Prupe.1G399800_v2.0.a1

Glutamate receptor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35332027 .. 35336843
4817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G399800.1

Sequence Viewer

Length: 2883 bp
ATGATGACCATAACAAAGAACCCAATGTTTTTGTGCTTTCTCTTCTTCTCACGGAGTTTCAGTATGGCTGTGGCTGCGGCTGCGGAAAACAAAACGATCCTGGTGAATGTGGGCGTTGTTGTTGATCTTGATGCACAGATTCTGGGTGGGAAGATTTTTTTGAGTTGCATCAAAATGGCTCTCGAGGACTTTTATGCATCTCATGCTCACTTCAAGACCAGGCTGGTTTTGCACACCAGGAACTCCAAAAACACTGTTGTTGGTGCAGCTTCTGCAGCTCTGGATCTGATAAAGAATGTACCAGTGCAAGCAATCCTGGGGCCAGCGACATCAATGCAGGCATGCTTCGTTATTAACCTTGGAGACCAAGCTCATGTCCCCATTTTATCATTTTCTGCAACAAGCCCCTCTCTTACGTCTCTCCGAAGCTCCTACTTTTTTCGACTTACACAAACTGACTCATACCAAGTGAAAGCCATAAGTGCCATTGTTAAACATTTTGGATGGAGACAAGTTGTGCCGATATACGTCGACAATACGTATGGAGAGGGAGTCATACCCTTTTTAATTGATGCCTTGCAAGACGTTGATGCTCATGTCCCCTATCGGAGTGTCATCCCTCCATCTGCCACTGATGATCAAGTTGGTAAAGAGCTTTCCAAGTTAATGGCTATGCCAACAAGAGTGTTCATTGTGCACATGACGCCCAAGCTCTCCAACAGTCTATTTGCCAAGGCAAAAGAGATTGGAATGATGAGCAAAGGCTATGTTTGGATCTTGACTAATGGGGTAGGAAATCGCTTATGGTCAACACGTTCGGTTGCCCTAAATTCAATGCAAGGAGTATTGGGTGTGGAAACAGAGGTTCCAATAACAATGGAGCTTACAAACTTCAGAATGAAGTGGAAGAGGCAATTCCAACAAGACAATCCAGCCATCATTGATTTTGATTGTGACGTGTTTGGACTTCGAGCTTATGATGCCGCTTTCGCACTAGCCTTGGCAGTTGAACAAGTTGGGAATGCAAGCTTTGATTTCCAAAAGAGGAATCCTTCATTCAACTCAACAGATCTTGATATTTTCAAGGCCTCTCAATATGGTCCAAAGCTTGTCCAGGCCTTATCTAACACTACATTCAAAGGCCTAGCTGGAGAGTTCAGTCTTAAGGATGGGCAACTTCAACCATCAACATTTAAGATAGTTAATGTAAATGGGACTGGAGTAAGTTCAATTGCATTTTGGACACCGGAAAATGGCATGGTGAAAACATTGAATTCAACAAACATTAGTATACTTTCAACTTCTGAGAAGTGTGATCTTATACCGATTATATGGCCTGGAGGTTCGCAATCTGTTCCTAAGGGATGGGAGATCCCAACAAATGGCCAGAGGTTGAAAATTGGTGTTCCTATGAAGGTTGCTTTTACTGAGTTTGTTAAGGTAGCCAAGAATCATAGCACTAACACAACCGACGTCACGGGGTTTAGTATCGATGTCTTTAAGGCTGCACTTGAAGTATTACCATACGATCTTCCTTTTGACTTCATTCCCTTTGCAAAGCCTGATGGAACCAGCGCTGGAACTTACAATGATTTGGTCTATCAAGTATATCTTGAGGAATTTGATGCTGTGGTGGGAGATATAACAATTACAGCAAATAGATCCTTGTATGTAGACTTCACAATGCCATACACAGAATCTGGTGTGGTAATGGTTGTGCCAATCGTAGACACCGGGAGCAAAAATGCATGGGTTTTCTTGAAACCTTTGACTTGGGACTTATGGATTACAACTTTTTGTTTCTTCGTCTACATTGGTTTCGTCATTTGGGTGCTTGAACATCGAATTAATGAAGATTTCCGTGGCCCTCCCTCACATCAAGTTGGCACAAGTTTCTGGTTCTCTTTCTCAACCATGGTGTTTTCACATAAGGAAAGAGTGGTTAGCAACTTGGGCAGATTCTTGATGATAATATGGGTATTTGTTGTGCTAGTACTGTCACAAAGTTACACAGCTAATCTAGCATCACTATTAACAGCTGAACGACTCCGGCCAACTGTCACCGATATAAAGGATCTTATAAGGAGTGGGGATAGTGTCGGCTACATGAAGAATTCTTTTGTTCATGAACTCTTGAAACAAATTGGTTTTGATGAATCCAAGCTTAAGGCTATGACTTCCATGGAAGACTGTGACCAAGCTCTTTCCAAAGGGAGTGAAAAGGGTGGTATTACTGCTTTTGTTAATGAAACCCCCAACATAAAGCTTTTTCTTGCAAAATATTGTTCCAAATATACCATGATTGGTCCAATCTTCAAAACTGATGGCTTTGCCTTTGTGTTTCCAAAACGCTCCCCTCTTGTACCAGATATTTCACAGGCAATCCTAAACGTGACCGAAAGAGAGAAGACAATGAACATCGAAAACAATTGGTTCAGTCGAGGAGGTAAATGTCAAGATAACTCTGGTCCAAGGGTTTCAAGCAATATTCTTGGGCTTGAAAGCTTTTGGGGCCTATTCCTCATTGCTGGGGTGGCTTCAATTCTAGCTCTCATTATCTTTGTAGCTTCCTTCCTTTACAAGCAGAGGCATATCTTGAAGCATGCTGGGGTTCGAGCCATGTTCGAAATTTTCAACGAAAAAGACCTCAACTCCCATGCTTTCAAAAGTAGTCCACAACGAAATGGCAGTGCTGGTGATCAAGTTGAAGTGAAAACCTCACCTAATAGCAATTGGCCTGAAAGTCCATTCAGCTATTCGAACCACACAGATAAGGACTTTGTATTCCTTGATGGGCAAGAAACACCATCCACTACTAGCCATGCGTCTCCGGATATAGTTCCAACAACTGAGCTTGCCCGTCGCTATCCAAGAAATGCATAG

Protein Analysis

961

Amino Acids

106.51

Weight (kDa)

7.92

Isoelectric Point (pI)

33.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2081
AatII GACGTC 1 cut(s) 1476
AccB7I CCANNNNNTGG 1 cut(s) 1382
AccI GTMKAC 5 cut(s) 531, 1291, 1674, 1728, 1809
AccIII TCCGGA 1 cut(s) 2830
AciI CCGC 3 cut(s) 77, 83, 984
AclWI GGATC 6 cut(s) 91, 291, 782, 1366, 1656, 2082
AcoI YGGCCR 2 cut(s) 1384, 2051
AcsI RAATTY 5 cut(s) 829, 1273, 1619, 2113, 2628
AcuI CTGAAG 1 cut(s) 877
AcyI GRCGYC 2 cut(s) 704, 1473
AfaI GTAC 3 cut(s) 300, 1995, 2364
AfeI AGCGCT 1 cut(s) 1576
AfiI CCNNNNNNNGG 2 cut(s) 1253, 1382
AflII CTTAAG 2 cut(s) 1163, 2165
AflIII ACRYGT 2 cut(s) 812, 957
AjiI CACGTC 1 cut(s) 958
AjnI CCWGG 6 cut(s) 99, 218, 236, 315, 1113, 1336
Alw21I GWGCWC 1 cut(s) 699
Alw26I GTCTC 4 cut(s) 357, 423, 502, 2832
Alw44I GTGCAC 1 cut(s) 695
AlwI GGATC 6 cut(s) 91, 291, 782, 1366, 1656, 2082
AlwNI CAGNNNCTG 3 cut(s) 142, 272, 1700
Ama87I CYCGRG 1 cut(s) 182
Aor13HI TCCGGA 1 cut(s) 2830
Aor51HI AGCGCT 1 cut(s) 1576
ApaLI GTGCAC 1 cut(s) 695
ApeKI GCWGC 5 cut(s) 74, 80, 266, 275, 1505
ApoI RAATTY 5 cut(s) 829, 1273, 1619, 2113, 2628
AseI ATTAAT 1 cut(s) 1848
AspLEI GCGC 1 cut(s) 1577
AspS9I GGNCC 6 cut(s) 320, 1100, 1865, 2306, 2468, 2512
AsuC2I CCSGG 1 cut(s) 1735
AsuHPI GGTGA 5 cut(s) 115, 1273, 2053, 2708, 2712
AsuII TTCGAA 2 cut(s) 2625, 2759
AvaI CYCGRG 1 cut(s) 182
AvaII GGWCC 3 cut(s) 1100, 2306, 2468
AxyI CCTNAGG 1 cut(s) 1359
BaeGI GKGCMC 1 cut(s) 699
BalI TGGCCA 1 cut(s) 1386
BarI GAAGNNNNNNTAC 2 cut(s) 1661, 1693
BbsI GAAGAC 2 cut(s) 2193, 2414
Bbv12I GWGCWC 1 cut(s) 699
BbvI GCAGC 5 cut(s) 61, 67, 278, 287, 1492
BcgI CGANNNNNNTGC 2 cut(s) 316, 350
BciT130I CCWGG 6 cut(s) 101, 220, 238, 317, 1115, 1338
BclI TGATCA 2 cut(s) 637, 2698
BcnI CCSGG 1 cut(s) 1735
BcoDI GTCTC 4 cut(s) 357, 423, 502, 2832
BfaI CTAG 6 cut(s) 995, 1145, 1991, 2021, 2546, 2817
BfmI CTRYAG 1 cut(s) 273
BfoI RGCGCY 1 cut(s) 1578
BfrI CTTAAG 2 cut(s) 1163, 2165
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 7 cut(s) 75, 78, 81, 267, 276, 984, 1506
BlsI GCNGC 7 cut(s) 76, 79, 82, 268, 277, 985, 1507
BmcAI AGTACT 1 cut(s) 1995
Bme1390I CCNGG 7 cut(s) 101, 220, 238, 317, 1115, 1338, 1735
Bme18I GGWCC 3 cut(s) 1100, 2306, 2468
BmeT110I CYCGRG 1 cut(s) 182
BmgBI CACGTC 1 cut(s) 958
BmgT120I GGNCC 6 cut(s) 320, 1100, 1865, 2306, 2468, 2512
BmiI GGNNCC 4 cut(s) 321, 867, 1570, 2513
BmrFI CCNGG 7 cut(s) 101, 220, 238, 317, 1115, 1338, 1735
BmsI GCATC 8 cut(s) 121, 177, 206, 562, 580, 970, 1615, 2033
BpiI GAAGAC 2 cut(s) 2193, 2414
BpmI CTGGAG 3 cut(s) 1170, 1239, 1359
Bpu14I TTCGAA 2 cut(s) 2625, 2759
BpuEI CTTGAG 1 cut(s) 1634
BpuMI CCSGG 1 cut(s) 1735
Bsa29I ATCGAT 1 cut(s) 1491
BsaAI YACGTR 1 cut(s) 540
BsaHI GRCGYC 2 cut(s) 704, 1473
BsaI GGTCTC 1 cut(s) 357
BsaJI CCNNGG 8 cut(s) 316, 358, 732, 999, 1861, 1914, 2181, 2471
BsaWI WCCGGW 2 cut(s) 1246, 2830
BsaXI ACNNNNNCTCC 6 cut(s) 46, 76, 537, 567, 2636, 2666
Bsc4I CCNNNNNNNGG 2 cut(s) 1253, 1382
Bse1I ACTGG 2 cut(s) 302, 1222
Bse21I CCTNAGG 1 cut(s) 1359
Bse3DI GCAATG 1 cut(s) 2523
BseAI TCCGGA 1 cut(s) 2830
BseBI CCWGG 6 cut(s) 101, 220, 238, 317, 1115, 1338
BseCI ATCGAT 1 cut(s) 1491
BseDI CCNNGG 8 cut(s) 316, 358, 732, 999, 1861, 1914, 2181, 2471
BseGI GGATG 5 cut(s) 509, 615, 1174, 1370, 2807
BseLI CCNNNNNNNGG 2 cut(s) 1253, 1382
BseMI GCAATG 1 cut(s) 2523
BseMII CTCAG 3 cut(s) 1296, 1419, 2841
BseNI ACTGG 2 cut(s) 302, 1222
BseRI GAGGAG 1 cut(s) 2457
BseSI GKGCMC 1 cut(s) 699
BseXI GCAGC 5 cut(s) 61, 67, 278, 287, 1492
BseYI CCCAGC 2 cut(s) 2528, 2606
BsgI GTGCAG 2 cut(s) 285, 1491
BshVI ATCGAT 1 cut(s) 1491
BsiHKAI GWGCWC 1 cut(s) 699
BsiHKCI CYCGRG 1 cut(s) 182
BsiSI CCGG 4 cut(s) 1247, 1734, 2050, 2831
BslFI GGGAC 4 cut(s) 362, 584, 1228, 1790
BslI CCNNNNNNNGG 2 cut(s) 1253, 1382
BsmAI GTCTC 4 cut(s) 357, 423, 502, 2832
BsmBI CGTCTC 2 cut(s) 423, 2832
BsmFI GGGAC 4 cut(s) 362, 584, 1228, 1790
BsmI GAATGC 1 cut(s) 1027
Bso31I GGTCTC 1 cut(s) 357
BsoBI CYCGRG 1 cut(s) 182
Bsp119I TTCGAA 2 cut(s) 2625, 2759
Bsp1286I GDGCHC 1 cut(s) 699
Bsp13I TCCGGA 1 cut(s) 2830
Bsp19I CCATGG 2 cut(s) 1914, 2181
BspACI CCGC 3 cut(s) 77, 83, 984
BspCNI CTCAG 3 cut(s) 1297, 1420, 2842
BspDI ATCGAT 1 cut(s) 1491
BspEI TCCGGA 1 cut(s) 2830
BspHI TCATGA 1 cut(s) 2125
BspLI GGNNCC 4 cut(s) 321, 867, 1570, 2513
BspMAI CTGCAG 1 cut(s) 277
BspPI GGATC 6 cut(s) 91, 291, 782, 1366, 1656, 2082
BspT104I TTCGAA 2 cut(s) 2625, 2759
BspTI CTTAAG 2 cut(s) 1163, 2165
BspTNI GGTCTC 1 cut(s) 357
BsrDI GCAATG 1 cut(s) 2523
BsrI ACTGG 2 cut(s) 302, 1222
BssECI CCNNGG 8 cut(s) 316, 358, 732, 999, 1861, 1914, 2181, 2471
BssNAI GTATAC 1 cut(s) 1292
BssNI GRCGYC 2 cut(s) 704, 1473
BssT1I CCWWGG 6 cut(s) 358, 732, 999, 1914, 2181, 2471
Bst1107I GTATAC 1 cut(s) 1292
Bst2UI CCWGG 6 cut(s) 101, 220, 238, 317, 1115, 1338
Bst4CI ACNGT 5 cut(s) 256, 722, 1998, 2059, 2192
Bst6I CTCTTC 2 cut(s) 47, 902
BstACI GRCGYC 2 cut(s) 704, 1473
BstAFI CTTAAG 2 cut(s) 1163, 2165
BstAPI GCANNNNNTGC 2 cut(s) 203, 272
BstBAI YACGTR 1 cut(s) 540
BstBI TTCGAA 2 cut(s) 2625, 2759
BstC8I GCNNGC 7 cut(s) 309, 324, 339, 343, 1027, 2604, 2856
BstDEI CTNAG 4 cut(s) 1305, 1359, 1428, 2850
BstDSI CCRYGG 3 cut(s) 1861, 1914, 2181
BstF5I GGATG 5 cut(s) 509, 615, 1174, 1370, 2807
BstH2I RGCGCY 1 cut(s) 1578
BstHHI GCGC 1 cut(s) 1577
BstMAI GTCTC 4 cut(s) 357, 423, 502, 2832
BstNI CCWGG 6 cut(s) 101, 220, 238, 317, 1115, 1338
BstNSI RCATGY 2 cut(s) 345, 2606
BstSCI CCNGG 7 cut(s) 99, 218, 236, 315, 1113, 1336, 1733
BstSFI CTRYAG 1 cut(s) 273
BstSLI GKGCMC 1 cut(s) 699
BstSNI TACGTA 1 cut(s) 540
BstV1I GCAGC 5 cut(s) 61, 67, 278, 287, 1492
BstV2I GAAGAC 2 cut(s) 2193, 2414
BstX2I RGATCY 6 cut(s) 283, 774, 1069, 1371, 1661, 2074
BstXI CCANNNNNNTGG 1 cut(s) 667
BstYI RGATCY 6 cut(s) 283, 774, 1069, 1371, 1661, 2074
BstZ17I GTATAC 1 cut(s) 1292
Bsu15I ATCGAT 1 cut(s) 1491
Bsu36I CCTNAGG 1 cut(s) 1359
BsuTUI ATCGAT 1 cut(s) 1491
BtgI CCRYGG 3 cut(s) 1861, 1914, 2181
BtrI CACGTC 1 cut(s) 958
BtsCI GGATG 5 cut(s) 509, 615, 1174, 1370, 2807
BtsI GCAGTG 1 cut(s) 2695
BtsIMutI CAGTG 4 cut(s) 252, 309, 630, 2695
Cac8I GCNNGC 7 cut(s) 309, 324, 339, 343, 1027, 2604, 2856
CaiI CAGNNNCTG 3 cut(s) 142, 272, 1700
CciI TCATGA 1 cut(s) 2125
CfoI GCGC 1 cut(s) 1577
Cfr13I GGNCC 6 cut(s) 320, 1100, 1865, 2306, 2468, 2512
ClaI ATCGAT 1 cut(s) 1491
CseI GACGC 2 cut(s) 712, 2814
Csp6I GTAC 3 cut(s) 299, 1994, 2363
CviQI GTAC 3 cut(s) 299, 1994, 2363
DdeI CTNAG 4 cut(s) 1305, 1359, 1428, 2850
EaeI YGGCCR 2 cut(s) 1384, 2051
Eam1104I CTCTTC 2 cut(s) 47, 902
EarI CTCTTC 2 cut(s) 47, 902
Eco105I TACGTA 1 cut(s) 540
Eco130I CCWWGG 6 cut(s) 358, 732, 999, 1914, 2181, 2471
Eco147I AGGCCT 3 cut(s) 1088, 1118, 1143
Eco31I GGTCTC 1 cut(s) 357
Eco47I GGWCC 3 cut(s) 1100, 2306, 2468
Eco47III AGCGCT 1 cut(s) 1576
Eco57I CTGAAG 1 cut(s) 877
Eco81I CCTNAGG 1 cut(s) 1359
Eco88I CYCGRG 1 cut(s) 182
EcoO109I RGGNCCY 1 cut(s) 2512
EcoRI GAATTC 2 cut(s) 1273, 2113
EcoRII CCWGG 6 cut(s) 99, 218, 236, 315, 1113, 1336
EcoT14I CCWWGG 6 cut(s) 358, 732, 999, 1914, 2181, 2471
EcoT22I ATGCAT 3 cut(s) 199, 1750, 2881
ErhI CCWWGG 6 cut(s) 358, 732, 999, 1914, 2181, 2471
Esp3I CGTCTC 2 cut(s) 423, 2832
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 4 cut(s) 362, 584, 1228, 1790
FbaI TGATCA 2 cut(s) 637, 2698
FblI GTMKAC 5 cut(s) 531, 1291, 1674, 1728, 1809
Fnu4HI GCNGC 7 cut(s) 75, 78, 81, 267, 276, 984, 1506
FokI GGATG 5 cut(s) 516, 602, 1181, 1377, 2794
Fsp4HI GCNGC 7 cut(s) 75, 78, 81, 267, 276, 984, 1506
FspBI CTAG 6 cut(s) 995, 1145, 1991, 2021, 2546, 2817
GlaI GCGC 1 cut(s) 1576
GluI GCNGC 7 cut(s) 75, 78, 81, 267, 276, 984, 1506
GsaI CCCAGC 2 cut(s) 2532, 2610
GsuI CTGGAG 3 cut(s) 1170, 1239, 1359
HaeII RGCGCY 1 cut(s) 1578
HapII CCGG 4 cut(s) 1247, 1734, 2050, 2831
HgaI GACGC 2 cut(s) 712, 2814
HhaI GCGC 1 cut(s) 1577
Hin1I GRCGYC 2 cut(s) 704, 1473
Hin6I GCGC 1 cut(s) 1575
HinP1I GCGC 1 cut(s) 1575
HincII GTYRAC 2 cut(s) 532, 810
HindII GTYRAC 2 cut(s) 532, 810
HindIII AAGCTT 5 cut(s) 1027, 1106, 2162, 2264, 2503
HinfI GANTC 9 cut(s) 139, 458, 552, 1048, 1450, 1697, 1959, 2046, 2156
HpaII CCGG 4 cut(s) 1247, 1734, 2050, 2831
HphI GGTGA 5 cut(s) 115, 1273, 2053, 2708, 2712
Hpy166II GTNNAC 8 cut(s) 532, 697, 810, 1292, 1675, 1729, 1810, 2675
Hpy188I TCNGA 5 cut(s) 288, 425, 609, 896, 1306
Hpy8I GTNNAC 8 cut(s) 532, 697, 810, 1292, 1675, 1729, 1810, 2675
Hpy99I CGWCG 3 cut(s) 533, 1475, 2865
HpyAV CCTTC 3 cut(s) 1062, 1408, 2581
HpyCH4III ACNGT 5 cut(s) 256, 722, 1998, 2059, 2192
HpyCH4IV ACGT 8 cut(s) 416, 528, 539, 585, 814, 957, 1473, 2391
HpyF3I CTNAG 4 cut(s) 1305, 1359, 1428, 2850
HpySE526I ACGT 8 cut(s) 416, 528, 539, 585, 814, 957, 1473, 2391
Hsp92I GRCGYC 2 cut(s) 704, 1473
HspAI GCGC 1 cut(s) 1575
Kpn2I TCCGGA 1 cut(s) 2830
Ksp22I TGATCA 2 cut(s) 637, 2698
LmnI GCTCC 4 cut(s) 434, 880, 1737, 2357
Lsp1109I GCAGC 5 cut(s) 61, 67, 278, 287, 1492
LweI GCATC 8 cut(s) 121, 177, 206, 562, 580, 970, 1615, 2033
MaeI CTAG 6 cut(s) 995, 1145, 1991, 2021, 2546, 2817
MaeII ACGT 8 cut(s) 416, 528, 539, 585, 814, 957, 1473, 2391
MaeIII GTNAC 7 cut(s) 953, 1474, 1998, 2006, 2059, 2192, 2392
MfeI CAATTG 3 cut(s) 1230, 2428, 2731
MflI RGATCY 6 cut(s) 283, 774, 1069, 1371, 1661, 2074
MhlI GDGCHC 1 cut(s) 699
MlsI TGGCCA 1 cut(s) 1386
MluNI TGGCCA 1 cut(s) 1386
MlyI GAGTC 3 cut(s) 452, 561, 2040
MmeI TCCRAC 3 cut(s) 741, 943, 2867
Mox20I TGGCCA 1 cut(s) 1386
Mph1103I ATGCAT 3 cut(s) 199, 1750, 2881
MroI TCCGGA 1 cut(s) 2830
MscI TGGCCA 1 cut(s) 1386
MslI CAYNNNNRTG 2 cut(s) 173, 1829
Msp20I TGGCCA 1 cut(s) 1386
MspA1I CMGCKG 1 cut(s) 2039
MspCI CTTAAG 2 cut(s) 1163, 2165
MspI CCGG 4 cut(s) 1247, 1734, 2050, 2831
MspR9I CCNGG 7 cut(s) 101, 220, 238, 317, 1115, 1338, 1735
MunI CAATTG 3 cut(s) 1230, 2428, 2731
Mva1269I GAATGC 1 cut(s) 1027
MvaI CCWGG 6 cut(s) 101, 220, 238, 317, 1115, 1338
NciI CCSGG 1 cut(s) 1735
NcoI CCATGG 2 cut(s) 1914, 2181
NlaIV GGNNCC 4 cut(s) 321, 867, 1570, 2513
NmuCI GTSAC 6 cut(s) 953, 1474, 1998, 2059, 2192, 2392
NsiI ATGCAT 3 cut(s) 199, 1750, 2881
NspI RCATGY 2 cut(s) 345, 2606
NspV TTCGAA 2 cut(s) 2625, 2759
PaeI GCATGC 2 cut(s) 345, 2606
PaeR7I CTCGAG 1 cut(s) 182
PagI TCATGA 1 cut(s) 2125
PceI AGGCCT 3 cut(s) 1088, 1118, 1143
PctI GAATGC 1 cut(s) 1027
PfeI GAWTC 6 cut(s) 139, 1048, 1450, 1697, 1959, 2156
PflMI CCANNNNNTGG 1 cut(s) 1382
PkrI GCNGC 7 cut(s) 76, 79, 82, 268, 277, 985, 1507
PleI GAGTC 3 cut(s) 452, 560, 2040
PpsI GAGTC 3 cut(s) 452, 560, 2040
Ppu21I YACGTR 1 cut(s) 540
PshBI ATTAAT 1 cut(s) 1848
PsiI TTATAA 1 cut(s) 2081
Psp6I CCWGG 6 cut(s) 99, 218, 236, 315, 1113, 1336
PspFI CCCAGC 2 cut(s) 2528, 2606
PspGI CCWGG 6 cut(s) 99, 218, 236, 315, 1113, 1336
PspN4I GGNNCC 4 cut(s) 321, 867, 1570, 2513
PspPI GGNCC 6 cut(s) 320, 1100, 1865, 2306, 2468, 2512
PstI CTGCAG 1 cut(s) 277
PstNI CAGNNNCTG 3 cut(s) 142, 272, 1700
PsuI RGATCY 6 cut(s) 283, 774, 1069, 1371, 1661, 2074
PvuII CAGCTG 1 cut(s) 2039
RsaI GTAC 3 cut(s) 300, 1995, 2364
RsaNI GTAC 3 cut(s) 299, 1994, 2363
RseI CAYNNNNRTG 2 cut(s) 173, 1829
SalI GTCGAC 1 cut(s) 530
SatI GCNGC 7 cut(s) 75, 78, 81, 267, 276, 984, 1506
Sau96I GGNCC 6 cut(s) 320, 1100, 1865, 2306, 2468, 2512
ScaI AGTACT 1 cut(s) 1995
SchI GAGTC 3 cut(s) 452, 561, 2040
ScrFI CCNGG 7 cut(s) 101, 220, 238, 317, 1115, 1338, 1735
SduI GDGCHC 1 cut(s) 699
SfaNI GCATC 8 cut(s) 121, 177, 206, 562, 580, 970, 1615, 2033
SfcI CTRYAG 1 cut(s) 273
Sfr274I CTCGAG 1 cut(s) 182
SfuI TTCGAA 2 cut(s) 2625, 2759
SinI GGWCC 3 cut(s) 1100, 2306, 2468
SlaI CTCGAG 1 cut(s) 182
SmiMI CAYNNNNRTG 2 cut(s) 173, 1829
SmlI CTYRAG 4 cut(s) 182, 1163, 1613, 2165
SmoI CTYRAG 4 cut(s) 182, 1163, 1613, 2165
SnaBI TACGTA 1 cut(s) 540
SphI GCATGC 2 cut(s) 345, 2606
SseBI AGGCCT 3 cut(s) 1088, 1118, 1143
SsiI CCGC 3 cut(s) 77, 83, 984
SspI AATATT 2 cut(s) 2282, 2488
SspMI CTAG 6 cut(s) 995, 1145, 1991, 2021, 2546, 2817
StuI AGGCCT 3 cut(s) 1088, 1118, 1143
StyD4I CCNGG 7 cut(s) 99, 218, 236, 315, 1113, 1336, 1733
StyI CCWWGG 6 cut(s) 358, 732, 999, 1914, 2181, 2471
TaaI ACNGT 5 cut(s) 256, 722, 1998, 2059, 2192
TaiI ACGT 8 cut(s) 419, 531, 542, 588, 817, 960, 1476, 2394
TaqII GACCGA 1 cut(s) 2411
TatI WGTACW 1 cut(s) 1993
TauI GCSGC 2 cut(s) 80, 986
TfiI GAWTC 6 cut(s) 139, 1048, 1450, 1697, 1959, 2156
TscAI CASTG 4 cut(s) 259, 309, 637, 2695
TseFI GTSAC 6 cut(s) 953, 1474, 1998, 2059, 2192, 2392
TseI GCWGC 5 cut(s) 74, 80, 266, 275, 1505
Tsp45I GTSAC 6 cut(s) 953, 1474, 1998, 2059, 2192, 2392
TspGWI ACGGA 2 cut(s) 67, 1850
TspRI CASTG 4 cut(s) 259, 309, 637, 2695
Van91I CCANNNNNTGG 1 cut(s) 1382
Vha464I CTTAAG 2 cut(s) 1163, 2165
VneI GTGCAC 1 cut(s) 695
VpaK11BI GGWCC 3 cut(s) 1100, 2306, 2468
VspI ATTAAT 1 cut(s) 1848
XapI RAATTY 5 cut(s) 829, 1273, 1619, 2113, 2628
XceI RCATGY 2 cut(s) 345, 2606
XhoI CTCGAG 1 cut(s) 182
XmiI GTMKAC 5 cut(s) 531, 1291, 1674, 1728, 1809
XspI CTAG 6 cut(s) 995, 1145, 1991, 2021, 2546, 2817
ZraI GACGTC 1 cut(s) 1474
ZrmI AGTACT 1 cut(s) 1995
Zsp2I ATGCAT 3 cut(s) 199, 1750, 2881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.