FvH4_3g22781

Glutamate receptor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
15792085 .. 15797315
5231 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g22781.t1

Sequence Viewer

Length: 2253 bp
ATGGAGAATCAGAGAAGGAGTATCCTAGTTCTTTTCTCATGGATTCTCATGGTCGCCGCCTTGGGAGCTGAAAGCAGAACAACAATCCCAGTGGACGTCGGAGTTGTCATAGACCTTGATGACCCGATTGGGAAAATGTATTTGAGTTGCATCGAAATGGCACTTTCGGATTTCTATGCTTCCCATGCTCACTACAAGACTAGGCTCTTTTTGAACACCAGGAACTCCAACAGAGATGTGGTTGGTGCGGCGGCCGCAGCTTTAGATCTGATAAAGAATGTAGAAGTGAAAGCCATCTTAGGACCGGTATCGTCAATGCAGACAAGTTTCGTTGTTAATCTTGGACAACAAGCTCATGTACCCATCATATCATTTTCTGCAACAAGCCCCTCTCTTACTTCACTTCAGAGTTCCTATTTTTTTAGATTCGCACAAAATGACTTGAATCAAGTGAAAGCTGTAAGTGGTATCGTTCAAAAGTTTGGATGGAGACAAGTTGTGCCCATCTACGTAGACAATATGTACGGGGAGGGAATCATACCTTTCCTAATGGATGCCTTGCAAGAGGTTGATGCTCATATCCCATACAGAAGTTCAATTCATGAATCAGCCACTGATGTTGAAATTGAAAAGGAGCTTTACAAGTTGATGACGATGCAGACTCGAGTCTTCATTGTGCATATGAAGCCTAATCTTTCCTCTCGGTTATTTTCTAAGGCAAAAGAGTTGGGAATGATGAGTGAGGGATTTGTTTGGATCACGACTAATGGTATTGGAAACAATTTAAAGTCTATGGCTTCAGTCCTTGATTCGATGCAAGGCCTGTTAGGTGTAGAAAGTTATTTTCCAAGGACAATGAAGCTTAGACAATTCATATCAAGGTGGAAAAGAAAATTCCAACTAGACAATCCGAAAAGCATTGATGTTCAATTAGATGCTTTTGGATTGCGGGCATACGATGCTACTTTTGCATTAGCCATGGCATTTGAGAAAGTTGCTGATGTACGCTTCGCATTCCAAAAGAGGATTGCTTCTTCCTTCAATTCAACAGATCTTGATACTTTTGAGGTCTCTCAATTAGGTTCAAAACTTTCTCGTGCATTATCCACTATTAGTTTCAAAGGTATTGCTGCAAACTTCAGTCTTGTTGATAGGCAACTTAATATATCAACTTTTAAGATTGTTAATGTGAATGGTGATGGAGTAAGAACAGTTGGATATTGGACACCAGAAAAGGGAAGGATAGTAAAGCAGTTGAATGCAACAAGAAGAAGCAAAATATCAACTAATTCGAAGTGCGATCTTCGACCTATTTTATGGCCTGGAGACTCATTATCAACTCCTAAAGGATGCGATATCCCAGCAAATGGTACCAAGTTAAGAATAGGTGTTCCTATGCAGAATGGTTTTCTAGAGTTCGTTAAAGTATCTAGATATCCAAGCACTAATACAGTGGATGCCACTGGGTTCGTTATTGACGTCTTTAAGGCCGTATTGGAGATTTTACCATATGCACTTCCTTACGAGTTTGTTCCATTTGAAAAGGCTAATGGCACATACAATGATATGGTGTATCAAGTACATGATGGGAAATTTGATGCTGTAGTTGGAGATGTAACGATCAGAGCAAATAGGTCATTGAATGTGGGCTTTACTATGCCATACAGTAAAGCTGACGTAGTGATGGTTGTGCCAGTACAAGACAAGAGGACCAAAAGTGCCTGGGTTTTTTTGAAGCCTTTGACATGGGACCTCTGGATGACAACTTTGTGTTTTTTCATCTTCATTGGTTTTGTAATTTGGGTGCTTGAACATCAATTTAATGACGATTTTCGTGGTACTCCTTCGCCTCAAGTTGGCACAAGCTTCTGGTTCTCTTTCTCAACCATGGTTTTTTCACAAAGGGAAAAAGTGGTTAGTAACTTATCAAGATTTGTGATGATCATATGGATATTCGTCGTGCTAATAGTGACACAGAGCTATACAGCTAATCTAGCATCACTATTGACGATCCAACAACTCCAACCAACTGTTACAGATATAAATGATCTACTGAGGAATAGAGAAAATGTGGGCTATATGGAGAGTTCTTATATTTATGATATCTTGAGACAAAAGGGTTTTCATGATTCCAAGCTTAAAGGTTATGAAAATATGGAAGACATAGAAGAAGCTCTTTCAAAGGGGAGTGCAAATGGTGGCATTGCTGCTATTTTTCATGAAACCCCATATATGAAGCTTTTTGTTACATAA

Protein Analysis

751

Amino Acids

84.4

Weight (kDa)

8.86

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 33 - 334 1.3e-19 Periplasmic binding protein
ANF_receptor PF01094 50 - 400 4e-76 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 482 - 565 1.5e-06 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 486 - 685 1.9e-08 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 582 - 688 6.9e-33 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 99, 1482
Acc65I GGTACC 1 cut(s) 1370
AccB1I GGYRCC 1 cut(s) 1370
AccB7I CCANNNNNTGG 1 cut(s) 1367
AccI GTMKAC 1 cut(s) 513
AciI CCGC 5 cut(s) 57, 248, 251, 255, 949
AclWI GGATC 2 cut(s) 764, 2005
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 2 cut(s) 893, 1592
AcuI CTGAAG 3 cut(s) 389, 783, 1123
AcyI GRCGYC 2 cut(s) 96, 1479
AfaI GTAC 7 cut(s) 360, 524, 1005, 1372, 1581, 1698, 1840
AfiI CCNNNNNNNGG 3 cut(s) 1235, 1367, 1856
AgeI ACCGGT 1 cut(s) 304
AjnI CCWGG 3 cut(s) 218, 1321, 1721
Alw26I GTCTC 4 cut(s) 484, 1075, 1320, 2104
AlwI GGATC 2 cut(s) 764, 2005
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 1 cut(s) 663
AoxI GGCC 4 cut(s) 252, 820, 1319, 1488
ApeKI GCWGC 3 cut(s) 257, 1130, 2207
ApoI RAATTY 2 cut(s) 893, 1592
AsiGI ACCGGT 1 cut(s) 304
Asp718I GGTACC 1 cut(s) 1370
AspS9I GGNCC 3 cut(s) 302, 1710, 1750
AsuHPI GGTGA 1 cut(s) 1208
AsuII TTCGAA 1 cut(s) 1292
AvaI CYCGRG 1 cut(s) 663
AvaII GGWCC 3 cut(s) 302, 1710, 1750
BaeGI GKGCMC 1 cut(s) 504
BanI GGYRCC 1 cut(s) 1370
BauI CACGAG 1 cut(s) 1095
BbsI GAAGAC 2 cut(s) 661, 2166
BbvI GCAGC 3 cut(s) 269, 1117, 2194
BccI CCATC 7 cut(s) 302, 371, 480, 512, 1193, 1580, 1678
BceAI ACGGC 1 cut(s) 1475
BciT130I CCWGG 3 cut(s) 220, 1323, 1723
BciVI GTATCC 1 cut(s) 32
BclI TGATCA 1 cut(s) 1941
BcoDI GTCTC 4 cut(s) 484, 1075, 1320, 2104
BfaI CTAG 6 cut(s) 26, 201, 902, 1412, 1431, 1994
BfmI CTRYAG 1 cut(s) 1602
BfuI GTATCC 1 cut(s) 32
BglII AGATCT 2 cut(s) 265, 1051
BisI GCNGC 7 cut(s) 57, 249, 252, 255, 258, 1131, 2208
BlsI GCNGC 7 cut(s) 58, 250, 253, 256, 259, 1132, 2209
Bme1390I CCNGG 3 cut(s) 220, 1323, 1723
Bme18I GGWCC 3 cut(s) 302, 1710, 1750
BmeT110I CYCGRG 1 cut(s) 663
BmgT120I GGNCC 3 cut(s) 302, 1710, 1750
BmiI GGNNCC 2 cut(s) 1372, 1751
BmrFI CCNGG 3 cut(s) 220, 1323, 1723
BmrI ACTGGG 2 cut(s) 83, 1473
BmuI ACTGGG 2 cut(s) 83, 1473
BoxI GACNNNNGTC 1 cut(s) 665
BpiI GAAGAC 2 cut(s) 661, 2166
BpmI CTGGAG 1 cut(s) 1344
Bpu14I TTCGAA 1 cut(s) 1292
BpuEI CTTGAG 2 cut(s) 1836, 2128
BsaAI YACGTR 1 cut(s) 511
BsaHI GRCGYC 2 cut(s) 96, 1479
BsaI GGTCTC 1 cut(s) 1075
BsaJI CCNNGG 5 cut(s) 60, 848, 978, 1722, 1887
BsaWI WCCGGW 1 cut(s) 304
Bsc4I CCNNNNNNNGG 3 cut(s) 1235, 1367, 1856
Bse118I RCCGGY 1 cut(s) 304
Bse1I ACTGG 3 cut(s) 89, 1468, 1694
Bse3DI GCAATG 1 cut(s) 2202
BseBI CCWGG 3 cut(s) 220, 1323, 1723
BseDI CCNNGG 5 cut(s) 60, 848, 978, 1722, 1887
BseGI GGATG 5 cut(s) 491, 559, 1355, 1462, 1764
BseLI CCNNNNNNNGG 3 cut(s) 1235, 1367, 1856
BseMI GCAATG 1 cut(s) 2202
BseMII CTCAG 1 cut(s) 2045
BseNI ACTGG 3 cut(s) 89, 1468, 1694
BseSI GKGCMC 1 cut(s) 504
BseX3I CGGCCG 1 cut(s) 252
BseXI GCAGC 3 cut(s) 269, 1117, 2194
BseYI CCCAGC 1 cut(s) 1360
Bsh1285I CGRYCG 1 cut(s) 255
BshFI GGCC 4 cut(s) 254, 822, 1321, 1490
BshNI GGYRCC 1 cut(s) 1370
BshTI ACCGGT 1 cut(s) 304
BsiEI CGRYCG 1 cut(s) 255
BsiHKCI CYCGRG 1 cut(s) 663
BsiSI CCGG 1 cut(s) 305
BslFI GGGAC 1 cut(s) 1763
BslI CCNNNNNNNGG 3 cut(s) 1235, 1367, 1856
BsmAI GTCTC 4 cut(s) 484, 1075, 1320, 2104
BsmFI GGGAC 1 cut(s) 1763
BsmI GAATGC 2 cut(s) 1013, 1264
BsnI GGCC 4 cut(s) 254, 822, 1321, 1490
Bso31I GGTCTC 1 cut(s) 1075
BsoBI CYCGRG 1 cut(s) 663
Bsp119I TTCGAA 1 cut(s) 1292
Bsp1286I GDGCHC 1 cut(s) 504
Bsp143I GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
Bsp19I CCATGG 2 cut(s) 978, 1887
BspACI CCGC 5 cut(s) 57, 248, 251, 255, 949
BspANI GGCC 4 cut(s) 254, 822, 1321, 1490
BspCNI CTCAG 1 cut(s) 2046
BspHI TCATGA 3 cut(s) 601, 2125, 2218
BspLI GGNNCC 2 cut(s) 1372, 1751
BspPI GGATC 2 cut(s) 764, 2005
BspT104I TTCGAA 1 cut(s) 1292
BspT107I GGYRCC 1 cut(s) 1370
BspTNI GGTCTC 1 cut(s) 1075
BsrDI GCAATG 1 cut(s) 2202
BsrFI RCCGGY 1 cut(s) 304
BsrI ACTGG 3 cut(s) 89, 1468, 1694
BssAI RCCGGY 1 cut(s) 304
BssECI CCNNGG 5 cut(s) 60, 848, 978, 1722, 1887
BssMI GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
BssNI GRCGYC 2 cut(s) 96, 1479
BssSI CACGAG 1 cut(s) 1095
BssT1I CCWWGG 4 cut(s) 60, 848, 978, 1887
Bst2BI CACGAG 1 cut(s) 1095
Bst2UI CCWGG 3 cut(s) 220, 1323, 1723
Bst4CI ACNGT 4 cut(s) 1213, 1453, 1667, 2032
BstACI GRCGYC 2 cut(s) 96, 1479
BstAPI GCANNNNNTGC 1 cut(s) 959
BstBAI YACGTR 1 cut(s) 511
BstBI TTCGAA 1 cut(s) 1292
BstC8I GCNNGC 1 cut(s) 951
BstDEI CTNAG 4 cut(s) 298, 714, 863, 2054
BstDSI CCRYGG 2 cut(s) 978, 1887
BstF5I GGATG 5 cut(s) 491, 559, 1355, 1462, 1764
BstKTI GATC 8 cut(s) 268, 759, 1054, 1303, 1623, 1944, 2013, 2050
BstMAI GTCTC 4 cut(s) 484, 1075, 1320, 2104
BstMBI GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
BstMCI CGRYCG 1 cut(s) 255
BstMWI GCNNNNNNNGC 8 cut(s) 65, 185, 254, 257, 685, 959, 968, 1994
BstNI CCWGG 3 cut(s) 220, 1323, 1723
BstPAI GACNNNNGTC 1 cut(s) 665
BstSCI CCNGG 3 cut(s) 218, 1321, 1721
BstSFI CTRYAG 1 cut(s) 1602
BstSLI GKGCMC 1 cut(s) 504
BstSNI TACGTA 1 cut(s) 511
BstV1I GCAGC 3 cut(s) 269, 1117, 2194
BstV2I GAAGAC 2 cut(s) 661, 2166
BstX2I RGATCY 2 cut(s) 265, 1051
BstYI RGATCY 2 cut(s) 265, 1051
BstZI CGGCCG 1 cut(s) 252
BsuI GTATCC 1 cut(s) 32
BsuRI GGCC 4 cut(s) 254, 822, 1321, 1490
BtgI CCRYGG 2 cut(s) 978, 1887
BtsCI GGATG 5 cut(s) 491, 559, 1355, 1462, 1764
BtsIMutI CAGTG 4 cut(s) 96, 612, 1458, 1461
Cac8I GCNNGC 1 cut(s) 951
CaiI CAGNNNCTG 1 cut(s) 614
CciI TCATGA 3 cut(s) 601, 2125, 2218
CciNI GCGGCCGC 1 cut(s) 252
Cfr10I RCCGGY 1 cut(s) 304
Cfr13I GGNCC 3 cut(s) 302, 1710, 1750
Csp6I GTAC 7 cut(s) 359, 523, 1004, 1371, 1580, 1697, 1839
CspAI ACCGGT 1 cut(s) 304
CspCI CAANNNNNGTGG 4 cut(s) 72, 107, 601, 636
CviQI GTAC 7 cut(s) 359, 523, 1004, 1371, 1580, 1697, 1839
DdeI CTNAG 4 cut(s) 298, 714, 863, 2054
DpnI GATC 8 cut(s) 267, 758, 1053, 1302, 1622, 1943, 2012, 2049
DpnII GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
DraI TTTAAA 1 cut(s) 786
EaeI YGGCCR 1 cut(s) 252
EagI CGGCCG 1 cut(s) 252
EclXI CGGCCG 1 cut(s) 252
Eco105I TACGTA 1 cut(s) 511
Eco130I CCWWGG 4 cut(s) 60, 848, 978, 1887
Eco147I AGGCCT 1 cut(s) 822
Eco31I GGTCTC 1 cut(s) 1075
Eco32I GATATC 3 cut(s) 1357, 1436, 2104
Eco47I GGWCC 3 cut(s) 302, 1710, 1750
Eco52I CGGCCG 1 cut(s) 252
Eco57I CTGAAG 3 cut(s) 389, 783, 1123
Eco88I CYCGRG 1 cut(s) 663
EcoO109I RGGNCCY 1 cut(s) 1750
EcoRII CCWGG 3 cut(s) 218, 1321, 1721
EcoRV GATATC 3 cut(s) 1357, 1436, 2104
EcoT14I CCWWGG 4 cut(s) 60, 848, 978, 1887
ErhI CCWWGG 4 cut(s) 60, 848, 978, 1887
FalI AAGNNNNNCTT 2 cut(s) 2160, 2192
FaqI GGGAC 1 cut(s) 1763
FauI CCCGC 1 cut(s) 942
FauNDI CATATG 3 cut(s) 681, 1510, 1946
FbaI TGATCA 1 cut(s) 1941
FblI GTMKAC 1 cut(s) 513
Fnu4HI GCNGC 7 cut(s) 57, 249, 252, 255, 258, 1131, 2208
FokI GGATG 5 cut(s) 498, 566, 1362, 1469, 1771
Fsp4HI GCNGC 7 cut(s) 57, 249, 252, 255, 258, 1131, 2208
FspBI CTAG 6 cut(s) 26, 201, 902, 1412, 1431, 1994
GluI GCNGC 7 cut(s) 57, 249, 252, 255, 258, 1131, 2208
GsaI CCCAGC 1 cut(s) 1364
GsuI CTGGAG 1 cut(s) 1344
HaeIII GGCC 4 cut(s) 254, 822, 1321, 1490
HapII CCGG 1 cut(s) 305
Hin1I GRCGYC 2 cut(s) 96, 1479
HindIII AAGCTT 4 cut(s) 860, 1864, 2135, 2237
HpaII CCGG 1 cut(s) 305
HphI GGTGA 1 cut(s) 1208
Hpy166II GTNNAC 2 cut(s) 94, 514
Hpy188I TCNGA 7 cut(s) 12, 101, 169, 270, 408, 912, 1625
Hpy8I GTNNAC 2 cut(s) 94, 514
Hpy99I CGWCG 2 cut(s) 101, 1961
HpyAV CCTTC 4 cut(s) 9, 1048, 1233, 1854
HpyCH4III ACNGT 4 cut(s) 1213, 1453, 1667, 2032
HpyCH4IV ACGT 4 cut(s) 96, 510, 1479, 1677
HpyF10VI GCNNNNNNNGC 8 cut(s) 65, 185, 254, 257, 685, 959, 968, 1994
HpyF3I CTNAG 4 cut(s) 298, 714, 863, 2054
HpySE526I ACGT 4 cut(s) 96, 510, 1479, 1677
Hsp92I GRCGYC 2 cut(s) 96, 1479
KpnI GGTACC 1 cut(s) 1374
Ksp22I TGATCA 1 cut(s) 1941
Kzo9I GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
LmnI GCTCC 2 cut(s) 65, 634
Lsp1109I GCAGC 3 cut(s) 269, 1117, 2194
MaeI CTAG 6 cut(s) 26, 201, 902, 1412, 1431, 1994
MaeII ACGT 4 cut(s) 96, 510, 1479, 1677
MaeIII GTNAC 5 cut(s) 1615, 1919, 1969, 2032, 2245
MalI GATC 8 cut(s) 267, 758, 1053, 1302, 1622, 1943, 2012, 2049
MboI GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
MboII GAAGA 7 cut(s) 661, 1026, 1281, 1295, 1774, 2171, 2180
MflI RGATCY 2 cut(s) 265, 1051
MhlI GDGCHC 1 cut(s) 504
MlyI GAGTC 3 cut(s) 655, 675, 1322
MmeI TCCRAC 7 cut(s) 79, 252, 922, 1195, 1588, 2038, 2047
MslI CAYNNNNRTG 1 cut(s) 155
MspI CCGG 1 cut(s) 305
MspR9I CCNGG 3 cut(s) 220, 1323, 1723
Mva1269I GAATGC 2 cut(s) 1013, 1264
MvaI CCWGG 3 cut(s) 220, 1323, 1723
MwoI GCNNNNNNNGC 8 cut(s) 65, 185, 254, 257, 685, 959, 968, 1994
NcoI CCATGG 2 cut(s) 978, 1887
NdeI CATATG 3 cut(s) 681, 1510, 1946
NdeII GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
NlaIV GGNNCC 2 cut(s) 1372, 1751
NmuCI GTSAC 1 cut(s) 1969
NotI GCGGCCGC 1 cut(s) 252
NspV TTCGAA 1 cut(s) 1292
PaeR7I CTCGAG 1 cut(s) 663
PagI TCATGA 3 cut(s) 601, 2125, 2218
PceI AGGCCT 1 cut(s) 822
PcsI WCGNNNNNNNCGW 1 cut(s) 1476
PctI GAATGC 2 cut(s) 1013, 1264
PfeI GAWTC 8 cut(s) 7, 43, 426, 445, 534, 605, 809, 2129
PflMI CCANNNNNTGG 1 cut(s) 1367
PinAI ACCGGT 1 cut(s) 304
PkrI GCNGC 7 cut(s) 58, 250, 253, 256, 259, 1132, 2209
PleI GAGTC 3 cut(s) 655, 674, 1322
PpsI GAGTC 3 cut(s) 655, 674, 1322
Ppu21I YACGTR 1 cut(s) 511
PpuMI RGGWCCY 1 cut(s) 1750
PshAI GACNNNNGTC 1 cut(s) 665
Psp5II RGGWCCY 1 cut(s) 1750
Psp6I CCWGG 3 cut(s) 218, 1321, 1721
PspFI CCCAGC 1 cut(s) 1360
PspGI CCWGG 3 cut(s) 218, 1321, 1721
PspN4I GGNNCC 2 cut(s) 1372, 1751
PspPI GGNCC 3 cut(s) 302, 1710, 1750
PspPPI RGGWCCY 1 cut(s) 1750
PspXI VCTCGAGB 1 cut(s) 663
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 2 cut(s) 265, 1051
RsaI GTAC 7 cut(s) 360, 524, 1005, 1372, 1581, 1698, 1840
RsaNI GTAC 7 cut(s) 359, 523, 1004, 1371, 1580, 1697, 1839
RseI CAYNNNNRTG 1 cut(s) 155
SatI GCNGC 7 cut(s) 57, 249, 252, 255, 258, 1131, 2208
Sau3AI GATC 8 cut(s) 265, 756, 1051, 1300, 1620, 1941, 2010, 2047
Sau96I GGNCC 3 cut(s) 302, 1710, 1750
SchI GAGTC 3 cut(s) 655, 675, 1322
ScrFI CCNGG 3 cut(s) 220, 1323, 1723
SduI GDGCHC 1 cut(s) 504
SfcI CTRYAG 1 cut(s) 1602
Sfr274I CTCGAG 1 cut(s) 663
SfuI TTCGAA 1 cut(s) 1292
SinI GGWCC 3 cut(s) 302, 1710, 1750
SlaI CTCGAG 1 cut(s) 663
SmiMI CAYNNNNRTG 1 cut(s) 155
SmlI CTYRAG 3 cut(s) 663, 1851, 2107
SmoI CTYRAG 3 cut(s) 663, 1851, 2107
SnaBI TACGTA 1 cut(s) 511
SseBI AGGCCT 1 cut(s) 822
SsiI CCGC 5 cut(s) 57, 248, 251, 255, 949
SspMI CTAG 6 cut(s) 26, 201, 902, 1412, 1431, 1994
StuI AGGCCT 1 cut(s) 822
StyD4I CCNGG 3 cut(s) 218, 1321, 1721
StyI CCWWGG 4 cut(s) 60, 848, 978, 1887
TaaI ACNGT 4 cut(s) 1213, 1453, 1667, 2032
TaiI ACGT 4 cut(s) 99, 513, 1482, 1680
TaqI TCGA 5 cut(s) 153, 664, 812, 1292, 1306
TatI WGTACW 2 cut(s) 1579, 1696
TauI GCSGC 4 cut(s) 59, 251, 254, 257
TfiI GAWTC 8 cut(s) 7, 43, 426, 445, 534, 605, 809, 2129
TscAI CASTG 4 cut(s) 96, 619, 1458, 1468
TseFI GTSAC 1 cut(s) 1969
TseI GCWGC 3 cut(s) 257, 1130, 2207
Tsp45I GTSAC 1 cut(s) 1969
TspRI CASTG 4 cut(s) 96, 619, 1458, 1468
Van91I CCANNNNNTGG 1 cut(s) 1367
VpaK11BI GGWCC 3 cut(s) 302, 1710, 1750
XapI RAATTY 2 cut(s) 893, 1592
XbaI TCTAGA 2 cut(s) 1411, 1430
XcmI CCANNNNNNNNNTGG 1 cut(s) 235
XhoI CTCGAG 1 cut(s) 663
XmiI GTMKAC 1 cut(s) 513
XspI CTAG 6 cut(s) 26, 201, 902, 1412, 1431, 1994
ZraI GACGTC 2 cut(s) 97, 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.