Rroxscaffold_1G00041270

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
59036520 .. 59039517
2998 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00041270.1

Sequence Viewer

Length: 2121 bp
ATGACATCAATGCAAGCAACTTTTGTTGTTAAACTTGGAGAAAAAGCTCATGTGCCAATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCAGAGCTCCTATTTTTTCCAATTTGCACAAAATGACTCAACCCAAGTGAAAGCCATAAGTGGTATTGTTCAAAACTTTGGATGGAGGCGAGTTGTCCCCATTTACGTAGACAATATGTACGGGGAAGGAATCATGCCTTTTCTAATTGATGCCTTGCTCGAGGTTGATGCTCATGTCCCATATCGAAGTGTACTTTCACAATCAGCCACCGATGATCAAATTAAGATAGAACTTTACAAGTTAATGACAATGCAGACTAGAGTCTTCATAGTGCATATGATGCCTAAACTTGCATCCCAGTTATTTGCCAAGGCGAAAGAGATTGGAATGATGAACAAGGGTTTTGTATGGATCACGACCAATGGGATTGGAGATCGTTTAAAGGCAATGGGATCTGTTATGAATTCGATGCAAGGAGTATTAAGTGTTGAAACTGCTGTTTTAGACACATTGAAGCTTAGAGAATTCAAAACAAGGTGGAAAAGACAATTCCAACAAGATTATCCAGAAATCATTGATGTTGAGCTGGATTCCTTTGGATATCAGGCTTATGATGCAGCTTTTGCAATAGCCATGGCAGTTGAAAAAGTTGGGAATGCAAGCTTTGGATTTCAAAAGGGAAATGCTTCATCTTTCAAATCTACAGATCTTGGAACTCTAAAGGTCTCTCAGTATGGTTCAAACCTTTCTAATGCCTTATCTCTTACCAGTTTCAGAGGCATAGTTGGTGATTTTAGTCTTGTTGATAGGCAACTTCAACTGTCAACTTTTATGATTGTTAATGTGAATGGTAATGGAGTAAGAGCAGTTGGTTATTGGACACCAGAAAATGGAAGGTTAATGAAGCAGTTGAATTCAACAAATAGTTGTAATGTTTCAGGTTTCAAGTGTGATGGTCTTGGACCCATTATATGGCCGGGAGAGTCATCCTCCGTTCCCAAAGGATGGGAGATCCCAGAAAATGGTACGAGGTTAAGATTTGGAGTTCCAGTGAAGGATGGTTTTACAGAGTTTGTTAAAGTAACAACAGATTTTGGAACTAATACCACTGATGTCACCGGGTTCAGTATTGATGTGTTTAAAGCTGTAGTGGAACTGTTACCATATGCGCTTCCTTATGAGTTGATTCCCTATGCATATCCTAATGGCACTAGCGCTGGCACATATAATGATTTAATCTATCAAGTATACCTTGGGAGCTACACTGCTAATCTAGCATCACTATTAACTATCCCAAAGCTCCGACCAGCTGTTAACGATATAAATGATCTTCTAAGGAATGGTGATAATGTGGGCTACATGAGGGGTGCTTATGTTTATGGTCTCTTAAAAGAAGTAAAGTTTGATGATTCCAAGCTCAAGGCTTATGGATCTATGGAAGAAATAGATGACGCTCTTTCAAAAGGGAGTGCAAATGGTGGCATTTCCAAAAATTCCCCTCTTGTATCTGACATTACACAAGCAATCCTAAATTTGACGGATGATGGATTGATGACCAAGATTGAAGATAAATGGATCAAGAAAGATAGTAACTGTAAAGACTCTGATGGGAATTTTTCTAGTAGTGCTCTTGGTCTTGACAGCTTTTGGGGCCTTTTTTTAATTGCAGGGATAGCGTCAATATTTGCTCTAGTCATATTTGTAACTTCCTTCTTGTATGAACATAAGCATGTCTTGATGCCCCCTGATTCAGGCACCTCTAAGTTGAAAAGGATCAGAACCATGTTCGAGATCTTCAATGAAAAAAAACTTAGCTATCATACATTTAGAAGCAGTCGACATTCAGACAGTGGTGTTGGTGCTCAAGATCATGAAGTGAAAGCCTTATCACCAAATAACAATTGGCCAGAAAGTCCACAAAGCTATACCAACCACACAGATGCAACTTCTGTATTTTCTGATCGAGAGCAAGAAACACCATCTCATGGTCAAGCATCTCCGGAAACCTTTCCAACTATTGAGCTTGCCATAACTATTCAAGAAACCCATGAAACTCCTGAAACAACTCGATCAAGAGCATAA

Protein Analysis

706

Amino Acids

78.02

Weight (kDa)

5.77

Isoelectric Point (pI)

30.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 2 - 298 2.8e-60 Receptor family ligand binding region
Peripla_BP_6 PF13458 8 - 232 1e-11 Periplasmic binding protein
Lig_chan PF00060 429 - 572 2.2e-11 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1793
AccB7I CCANNNNNTGG 5 cut(s) 929, 1011, 1044, 1061, 2024
AccI GTMKAC 3 cut(s) 207, 1287, 1876
AccIII TCCGGA 1 cut(s) 2038
AclWI GGATC 6 cut(s) 458, 499, 1045, 1477, 1622, 1820
AcoI YGGCCR 2 cut(s) 1013, 1943
AcsI RAATTY 6 cut(s) 502, 563, 952, 1531, 1570, 1651
AcuI CTGAAG 1 cut(s) 83
AfaI GTAC 3 cut(s) 218, 291, 1066
AfeI AGCGCT 1 cut(s) 1255
AfiI CCNNNNNNNGG 6 cut(s) 929, 1011, 1044, 1061, 1790, 2024
Alw21I GWGCWC 3 cut(s) 107, 1669, 1903
Alw26I GTCTC 2 cut(s) 769, 1427
AlwI GGATC 6 cut(s) 458, 499, 1045, 1477, 1622, 1820
Ama87I CYCGRG 1 cut(s) 257
Aor13HI TCCGGA 1 cut(s) 2038
Aor51HI AGCGCT 1 cut(s) 1255
AoxI GGCC 3 cut(s) 1013, 1690, 1943
ApeKI GCWGC 1 cut(s) 656
ApoI RAATTY 6 cut(s) 502, 563, 952, 1531, 1570, 1651
Asp700I GAANNNNTTC 2 cut(s) 724, 2046
AspLEI GCGC 2 cut(s) 1210, 1256
AspS9I GGNCC 2 cut(s) 1001, 1690
AsuC2I CCSGG 2 cut(s) 1017, 1159
AsuHPI GGTGA 4 cut(s) 839, 1147, 1394, 1920
AvaI CYCGRG 1 cut(s) 257
AvaII GGWCC 1 cut(s) 1001
BalI TGGCCA 1 cut(s) 1945
BanI GGYRCC 1 cut(s) 1793
BanII GRGCYC 1 cut(s) 107
BbsI GAAGAC 1 cut(s) 355
Bbv12I GWGCWC 3 cut(s) 107, 1669, 1903
BbvI GCAGC 1 cut(s) 668
BccI CCATC 7 cut(s) 174, 986, 1038, 1091, 1577, 1640, 2026
BcgI CGANNNNNNTGC 2 cut(s) 248, 282
BclI TGATCA 1 cut(s) 313
BcnI CCSGG 2 cut(s) 1017, 1159
BcoDI GTCTC 2 cut(s) 769, 1427
BfaI CTAG 5 cut(s) 357, 1251, 1313, 1659, 1730
BfmI CTRYAG 2 cut(s) 741, 1185
BfoI RGCGCY 1 cut(s) 1257
BglII AGATCT 2 cut(s) 745, 1830
BisI GCNGC 1 cut(s) 657
BlsI GCNGC 1 cut(s) 658
Bme1390I CCNGG 2 cut(s) 1017, 1159
Bme18I GGWCC 1 cut(s) 1001
BmeT110I CYCGRG 1 cut(s) 257
BmgT120I GGNCC 2 cut(s) 1001, 1690
BmiI GGNNCC 3 cut(s) 1003, 1691, 1795
BmrFI CCNGG 2 cut(s) 1017, 1159
BmrI ACTGGG 1 cut(s) 391
BmuI ACTGGG 1 cut(s) 391
BoxI GACNNNNGTC 1 cut(s) 359
BpiI GAAGAC 1 cut(s) 355
BplI GAGNNNNNCTC 2 cut(s) 1013, 1045
BpuEI CTTGAG 2 cut(s) 1442, 1887
BpuMI CCSGG 2 cut(s) 1017, 1159
BsaAI YACGTR 1 cut(s) 205
BsaI GGTCTC 2 cut(s) 769, 1427
BsaJI CCNNGG 3 cut(s) 408, 672, 1291
BsaWI WCCGGW 1 cut(s) 2038
BsaXI ACNNNNNCTCC 2 cut(s) 1074, 1104
Bsc4I CCNNNNNNNGG 6 cut(s) 929, 1011, 1044, 1061, 1790, 2024
Bse1I ACTGG 3 cut(s) 397, 807, 1088
Bse3DI GCAATG 1 cut(s) 492
BseAI TCCGGA 1 cut(s) 2038
BseDI CCNNGG 3 cut(s) 408, 672, 1291
BseGI GGATG 6 cut(s) 185, 392, 1025, 1049, 1102, 1585
BseLI CCNNNNNNNGG 6 cut(s) 929, 1011, 1044, 1061, 1790, 2024
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 1 cut(s) 782
BseNI ACTGG 3 cut(s) 397, 807, 1088
BseXI GCAGC 1 cut(s) 668
BshFI GGCC 3 cut(s) 1015, 1692, 1945
BshNI GGYRCC 1 cut(s) 1793
BsiHKAI GWGCWC 3 cut(s) 107, 1669, 1903
BsiHKCI CYCGRG 1 cut(s) 257
BsiSI CCGG 3 cut(s) 1016, 1158, 2039
BslFI GGGAC 2 cut(s) 179, 260
BslI CCNNNNNNNGG 6 cut(s) 929, 1011, 1044, 1061, 1790, 2024
BsmAI GTCTC 2 cut(s) 769, 1427
BsmFI GGGAC 2 cut(s) 179, 260
BsmI GAATGC 1 cut(s) 700
BsnI GGCC 3 cut(s) 1015, 1692, 1945
Bso31I GGTCTC 2 cut(s) 769, 1427
BsoBI CYCGRG 1 cut(s) 257
Bsp1286I GDGCHC 3 cut(s) 107, 1669, 1903
Bsp13I TCCGGA 1 cut(s) 2038
Bsp19I CCATGG 1 cut(s) 672
BspANI GGCC 3 cut(s) 1015, 1692, 1945
BspCNI CTCAG 1 cut(s) 781
BspEI TCCGGA 1 cut(s) 2038
BspHI TCATGA 1 cut(s) 1909
BspLI GGNNCC 3 cut(s) 1003, 1691, 1795
BspPI GGATC 6 cut(s) 458, 499, 1045, 1477, 1622, 1820
BspT107I GGYRCC 1 cut(s) 1793
BspTNI GGTCTC 2 cut(s) 769, 1427
BsrDI GCAATG 1 cut(s) 492
BsrI ACTGG 3 cut(s) 397, 807, 1088
BssECI CCNNGG 3 cut(s) 408, 672, 1291
BssNAI GTATAC 1 cut(s) 1288
BssT1I CCWWGG 3 cut(s) 408, 672, 1291
Bst1107I GTATAC 1 cut(s) 1288
Bst4CI ACNGT 4 cut(s) 861, 1197, 1634, 1889
BstAPI GCANNNNNTGC 2 cut(s) 379, 662
BstBAI YACGTR 1 cut(s) 205
BstC8I GCNNGC 4 cut(s) 15, 700, 1258, 2064
BstDEI CTNAG 5 cut(s) 557, 768, 1373, 1800, 1850
BstDSI CCRYGG 1 cut(s) 672
BstENI CCTNNNNNAGG 1 cut(s) 1788
BstF5I GGATG 6 cut(s) 185, 392, 1025, 1049, 1102, 1585
BstH2I RGCGCY 1 cut(s) 1257
BstHHI GCGC 2 cut(s) 1210, 1256
BstMAI GTCTC 2 cut(s) 769, 1427
BstMWI GCNNNNNNNGC 6 cut(s) 379, 653, 662, 1313, 1689, 1712
BstNSI RCATGY 1 cut(s) 1772
BstPAI GACNNNNGTC 1 cut(s) 359
BstSCI CCNGG 2 cut(s) 1015, 1157
BstSFI CTRYAG 2 cut(s) 741, 1185
BstSNI TACGTA 1 cut(s) 205
BstV1I GCAGC 1 cut(s) 668
BstV2I GAAGAC 1 cut(s) 355
BstX2I RGATCY 5 cut(s) 491, 745, 1050, 1469, 1830
BstYI RGATCY 5 cut(s) 491, 745, 1050, 1469, 1830
BstZ17I GTATAC 1 cut(s) 1288
BsuRI GGCC 3 cut(s) 1015, 1692, 1945
BtgI CCRYGG 1 cut(s) 672
BtsCI GGATG 6 cut(s) 185, 392, 1025, 1049, 1102, 1585
BtsI GCAGTG 1 cut(s) 1302
BtsIMutI CAGTG 4 cut(s) 1095, 1146, 1302, 1894
Cac8I GCNNGC 4 cut(s) 15, 700, 1258, 2064
CciI TCATGA 1 cut(s) 1909
CfoI GCGC 2 cut(s) 1210, 1256
Cfr13I GGNCC 2 cut(s) 1001, 1690
CseI GACGC 2 cut(s) 1499, 1704
Csp6I GTAC 3 cut(s) 217, 290, 1065
CviQI GTAC 3 cut(s) 217, 290, 1065
DdeI CTNAG 5 cut(s) 557, 768, 1373, 1800, 1850
DraI TTTAAA 2 cut(s) 480, 1180
EaeI YGGCCR 2 cut(s) 1013, 1943
Ecl136II GAGCTC 1 cut(s) 105
Eco105I TACGTA 1 cut(s) 205
Eco130I CCWWGG 3 cut(s) 408, 672, 1291
Eco24I GRGCYC 1 cut(s) 107
Eco31I GGTCTC 2 cut(s) 769, 1427
Eco32I GATATC 1 cut(s) 641
Eco47I GGWCC 1 cut(s) 1001
Eco47III AGCGCT 1 cut(s) 1255
Eco53kI GAGCTC 1 cut(s) 105
Eco57I CTGAAG 1 cut(s) 83
Eco88I CYCGRG 1 cut(s) 257
EcoICRI GAGCTC 1 cut(s) 105
EcoNI CCTNNNNNAGG 1 cut(s) 1788
EcoO109I RGGNCCY 1 cut(s) 1690
EcoRI GAATTC 3 cut(s) 502, 563, 952
EcoRV GATATC 1 cut(s) 641
EcoT14I CCWWGG 3 cut(s) 408, 672, 1291
EcoT22I ATGCAT 1 cut(s) 1237
EcoT38I GRGCYC 1 cut(s) 107
ErhI CCWWGG 3 cut(s) 408, 672, 1291
FalI AAGNNNNNCTT 4 cut(s) 1275, 1307, 1757, 1789
FaqI GGGAC 2 cut(s) 179, 260
FauNDI CATATG 2 cut(s) 375, 1204
FbaI TGATCA 1 cut(s) 313
FblI GTMKAC 3 cut(s) 207, 1287, 1876
Fnu4HI GCNGC 1 cut(s) 657
FokI GGATG 6 cut(s) 192, 379, 1012, 1056, 1109, 1592
FriOI GRGCYC 1 cut(s) 107
Fsp4HI GCNGC 1 cut(s) 657
FspBI CTAG 5 cut(s) 357, 1251, 1313, 1659, 1730
GlaI GCGC 2 cut(s) 1209, 1255
GluI GCNGC 1 cut(s) 657
HaeII RGCGCY 1 cut(s) 1257
HaeIII GGCC 3 cut(s) 1015, 1692, 1945
HapII CCGG 3 cut(s) 1016, 1158, 2039
HgaI GACGC 2 cut(s) 1499, 1704
HhaI GCGC 2 cut(s) 1210, 1256
Hin6I GCGC 2 cut(s) 1208, 1254
HinP1I GCGC 2 cut(s) 1208, 1254
HincII GTYRAC 3 cut(s) 864, 1354, 1877
HindII GTYRAC 3 cut(s) 864, 1354, 1877
HindIII AAGCTT 2 cut(s) 554, 700
HinfI GANTC 9 cut(s) 134, 228, 360, 629, 1022, 1225, 1448, 1640, 1787
HpaI GTTAAC 1 cut(s) 1354
HpaII CCGG 3 cut(s) 1016, 1158, 2039
HphI GGTGA 4 cut(s) 839, 1147, 1394, 1920
Hpy166II GTNNAC 7 cut(s) 208, 290, 864, 1288, 1354, 1877, 1955
Hpy188I TCNGA 8 cut(s) 102, 815, 1343, 1549, 1645, 1817, 1885, 1999
Hpy8I GTNNAC 7 cut(s) 208, 290, 864, 1288, 1354, 1877, 1955
HpyAV CCTTC 5 cut(s) 93, 218, 927, 1087, 1759
HpyCH4III ACNGT 4 cut(s) 861, 1197, 1634, 1889
HpyCH4IV ACGT 1 cut(s) 204
HpyF10VI GCNNNNNNNGC 6 cut(s) 379, 653, 662, 1313, 1689, 1712
HpyF3I CTNAG 5 cut(s) 557, 768, 1373, 1800, 1850
HpySE526I ACGT 1 cut(s) 204
HspAI GCGC 2 cut(s) 1208, 1254
Kpn2I TCCGGA 1 cut(s) 2038
Ksp22I TGATCA 1 cut(s) 313
KspAI GTTAAC 1 cut(s) 1354
LmnI GCTCC 3 cut(s) 110, 1296, 1344
Lsp1109I GCAGC 1 cut(s) 668
MaeI CTAG 5 cut(s) 357, 1251, 1313, 1659, 1730
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 5 cut(s) 1120, 1153, 1197, 1628, 1741
MboII GAAGA 5 cut(s) 355, 1361, 1490, 1616, 1825
MfeI CAATTG 1 cut(s) 1939
MflI RGATCY 5 cut(s) 491, 745, 1050, 1469, 1830
MhlI GDGCHC 3 cut(s) 107, 1669, 1903
MlsI TGGCCA 1 cut(s) 1945
MluNI TGGCCA 1 cut(s) 1945
MlyI GAGTC 4 cut(s) 128, 369, 1031, 1634
MmeI TCCRAC 3 cut(s) 616, 1366, 2075
MnlI CCTC 8 cut(s) 177, 253, 809, 1039, 1062, 1395, 1548, 1807
Mox20I TGGCCA 1 cut(s) 1945
Mph1103I ATGCAT 1 cut(s) 1237
MroI TCCGGA 1 cut(s) 2038
MroXI GAANNNNTTC 2 cut(s) 724, 2046
MscI TGGCCA 1 cut(s) 1945
MslI CAYNNNNRTG 2 cut(s) 1767, 1977
Msp20I TGGCCA 1 cut(s) 1945
MspA1I CMGCKG 1 cut(s) 1349
MspI CCGG 3 cut(s) 1016, 1158, 2039
MspR9I CCNGG 2 cut(s) 1017, 1159
MunI CAATTG 1 cut(s) 1939
Mva1269I GAATGC 1 cut(s) 700
MwoI GCNNNNNNNGC 6 cut(s) 379, 653, 662, 1313, 1689, 1712
NciI CCSGG 2 cut(s) 1017, 1159
NcoI CCATGG 1 cut(s) 672
NdeI CATATG 2 cut(s) 375, 1204
NlaIV GGNNCC 3 cut(s) 1003, 1691, 1795
NmuCI GTSAC 1 cut(s) 1153
NsiI ATGCAT 1 cut(s) 1237
NspI RCATGY 1 cut(s) 1772
PaeR7I CTCGAG 1 cut(s) 257
PagI TCATGA 1 cut(s) 1909
PctI GAATGC 1 cut(s) 700
PdmI GAANNNNTTC 2 cut(s) 724, 2046
PfeI GAWTC 5 cut(s) 228, 629, 1225, 1448, 1787
PflMI CCANNNNNTGG 5 cut(s) 929, 1011, 1044, 1061, 2024
PkrI GCNGC 1 cut(s) 658
PleI GAGTC 4 cut(s) 128, 368, 1030, 1634
PpsI GAGTC 4 cut(s) 128, 368, 1030, 1634
Ppu21I YACGTR 1 cut(s) 205
PshAI GACNNNNGTC 1 cut(s) 359
Psp124BI GAGCTC 1 cut(s) 107
PspN4I GGNNCC 3 cut(s) 1003, 1691, 1795
PspPI GGNCC 2 cut(s) 1001, 1690
PspXI VCTCGAGB 1 cut(s) 257
PsuI RGATCY 5 cut(s) 491, 745, 1050, 1469, 1830
PvuII CAGCTG 1 cut(s) 1349
RsaI GTAC 3 cut(s) 218, 291, 1066
RsaNI GTAC 3 cut(s) 217, 290, 1065
RseI CAYNNNNRTG 2 cut(s) 1767, 1977
SacI GAGCTC 1 cut(s) 107
SalI GTCGAC 1 cut(s) 1875
SatI GCNGC 1 cut(s) 657
Sau96I GGNCC 2 cut(s) 1001, 1690
SchI GAGTC 4 cut(s) 128, 369, 1031, 1634
ScrFI CCNGG 2 cut(s) 1017, 1159
SduI GDGCHC 3 cut(s) 107, 1669, 1903
SfcI CTRYAG 2 cut(s) 741, 1185
Sfr274I CTCGAG 1 cut(s) 257
SinI GGWCC 1 cut(s) 1001
SlaI CTCGAG 1 cut(s) 257
SmiMI CAYNNNNRTG 2 cut(s) 1767, 1977
SmlI CTYRAG 3 cut(s) 257, 1457, 1902
SmoI CTYRAG 3 cut(s) 257, 1457, 1902
SnaBI TACGTA 1 cut(s) 205
SspI AATATT 1 cut(s) 1722
SspMI CTAG 5 cut(s) 357, 1251, 1313, 1659, 1730
SstI GAGCTC 1 cut(s) 107
StyD4I CCNGG 2 cut(s) 1015, 1157
StyI CCWWGG 3 cut(s) 408, 672, 1291
TaaI ACNGT 4 cut(s) 861, 1197, 1634, 1889
TaiI ACGT 1 cut(s) 207
TaqI TCGA 7 cut(s) 258, 283, 506, 1827, 1876, 2002, 2107
TatI WGTACW 1 cut(s) 289
TfiI GAWTC 5 cut(s) 228, 629, 1225, 1448, 1787
TscAI CASTG 4 cut(s) 1095, 1153, 1309, 1894
TseFI GTSAC 1 cut(s) 1153
TseI GCWGC 1 cut(s) 656
Tsp45I GTSAC 1 cut(s) 1153
TspDTI ATGAA 9 cut(s) 355, 446, 515, 717, 956, 1773, 1854, 1926, 2103
TspGWI ACGGA 2 cut(s) 1021, 1592
TspRI CASTG 4 cut(s) 1095, 1153, 1309, 1894
Van91I CCANNNNNTGG 5 cut(s) 929, 1011, 1044, 1061, 2024
VpaK11BI GGWCC 1 cut(s) 1001
XagI CCTNNNNNAGG 1 cut(s) 1788
XapI RAATTY 6 cut(s) 502, 563, 952, 1531, 1570, 1651
XceI RCATGY 1 cut(s) 1772
XcmI CCANNNNNNNNNTGG 1 cut(s) 1938
XhoI CTCGAG 1 cut(s) 257
XmiI GTMKAC 3 cut(s) 207, 1287, 1876
XmnI GAANNNNTTC 2 cut(s) 724, 2046
XspI CTAG 5 cut(s) 357, 1251, 1313, 1659, 1730
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.