Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000893.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

101386 .. 104424

Gene Structure 3039 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000893.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

atggagacgagcttcgttattaatcttggaaacgaagctcatgtgcccatcatatcattttcatcaacaagcccttctcttacttcgatccggagctcctactttttccaatttgcacaaaatgactcaatccaagtgaaagttataagttccattgtaaaagcttttgggtggagacaagttgtgccgatccacatagacactgcatacggcgaggcaatcataccatacttaactgatgccttggatgaggttggggcccgggttccctaccgtagtgtcatttccccatccgcaacagacgatcaaattgaaaaagagctttacaagttgatgacaatgcaaactagagtttttcttgtccacatgacaacctcactatgctctagggtactttacaaggcaaaagcaattggaatgatgagcgagggatatgtttggatcatgaccagtgggataactaatagattaaggatgacggacgacttttcattcctcaattccttggacggaatattaggtgttcaaacctatgtcccaaaaacaaaagaacttcatcaagagttcataccacggtggcatctgcagttcctaaaagacactccagctaacagtttttctgctaacttggatgtttttgcactatgggcttatgatgctgctcatgcactggccatagcaattgaagaagtaacttggagtacaagtaacattgatttccaaaagtcacatactgctcccaacaactcgacagatcttgaaagtctggcggtctctcagtatgggccaaaactatgcaaagcactctcaactactagatttaatggcattgctggagattttagacttgttgataggcaacttcaatcctcaacttttcagattgttaacatatatggtggtgcaacaagaacaatcggattttggacaccagaaaatggactgtgtaaaaagttgggctcctcagtaaacacaggaaaaggttcaatttccaatggcaatctgggacccattatatggccaggagattctctttctgttcccaagggatgggagataccaacaaatggcaagaagttgagaattgcagttcctcagaaagttggttttactgagttcgttaagatcacaaaagatccaagcacaaacataacagatgtctctgggttcagtattgatgtctttgaggctgcgctcgagatattgccatatgctcttccctatgaatttattccctttgcaaagcccgatggcaccactgctggcaataacaatgatttgtgctatcaagtttctattgggaactttgatgctatagtgggagatacaacaattacagcaaataggtccttgtttgtagactttaccatgccatatacagaagctggtatagtcatggttgtaccgaaactccagccaaccgttactgatataaaggatctattaaagaaaggggagaaagttggtcatgtaaggaattatgttcgtgacatgttgaagcaaaaaggttttgatgattcaaagcttaagcgttttacaactgtggaagaaattgatgacgcgctttcaaaagggagtgcaaatggtggagtggctggtgttattgatgaaactcccaacctgaagctttttcttgcaaagtattgcaacaaatatactatggtcggacccttttttagaactgatggttttgcctttgcgtttccaaaaggttccccttttctacaagatgtttcacaggcagtcctaaacgtgaccgggggagagaagataatgaaaattgaaaataaatggttcaagaaagaaagcagctgtcaagacttgactaacccaaacattaatagcaatggtcttggtgttgatagcttttgggtcttatttctcattgtggcgggagcttcaatagtagctctgataatatttgtagtttcgtttatttacaggcataaggttatctggagttcagaaacctctatttggtgtaggattcaaaaaatgttaactatcttcaatgaaaaagacctgagctatcatacttttaatatcaatgaaaaggaagatgaagtgactgccttacctaactcctccccagaaagttctgtgcaccagaatttgaaccagggaaattcaaattctgtattttctggttctggagagcaacaagcagcaagggtctccatgagtagctgctgcaactcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

733

Amino Acids

81.0

Weight (kDa)

6.18

Isoelectric Point (pI)

32.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	146
AccB1I	GGYRCC	1 cut(s)	1253
AccB7I	CCANNNNNTGG	4 cut(s)	938, 1017, 1050, 1067
AccI	GTMKAC	1 cut(s)	1359
AccII	CGCG	1 cut(s)	1562
AccIII	TCCGGA	1 cut(s)	90
AciI	CCGC	3 cut(s)	294, 770, 1892
AclWI	GGATC	5 cut(s)	82, 184, 449, 1130, 1446
AcoI	YGGCCR	2 cut(s)	672, 1019
AcsI	RAATTY	4 cut(s)	1226, 2110, 2125, 2131
AcuI	CTGAAG	1 cut(s)	1643
AfaI	GTAC	3 cut(s)	393, 703, 1404
AfiI	CCNNNNNNNGG	5 cut(s)	938, 1017, 1050, 1067, 1977
AflII	CTTAAG	1 cut(s)	1526
AflIII	ACRYGT	1 cut(s)	1491
AjnI	CCWGG	2 cut(s)	1021, 2118
Alw21I	GWGCWC	2 cut(s)	98, 2106
Alw26I	GTCTC	4 cut(s)	169, 778, 1165, 2179
Alw44I	GTGCAC	1 cut(s)	2102
AlwI	GGATC	5 cut(s)	82, 184, 449, 1130, 1446
AlwNI	CAGNNNCTG	1 cut(s)	1385
Ama87I	CYCGRG	2 cut(s)	261, 1196
Aor13HI	TCCGGA	1 cut(s)	90
AoxI	GGCC	4 cut(s)	258, 672, 785, 1019
ApaI	GGGCCC	1 cut(s)	262
ApaLI	GTGCAC	1 cut(s)	2102
ApeKI	GCWGC	6 cut(s)	659, 1190, 1809, 2165, 2187, 2190
ApoI	RAATTY	4 cut(s)	1226, 2110, 2125, 2131
AseI	ATTAAT	2 cut(s)	21, 1839
Asp700I	GAANNNNTTC	2 cut(s)	982, 1230
AspLEI	GCGC	2 cut(s)	1195, 1564
AspS9I	GGNCC	6 cut(s)	258, 259, 785, 1007, 1347, 1667
AsuC2I	CCSGG	3 cut(s)	262, 263, 1759
AvaI	CYCGRG	2 cut(s)	261, 1196
AvaII	GGWCC	3 cut(s)	1007, 1347, 1667
BaeGI	GKGCMC	3 cut(s)	48, 262, 2106
BalI	TGGCCA	2 cut(s)	674, 1021
BanI	GGYRCC	1 cut(s)	1253
BanII	GRGCYC	3 cut(s)	98, 262, 962
Bbv12I	GWGCWC	2 cut(s)	98, 2106
BbvI	GCAGC	6 cut(s)	646, 1177, 1821, 2174, 2177, 2177
BccI	CCATC	5 cut(s)	56, 298, 1044, 1244, 1679
BceAI	ACGGC	1 cut(s)	226
BciT130I	CCWGG	2 cut(s)	1023, 2120
BcnI	CCSGG	3 cut(s)	262, 263, 1759
BcoDI	GTCTC	4 cut(s)	169, 778, 1165, 2179
BfaI	CTAG	3 cut(s)	348, 387, 816
BfmI	CTRYAG	2 cut(s)	584, 1314
BfrI	CTTAAG	1 cut(s)	1526
BglII	AGATCT	1 cut(s)	754
BisI	GCNGC	6 cut(s)	660, 1191, 1810, 2166, 2188, 2191
BlsI	GCNGC	6 cut(s)	661, 1192, 1811, 2167, 2189, 2192
Bme1390I	CCNGG	5 cut(s)	262, 263, 1023, 1759, 2120
Bme18I	GGWCC	3 cut(s)	1007, 1347, 1667
BmeT110I	CYCGRG	2 cut(s)	261, 1196
BmgT120I	GGNCC	6 cut(s)	258, 259, 785, 1007, 1347, 1667
BmiI	GGNNCC	9 cut(s)	259, 260, 267, 961, 1008, 1009, 1255, 1669, 1714
BmrFI	CCNGG	5 cut(s)	262, 263, 1023, 1759, 2120
BmsI	GCATC	4 cut(s)	229, 589, 646, 1300
BpmI	CTGGAG	5 cut(s)	588, 855, 1397, 1978, 2172
Bpu10I	CCTNAGC	1 cut(s)	2024
BpuMI	CCSGG	3 cut(s)	262, 263, 1759
BsaI	GGTCTC	2 cut(s)	778, 2179
BsaJI	CCNNGG	7 cut(s)	243, 261, 504, 572, 1044, 1758, 2119
BsaWI	WCCGGW	1 cut(s)	90
BsaXI	ACNNNNNCTCC	4 cut(s)	691, 721, 1395, 1425
Bsc4I	CCNNNNNNNGG	5 cut(s)	938, 1017, 1050, 1067, 1977
Bse1I	ACTGG	2 cut(s)	450, 675
Bse3DI	GCAATG	2 cut(s)	828, 1852
BseAI	TCCGGA	1 cut(s)	90
BseBI	CCWGG	2 cut(s)	1023, 2120
BseDI	CCNNGG	7 cut(s)	243, 261, 504, 572, 1044, 1758, 2119
BseGI	GGATG	5 cut(s)	253, 290, 480, 637, 1055
BseLI	CCNNNNNNNGG	5 cut(s)	938, 1017, 1050, 1067, 1977
BseMI	GCAATG	2 cut(s)	828, 1852
BseMII	CTCAG	5 cut(s)	791, 978, 1104, 1109, 2015
BseNI	ACTGG	2 cut(s)	450, 675
BseRI	GAGGAG	2 cut(s)	952, 2074
BseSI	GKGCMC	3 cut(s)	48, 262, 2106
BseXI	GCAGC	6 cut(s)	646, 1177, 1821, 2174, 2177, 2177
Bsh1236I	CGCG	1 cut(s)	1562
BshFI	GGCC	4 cut(s)	260, 674, 787, 1021
BshNI	GGYRCC	1 cut(s)	1253
BsiHKAI	GWGCWC	2 cut(s)	98, 2106
BsiHKCI	CYCGRG	2 cut(s)	261, 1196
BsiSI	CCGG	3 cut(s)	91, 262, 1758
BslFI	GGGAC	2 cut(s)	521, 1020
BslI	CCNNNNNNNGG	5 cut(s)	938, 1017, 1050, 1067, 1977
BsmAI	GTCTC	4 cut(s)	169, 778, 1165, 2179
BsmFI	GGGAC	2 cut(s)	521, 1020
BsnI	GGCC	4 cut(s)	260, 674, 787, 1021
Bso31I	GGTCTC	2 cut(s)	778, 2179
BsoBI	CYCGRG	2 cut(s)	261, 1196
Bsp120I	GGGCCC	1 cut(s)	258
Bsp1286I	GDGCHC	5 cut(s)	48, 98, 262, 962, 2106
Bsp13I	TCCGGA	1 cut(s)	90
Bsp143I	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
BspACI	CCGC	3 cut(s)	294, 770, 1892
BspANI	GGCC	4 cut(s)	260, 674, 787, 1021
BspCNI	CTCAG	5 cut(s)	790, 977, 1105, 1108, 2016
BspEI	TCCGGA	1 cut(s)	90
BspFNI	CGCG	1 cut(s)	1562
BspHI	TCATGA	1 cut(s)	444
BspLI	GGNNCC	9 cut(s)	259, 260, 267, 961, 1008, 1009, 1255, 1669, 1714
BspMAI	CTGCAG	1 cut(s)	588
BspPI	GGATC	5 cut(s)	82, 184, 449, 1130, 1446
BspQI	GCTCTTC	1 cut(s)	1221
BspT107I	GGYRCC	1 cut(s)	1253
BspTI	CTTAAG	1 cut(s)	1526
BspTNI	GGTCTC	2 cut(s)	778, 2179
BsrDI	GCAATG	2 cut(s)	828, 1852
BsrI	ACTGG	2 cut(s)	450, 675
BssECI	CCNNGG	7 cut(s)	243, 261, 504, 572, 1044, 1758, 2119
BssMI	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
BssT1I	CCWWGG	3 cut(s)	243, 504, 1044
Bst2UI	CCWGG	2 cut(s)	1023, 2120
Bst4CI	ACNGT	6 cut(s)	275, 576, 614, 945, 1423, 1543
Bst6I	CTCTTC	1 cut(s)	1221
BstAFI	CTTAAG	1 cut(s)	1526
BstC8I	GCNNGC	1 cut(s)	1264
BstDEI	CTNAG	5 cut(s)	777, 964, 1095, 1113, 2024
BstDSI	CCRYGG	1 cut(s)	572
BstF5I	GGATG	5 cut(s)	253, 290, 480, 637, 1055
BstFNI	CGCG	1 cut(s)	1562
BstHHI	GCGC	2 cut(s)	1195, 1564
BstKTI	GATC	8 cut(s)	90, 192, 307, 444, 757, 1128, 1138, 1441
BstMAI	GTCTC	4 cut(s)	169, 778, 1165, 2179
BstMBI	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
BstMWI	GCNNNNNNNGC	3 cut(s)	647, 656, 665
BstNI	CCWGG	2 cut(s)	1023, 2120
BstNSI	RCATGY	1 cut(s)	1495
BstSCI	CCNGG	5 cut(s)	260, 261, 1021, 1757, 2118
BstSFI	CTRYAG	2 cut(s)	584, 1314
BstSLI	GKGCMC	3 cut(s)	48, 262, 2106
BstUI	CGCG	1 cut(s)	1562
BstV1I	GCAGC	6 cut(s)	646, 1177, 1821, 2174, 2177, 2177
BstX2I	RGATCY	3 cut(s)	754, 1135, 1438
BstYI	RGATCY	3 cut(s)	754, 1135, 1438
BsuRI	GGCC	4 cut(s)	260, 674, 787, 1021
BtgI	CCRYGG	1 cut(s)	572
BtsCI	GGATG	5 cut(s)	253, 290, 480, 637, 1055
BtsI	GCAGTG	2 cut(s)	201, 1257
BtsIMutI	CAGTG	4 cut(s)	201, 457, 668, 1257
Cac8I	GCNNGC	1 cut(s)	1264
CaiI	CAGNNNCTG	1 cut(s)	1385
CciI	TCATGA	1 cut(s)	444
CfoI	GCGC	2 cut(s)	1195, 1564
Cfr13I	GGNCC	6 cut(s)	258, 259, 785, 1007, 1347, 1667
Cfr9I	CCCGGG	1 cut(s)	261
CseI	GACGC	1 cut(s)	1568
Csp6I	GTAC	3 cut(s)	392, 702, 1403
CviAII	CATG	9 cut(s)	41, 367, 445, 665, 1369, 1396, 1469, 1492, 2179
CviQI	GTAC	3 cut(s)	392, 702, 1403
DdeI	CTNAG	5 cut(s)	777, 964, 1095, 1113, 2024
DpnI	GATC	8 cut(s)	89, 191, 306, 443, 756, 1127, 1137, 1440
DpnII	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
EaeI	YGGCCR	2 cut(s)	672, 1019
Eam1104I	CTCTTC	1 cut(s)	1221
EarI	CTCTTC	1 cut(s)	1221
Ecl136II	GAGCTC	1 cut(s)	96
Eco130I	CCWWGG	3 cut(s)	243, 504, 1044
Eco24I	GRGCYC	3 cut(s)	98, 262, 962
Eco31I	GGTCTC	2 cut(s)	778, 2179
Eco47I	GGWCC	3 cut(s)	1007, 1347, 1667
Eco53kI	GAGCTC	1 cut(s)	96
Eco57I	CTGAAG	1 cut(s)	1643
Eco88I	CYCGRG	2 cut(s)	261, 1196
EcoICRI	GAGCTC	1 cut(s)	96
EcoO109I	RGGNCCY	3 cut(s)	258, 1007, 1347
EcoRII	CCWGG	2 cut(s)	1021, 2118
EcoT14I	CCWWGG	3 cut(s)	243, 504, 1044
EcoT38I	GRGCYC	3 cut(s)	98, 262, 962
ErhI	CCWWGG	3 cut(s)	243, 504, 1044
FaeI	CATG	9 cut(s)	44, 370, 448, 668, 1372, 1399, 1472, 1495, 2182
FaqI	GGGAC	2 cut(s)	521, 1020
FatI	CATG	9 cut(s)	40, 366, 444, 664, 1368, 1395, 1468, 1491, 2178
FauI	CCCGC	1 cut(s)	1885
FauNDI	CATATG	1 cut(s)	1210
FblI	GTMKAC	1 cut(s)	1359
Fnu4HI	GCNGC	6 cut(s)	660, 1191, 1810, 2166, 2188, 2191
FokI	GGATG	5 cut(s)	260, 277, 487, 644, 1062
FriOI	GRGCYC	3 cut(s)	98, 262, 962
Fsp4HI	GCNGC	6 cut(s)	660, 1191, 1810, 2166, 2188, 2191
FspBI	CTAG	3 cut(s)	348, 387, 816
GlaI	GCGC	2 cut(s)	1194, 1563
GluI	GCNGC	6 cut(s)	660, 1191, 1810, 2166, 2188, 2191
GsuI	CTGGAG	5 cut(s)	588, 855, 1397, 1978, 2172
HaeIII	GGCC	4 cut(s)	260, 674, 787, 1021
HapII	CCGG	3 cut(s)	91, 262, 1758
HgaI	GACGC	1 cut(s)	1568
HhaI	GCGC	2 cut(s)	1195, 1564
Hin1II	CATG	9 cut(s)	44, 370, 448, 668, 1372, 1399, 1472, 1495, 2182
Hin6I	GCGC	2 cut(s)	1193, 1562
HinP1I	GCGC	2 cut(s)	1193, 1562
HincII	GTYRAC	2 cut(s)	889, 2001
HindII	GTYRAC	2 cut(s)	889, 2001
HindIII	AAGCTT	3 cut(s)	162, 1523, 1625
HinfI	GANTC	4 cut(s)	125, 1028, 1517, 1987
HpaI	GTTAAC	2 cut(s)	889, 2001
HpaII	CCGG	3 cut(s)	91, 262, 1758
Hpy166II	GTNNAC	6 cut(s)	364, 889, 970, 1360, 2001, 2104
Hpy188I	TCNGA	6 cut(s)	882, 920, 1098, 1667, 1914, 1966
Hpy8I	GTNNAC	6 cut(s)	364, 889, 970, 1360, 2001, 2104
HpyAV	CCTTC	1 cut(s)	84
HpyCH4III	ACNGT	6 cut(s)	275, 576, 614, 945, 1423, 1543
HpyCH4IV	ACGT	1 cut(s)	1752
HpyF10VI	GCNNNNNNNGC	3 cut(s)	647, 656, 665
HpyF3I	CTNAG	5 cut(s)	777, 964, 1095, 1113, 2024
HpySE526I	ACGT	1 cut(s)	1752
Hsp92II	CATG	9 cut(s)	44, 370, 448, 668, 1372, 1399, 1472, 1495, 2182
HspAI	GCGC	2 cut(s)	1193, 1562
KflI	GGGWCCC	1 cut(s)	1007
Kpn2I	TCCGGA	1 cut(s)	90
KspAI	GTTAAC	2 cut(s)	889, 2001
Kzo9I	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
LguI	GCTCTTC	1 cut(s)	1221
LmnI	GCTCC	5 cut(s)	93, 101, 742, 965, 1895
Lsp1109I	GCAGC	6 cut(s)	646, 1177, 1821, 2174, 2177, 2177
LweI	GCATC	4 cut(s)	229, 589, 646, 1300
MaeI	CTAG	3 cut(s)	348, 387, 816
MaeII	ACGT	1 cut(s)	1752
MaeIII	GTNAC	7 cut(s)	691, 707, 726, 1423, 1487, 1753, 2065
MalI	GATC	8 cut(s)	89, 191, 306, 443, 756, 1127, 1137, 1440
MboI	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
MboII	GAAGA	6 cut(s)	698, 1208, 1559, 1780, 1999, 2069
MfeI	CAATTG	2 cut(s)	411, 681
MflI	RGATCY	3 cut(s)	754, 1135, 1438
MhlI	GDGCHC	5 cut(s)	48, 98, 262, 962, 2106
MlsI	TGGCCA	2 cut(s)	674, 1021
MluNI	TGGCCA	2 cut(s)	674, 1021
MlyI	GAGTC	1 cut(s)	119
MmeI	TCCRAC	1 cut(s)	1645
Mox20I	TGGCCA	2 cut(s)	674, 1021
MroI	TCCGGA	1 cut(s)	90
MroXI	GAANNNNTTC	2 cut(s)	982, 1230
MscI	TGGCCA	2 cut(s)	674, 1021
Msp20I	TGGCCA	2 cut(s)	674, 1021
MspA1I	CMGCKG	1 cut(s)	1812
MspCI	CTTAAG	1 cut(s)	1526
MspI	CCGG	3 cut(s)	91, 262, 1758
MspR9I	CCNGG	5 cut(s)	262, 263, 1023, 1759, 2120
MunI	CAATTG	2 cut(s)	411, 681
MvaI	CCWGG	2 cut(s)	1023, 2120
MvnI	CGCG	1 cut(s)	1562
MwoI	GCNNNNNNNGC	3 cut(s)	647, 656, 665
NciI	CCSGG	3 cut(s)	262, 263, 1759
NdeI	CATATG	1 cut(s)	1210
NdeII	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
NlaIII	CATG	9 cut(s)	44, 370, 448, 668, 1372, 1399, 1472, 1495, 2182
NlaIV	GGNNCC	9 cut(s)	259, 260, 267, 961, 1008, 1009, 1255, 1669, 1714
NmuCI	GTSAC	4 cut(s)	726, 1487, 1753, 2065
NspI	RCATGY	1 cut(s)	1495
PaeR7I	CTCGAG	1 cut(s)	1196
PagI	TCATGA	1 cut(s)	444
PciI	ACATGT	1 cut(s)	1491
PciSI	GCTCTTC	1 cut(s)	1221
PdmI	GAANNNNTTC	2 cut(s)	982, 1230
PfeI	GAWTC	3 cut(s)	1028, 1517, 1987
PflMI	CCANNNNNTGG	4 cut(s)	938, 1017, 1050, 1067
PkrI	GCNGC	6 cut(s)	661, 1192, 1811, 2167, 2189, 2192
PleI	GAGTC	1 cut(s)	119
PpsI	GAGTC	1 cut(s)	119
PpuMI	RGGWCCY	2 cut(s)	1007, 1347
PscI	ACATGT	1 cut(s)	1491
PshBI	ATTAAT	2 cut(s)	21, 1839
PsiI	TTATAA	1 cut(s)	146
Psp124BI	GAGCTC	1 cut(s)	98
Psp5II	RGGWCCY	2 cut(s)	1007, 1347
Psp6I	CCWGG	2 cut(s)	1021, 2118
PspGI	CCWGG	2 cut(s)	1021, 2118
PspN4I	GGNNCC	9 cut(s)	259, 260, 267, 961, 1008, 1009, 1255, 1669, 1714
PspOMI	GGGCCC	1 cut(s)	258
PspPI	GGNCC	6 cut(s)	258, 259, 785, 1007, 1347, 1667
PspPPI	RGGWCCY	2 cut(s)	1007, 1347
PstI	CTGCAG	1 cut(s)	588
PstNI	CAGNNNCTG	1 cut(s)	1385
PsuI	RGATCY	3 cut(s)	754, 1135, 1438
PvuII	CAGCTG	1 cut(s)	1812
RsaI	GTAC	3 cut(s)	393, 703, 1404
RsaNI	GTAC	3 cut(s)	392, 702, 1403
SacI	GAGCTC	1 cut(s)	98
SapI	GCTCTTC	1 cut(s)	1221
SatI	GCNGC	6 cut(s)	660, 1191, 1810, 2166, 2188, 2191
Sau3AI	GATC	8 cut(s)	87, 189, 304, 441, 754, 1125, 1135, 1438
Sau96I	GGNCC	6 cut(s)	258, 259, 785, 1007, 1347, 1667
SchI	GAGTC	1 cut(s)	119
ScrFI	CCNGG	5 cut(s)	262, 263, 1023, 1759, 2120
SduI	GDGCHC	5 cut(s)	48, 98, 262, 962, 2106
SfaNI	GCATC	4 cut(s)	229, 589, 646, 1300
SfcI	CTRYAG	2 cut(s)	584, 1314
Sfr274I	CTCGAG	1 cut(s)	1196
SinI	GGWCC	3 cut(s)	1007, 1347, 1667
SlaI	CTCGAG	1 cut(s)	1196
SmaI	CCCGGG	1 cut(s)	263
SmlI	CTYRAG	2 cut(s)	1196, 1526
SmoI	CTYRAG	2 cut(s)	1196, 1526
SsiI	CCGC	3 cut(s)	294, 770, 1892
SspI	AATATT	2 cut(s)	516, 1920
SspMI	CTAG	3 cut(s)	348, 387, 816
SstI	GAGCTC	1 cut(s)	98
StyD4I	CCNGG	5 cut(s)	260, 261, 1021, 1757, 2118
StyI	CCWWGG	3 cut(s)	243, 504, 1044
TaaI	ACNGT	6 cut(s)	275, 576, 614, 945, 1423, 1543
TaiI	ACGT	1 cut(s)	1755
TaqI	TCGA	3 cut(s)	86, 749, 1197
TatI	WGTACW	1 cut(s)	701
TfiI	GAWTC	3 cut(s)	1028, 1517, 1987
TscAI	CASTG	4 cut(s)	208, 457, 675, 1264
TseFI	GTSAC	4 cut(s)	726, 1487, 1753, 2065
TseI	GCWGC	6 cut(s)	659, 1190, 1809, 2165, 2187, 2190
Tsp45I	GTSAC	4 cut(s)	726, 1487, 1753, 2065
TspGWI	ACGGA	2 cut(s)	494, 525
TspMI	CCCGGG	1 cut(s)	261
TspRI	CASTG	4 cut(s)	208, 457, 675, 1264
Van91I	CCANNNNNTGG	4 cut(s)	938, 1017, 1050, 1067
Vha464I	CTTAAG	1 cut(s)	1526
VneI	GTGCAC	1 cut(s)	2102
VpaK11BI	GGWCC	3 cut(s)	1007, 1347, 1667
VspI	ATTAAT	2 cut(s)	21, 1839
XapI	RAATTY	4 cut(s)	1226, 2110, 2125, 2131
XceI	RCATGY	1 cut(s)	1495
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1000
XhoI	CTCGAG	1 cut(s)	1196
XmaI	CCCGGG	1 cut(s)	261
XmiI	GTMKAC	1 cut(s)	1359
XmnI	GAANNNNTTC	2 cut(s)	982, 1230
XspI	CTAG	3 cut(s)	348, 387, 816

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.