Rmu_sc0003863.1_g000013

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003863.1
OG0000051
Physical Location & Seq
Forward (+)
72608 .. 76296
3689 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003863.1_g000013.1.cds

Sequence Viewer

Length: 2919 bp
atgcaaaccaactttgtaattgatcttggaggaaaagcacgagttcctataatctcattttcagcaacaagtccttccctcacttcccttccaagtacatattttttccgagctgcacagattgattcctctcaagtcaaagccgtaggggcaattatcaaagcttttggatggagagaagctgtgccaatctatattgacaatgagtacggcaagggagtattaccatacttgatcgacgccttgcagatagttgaagctcgtgtcccttatcgaagtgccatttctgggtcagcaacggatgatcaaattgaaaaggagcttttcaagttgatgacaatgcaaactagagtcttcattgtgcacatgcccggccctctaggctctcggctttttgccaaggcacaaaagctagggatgatgaatgaaggctatgtatggatcatgacagatggattgagcaatattttaagttcaacaaatgcttcagtcatcagttcaatgcagggcgcactgggggtgaggacctatgtgccgaaaacaaaagaacttgtcacttttagagagcgatggaaaaagcagttccaccaacaaaatccaaccatcattgatgttgaactagatgtgtttgcactttgggcatatgatgctgcttatgcattagccatggccgttgaagaacttgggactacaagctttgtcttccaaaccaccatttcttccacaaactcatcatcagatctagagactttgggggtatcgcaaaatggttatcagcttagccgatccttggcaaggacgaaatttagaggtcttgctggaaatttcagttttgataatggacagttacaatcttccatctttgaaatattgaatgtgattggtgctggagcaagagcaattgggttttggacacctgaaaatggactggtgagaaatctgatcattaattcgacaaacacgtctgcaccaaatttaggctttgtcatatggcccggagagcatggctccattcctaagggatgggagatcccaacaaatggaaaaaagttaagagttggagttccagtgaaggatggttttacagagtttgttaaggtggtacgtgataacagcactaatacaacaccagatgttattactggattctgtattgacgtctttaatgctgcaatggaaggattaccatatgccgttacttatgacttcattccctttgcatattcaaatggcagttctgcgggaacttatgatgatttggtctatcaagttttccttggggattatgatgcactggcagcagattcaacaattagagcaaacaggtcactgtatgtggactttacattgccatatactgaatctggtgtagtaatggtagtgccaatgaaagataaaaaccggattaaaaatgcatggattttcttgaagcctttgacatgggacttgtggcttgcgagtttcttttccttcgtcttcattggttttgtggtttggcttcttgaacaccgagtaaatgaagattttcgtgggcctcccacacatcaagttggcactggcctctggttctctttctcaacaatggtttttgcacagcgggagagagtcgttagcaacttgtctaggtttgtggtgatagtatgggtatttgtggtgctcatactgactcaaagttacacagcgagtctgacttcactgctaactgtgcaaaagcttgagccaacttatacaaatataagccatctgataagcaatactaaggagtatgtgggctgcctggatggctcttttgtctgcgaccttttacaacaacgtttccatgcttccaatattaggaagtataaatctgcacaagaatgtaaccaacttttgataaacgggagtcaaaacgggggtattgctgcagccattgacgaaactccaaacatgaagctttttcttgcaaattattgctccaattataccatgattggtcccataattaaaactgatggatttgcctttgtttttcctaaaggttcgcctcttgtaccagatgtatcaaggtcgattctgcaattcaccgagggagactcgatgaaggaacttgaacgcaaatggttcgggaacgaaacatcttgttcaggtagcaaccccatggtgtctgattctaacagtcttagccttgataggttttggggtctgtttctgattgctggcgtcacttcgttattagccctcatcatatttgtagcctcatttatatggagttatcagcacaaaggaattaggggtatgctcaaagtgtttgactgtaaagacctgagctcccatgcttttaagaagaagaatttggggccgcaaaccctaagatttgtcacgacgatatcattggtccgcgtttctggtgtctgtgccacctggcagtcgagtcctcagcactcgaaaattgtggttgcaaccattcctcatcttcttggtattaaatcggaccgagttcgtgaggtgctctgtgcggatgaccggcagtggcatgctggattgggagactgcgatttgggatcccagatccgaccttctttcctcatgacagcgcgtgcaggtgacggcttcagagcgagttttcctggttatgcggcatcagaattggtggcgttgttccccagcggggctttgggtcagagatcgtgtagttttagggtaggtagcattgctggtggcagctgtagccgatttggaggccgggaccgaggcttgggggccctgagaaatttctcatgggtgtgtgggagtgtacatatgttcttgatgggattatgtgggttgtcgtccatcggccaagacattattggattcgtatttgggatcaggagcattacacagagatgggctcagatgacttgggagccaagattttggttttggttacgaattaattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

972

Amino Acids

107.58

Weight (kDa)

8.84

Isoelectric Point (pI)

28.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2570
AasI GACNNNNNNGTC 1 cut(s) 961
AatII GACGTC 1 cut(s) 1161
Acc36I ACCTGC 1 cut(s) 2570
AccB7I CCANNNNNTGG 1 cut(s) 1040
AccII CGCG 2 cut(s) 2379, 2575
AciI CCGC 7 cut(s) 1241, 1597, 2339, 2377, 2495, 2615, 2646
AclI AACGTT 1 cut(s) 1813
AclWI GGATC 7 cut(s) 449, 780, 1024, 2535, 2542, 2548, 2852
AcoI YGGCCR 2 cut(s) 669, 2815
AcsI RAATTY 5 cut(s) 803, 823, 973, 2329, 2749
AcuI CTGAAG 2 cut(s) 471, 2575
AcyI GRCGYC 3 cut(s) 240, 1158, 2199
AfaI GTAC 5 cut(s) 97, 209, 1104, 2031, 2775
AfiI CCNNNNNNNGG 9 cut(s) 288, 790, 795, 923, 977, 1040, 1833, 2647, 2734
AflIII ACRYGT 1 cut(s) 960
AjiI CACGTC 1 cut(s) 963
AjnI CCWGG 3 cut(s) 1776, 2399, 2605
AjuI GAANNNNNNNTTGG 2 cut(s) 2315, 2347
Alw21I GWGCWC 4 cut(s) 366, 1659, 2309, 2490
Alw26I GTCTC 3 cut(s) 740, 2064, 2520
Alw44I GTGCAC 1 cut(s) 362
AlwI GGATC 7 cut(s) 449, 780, 1024, 2535, 2542, 2548, 2852
AoxI GGCC 9 cut(s) 373, 669, 992, 1532, 1558, 2336, 2719, 2739, 2815
ApaI GGGCCC 1 cut(s) 2743
ApaLI GTGCAC 1 cut(s) 362
ApeKI GCWGC 8 cut(s) 113, 650, 1169, 1298, 1773, 1901, 1904, 2700
ApoI RAATTY 5 cut(s) 803, 823, 973, 2329, 2749
AseI ATTAAT 2 cut(s) 948, 2913
Asp700I GAANNNNTTC 1 cut(s) 1524
AspLEI GCGC 2 cut(s) 512, 2575
AsuC2I CCSGG 3 cut(s) 372, 996, 2723
AsuHPI GGTGA 5 cut(s) 532, 943, 1645, 2053, 2594
AvaII GGWCC 5 cut(s) 525, 1973, 2374, 2470, 2725
AxyI CCTNAGG 1 cut(s) 1017
BaeGI GKGCMC 2 cut(s) 366, 2743
BamHI GGATCC 1 cut(s) 2540
BanII GRGCYC 3 cut(s) 2309, 2743, 2872
BauI CACGAG 2 cut(s) 39, 261
BbsI GAAGAC 3 cut(s) 346, 694, 1468
Bbv12I GWGCWC 4 cut(s) 366, 1659, 2309, 2490
BbvCI CCTCAGC 1 cut(s) 2415
BbvI GCAGC 8 cut(s) 100, 637, 1156, 1310, 1760, 1888, 1916, 2712
BceAI ACGGC 5 cut(s) 128, 226, 656, 1178, 2602
BcgI CGANNNNNNTGC 2 cut(s) 2083, 2117
BciT130I CCWGG 3 cut(s) 1778, 2401, 2607
BclI TGATCA 2 cut(s) 304, 942
BcnI CCSGG 3 cut(s) 372, 996, 2723
BcoDI GTCTC 3 cut(s) 740, 2064, 2520
BfaI CTAG 6 cut(s) 348, 380, 413, 620, 743, 1623
BfmI CTRYAG 2 cut(s) 1902, 2704
BfuAI ACCTGC 1 cut(s) 2570
BglI GCCNNNNNGGC 3 cut(s) 149, 381, 1782
BglII AGATCT 1 cut(s) 739
BlpI GCTNAGC 1 cut(s) 779
Bme1390I CCNGG 6 cut(s) 372, 996, 1778, 2401, 2607, 2723
Bme18I GGWCC 5 cut(s) 525, 1973, 2374, 2470, 2725
BmgBI CACGTC 1 cut(s) 963
BmiI GGNNCC 8 cut(s) 1009, 1975, 2337, 2542, 2726, 2740, 2741, 2886
BmrFI CCNGG 6 cut(s) 372, 996, 1778, 2401, 2607, 2723
BmrI ACTGGG 1 cut(s) 524
BmsI GCATC 3 cut(s) 637, 1279, 2627
BmuI ACTGGG 1 cut(s) 524
BpiI GAAGAC 3 cut(s) 346, 694, 1468
BplI GAGNNNNNCTC 6 cut(s) 992, 1024, 2057, 2089, 2854, 2886
BpmI CTGGAG 1 cut(s) 909
Bpu10I CCTNAGC 2 cut(s) 2303, 2415
Bpu1102I GCTNAGC 1 cut(s) 779
BpuEI CTTGAG 2 cut(s) 117, 1736
BpuMI CCSGG 3 cut(s) 372, 996, 2723
BsaAI YACGTR 1 cut(s) 1106
BsaHI GRCGYC 3 cut(s) 240, 1158, 2199
BsaJI CCNNGG 7 cut(s) 399, 666, 789, 1276, 2064, 2136, 2728
BsaWI WCCGGW 1 cut(s) 1401
BsaXI ACNNNNNCTCC 4 cut(s) 1053, 1083, 2291, 2321
Bsc4I CCNNNNNNNGG 9 cut(s) 288, 790, 795, 923, 977, 1040, 1833, 2647, 2734
Bse118I RCCGGY 1 cut(s) 2502
Bse1I ACTGG 6 cut(s) 519, 933, 1067, 1147, 1299, 1561
Bse21I CCTNAGG 1 cut(s) 1017
Bse3DI GCAATG 3 cut(s) 1179, 1346, 2688
BseBI CCWGG 3 cut(s) 1778, 2401, 2607
BseDI CCNNGG 7 cut(s) 399, 666, 789, 1276, 2064, 2136, 2728
BseGI GGATG 7 cut(s) 176, 307, 423, 1028, 1081, 1786, 2503
BseLI CCNNNNNNNGG 9 cut(s) 288, 790, 795, 923, 977, 1040, 1833, 2647, 2734
BseMI GCAATG 3 cut(s) 1179, 1346, 2688
BseMII CTCAG 4 cut(s) 2294, 2429, 2735, 2885
BseNI ACTGG 6 cut(s) 519, 933, 1067, 1147, 1299, 1561
BseSI GKGCMC 2 cut(s) 366, 2743
BseXI GCAGC 8 cut(s) 100, 637, 1156, 1310, 1760, 1888, 1916, 2712
BseYI CCCAGC 1 cut(s) 2642
BsgI GTGCAG 4 cut(s) 99, 951, 1833, 2598
Bsh1236I CGCG 2 cut(s) 2379, 2575
BshFI GGCC 9 cut(s) 375, 671, 994, 1534, 1560, 2338, 2721, 2741, 2817
BsiHKAI GWGCWC 4 cut(s) 366, 1659, 2309, 2490
BsiSI CCGG 5 cut(s) 372, 996, 1402, 2503, 2722
BslFI GGGAC 5 cut(s) 251, 700, 1457, 1959, 2738
BslI CCNNNNNNNGG 9 cut(s) 288, 790, 795, 923, 977, 1040, 1833, 2647, 2734
BsmAI GTCTC 3 cut(s) 740, 2064, 2520
BsmFI GGGAC 5 cut(s) 251, 700, 1457, 1959, 2738
BsnI GGCC 9 cut(s) 375, 671, 994, 1534, 1560, 2338, 2721, 2741, 2817
Bsp120I GGGCCC 1 cut(s) 2739
Bsp1286I GDGCHC 6 cut(s) 366, 1659, 2309, 2490, 2743, 2872
Bsp1407I TGTACA 1 cut(s) 2773
Bsp1720I GCTNAGC 1 cut(s) 779
Bsp19I CCATGG 2 cut(s) 666, 2136
BspACI CCGC 7 cut(s) 1241, 1597, 2339, 2377, 2495, 2615, 2646
BspANI GGCC 9 cut(s) 375, 671, 994, 1534, 1560, 2338, 2721, 2741, 2817
BspCNI CTCAG 4 cut(s) 2295, 2428, 2736, 2884
BspFNI CGCG 2 cut(s) 2379, 2575
BspHI TCATGA 2 cut(s) 444, 2565
BspLI GGNNCC 8 cut(s) 1009, 1975, 2337, 2542, 2726, 2740, 2741, 2886
BspMAI CTGCAG 1 cut(s) 1906
BspMI ACCTGC 1 cut(s) 2570
BspPI GGATC 7 cut(s) 449, 780, 1024, 2535, 2542, 2548, 2852
BsrDI GCAATG 3 cut(s) 1179, 1346, 2688
BsrFI RCCGGY 1 cut(s) 2502
BsrGI TGTACA 1 cut(s) 2773
BsrI ACTGG 6 cut(s) 519, 933, 1067, 1147, 1299, 1561
BssAI RCCGGY 1 cut(s) 2502
BssECI CCNNGG 7 cut(s) 399, 666, 789, 1276, 2064, 2136, 2728
BssNI GRCGYC 3 cut(s) 240, 1158, 2199
BssSI CACGAG 2 cut(s) 39, 261
BssT1I CCWWGG 5 cut(s) 399, 666, 789, 1276, 2136
Bst2BI CACGAG 2 cut(s) 39, 261
Bst2UI CCWGG 3 cut(s) 1778, 2401, 2607
Bst4CI ACNGT 5 cut(s) 846, 1332, 1705, 2156, 2294
BstACI GRCGYC 3 cut(s) 240, 1158, 2199
BstAPI GCANNNNNTGC 1 cut(s) 647
BstAUI TGTACA 1 cut(s) 2773
BstBAI YACGTR 1 cut(s) 1106
BstC8I GCNNGC 4 cut(s) 1455, 2197, 2514, 2577
BstDEI CTNAG 9 cut(s) 779, 1017, 1758, 2159, 2303, 2348, 2415, 2744, 2871
BstDSI CCRYGG 2 cut(s) 666, 2136
BstENI CCTNNNNNAGG 1 cut(s) 793
BstF5I GGATG 7 cut(s) 176, 307, 423, 1028, 1081, 1786, 2503
BstFNI CGCG 2 cut(s) 2379, 2575
BstHHI GCGC 2 cut(s) 512, 2575
BstMAI GTCTC 3 cut(s) 740, 2064, 2520
BstNI CCWGG 3 cut(s) 1778, 2401, 2607
BstNSI RCATGY 2 cut(s) 370, 2516
BstSCI CCNGG 6 cut(s) 370, 994, 1776, 2399, 2605, 2721
BstSFI CTRYAG 2 cut(s) 1902, 2704
BstSLI GKGCMC 2 cut(s) 366, 2743
BstUI CGCG 2 cut(s) 2379, 2575
BstV1I GCAGC 8 cut(s) 100, 637, 1156, 1310, 1760, 1888, 1916, 2712
BstV2I GAAGAC 3 cut(s) 346, 694, 1468
BstX2I RGATCY 4 cut(s) 739, 1029, 2540, 2547
BstXI CCANNNNNNTGG 1 cut(s) 2895
BstYI RGATCY 4 cut(s) 739, 1029, 2540, 2547
Bsu36I CCTNAGG 1 cut(s) 1017
BsuRI GGCC 9 cut(s) 375, 671, 994, 1534, 1560, 2338, 2721, 2741, 2817
BtgI CCRYGG 2 cut(s) 666, 2136
BtgZI GCGATG 1 cut(s) 583
BtrI CACGTC 1 cut(s) 963
BtsCI GGATG 7 cut(s) 176, 307, 423, 1028, 1081, 1786, 2503
BtsI GCAGTG 2 cut(s) 1694, 2513
BtsIMutI CAGTG 7 cut(s) 512, 1074, 1292, 1328, 1554, 1694, 2513
BveI ACCTGC 1 cut(s) 2570
Cac8I GCNNGC 4 cut(s) 1455, 2197, 2514, 2577
CciI TCATGA 2 cut(s) 444, 2565
CfoI GCGC 2 cut(s) 512, 2575
Cfr10I RCCGGY 1 cut(s) 2502
CpoI CGGWCCG 1 cut(s) 2470
CseI GACGC 2 cut(s) 248, 2188
Csp6I GTAC 5 cut(s) 96, 208, 1103, 2030, 2774
CspI CGGWCCG 1 cut(s) 2470
CviQI GTAC 5 cut(s) 96, 208, 1103, 2030, 2774
DdeI CTNAG 9 cut(s) 779, 1017, 1758, 2159, 2303, 2348, 2415, 2744, 2871
DrdI GACNNNNNNGTC 1 cut(s) 961
DseDI GACNNNNNNGTC 1 cut(s) 961
EaeI YGGCCR 2 cut(s) 669, 2815
Ecl136II GAGCTC 1 cut(s) 2307
Eco130I CCWWGG 5 cut(s) 399, 666, 789, 1276, 2136
Eco24I GRGCYC 3 cut(s) 2309, 2743, 2872
Eco32I GATATC 1 cut(s) 2367
Eco47I GGWCC 5 cut(s) 525, 1973, 2374, 2470, 2725
Eco53kI GAGCTC 1 cut(s) 2307
Eco57I CTGAAG 2 cut(s) 471, 2575
Eco81I CCTNAGG 1 cut(s) 1017
EcoICRI GAGCTC 1 cut(s) 2307
EcoNI CCTNNNNNAGG 1 cut(s) 793
EcoO109I RGGNCCY 3 cut(s) 525, 2739, 2740
EcoRII CCWGG 3 cut(s) 1776, 2399, 2605
EcoRV GATATC 1 cut(s) 2367
EcoT14I CCWWGG 5 cut(s) 399, 666, 789, 1276, 2136
EcoT22I ATGCAT 2 cut(s) 661, 1417
EcoT38I GRGCYC 3 cut(s) 2309, 2743, 2872
ErhI CCWWGG 5 cut(s) 399, 666, 789, 1276, 2136
FalI AAGNNNNNCTT 2 cut(s) 1260, 1292
FaqI GGGAC 5 cut(s) 251, 700, 1457, 1959, 2738
FauI CCCGC 3 cut(s) 1234, 1590, 2639
FauNDI CATATG 4 cut(s) 643, 989, 1189, 2778
FbaI TGATCA 2 cut(s) 304, 942
FokI GGATG 7 cut(s) 183, 314, 430, 1035, 1088, 1793, 2510
FriOI GRGCYC 3 cut(s) 2309, 2743, 2872
FspBI CTAG 6 cut(s) 348, 380, 413, 620, 743, 1623
GlaI GCGC 2 cut(s) 511, 2574
GsaI CCCAGC 1 cut(s) 2646
GsuI CTGGAG 1 cut(s) 909
HaeIII GGCC 9 cut(s) 375, 671, 994, 1534, 1560, 2338, 2721, 2741, 2817
HapII CCGG 5 cut(s) 372, 996, 1402, 2503, 2722
HgaI GACGC 2 cut(s) 248, 2188
HhaI GCGC 2 cut(s) 512, 2575
Hin1I GRCGYC 3 cut(s) 240, 1158, 2199
Hin6I GCGC 2 cut(s) 510, 2573
HinP1I GCGC 2 cut(s) 510, 2573
HindIII AAGCTT 4 cut(s) 162, 694, 1712, 1931
HpaII CCGG 5 cut(s) 372, 996, 1402, 2503, 2722
HphI GGTGA 5 cut(s) 532, 943, 1645, 2053, 2594
Hpy166II GTNNAC 3 cut(s) 364, 1339, 2774
Hpy8I GTNNAC 3 cut(s) 364, 1339, 2774
Hpy99I CGWCG 2 cut(s) 242, 2365
HpyAV CCTTC 8 cut(s) 84, 98, 422, 1066, 1172, 1480, 2074, 2565
HpyCH4III ACNGT 5 cut(s) 846, 1332, 1705, 2156, 2294
HpyCH4IV ACGT 4 cut(s) 962, 1105, 1158, 1813
HpyF3I CTNAG 9 cut(s) 779, 1017, 1758, 2159, 2303, 2348, 2415, 2744, 2871
HpySE526I ACGT 4 cut(s) 962, 1105, 1158, 1813
Hsp92I GRCGYC 3 cut(s) 240, 1158, 2199
HspAI GCGC 2 cut(s) 510, 2573
Ksp22I TGATCA 2 cut(s) 304, 942
LmnI GCTCC 7 cut(s) 319, 890, 1013, 1958, 2312, 2850, 2884
Lsp1109I GCAGC 8 cut(s) 100, 637, 1156, 1310, 1760, 1888, 1916, 2712
LweI GCATC 3 cut(s) 637, 1279, 2627
MaeI CTAG 6 cut(s) 348, 380, 413, 620, 743, 1623
MaeII ACGT 4 cut(s) 962, 1105, 1158, 1813
MfeI CAATTG 1 cut(s) 900
MflI RGATCY 4 cut(s) 739, 1029, 2540, 2547
MhlI GDGCHC 6 cut(s) 366, 1659, 2309, 2490, 2743, 2872
MlyI GAGTC 7 cut(s) 360, 1614, 1660, 1693, 1891, 2066, 2419
MmeI TCCRAC 3 cut(s) 623, 1039, 2575
Mph1103I ATGCAT 2 cut(s) 661, 1417
MroXI GAANNNNTTC 1 cut(s) 1524
MslI CAYNNNNRTG 4 cut(s) 1855, 2242, 2761, 2863
MspA1I CMGCKG 3 cut(s) 1597, 2646, 2703
MspI CCGG 5 cut(s) 372, 996, 1402, 2503, 2722
MspR9I CCNGG 6 cut(s) 372, 996, 1778, 2401, 2607, 2723
MunI CAATTG 1 cut(s) 900
MvaI CCWGG 3 cut(s) 1778, 2401, 2607
MvnI CGCG 2 cut(s) 2379, 2575
NciI CCSGG 3 cut(s) 372, 996, 2723
NcoI CCATGG 2 cut(s) 666, 2136
NdeI CATATG 4 cut(s) 643, 989, 1189, 2778
NlaIV GGNNCC 8 cut(s) 1009, 1975, 2337, 2542, 2726, 2740, 2741, 2886
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 5 cut(s) 553, 1326, 2200, 2356, 2582
NsiI ATGCAT 2 cut(s) 661, 1417
NspI RCATGY 2 cut(s) 370, 2516
PaeI GCATGC 1 cut(s) 2516
PagI TCATGA 2 cut(s) 444, 2565
PaqCI CACCTGC 1 cut(s) 2570
PcsI WCGNNNNNNNCGW 1 cut(s) 959
PdmI GAANNNNTTC 1 cut(s) 1524
PfeI GAWTC 7 cut(s) 125, 1146, 1304, 1361, 2050, 2147, 2832
PflMI CCANNNNNTGG 1 cut(s) 1040
PleI GAGTC 7 cut(s) 359, 1613, 1660, 1692, 1890, 2066, 2418
PpsI GAGTC 7 cut(s) 359, 1613, 1660, 1692, 1890, 2066, 2418
Ppu21I YACGTR 1 cut(s) 1106
PpuMI RGGWCCY 1 cut(s) 525
PshBI ATTAAT 2 cut(s) 948, 2913
Psp124BI GAGCTC 1 cut(s) 2309
Psp1406I AACGTT 1 cut(s) 1813
Psp5II RGGWCCY 1 cut(s) 525
Psp6I CCWGG 3 cut(s) 1776, 2399, 2605
PspFI CCCAGC 1 cut(s) 2642
PspGI CCWGG 3 cut(s) 1776, 2399, 2605
PspN4I GGNNCC 8 cut(s) 1009, 1975, 2337, 2542, 2726, 2740, 2741, 2886
PspOMI GGGCCC 1 cut(s) 2739
PspPPI RGGWCCY 1 cut(s) 525
PstI CTGCAG 1 cut(s) 1906
PsuI RGATCY 4 cut(s) 739, 1029, 2540, 2547
PvuII CAGCTG 1 cut(s) 2703
RsaI GTAC 5 cut(s) 97, 209, 1104, 2031, 2775
RsaNI GTAC 5 cut(s) 96, 208, 1103, 2030, 2774
RseI CAYNNNNRTG 4 cut(s) 1855, 2242, 2761, 2863
Rsr2I CGGWCCG 1 cut(s) 2470
RsrII CGGWCCG 1 cut(s) 2470
SacI GAGCTC 1 cut(s) 2309
SchI GAGTC 7 cut(s) 360, 1614, 1660, 1693, 1891, 2066, 2419
ScrFI CCNGG 6 cut(s) 372, 996, 1778, 2401, 2607, 2723
SduI GDGCHC 6 cut(s) 366, 1659, 2309, 2490, 2743, 2872
SfaNI GCATC 3 cut(s) 637, 1279, 2627
SfcI CTRYAG 2 cut(s) 1902, 2704
SinI GGWCC 5 cut(s) 525, 1973, 2374, 2470, 2725
SmiMI CAYNNNNRTG 4 cut(s) 1855, 2242, 2761, 2863
SmlI CTYRAG 2 cut(s) 132, 1715
SmoI CTYRAG 2 cut(s) 132, 1715
SphI GCATGC 1 cut(s) 2516
SsiI CCGC 7 cut(s) 1241, 1597, 2339, 2377, 2495, 2615, 2646
SspI AATATT 3 cut(s) 466, 870, 1831
SspMI CTAG 6 cut(s) 348, 380, 413, 620, 743, 1623
SstI GAGCTC 1 cut(s) 2309
StyD4I CCNGG 6 cut(s) 370, 994, 1776, 2399, 2605, 2721
StyI CCWWGG 5 cut(s) 399, 666, 789, 1276, 2136
TaaI ACNGT 5 cut(s) 846, 1332, 1705, 2156, 2294
TaiI ACGT 4 cut(s) 965, 1108, 1161, 1816
TaqI TCGA 7 cut(s) 237, 274, 953, 2048, 2075, 2408, 2423
TaqII GACCGA 2 cut(s) 2487, 2742
TatI WGTACW 2 cut(s) 95, 2773
TauI GCSGC 2 cut(s) 2341, 2618
TfiI GAWTC 7 cut(s) 125, 1146, 1304, 1361, 2050, 2147, 2832
TscAI CASTG 7 cut(s) 519, 1074, 1299, 1335, 1561, 1701, 2513
TseFI GTSAC 5 cut(s) 553, 1326, 2200, 2356, 2582
TseI GCWGC 8 cut(s) 113, 650, 1169, 1298, 1773, 1901, 1904, 2700
Tsp45I GTSAC 5 cut(s) 553, 1326, 2200, 2356, 2582
TspDTI ATGAA 9 cut(s) 346, 437, 441, 1198, 1403, 1468, 1533, 1943, 2093
TspGWI ACGGA 1 cut(s) 314
TspRI CASTG 7 cut(s) 519, 1074, 1299, 1335, 1561, 1701, 2513
Van91I CCANNNNNTGG 1 cut(s) 1040
VneI GTGCAC 1 cut(s) 362
VpaK11BI GGWCC 5 cut(s) 525, 1973, 2374, 2470, 2725
VspI ATTAAT 2 cut(s) 948, 2913
XagI CCTNNNNNAGG 1 cut(s) 793
XapI RAATTY 5 cut(s) 803, 823, 973, 2329, 2749
XbaI TCTAGA 1 cut(s) 742
XceI RCATGY 2 cut(s) 370, 2516
XcmI CCANNNNNNNNNTGG 2 cut(s) 2650, 2825
XmnI GAANNNNTTC 1 cut(s) 1524
XspI CTAG 6 cut(s) 348, 380, 413, 620, 743, 1623
ZraI GACGTC 1 cut(s) 1159
Zsp2I ATGCAT 2 cut(s) 661, 1417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.