Glutamate receptor
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Lig_chan | PF00060 | 22 - 278 | 8.6e-36 | Ligand-gated ion channel |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 375 |
| AciI | CCGC | 1 cut(s) | 528 |
| AclWI | GGATC | 1 cut(s) | 899 |
| AcsI | RAATTY | 1 cut(s) | 930 |
| AcvI | CACGTG | 1 cut(s) | 659 |
| AfaI | GTAC | 2 cut(s) | 319, 985 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 921 |
| AflII | CTTAAG | 1 cut(s) | 458 |
| AflIII | ACRYGT | 1 cut(s) | 980 |
| AhlI | ACTAGT | 1 cut(s) | 680 |
| AjnI | CCWGG | 1 cut(s) | 243 |
| AluBI | AGCT | 7 cut(s) | 186, 740, 801, 845, 863, 900, 1117 |
| AluI | AGCT | 7 cut(s) | 186, 740, 801, 845, 863, 900, 1117 |
| Alw21I | GWGCWC | 1 cut(s) | 882 |
| Alw26I | GTCTC | 2 cut(s) | 957, 991 |
| AlwI | GGATC | 1 cut(s) | 899 |
| AoxI | GGCC | 3 cut(s) | 158, 808, 1070 |
| ApeKI | GCWGC | 3 cut(s) | 530, 566, 860 |
| ApoI | RAATTY | 1 cut(s) | 930 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 495, 725 |
| AspLEI | GCGC | 1 cut(s) | 1082 |
| AspS9I | GGNCC | 4 cut(s) | 4, 70, 124, 158 |
| AsuC2I | CCSGG | 1 cut(s) | 224 |
| AsuHPI | GGTGA | 2 cut(s) | 161, 1038 |
| AvaII | GGWCC | 3 cut(s) | 4, 70, 124 |
| BbrPI | CACGTG | 1 cut(s) | 659 |
| BbsI | GAAGAC | 4 cut(s) | 40, 153, 625, 713 |
| Bbv12I | GWGCWC | 1 cut(s) | 882 |
| BbvI | GCAGC | 3 cut(s) | 517, 553, 872 |
| BccI | CCATC | 3 cut(s) | 20, 512, 1081 |
| BciT130I | CCWGG | 1 cut(s) | 245 |
| BclI | TGATCA | 1 cut(s) | 261 |
| BcnI | CCSGG | 1 cut(s) | 224 |
| BcoDI | GTCTC | 2 cut(s) | 957, 991 |
| BcuI | ACTAGT | 1 cut(s) | 680 |
| BfaI | CTAG | 4 cut(s) | 249, 681, 737, 741 |
| BfmI | CTRYAG | 1 cut(s) | 762 |
| BfrI | CTTAAG | 1 cut(s) | 458 |
| BfuAI | ACCTGC | 1 cut(s) | 375 |
| BisI | GCNGC | 3 cut(s) | 531, 567, 861 |
| BlsI | GCNGC | 3 cut(s) | 532, 568, 862 |
| Bme1390I | CCNGG | 2 cut(s) | 224, 245 |
| Bme18I | GGWCC | 3 cut(s) | 4, 70, 124 |
| BmgT120I | GGNCC | 4 cut(s) | 4, 70, 124, 158 |
| BmiI | GGNNCC | 2 cut(s) | 71, 125 |
| BmrFI | CCNGG | 2 cut(s) | 224, 245 |
| BmsI | GCATC | 2 cut(s) | 19, 1153 |
| BpiI | GAAGAC | 4 cut(s) | 40, 153, 625, 713 |
| BpuMI | CCSGG | 1 cut(s) | 224 |
| BsaAI | YACGTR | 1 cut(s) | 659 |
| BsaI | GGTCTC | 1 cut(s) | 957 |
| BsaJI | CCNNGG | 4 cut(s) | 154, 207, 591, 1067 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 921 |
| Bse1I | ACTGG | 1 cut(s) | 309 |
| Bse3DI | GCAATG | 1 cut(s) | 819 |
| BseBI | CCWGG | 1 cut(s) | 245 |
| BseDI | CCNNGG | 4 cut(s) | 154, 207, 591, 1067 |
| BseGI | GGATG | 1 cut(s) | 493 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 921 |
| BseMI | GCAATG | 1 cut(s) | 819 |
| BseMII | CTCAG | 2 cut(s) | 308, 1125 |
| BseNI | ACTGG | 1 cut(s) | 309 |
| BseRI | GAGGAG | 1 cut(s) | 839 |
| BseXI | GCAGC | 3 cut(s) | 517, 553, 872 |
| BseYI | CCCAGC | 1 cut(s) | 1117 |
| BshFI | GGCC | 3 cut(s) | 160, 810, 1072 |
| BsiHKAI | GWGCWC | 1 cut(s) | 882 |
| BsiSI | CCGG | 2 cut(s) | 223, 825 |
| BslFI | GGGAC | 3 cut(s) | 83, 398, 1135 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 921 |
| BsmAI | GTCTC | 2 cut(s) | 957, 991 |
| BsmFI | GGGAC | 3 cut(s) | 83, 398, 1135 |
| BsnI | GGCC | 3 cut(s) | 160, 810, 1072 |
| Bso31I | GGTCTC | 1 cut(s) | 957 |
| Bsp1286I | GDGCHC | 1 cut(s) | 882 |
| Bsp143I | GATC | 3 cut(s) | 261, 675, 904 |
| Bsp19I | CCATGG | 1 cut(s) | 207 |
| BspACI | CCGC | 1 cut(s) | 528 |
| BspANI | GGCC | 3 cut(s) | 160, 810, 1072 |
| BspCNI | CTCAG | 2 cut(s) | 307, 1126 |
| BspHI | TCATGA | 2 cut(s) | 258, 372 |
| BspLI | GGNNCC | 2 cut(s) | 71, 125 |
| BspMAI | CTGCAG | 1 cut(s) | 766 |
| BspMI | ACCTGC | 1 cut(s) | 375 |
| BspPI | GGATC | 1 cut(s) | 899 |
| BspQI | GCTCTTC | 2 cut(s) | 775, 1107 |
| BspTI | CTTAAG | 1 cut(s) | 458 |
| BspTNI | GGTCTC | 1 cut(s) | 957 |
| BsrDI | GCAATG | 1 cut(s) | 819 |
| BsrI | ACTGG | 1 cut(s) | 309 |
| BssECI | CCNNGG | 4 cut(s) | 154, 207, 591, 1067 |
| BssMI | GATC | 3 cut(s) | 261, 675, 904 |
| BssT1I | CCWWGG | 3 cut(s) | 207, 591, 1067 |
| Bst2UI | CCWGG | 1 cut(s) | 245 |
| Bst4CI | ACNGT | 1 cut(s) | 331 |
| Bst6I | CTCTTC | 3 cut(s) | 775, 1107, 1131 |
| BstAFI | CTTAAG | 1 cut(s) | 458 |
| BstBAI | YACGTR | 1 cut(s) | 659 |
| BstC8I | GCNNGC | 3 cut(s) | 762, 766, 1084 |
| BstDEI | CTNAG | 2 cut(s) | 294, 1134 |
| BstDSI | CCRYGG | 1 cut(s) | 207 |
| BstF5I | GGATG | 1 cut(s) | 493 |
| BstHHI | GCGC | 1 cut(s) | 1082 |
| BstKTI | GATC | 3 cut(s) | 264, 678, 907 |
| BstMAI | GTCTC | 2 cut(s) | 957, 991 |
| BstMBI | GATC | 3 cut(s) | 261, 675, 904 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 798, 807, 830, 1040 |
| BstNI | CCWGG | 1 cut(s) | 245 |
| BstNSI | RCATGY | 2 cut(s) | 886, 984 |
| BstSCI | CCNGG | 2 cut(s) | 222, 243 |
| BstSFI | CTRYAG | 1 cut(s) | 762 |
| BstV1I | GCAGC | 3 cut(s) | 517, 553, 872 |
| BstV2I | GAAGAC | 4 cut(s) | 40, 153, 625, 713 |
| BsuRI | GGCC | 3 cut(s) | 160, 810, 1072 |
| BtgI | CCRYGG | 1 cut(s) | 207 |
| BtgZI | GCGATG | 1 cut(s) | 1130 |
| BtsCI | GGATG | 1 cut(s) | 493 |
| BtsI | GCAGTG | 2 cut(s) | 303, 1156 |
| BtsIMutI | CAGTG | 2 cut(s) | 303, 1156 |
| BveI | ACCTGC | 1 cut(s) | 375 |
| Cac8I | GCNNGC | 3 cut(s) | 762, 766, 1084 |
| CciI | TCATGA | 2 cut(s) | 258, 372 |
| CfoI | GCGC | 1 cut(s) | 1082 |
| Cfr13I | GGNCC | 4 cut(s) | 4, 70, 124, 158 |
| Csp6I | GTAC | 2 cut(s) | 318, 984 |
| CviAII | CATG | 9 cut(s) | 42, 208, 259, 373, 401, 553, 883, 981, 1090 |
| CviQI | GTAC | 2 cut(s) | 318, 984 |
| DdeI | CTNAG | 2 cut(s) | 294, 1134 |
| DpnI | GATC | 3 cut(s) | 263, 677, 906 |
| DpnII | GATC | 3 cut(s) | 261, 675, 904 |
| Eam1104I | CTCTTC | 3 cut(s) | 775, 1107, 1131 |
| EarI | CTCTTC | 3 cut(s) | 775, 1107, 1131 |
| Eco130I | CCWWGG | 3 cut(s) | 207, 591, 1067 |
| Eco31I | GGTCTC | 1 cut(s) | 957 |
| Eco47I | GGWCC | 3 cut(s) | 4, 70, 124 |
| Eco72I | CACGTG | 1 cut(s) | 659 |
| EcoO109I | RGGNCCY | 3 cut(s) | 70, 124, 158 |
| EcoRII | CCWGG | 1 cut(s) | 243 |
| EcoT14I | CCWWGG | 3 cut(s) | 207, 591, 1067 |
| ErhI | CCWWGG | 3 cut(s) | 207, 591, 1067 |
| FaeI | CATG | 9 cut(s) | 45, 211, 262, 376, 404, 556, 886, 984, 1093 |
| FaqI | GGGAC | 3 cut(s) | 83, 398, 1135 |
| FatI | CATG | 9 cut(s) | 41, 207, 258, 372, 400, 552, 882, 980, 1089 |
| FauNDI | CATATG | 1 cut(s) | 266 |
| FbaI | TGATCA | 1 cut(s) | 261 |
| Fnu4HI | GCNGC | 3 cut(s) | 531, 567, 861 |
| FokI | GGATG | 1 cut(s) | 500 |
| Fsp4HI | GCNGC | 3 cut(s) | 531, 567, 861 |
| FspBI | CTAG | 4 cut(s) | 249, 681, 737, 741 |
| GlaI | GCGC | 1 cut(s) | 1081 |
| GluI | GCNGC | 3 cut(s) | 531, 567, 861 |
| GsaI | CCCAGC | 1 cut(s) | 1121 |
| HaeIII | GGCC | 3 cut(s) | 160, 810, 1072 |
| HapII | CCGG | 2 cut(s) | 223, 825 |
| HhaI | GCGC | 1 cut(s) | 1082 |
| Hin1II | CATG | 9 cut(s) | 45, 211, 262, 376, 404, 556, 886, 984, 1093 |
| Hin6I | GCGC | 1 cut(s) | 1080 |
| HinP1I | GCGC | 1 cut(s) | 1080 |
| HincII | GTYRAC | 1 cut(s) | 796 |
| HindII | GTYRAC | 1 cut(s) | 796 |
| HindIII | AAGCTT | 1 cut(s) | 184 |
| HinfI | GANTC | 4 cut(s) | 292, 407, 1094, 1123 |
| HpaII | CCGG | 2 cut(s) | 223, 825 |
| HphI | GGTGA | 2 cut(s) | 161, 1038 |
| Hpy166II | GTNNAC | 2 cut(s) | 364, 796 |
| Hpy188I | TCNGA | 5 cut(s) | 138, 155, 297, 344, 616 |
| Hpy188III | TCNNGA | 8 cut(s) | 52, 259, 373, 446, 730, 908, 927, 1157 |
| Hpy8I | GTNNAC | 2 cut(s) | 364, 796 |
| HpyAV | CCTTC | 2 cut(s) | 208, 611 |
| HpyCH4III | ACNGT | 1 cut(s) | 331 |
| HpyCH4IV | ACGT | 1 cut(s) | 658 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 798, 807, 830, 1040 |
| HpyF3I | CTNAG | 2 cut(s) | 294, 1134 |
| HpySE526I | ACGT | 1 cut(s) | 658 |
| Hsp92II | CATG | 9 cut(s) | 45, 211, 262, 376, 404, 556, 886, 984, 1093 |
| HspAI | GCGC | 1 cut(s) | 1080 |
| Ksp22I | TGATCA | 1 cut(s) | 261 |
| Kzo9I | GATC | 3 cut(s) | 261, 675, 904 |
| LguI | GCTCTTC | 2 cut(s) | 775, 1107 |
| LmnI | GCTCC | 2 cut(s) | 226, 584 |
| Lsp1109I | GCAGC | 3 cut(s) | 517, 553, 872 |
| LweI | GCATC | 2 cut(s) | 19, 1153 |
| MaeI | CTAG | 4 cut(s) | 249, 681, 737, 741 |
| MaeII | ACGT | 1 cut(s) | 658 |
| MaeIII | GTNAC | 2 cut(s) | 79, 299 |
| MalI | GATC | 3 cut(s) | 263, 677, 906 |
| MboI | GATC | 3 cut(s) | 261, 675, 904 |
| MboII | GAAGA | 8 cut(s) | 40, 158, 488, 625, 718, 762, 1118, 1124 |
| MhlI | GDGCHC | 1 cut(s) | 882 |
| MluCI | AATT | 3 cut(s) | 174, 434, 930 |
| MlyI | GAGTC | 2 cut(s) | 286, 1117 |
| MmeI | TCCRAC | 2 cut(s) | 367, 465 |
| MnlI | CCTC | 8 cut(s) | 149, 171, 442, 860, 925, 1054, 1162, 1203 |
| MroXI | GAANNNNTTC | 2 cut(s) | 495, 725 |
| MseI | TTAA | 3 cut(s) | 326, 459, 1190 |
| MslI | CAYNNNNRTG | 3 cut(s) | 27, 1014, 1149 |
| MspA1I | CMGCKG | 1 cut(s) | 530 |
| MspCI | CTTAAG | 1 cut(s) | 458 |
| MspI | CCGG | 2 cut(s) | 223, 825 |
| MspR9I | CCNGG | 2 cut(s) | 224, 245 |
| MvaI | CCWGG | 1 cut(s) | 245 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 798, 807, 830, 1040 |
| NciI | CCSGG | 1 cut(s) | 224 |
| NcoI | CCATGG | 1 cut(s) | 207 |
| NdeI | CATATG | 1 cut(s) | 266 |
| NdeII | GATC | 3 cut(s) | 261, 675, 904 |
| NlaIII | CATG | 9 cut(s) | 45, 211, 262, 376, 404, 556, 886, 984, 1093 |
| NlaIV | GGNNCC | 2 cut(s) | 71, 125 |
| NspI | RCATGY | 2 cut(s) | 886, 984 |
| PagI | TCATGA | 2 cut(s) | 258, 372 |
| PciI | ACATGT | 1 cut(s) | 980 |
| PciSI | GCTCTTC | 2 cut(s) | 775, 1107 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1153 |
| PdmI | GAANNNNTTC | 2 cut(s) | 495, 725 |
| PfeI | GAWTC | 2 cut(s) | 407, 1094 |
| PkrI | GCNGC | 3 cut(s) | 532, 568, 862 |
| PleI | GAGTC | 2 cut(s) | 286, 1117 |
| PmaCI | CACGTG | 1 cut(s) | 659 |
| PmlI | CACGTG | 1 cut(s) | 659 |
| PpsI | GAGTC | 2 cut(s) | 286, 1117 |
| Ppu21I | YACGTR | 1 cut(s) | 659 |
| PpuMI | RGGWCCY | 2 cut(s) | 70, 124 |
| PscI | ACATGT | 1 cut(s) | 980 |
| Psp5II | RGGWCCY | 2 cut(s) | 70, 124 |
| Psp6I | CCWGG | 1 cut(s) | 243 |
| PspCI | CACGTG | 1 cut(s) | 659 |
| PspFI | CCCAGC | 1 cut(s) | 1117 |
| PspGI | CCWGG | 1 cut(s) | 243 |
| PspN4I | GGNNCC | 2 cut(s) | 71, 125 |
| PspPI | GGNCC | 4 cut(s) | 4, 70, 124, 158 |
| PspPPI | RGGWCCY | 2 cut(s) | 70, 124 |
| PstI | CTGCAG | 1 cut(s) | 766 |
| RsaI | GTAC | 2 cut(s) | 319, 985 |
| RsaNI | GTAC | 2 cut(s) | 318, 984 |
| RseI | CAYNNNNRTG | 3 cut(s) | 27, 1014, 1149 |
| SapI | GCTCTTC | 2 cut(s) | 775, 1107 |
| SaqAI | TTAA | 3 cut(s) | 326, 459, 1190 |
| SatI | GCNGC | 3 cut(s) | 531, 567, 861 |
| Sau3AI | GATC | 3 cut(s) | 261, 675, 904 |
| Sau96I | GGNCC | 4 cut(s) | 4, 70, 124, 158 |
| SbfI | CCTGCAGG | 1 cut(s) | 766 |
| SchI | GAGTC | 2 cut(s) | 286, 1117 |
| ScrFI | CCNGG | 2 cut(s) | 224, 245 |
| SdaI | CCTGCAGG | 1 cut(s) | 766 |
| SduI | GDGCHC | 1 cut(s) | 882 |
| SfaNI | GCATC | 2 cut(s) | 19, 1153 |
| SfcI | CTRYAG | 1 cut(s) | 762 |
| SinI | GGWCC | 3 cut(s) | 4, 70, 124 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 27, 1014, 1149 |
| SmlI | CTYRAG | 1 cut(s) | 458 |
| SmoI | CTYRAG | 1 cut(s) | 458 |
| SpeI | ACTAGT | 1 cut(s) | 680 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 766 |
| Sse9I | AATT | 3 cut(s) | 174, 434, 930 |
| SsiI | CCGC | 1 cut(s) | 528 |
| SspMI | CTAG | 4 cut(s) | 249, 681, 737, 741 |
| StyD4I | CCNGG | 2 cut(s) | 222, 243 |
| StyI | CCWWGG | 3 cut(s) | 207, 591, 1067 |
| TaaI | ACNGT | 1 cut(s) | 331 |
| TaiI | ACGT | 1 cut(s) | 661 |
| TaqI | TCGA | 2 cut(s) | 729, 1156 |
| TasI | AATT | 3 cut(s) | 174, 434, 930 |
| TatI | WGTACW | 1 cut(s) | 983 |
| TfiI | GAWTC | 2 cut(s) | 407, 1094 |
| Tru1I | TTAA | 3 cut(s) | 326, 459, 1190 |
| Tru9I | TTAA | 3 cut(s) | 326, 459, 1190 |
| TscAI | CASTG | 2 cut(s) | 310, 1156 |
| TseI | GCWGC | 3 cut(s) | 530, 566, 860 |
| TspRI | CASTG | 2 cut(s) | 310, 1156 |
| Vha464I | CTTAAG | 1 cut(s) | 458 |
| VpaK11BI | GGWCC | 3 cut(s) | 4, 70, 124 |
| XapI | RAATTY | 1 cut(s) | 930 |
| XceI | RCATGY | 2 cut(s) | 886, 984 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 481, 589 |
| XmnI | GAANNNNTTC | 2 cut(s) | 495, 725 |
| XspI | CTAG | 4 cut(s) | 249, 681, 737, 741 |