RLG00000033944

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
34543910 .. 34548770
4861 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033944

Sequence Viewer

Length: 2568 bp
ATGGAGAATCAGAAGACAAGTATCCTTCTTCTTTTCTCATGGATTTTCATGGTCGCCACCATGGTAGCTGCAAGCACAACGATAATCCCAGTGAACGTGGGAGTTGTTGTAGACCTTGATGAACCGAGAGGGAAAATGTACCTGAGTTGCATCGAAATGGCGCTTTCGGATTTCTATGCTATCCATGCTGACTACAAGACTAGGCTCGTTTTGAACACCAGGAACTCCAATGGAGATGTGGTTGGAGCAGCTGCCGCAGCTTTAGATCTGATAAAGAATGTAGAAGTGAAAGCCATCCTAGGACCGATGTCGTCCATGCAGGCAAGTTTCGTTGTTAATCTTGGAGAGAAAGCTCATGTACCCATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACCAAGGAGCTCCTATTTTTTCCGATTTGCACAAAATGACTTGAACCAAGTGAAAGCTATAAGTGGTATTGTTCAGAACTTTGGATGGAGACGAGTTGTGCCCATCTACGTAGACAACATGTATGGGGAAGGAGTCATACCTTTTCTAATTGATGCCTTGCAAGACGTTGATGCTCATATCCCCTACAGAAGTCTAATTCACGAACTAGCCACGGATGATCAGATTGAAAAAGAGCTTTACAAGTTGATGACGATGCAGACTCGAGTCTTCATTGTGCATATGATGCCTAATCTTTCCTCTCGGTTATTTGCCAAGGCAAAAGAGATGGGAATGATGAGTGAGGGTTTTGTTTGGATCACAACTAATAGTATTGGAAATAATTTAAGGTCTATGGCTTCAGTCCTTGATTCAATGCAAGGCCTATTAGGTGTAGAAACTTACATTCCAAGGACATTAAAGCTTAGACAATTCATATCAAGGTGGAAAAAGCAATTCCAACAAGACAATCCAAAAATCATTGATGTTGAATTGGATGCTTTTGGATTGCGGGCATATGATGCTACTTTTGCAGTAGCCATGGCAGTTGAGAAAGTTGCCAATGCAGGTTTTAAATTCCAAAAGAGGAATGCTTCTTCCTTCAACTCTCATTATGGCTCAAAACTTTCTCATGCATTATCCATCATTAATTTCAAAGGTATGGCTGGAGACTTCAATCTTGTTGATAGGCAACTTCAGGTATCAACTTTTAAGATTGTTAATGTGAATGGTTATGGACCAAGAACAGTTGGATACTGGACACCAAAAAATGGAAGGGTAGTAAAGCGGTTGAAATCGACAGGGAGTAGTACAAAATCAACTTCCAAGTGCGATCTTAGACCTATTATATGGCCTGGAGAGTCATTATCAGTTCCTAAAGGATGGGAGATCCCGATAAATATTGGTACCAAGTTAAGAATAGGAGTTCCTATGAGGGAAGGTTTTCAAGAGTTTGTTAAAGTAACTAATACAAGCACTAATACAGTTGACGTCACTGGATTCAGTATTGACGTGTTTAATGCCGTATTGGAGATCCTACCATATGCACTTCCTTATGATTTTGTTCCCTTTGCAATTGCTAATGGAAGCACATACAATGATTTGGTGTATCAAGTACATGATGGGAAAGTGGTTAGCAACTTGGCAAGATTTGTGATGATTATATGGATATTCGTTGTACTAATAGTGACACAAAGCTATACAGCTAGTCTAGCATCACTATTGACAGTCCAACAACTCCAACCAACTGTTACCGATATAGATGATCTTTTGAGGAATAGAGATAATGTGGGCTACATGACGAGTTCTTTTGTTTATGATCTCTTGAGACAAAAAGGTTTTCATGCGTCCAGGCTTAAGGATTATGGAGCTATGGAAGAAATAGATGAAGCTCTTTCAAAGGGGAGTGCAAATGGCGGTATTGCTGCTATTGTTCATGAAACCCCCTATATGAAGCTTTTTGTTGCAAAATATTGTTCCAAGTATACCATGATTGGACCTATATTTAAAACTGATGGCTTTGGCTTCATATTTCCGAAAGGTTCTCCTCTTATACCCGATGTTTCACAAGCAATCCTTAATTTGACAGAAGGAGAGAAGATAATGAACATTGAAGACGAATGGATGAAGAAAGAAAACAATTGTAAAGATCCAAGTACAGAGAAATTTTACAGCAATAGTCTTAGCCTTGAGAGCTTTTGGGGCCTCTTCCTCATTGCTGGGGTAGCTTCAATATTCGCTCTCCTCATATTTGCAACTTCCTTCCTTCACAAGCATAAGCAAGTTTTGATGTCCTCTGATTCAAGAGCTTCCAAGTGGAAAAGGATTAGAACCATGTTCAAGATTTTCAATGAAAAAGAACTTAGCTCTCATACTTTTAAAAGCAGTAGGCATGAAGCTAGGATCGCTGGTGCTCCGAATCATGAAGTGAATGCCTCACCAAATAACAACTGGCCGGAAAGTCCTTTTAGCTATACCAACCAGACGGATGCAACTTCTGTATTCTACGGAGAGCAAGAAACACCATCTCACGGTCAAGCATCTCCGGAAATCGTTCCAACTTTTGAGCTTGCTGCTTTCACTAATCAAGAAATGCATGTAACTCCGGAAACAGCTCAAGAAAGAGTTTGA

Protein Analysis

856

Amino Acids

95.53

Weight (kDa)

8.29

Isoelectric Point (pI)

36.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 30 - 332 2.3e-20 Periplasmic binding protein
ANF_receptor PF01094 50 - 390 2.6e-77 Receptor family ligand binding region
Lig_chan PF00060 514 - 722 3.6e-24 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1431
Acc36I ACCTGC 1 cut(s) 995
Acc65I GGTACC 1 cut(s) 1343
AccB1I GGYRCC 1 cut(s) 1343
AccB7I CCANNNNNTGG 1 cut(s) 1208
AccI GTMKAC 3 cut(s) 111, 513, 1922
AccIII TCCGGA 2 cut(s) 2482, 2542
AciI CCGC 4 cut(s) 255, 949, 1225, 1854
AclWI GGATC 5 cut(s) 764, 1321, 1465, 2081, 2348
AcoI YGGCCR 1 cut(s) 2390
AcsI RAATTY 2 cut(s) 1013, 2102
AcuI CTGAAG 2 cut(s) 783, 1118
AcyI GRCGYC 1 cut(s) 1428
AfaI GTAC 7 cut(s) 140, 360, 1249, 1345, 1554, 1617, 2095
AfiI CCNNNNNNNGG 2 cut(s) 1208, 2468
AflII CTTAAG 1 cut(s) 1793
AflIII ACRYGT 2 cut(s) 519, 1449
AjiI CACGTC 1 cut(s) 1450
AjnI CCWGG 3 cut(s) 218, 1291, 1787
Alw21I GWGCWC 2 cut(s) 413, 2353
Alw26I GTCTC 3 cut(s) 484, 1101, 1759
AlwI GGATC 5 cut(s) 764, 1321, 1465, 2081, 2348
Ama87I CYCGRG 1 cut(s) 663
Aor13HI TCCGGA 2 cut(s) 2482, 2542
AoxI GGCC 4 cut(s) 820, 1289, 2140, 2390
ApeKI GCWGC 6 cut(s) 68, 248, 251, 257, 1862, 2510
ApoI RAATTY 2 cut(s) 1013, 2102
AseI ATTAAT 1 cut(s) 1086
Asp700I GAANNNNTTC 2 cut(s) 1380, 2490
Asp718I GGTACC 1 cut(s) 1343
AspA2I CCTAGG 1 cut(s) 298
AspLEI GCGC 1 cut(s) 163
AspS9I GGNCC 4 cut(s) 302, 1175, 1934, 2140
AsuHPI GGTGA 2 cut(s) 393, 2367
AvaI CYCGRG 1 cut(s) 663
AvaII GGWCC 3 cut(s) 302, 1175, 1934
AvrII CCTAGG 1 cut(s) 298
BaeGI GKGCMC 1 cut(s) 504
BanI GGYRCC 1 cut(s) 1343
BanII GRGCYC 1 cut(s) 413
BarI GAAGNNNNNNTAC 2 cut(s) 522, 554
BbsI GAAGAC 3 cut(s) 20, 661, 2058
Bbv12I GWGCWC 2 cut(s) 413, 2353
BbvI GCAGC 6 cut(s) 55, 238, 260, 269, 1849, 2497
BceAI ACGGC 1 cut(s) 1445
BciT130I CCWGG 3 cut(s) 220, 1293, 1789
BciVI GTATCC 2 cut(s) 32, 1184
BclI TGATCA 1 cut(s) 619
BcoDI GTCTC 3 cut(s) 484, 1101, 1759
BfaI CTAG 6 cut(s) 201, 299, 608, 1644, 1649, 2337
BfmI CTRYAG 1 cut(s) 586
BfoI RGCGCY 1 cut(s) 164
BfrI CTTAAG 1 cut(s) 1793
BfuAI ACCTGC 1 cut(s) 995
BfuI GTATCC 2 cut(s) 32, 1184
BglII AGATCT 1 cut(s) 265
BisI GCNGC 7 cut(s) 69, 249, 252, 255, 258, 1863, 2511
BlnI CCTAGG 1 cut(s) 298
BlsI GCNGC 7 cut(s) 70, 250, 253, 256, 259, 1864, 2512
Bme1390I CCNGG 3 cut(s) 220, 1293, 1789
Bme18I GGWCC 3 cut(s) 302, 1175, 1934
BmeT110I CYCGRG 1 cut(s) 663
BmgBI CACGTC 1 cut(s) 1450
BmgT120I GGNCC 4 cut(s) 302, 1175, 1934, 2140
BmiI GGNNCC 2 cut(s) 1345, 2141
BmrFI CCNGG 3 cut(s) 220, 1293, 1789
BmrI ACTGGG 1 cut(s) 83
BmuI ACTGGG 1 cut(s) 83
BoxI GACNNNNGTC 2 cut(s) 307, 665
BpiI GAAGAC 3 cut(s) 20, 661, 2058
BpmI CTGGAG 2 cut(s) 1125, 1314
BpuEI CTTGAG 3 cut(s) 1783, 2147, 2538
BsaAI YACGTR 1 cut(s) 511
BsaHI GRCGYC 1 cut(s) 1428
BsaJI CCNNGG 7 cut(s) 60, 298, 404, 612, 714, 848, 978
BsaWI WCCGGW 2 cut(s) 2482, 2542
BsaXI ACNNNNNCTCC 4 cut(s) 93, 123, 225, 255
Bsc4I CCNNNNNNNGG 2 cut(s) 1208, 2468
Bse1I ACTGG 4 cut(s) 89, 1199, 1438, 2393
Bse3DI GCAATG 1 cut(s) 2151
BseAI TCCGGA 2 cut(s) 2482, 2542
BseBI CCWGG 3 cut(s) 220, 1293, 1789
BseDI CCNNGG 7 cut(s) 60, 298, 404, 612, 714, 848, 978
BseGI GGATG 7 cut(s) 294, 491, 622, 940, 1325, 2067, 2431
BseLI CCNNNNNNNGG 2 cut(s) 1208, 2468
BseMI GCAATG 1 cut(s) 2151
BseMII CTCAG 1 cut(s) 134
BseNI ACTGG 4 cut(s) 89, 1199, 1438, 2393
BseRI GAGGAG 2 cut(s) 1974, 2171
BseSI GKGCMC 1 cut(s) 504
BseXI GCAGC 6 cut(s) 55, 238, 260, 269, 1849, 2497
BseYI CCCAGC 1 cut(s) 2156
BshFI GGCC 4 cut(s) 822, 1291, 2142, 2392
BshNI GGYRCC 1 cut(s) 1343
BsiHKAI GWGCWC 2 cut(s) 413, 2353
BsiHKCI CYCGRG 1 cut(s) 663
BsiSI CCGG 3 cut(s) 2393, 2483, 2543
BslI CCNNNNNNNGG 2 cut(s) 1208, 2468
BsmAI GTCTC 3 cut(s) 484, 1101, 1759
BsmBI CGTCTC 1 cut(s) 484
BsmI GAATGC 2 cut(s) 1033, 2374
BsnI GGCC 4 cut(s) 822, 1291, 2142, 2392
BsoBI CYCGRG 1 cut(s) 663
Bsp1286I GDGCHC 3 cut(s) 413, 504, 2353
Bsp13I TCCGGA 2 cut(s) 2482, 2542
Bsp19I CCATGG 2 cut(s) 60, 978
BspACI CCGC 4 cut(s) 255, 949, 1225, 1854
BspANI GGCC 4 cut(s) 822, 1291, 2142, 2392
BspCNI CTCAG 1 cut(s) 135
BspEI TCCGGA 2 cut(s) 2482, 2542
BspHI TCATGA 2 cut(s) 1873, 2359
BspLI GGNNCC 2 cut(s) 1345, 2141
BspMI ACCTGC 1 cut(s) 995
BspPI GGATC 5 cut(s) 764, 1321, 1465, 2081, 2348
BspT107I GGYRCC 1 cut(s) 1343
BspTI CTTAAG 1 cut(s) 1793
BsrDI GCAATG 1 cut(s) 2151
BsrI ACTGG 4 cut(s) 89, 1199, 1438, 2393
BssECI CCNNGG 7 cut(s) 60, 298, 404, 612, 714, 848, 978
BssNAI GTATAC 1 cut(s) 1923
BssNI GRCGYC 1 cut(s) 1428
BssT1I CCWWGG 6 cut(s) 60, 298, 404, 714, 848, 978
Bst1107I GTATAC 1 cut(s) 1923
Bst2UI CCWGG 3 cut(s) 220, 1293, 1789
Bst4CI ACNGT 5 cut(s) 1186, 1423, 1666, 1687, 2471
Bst6I CTCTTC 1 cut(s) 2150
BstACI GRCGYC 1 cut(s) 1428
BstAFI CTTAAG 1 cut(s) 1793
BstAPI GCANNNNNTGC 2 cut(s) 685, 959
BstBAI YACGTR 1 cut(s) 511
BstC8I GCNNGC 4 cut(s) 73, 321, 951, 2508
BstDEI CTNAG 5 cut(s) 143, 863, 1274, 2120, 2300
BstDSI CCRYGG 3 cut(s) 60, 612, 978
BstF5I GGATG 7 cut(s) 294, 491, 622, 940, 1325, 2067, 2431
BstH2I RGCGCY 1 cut(s) 164
BstHHI GCGC 1 cut(s) 163
BstMAI GTCTC 3 cut(s) 484, 1101, 1759
BstNI CCWGG 3 cut(s) 220, 1293, 1789
BstNSI RCATGY 2 cut(s) 523, 2537
BstPAI GACNNNNGTC 2 cut(s) 307, 665
BstSCI CCNGG 3 cut(s) 218, 1291, 1787
BstSFI CTRYAG 1 cut(s) 586
BstSLI GKGCMC 1 cut(s) 504
BstSNI TACGTA 1 cut(s) 511
BstV1I GCAGC 6 cut(s) 55, 238, 260, 269, 1849, 2497
BstV2I GAAGAC 3 cut(s) 20, 661, 2058
BstX2I RGATCY 4 cut(s) 265, 1326, 1470, 2086
BstYI RGATCY 4 cut(s) 265, 1326, 1470, 2086
BstZ17I GTATAC 1 cut(s) 1923
BsuI GTATCC 2 cut(s) 32, 1184
BsuRI GGCC 4 cut(s) 822, 1291, 2142, 2392
BtgI CCRYGG 3 cut(s) 60, 612, 978
BtrI CACGTC 1 cut(s) 1450
BtsCI GGATG 7 cut(s) 294, 491, 622, 940, 1325, 2067, 2431
BtsIMutI CAGTG 2 cut(s) 96, 1431
BveI ACCTGC 1 cut(s) 995
Cac8I GCNNGC 4 cut(s) 73, 321, 951, 2508
CciI TCATGA 2 cut(s) 1873, 2359
CfoI GCGC 1 cut(s) 163
Cfr13I GGNCC 4 cut(s) 302, 1175, 1934, 2140
CseI GACGC 1 cut(s) 1773
Csp6I GTAC 7 cut(s) 139, 359, 1248, 1344, 1553, 1616, 2094
CviQI GTAC 7 cut(s) 139, 359, 1248, 1344, 1553, 1616, 2094
DdeI CTNAG 5 cut(s) 143, 863, 1274, 2120, 2300
DraI TTTAAA 3 cut(s) 1012, 1945, 2317
EaeI YGGCCR 1 cut(s) 2390
Eam1104I CTCTTC 1 cut(s) 2150
EarI CTCTTC 1 cut(s) 2150
Ecl136II GAGCTC 1 cut(s) 411
Eco105I TACGTA 1 cut(s) 511
Eco130I CCWWGG 6 cut(s) 60, 298, 404, 714, 848, 978
Eco147I AGGCCT 1 cut(s) 822
Eco24I GRGCYC 1 cut(s) 413
Eco47I GGWCC 3 cut(s) 302, 1175, 1934
Eco53kI GAGCTC 1 cut(s) 411
Eco57I CTGAAG 2 cut(s) 783, 1118
Eco88I CYCGRG 1 cut(s) 663
EcoICRI GAGCTC 1 cut(s) 411
EcoO109I RGGNCCY 1 cut(s) 2140
EcoRII CCWGG 3 cut(s) 218, 1291, 1787
EcoT14I CCWWGG 6 cut(s) 60, 298, 404, 714, 848, 978
EcoT22I ATGCAT 2 cut(s) 1075, 2535
EcoT38I GRGCYC 1 cut(s) 413
ErhI CCWWGG 6 cut(s) 60, 298, 404, 714, 848, 978
Esp3I CGTCTC 1 cut(s) 484
FalI AAGNNNNNCTT 2 cut(s) 1998, 2030
FauI CCCGC 1 cut(s) 942
FauNDI CATATG 3 cut(s) 681, 955, 1480
FbaI TGATCA 1 cut(s) 619
FblI GTMKAC 3 cut(s) 111, 513, 1922
Fnu4HI GCNGC 7 cut(s) 69, 249, 252, 255, 258, 1863, 2511
FokI GGATG 7 cut(s) 281, 498, 629, 947, 1332, 2074, 2438
FriOI GRGCYC 1 cut(s) 413
Fsp4HI GCNGC 7 cut(s) 69, 249, 252, 255, 258, 1863, 2511
FspBI CTAG 6 cut(s) 201, 299, 608, 1644, 1649, 2337
GlaI GCGC 1 cut(s) 162
GluI GCNGC 7 cut(s) 69, 249, 252, 255, 258, 1863, 2511
GsaI CCCAGC 1 cut(s) 2160
GsuI CTGGAG 2 cut(s) 1125, 1314
HaeII RGCGCY 1 cut(s) 164
HaeIII GGCC 4 cut(s) 822, 1291, 2142, 2392
HapII CCGG 3 cut(s) 2393, 2483, 2543
HgaI GACGC 1 cut(s) 1773
HhaI GCGC 1 cut(s) 163
Hin1I GRCGYC 1 cut(s) 1428
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HincII GTYRAC 1 cut(s) 1426
HindII GTYRAC 1 cut(s) 1426
HindIII AAGCTT 2 cut(s) 860, 1892
HinfI GANTC 9 cut(s) 7, 534, 661, 666, 809, 1298, 1437, 2237, 2356
HpaII CCGG 3 cut(s) 2393, 2483, 2543
HphI GGTGA 2 cut(s) 393, 2367
Hpy166II GTNNAC 5 cut(s) 94, 112, 514, 1426, 1923
Hpy188I TCNGA 9 cut(s) 12, 169, 270, 425, 477, 624, 1974, 2236, 2355
Hpy8I GTNNAC 5 cut(s) 94, 112, 514, 1426, 1923
HpyAV CCTTC 9 cut(s) 35, 399, 524, 1048, 1206, 1370, 2021, 2209, 2213
HpyCH4III ACNGT 5 cut(s) 1186, 1423, 1666, 1687, 2471
HpyCH4IV ACGT 5 cut(s) 96, 510, 567, 1428, 1449
HpyF3I CTNAG 5 cut(s) 143, 863, 1274, 2120, 2300
HpySE526I ACGT 5 cut(s) 96, 510, 567, 1428, 1449
Hsp92I GRCGYC 1 cut(s) 1428
HspAI GCGC 1 cut(s) 161
Kpn2I TCCGGA 2 cut(s) 2482, 2542
KpnI GGTACC 1 cut(s) 1347
Ksp22I TGATCA 1 cut(s) 619
LmnI GCTCC 5 cut(s) 245, 408, 416, 1805, 2356
Lsp1109I GCAGC 6 cut(s) 55, 238, 260, 269, 1849, 2497
MaeI CTAG 6 cut(s) 201, 299, 608, 1644, 1649, 2337
MaeII ACGT 5 cut(s) 96, 510, 567, 1428, 1449
MaeIII GTNAC 5 cut(s) 1399, 1429, 1624, 1687, 2536
MboII GAAGA 9 cut(s) 20, 25, 661, 1026, 1826, 2047, 2063, 2077, 2137
MfeI CAATTG 2 cut(s) 1512, 2077
MflI RGATCY 4 cut(s) 265, 1326, 1470, 2086
MhlI GDGCHC 3 cut(s) 413, 504, 2353
MlyI GAGTC 4 cut(s) 543, 655, 675, 1307
MmeI TCCRAC 6 cut(s) 223, 922, 1168, 1693, 1702, 2519
Mph1103I ATGCAT 2 cut(s) 1075, 2535
MroI TCCGGA 2 cut(s) 2482, 2542
MroXI GAANNNNTTC 2 cut(s) 1380, 2490
MslI CAYNNNNRTG 1 cut(s) 155
MspA1I CMGCKG 1 cut(s) 251
MspCI CTTAAG 1 cut(s) 1793
MspI CCGG 3 cut(s) 2393, 2483, 2543
MspR9I CCNGG 3 cut(s) 220, 1293, 1789
MunI CAATTG 2 cut(s) 1512, 2077
Mva1269I GAATGC 2 cut(s) 1033, 2374
MvaI CCWGG 3 cut(s) 220, 1293, 1789
NcoI CCATGG 2 cut(s) 60, 978
NdeI CATATG 3 cut(s) 681, 955, 1480
NlaIV GGNNCC 2 cut(s) 1345, 2141
NmuCI GTSAC 2 cut(s) 1429, 1624
NsiI ATGCAT 2 cut(s) 1075, 2535
NspI RCATGY 2 cut(s) 523, 2537
PaeR7I CTCGAG 1 cut(s) 663
PagI TCATGA 2 cut(s) 1873, 2359
PceI AGGCCT 1 cut(s) 822
PciI ACATGT 1 cut(s) 519
PctI GAATGC 2 cut(s) 1033, 2374
PdmI GAANNNNTTC 2 cut(s) 1380, 2490
PfeI GAWTC 5 cut(s) 7, 809, 1437, 2237, 2356
PflMI CCANNNNNTGG 1 cut(s) 1208
PkrI GCNGC 7 cut(s) 70, 250, 253, 256, 259, 1864, 2512
PleI GAGTC 4 cut(s) 542, 655, 674, 1306
PpsI GAGTC 4 cut(s) 542, 655, 674, 1306
Ppu21I YACGTR 1 cut(s) 511
PscI ACATGT 1 cut(s) 519
PshAI GACNNNNGTC 2 cut(s) 307, 665
PshBI ATTAAT 1 cut(s) 1086
Psp124BI GAGCTC 1 cut(s) 413
Psp6I CCWGG 3 cut(s) 218, 1291, 1787
PspFI CCCAGC 1 cut(s) 2156
PspGI CCWGG 3 cut(s) 218, 1291, 1787
PspN4I GGNNCC 2 cut(s) 1345, 2141
PspPI GGNCC 4 cut(s) 302, 1175, 1934, 2140
PspXI VCTCGAGB 1 cut(s) 663
PsuI RGATCY 4 cut(s) 265, 1326, 1470, 2086
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 7 cut(s) 140, 360, 1249, 1345, 1554, 1617, 2095
RsaNI GTAC 7 cut(s) 139, 359, 1248, 1344, 1553, 1616, 2094
RseI CAYNNNNRTG 1 cut(s) 155
SacI GAGCTC 1 cut(s) 413
SatI GCNGC 7 cut(s) 69, 249, 252, 255, 258, 1863, 2511
Sau96I GGNCC 4 cut(s) 302, 1175, 1934, 2140
SchI GAGTC 4 cut(s) 543, 655, 675, 1307
ScrFI CCNGG 3 cut(s) 220, 1293, 1789
SduI GDGCHC 3 cut(s) 413, 504, 2353
SfcI CTRYAG 1 cut(s) 586
Sfr274I CTCGAG 1 cut(s) 663
SinI GGWCC 3 cut(s) 302, 1175, 1934
SlaI CTCGAG 1 cut(s) 663
SmiMI CAYNNNNRTG 1 cut(s) 155
SmlI CTYRAG 5 cut(s) 663, 1762, 1793, 2126, 2553
SmoI CTYRAG 5 cut(s) 663, 1762, 1793, 2126, 2553
SnaBI TACGTA 1 cut(s) 511
SseBI AGGCCT 1 cut(s) 822
SsiI CCGC 4 cut(s) 255, 949, 1225, 1854
SspI AATATT 3 cut(s) 1339, 1910, 2172
SspMI CTAG 6 cut(s) 201, 299, 608, 1644, 1649, 2337
SstI GAGCTC 1 cut(s) 413
StuI AGGCCT 1 cut(s) 822
StyD4I CCNGG 3 cut(s) 218, 1291, 1787
StyI CCWWGG 6 cut(s) 60, 298, 404, 714, 848, 978
TaaI ACNGT 5 cut(s) 1186, 1423, 1666, 1687, 2471
TaiI ACGT 5 cut(s) 99, 513, 570, 1431, 1452
TaqI TCGA 3 cut(s) 153, 664, 1235
TaqII GACCGA 1 cut(s) 319
TatI WGTACW 4 cut(s) 1247, 1552, 1615, 2093
TauI GCSGC 1 cut(s) 257
TfiI GAWTC 5 cut(s) 7, 809, 1437, 2237, 2356
TscAI CASTG 2 cut(s) 96, 1438
TseFI GTSAC 2 cut(s) 1429, 1624
TseI GCWGC 6 cut(s) 68, 248, 251, 257, 1862, 2510
Tsp45I GTSAC 2 cut(s) 1429, 1624
TspGWI ACGGA 3 cut(s) 629, 2438, 2460
TspRI CASTG 2 cut(s) 96, 1438
Van91I CCANNNNNTGG 1 cut(s) 1208
Vha464I CTTAAG 1 cut(s) 1793
VpaK11BI GGWCC 3 cut(s) 302, 1175, 1934
VspI ATTAAT 1 cut(s) 1086
XapI RAATTY 2 cut(s) 1013, 2102
XceI RCATGY 2 cut(s) 523, 2537
XcmI CCANNNNNNNNNTGG 2 cut(s) 235, 2385
XhoI CTCGAG 1 cut(s) 663
XmaJI CCTAGG 1 cut(s) 298
XmiI GTMKAC 3 cut(s) 111, 513, 1922
XmnI GAANNNNTTC 2 cut(s) 1380, 2490
XspI CTAG 6 cut(s) 201, 299, 608, 1644, 1649, 2337
ZraI GACGTC 1 cut(s) 1429
Zsp2I ATGCAT 2 cut(s) 1075, 2535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.