut(s) 255, 264, 415, 978, 1524, 1596, 2253
Sau96I GGNCC 7 cut(s) 166, 308, 1115, 1755, 1883, 2324, 2686
ScaI AGTACT 1 cut(s) 2488
SchI GAGTC 8 cut(s) 224, 440, 681, 1580, 2242, 2474, 2621, 2687
ScrFI CCNGG 3 cut(s) 356, 1356, 1753
SduI GDGCHC 3 cut(s) 1135, 1962, 2132
SfcI CTRYAG 1 cut(s) 474
SfuI TTCGAA 2 cut(s) 1139, 1322
SinI GGWCC 4 cut(s) 308, 1115, 2324, 2686
SmiMI CAYNNNNRTG 1 cut(s) 161
SmlI CTYRAG 3 cut(s) 5, 360, 1445
SmoI CTYRAG 3 cut(s) 5, 360, 1445
SseBI AGGCCT 1 cut(s) 2190
SsiI CCGC 4 cut(s) 412, 1293, 1408, 1596
SspI AATATT 2 cut(s) 1222, 2300
StuI AGGCCT 1 cut(s) 2190
StyD4I CCNGG 3 cut(s) 354, 1354, 1751
StyI CCWWGG 4 cut(s) 66, 720, 993, 1932
TaaI ACNGT 9 cut(s) 142, 811, 891, 1283, 2056, 2077, 2200, 2341, 2510
TatI WGTACW 3 cut(s) 86, 841, 2486
TauI GCSGC 1 cut(s) 1598
TfiI GAWTC 6 cut(s) 691, 1319, 1715, 1863, 2174, 2726
TscAI CASTG 9 cut(s) 102, 529, 570, 625, 1348, 1915, 2137, 2406, 2748
TseFI GTSAC 4 cut(s) 313, 586, 1492, 2410
TseI GCWGC 6 cut(s) 254, 263, 414, 977, 1523, 2252
Tsp45I GTSAC 4 cut(s) 313, 586, 1492, 2410
TspGWI ACGGA 2 cut(s) 1199, 1542
TspRI CASTG 9 cut(s) 102, 529, 570, 625, 1348, 1915, 2137, 2406, 2748
Tth111I GACNNNGTC 1 cut(s) 1589
Van91I CCANNNNNTGG 4 cut(s) 1268, 1400, 1914, 2243
VpaK11BI GGWCC 4 cut(s) 308, 1115, 2324, 2686
VspI ATTAAT 1 cut(s) 1224
XapI RAATTY 9 cut(s) 484, 630, 802, 817, 878, 1168, 1288, 1361, 2208
XbaI TCTAGA 3 cut(s) 268, 1852, 2639
XcmI CCANNNNNNNNNTGG 1 cut(s) 2314
XmiI GTMKAC 3 cut(s) 444, 519, 2262
XmnI GAANNNNTTC 2 cut(s) 1875, 2208
ZraI GACGTC 1 cut(s) 318
ZrmI AGTACT 1 cut(s) 2488
Zsp2I ATGCAT 2 cut(s) 187, 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.