MD14G1064700.v1.1

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000051
Physical Location & Seq
Reverse (-)
6821789 .. 6826856
5068 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1064700.v1.1.491

Sequence Viewer

Length: 2661 bp
ATGAAGAATCCTACGAGCCATGTTTCTTGTCTCGTCTTCTGGTTGTTACTGTTTAAGACCTTATTGGCCATGGCCGACATGGCACAAAACACAACGATACCAGTAAATGTGGGGGTGATCCTTGACCTTGATTCCTTGTTTGGGAAGGTGGGTTTGAGCTGCGTTAACATGGCCCTCTCTGACTTCTATGCTTCTCATGCTTACTACAAGACTAGGCTGGTCCTTCACACCAGGGACTCCATGAGAGATGTCGTTGCTGAAGCTGCTGCAGCTTTAGAATTGATAAAGGACGTTGAAGTGCAAGCCATTATCATAGGACCGGAGTCATCAAAAGAGGCCAACTTCGTAGTCAATCTTGGAGACAAAGCTCAGGTGCCCGTAATCTCATTTTCGACAACAAGTCCTTCCCCAGCTACTTCTCAGACATCATATTTTTTCCGAATTGCACAAGATGACTCATCTCAAGTGAAAGCCATAAGTTCCATCTTCCAAGCCTTTGGATGGAGTGAAGCAGTGCTCATCTATGTTGACAACGAGTTTGGAGATGGAGTAATACCTTACCTGGGTAATGCTTTGCAAGAAGTTGGTGCTCGTATCTCCTACTGGAGTGTCATCCCTCCAGTGGTCACTGATGACCACATTGTTTCAAAGCTTCAACACTTGATGACTATGAAAACAAGGGTATTCATAGTACACATGTTGCCTTCTCTTGGTTCTAGGGTTTTTGCCAAGGCAAAAGAGATAGGCATGATGAGTGAAGGTTATGCTTGGATAATGACGGATGGGATGACAAACTTTTTTGGTTCCATAAATTCTTCTGCCATAGATAACATGCAAGGGGTGTTGGGTTTGAAAACTTACATCCCAAATACACAGGAGCTTGAACATTTCAGAGTCAGATGGCAGCAAAAATTCCAAAACGACAATCCAACTATTCTAAATGTTAAGTTGGATGTTTTTGGACTGTGGGCTTACGATACTGCTGGGGCACTGGCCATGGCAGTGGAGAAGGTTGGGAGTTCTAAAAACTTCAGCTTCCAAAAGACAAACACTTCCGACAGAGCCAATGATCTAGAAACCCTAGGTTTCTCTCTAAGTGGTCCTCAACTTGTCCAAGCACTATCGAGTACAATATTCAGAGGCCTCTCAGGTAATTTTACTCTTGTTAATGGACAACTACAGTCATCAGATTTTCAGATAGTTAATGTGATTGGTAGTGGGGAAAGAGGACTTGGATATTGGACACCCAAAGATGGACTTGTGAGAAACATGAAGTCTGCAAACACAAACACAAGCACAAACACATATTCTACCACTTCTAATGCCAGTAGTCTTGGACCTATTATATGGCCTGGTGACACAACCACCATTCCAAAAGGTTGGCAGAATCCTAACCATGGGAATACATTGAAAATTCTAGTTCCAGTGAAGCGTGGGTTTAGAGAACTTGTAAACGTGACATTTGATCCTAGCACTAACACAACCATGATCACTGGATTCTGTATTGATGTCTTTAAAGCCGCAATCGAAGAATTACCATATGCTGTTTCCTATGAGTTTTACCCTTTCGCGAAGCCTAATGGTGAGGCAGCTGGCAGCTACAATGATTTGATCTTTCAACTGTTTCTTGGGAACTATGATGCTGGAGTGGGAGATATGACGAATAGAGCAAATAGGTCGCTGTATGTTGACTTTACATTGCCTTACACAGAATCTGGGGTATCAATGGTGGTACCTATCAAACATAGCAAAAGTAGGCAAGGTGCATTGGTGTTCTTGAAGCCTTTTACTTGGGACCTTTGGGTAATAACCTGTTGTTGTTTCATCCTCATTGGATTCGTTATCTGGGTTCTTGAACACCGGATAAACGAGGATTTTCGCGGGCCTGGCGGGCCTGCCGTAAGCTTTTGGTTCTCCCTCTCAACCATGGTTTTTGCACAGAGGGAGCAACTAGTGAGCAACTTGTCTAGGTTTGTAGTGGTAGTATGGTGTTTTGTAGTCCTCATATTAACTCAAACCTACACAGCAAGTTTAACATCGCTGTTAACTGTCGAAAAGCTCCAACCAACCGTTACTGACGTAGGCCAGCTCCTCAAGAATGGAGACTTTGTTGGCTTCCAAGAAGGTTCATTTGTCCAGGAGTTACTGACAAATGAACTAGGGTTTCATGTGGAAAAGCTTAGGGCCTACAGATCGACACAAGAGTTGGCTCAACTTTTTGAAAAGGGCGGTGTTTCTGCTGCCTTTGATGAAACCCCATTCATGAACCTATTTCTTTCAACTTATTGCTCAGAATATACCATGATTGAACCAACGTTATTCAATGCTGACAGTGGTTTTGCCTTCGCCTTCCCAAAAGGTTCACCTCTAACTCTTGATGTTTCAAGGGTGATCACTAATCTGCAAGAGCAAGGTAAAATACAGAGTATCAAGGACAAATGGTTCAAGAAAGATGCAGGTTGTAAGAGGGACCCTGCCACCACTTCCATTAGCTTCAATAGTTTGTGGGGATTATTCTTGCTTGTTGGGGTTTCTTCAGCATTTGCTCTTCTCGTACATGCAGCTATGTTCTTCTATCACAATAGGCACCTGCTGATACTCCCTGATTCGAATGCTTCACTCTGGCAGAAACTATGCAAGATAGTAACCTTCACATTATAA

Protein Analysis

887

Amino Acids

98.12

Weight (kDa)

6.01

Isoelectric Point (pI)

27.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 34 - 342 8.4e-20 Periplasmic binding protein
ANF_receptor PF01094 54 - 405 1.7e-79 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 492 - 579 6.7e-08 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 494 - 816 2.8e-10 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 597 - 844 5.3e-31 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2659
AarI CACCTGC 1 cut(s) 2598
Acc36I ACCTGC 2 cut(s) 2447, 2598
Acc65I GGTACC 1 cut(s) 1732
AccB1I GGYRCC 3 cut(s) 373, 1732, 2586
AccII CGCG 2 cut(s) 1571, 1881
AciI CCGC 4 cut(s) 1521, 1881, 1890, 2229
AclI AACGTT 1 cut(s) 2315
AclWI GGATC 2 cut(s) 112, 1460
AcoI YGGCCR 3 cut(s) 66, 72, 993
AcsI RAATTY 3 cut(s) 811, 911, 1413
AcuI CTGAAG 3 cut(s) 279, 1015, 2520
AfaI GTAC 4 cut(s) 693, 1129, 1734, 2556
AfiI CCNNNNNNNGG 7 cut(s) 141, 501, 563, 622, 710, 1253, 1397
AflIII ACRYGT 1 cut(s) 696
AhdI GACNNNNNGTC 1 cut(s) 399
AhlI ACTAGT 1 cut(s) 1951
AjnI CCWGG 5 cut(s) 230, 561, 1351, 1885, 2136
AjuI GAANNNNNNNTTGG 2 cut(s) 1215, 1247
AloI GAACNNNNNNTCC 2 cut(s) 2426, 2458
Alw21I GWGCWC 2 cut(s) 519, 592
Alw26I GTCTC 3 cut(s) 35, 354, 2097
AlwI GGATC 2 cut(s) 112, 1460
AlwNI CAGNNNCTG 1 cut(s) 1715
ApeKI GCWGC 9 cut(s) 159, 263, 266, 269, 904, 1589, 1596, 2240, 2561
ApoI RAATTY 3 cut(s) 811, 911, 1413
ArsI GACNNNNNNTTYG 4 cut(s) 521, 553, 2321, 2353
Asp718I GGTACC 1 cut(s) 1732
AspA2I CCTAGG 1 cut(s) 1081
AsuHPI GGTGA 5 cut(s) 127, 1367, 1595, 2355, 2401
AsuII TTCGAA 1 cut(s) 2609
AvaII GGWCC 6 cut(s) 220, 317, 1100, 1337, 1795, 2470
AvrII CCTAGG 1 cut(s) 1081
BaeGI GKGCMC 2 cut(s) 378, 991
BalI TGGCCA 2 cut(s) 68, 995
BanI GGYRCC 3 cut(s) 373, 1732, 2586
BbsI GAAGAC 1 cut(s) 28
Bbv12I GWGCWC 2 cut(s) 519, 592
BbvI GCAGC 9 cut(s) 146, 250, 253, 281, 916, 1601, 1608, 2227, 2573
BccI CCATC 6 cut(s) 491, 495, 539, 776, 894, 1247
BceAI ACGGC 1 cut(s) 1883
BcgI CGANNNNNNTGC 2 cut(s) 1659, 1693
BciT130I CCWGG 5 cut(s) 232, 563, 1353, 1887, 2138
BclI TGATCA 2 cut(s) 1488, 2391
BcoDI GTCTC 3 cut(s) 35, 354, 2097
BcuI ACTAGT 1 cut(s) 1951
BfaI CTAG 9 cut(s) 213, 717, 1073, 1082, 1418, 1470, 1952, 1968, 2159
BfmI CTRYAG 3 cut(s) 267, 1178, 2188
BfuAI ACCTGC 2 cut(s) 2447, 2598
BglI GCCNNNNNGGC 2 cut(s) 80, 1891
BlnI CCTAGG 1 cut(s) 1081
Bme1390I CCNGG 5 cut(s) 232, 563, 1353, 1887, 2138
Bme18I GGWCC 6 cut(s) 220, 317, 1100, 1337, 1795, 2470
BmeRI GACNNNNNGTC 1 cut(s) 399
BmiI GGNNCC 7 cut(s) 375, 805, 1734, 1796, 2471, 2472, 2588
BmrFI CCNGG 5 cut(s) 232, 563, 1353, 1887, 2138
BmsI GCATC 2 cut(s) 1630, 2443
BoxI GACNNNNGTC 1 cut(s) 322
BpiI GAAGAC 1 cut(s) 28
BpmI CTGGAG 3 cut(s) 603, 625, 1665
Bpu10I CCTNAGC 2 cut(s) 369, 2180
Bpu14I TTCGAA 1 cut(s) 2609
BpuEI CTTGAG 2 cut(s) 447, 2078
BsaJI CCNNGG 8 cut(s) 69, 231, 562, 729, 996, 1081, 1396, 1926
BsaWI WCCGGW 2 cut(s) 319, 1860
BsaXI ACNNNNNCTCC 4 cut(s) 534, 564, 2094, 2124
Bsc4I CCNNNNNNNGG 7 cut(s) 141, 501, 563, 622, 710, 1253, 1397
Bse1I ACTGG 7 cut(s) 101, 608, 620, 996, 1326, 1424, 1498
Bse3DI GCAATG 1 cut(s) 1697
BseBI CCWGG 5 cut(s) 232, 563, 1353, 1887, 2138
BseDI CCNNGG 8 cut(s) 69, 231, 562, 729, 996, 1081, 1396, 1926
BseGI GGATG 7 cut(s) 506, 612, 787, 792, 861, 958, 1824
BseLI CCNNNNNNNGG 7 cut(s) 141, 501, 563, 622, 710, 1253, 1397
BseMI GCAATG 1 cut(s) 1697
BseMII CTCAG 4 cut(s) 383, 434, 1161, 2304
BseNI ACTGG 7 cut(s) 101, 608, 620, 996, 1326, 1424, 1498
BseRI GAGGAG 1 cut(s) 2081
BseSI GKGCMC 2 cut(s) 378, 991
BseXI GCAGC 9 cut(s) 146, 250, 253, 281, 916, 1601, 1608, 2227, 2573
BseYI CCCAGC 2 cut(s) 409, 983
Bsh1236I CGCG 2 cut(s) 1571, 1881
BshNI GGYRCC 3 cut(s) 373, 1732, 2586
BsiHKAI GWGCWC 2 cut(s) 519, 592
BsiSI CCGG 2 cut(s) 320, 1861
BslFI GGGAC 3 cut(s) 248, 1808, 2483
BslI CCNNNNNNNGG 7 cut(s) 141, 501, 563, 622, 710, 1253, 1397
BsmAI GTCTC 3 cut(s) 35, 354, 2097
BsmFI GGGAC 3 cut(s) 248, 1808, 2483
BsmI GAATGC 1 cut(s) 2617
Bsp119I TTCGAA 1 cut(s) 2609
Bsp1286I GDGCHC 4 cut(s) 378, 519, 592, 991
Bsp143I GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
Bsp19I CCATGG 4 cut(s) 69, 996, 1396, 1926
Bsp68I TCGCGA 1 cut(s) 1571
BspACI CCGC 4 cut(s) 1521, 1881, 1890, 2229
BspCNI CTCAG 4 cut(s) 382, 433, 1160, 2303
BspFNI CGCG 2 cut(s) 1571, 1881
BspHI TCATGA 1 cut(s) 2262
BspLI GGNNCC 7 cut(s) 375, 805, 1734, 1796, 2471, 2472, 2588
BspMAI CTGCAG 1 cut(s) 271
BspMI ACCTGC 2 cut(s) 2447, 2598
BspPI GGATC 2 cut(s) 112, 1460
BspQI GCTCTTC 1 cut(s) 2553
BspT104I TTCGAA 1 cut(s) 2609
BspT107I GGYRCC 3 cut(s) 373, 1732, 2586
BsrDI GCAATG 1 cut(s) 1697
BsrI ACTGG 7 cut(s) 101, 608, 620, 996, 1326, 1424, 1498
BssECI CCNNGG 8 cut(s) 69, 231, 562, 729, 996, 1081, 1396, 1926
BssMI GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
BssT1I CCWWGG 6 cut(s) 69, 729, 996, 1081, 1396, 1926
Bst2UI CCWGG 5 cut(s) 232, 563, 1353, 1887, 2138
Bst4CI ACNGT 7 cut(s) 51, 966, 1182, 1623, 2050, 2071, 2333
Bst6I CTCTTC 1 cut(s) 2553
BstBI TTCGAA 1 cut(s) 2609
BstC8I GCNNGC 6 cut(s) 303, 1594, 1883, 1892, 1896, 2087
BstDEI CTNAG 6 cut(s) 369, 420, 1094, 1147, 2180, 2290
BstDSI CCRYGG 4 cut(s) 69, 996, 1396, 1926
BstF5I GGATG 7 cut(s) 506, 612, 787, 792, 861, 958, 1824
BstFNI CGCG 2 cut(s) 1571, 1881
BstKTI GATC 7 cut(s) 120, 1072, 1468, 1491, 1614, 2195, 2394
BstMAI GTCTC 3 cut(s) 35, 354, 2097
BstMBI GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
BstMWI GCNNNNNNNGC 6 cut(s) 80, 197, 263, 269, 1887, 1891
BstNI CCWGG 5 cut(s) 232, 563, 1353, 1887, 2138
BstNSI RCATGY 3 cut(s) 700, 835, 2561
BstPAI GACNNNNGTC 1 cut(s) 322
BstSCI CCNGG 5 cut(s) 230, 561, 1351, 1885, 2136
BstSFI CTRYAG 3 cut(s) 267, 1178, 2188
BstSLI GKGCMC 2 cut(s) 378, 991
BstUI CGCG 2 cut(s) 1571, 1881
BstV1I GCAGC 9 cut(s) 146, 250, 253, 281, 916, 1601, 1608, 2227, 2573
BstV2I GAAGAC 1 cut(s) 28
BstXI CCANNNNNNTGG 3 cut(s) 497, 1003, 1380
BtgI CCRYGG 4 cut(s) 69, 996, 1396, 1926
BtgZI GCGATG 1 cut(s) 2022
BtsCI GGATG 7 cut(s) 506, 612, 787, 792, 861, 958, 1824
BtsI GCAGTG 2 cut(s) 519, 1008
BtsIMutI CAGTG 8 cut(s) 519, 627, 627, 989, 1008, 1431, 1491, 2338
BtuMI TCGCGA 1 cut(s) 1571
BveI ACCTGC 2 cut(s) 2447, 2598
Cac8I GCNNGC 6 cut(s) 303, 1594, 1883, 1892, 1896, 2087
CaiI CAGNNNCTG 1 cut(s) 1715
CciI TCATGA 1 cut(s) 2262
Csp6I GTAC 4 cut(s) 692, 1128, 1733, 2555
CviQI GTAC 4 cut(s) 692, 1128, 1733, 2555
DdeI CTNAG 6 cut(s) 369, 420, 1094, 1147, 2180, 2290
DpnI GATC 7 cut(s) 119, 1071, 1467, 1490, 1613, 2194, 2393
DpnII GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
DraI TTTAAA 1 cut(s) 1516
DriI GACNNNNNGTC 1 cut(s) 399
EaeI YGGCCR 3 cut(s) 66, 72, 993
Eam1104I CTCTTC 1 cut(s) 2553
Eam1105I GACNNNNNGTC 1 cut(s) 399
EarI CTCTTC 1 cut(s) 2553
Eco130I CCWWGG 6 cut(s) 69, 729, 996, 1081, 1396, 1926
Eco147I AGGCCT 1 cut(s) 1143
Eco47I GGWCC 6 cut(s) 220, 317, 1100, 1337, 1795, 2470
Eco57I CTGAAG 3 cut(s) 279, 1015, 2520
EcoO109I RGGNCCY 3 cut(s) 1795, 2184, 2470
EcoRII CCWGG 5 cut(s) 230, 561, 1351, 1885, 2136
EcoT14I CCWWGG 6 cut(s) 69, 729, 996, 1081, 1396, 1926
ErhI CCWWGG 6 cut(s) 69, 729, 996, 1081, 1396, 1926
FalI AAGNNNNNCTT 2 cut(s) 1242, 1274
FaqI GGGAC 3 cut(s) 248, 1808, 2483
FauI CCCGC 2 cut(s) 1874, 1883
FauNDI CATATG 1 cut(s) 1540
FbaI TGATCA 2 cut(s) 1488, 2391
FokI GGATG 7 cut(s) 513, 599, 794, 799, 848, 965, 1811
FspBI CTAG 9 cut(s) 213, 717, 1073, 1082, 1418, 1470, 1952, 1968, 2159
GsaI CCCAGC 2 cut(s) 413, 987
GsuI CTGGAG 3 cut(s) 603, 625, 1665
HapII CCGG 2 cut(s) 320, 1861
HincII GTYRAC 4 cut(s) 166, 529, 1690, 2046
HindII GTYRAC 4 cut(s) 166, 529, 1690, 2046
HindIII AAGCTT 3 cut(s) 650, 1903, 2177
HpaI GTTAAC 2 cut(s) 166, 2046
HpaII CCGG 2 cut(s) 320, 1861
HphI GGTGA 5 cut(s) 127, 1367, 1595, 2355, 2401
Hpy166II GTNNAC 7 cut(s) 166, 529, 694, 1453, 1690, 2046, 2363
Hpy188III TCNNGA 8 cut(s) 1073, 1570, 1777, 1853, 2095, 2263, 2375, 2446
Hpy8I GTNNAC 7 cut(s) 166, 529, 694, 1453, 1690, 2046, 2363
HpyCH4III ACNGT 7 cut(s) 51, 966, 1182, 1623, 2050, 2071, 2333
HpyCH4IV ACGT 4 cut(s) 291, 1455, 2079, 2315
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 197, 263, 269, 1887, 1891
HpyF3I CTNAG 6 cut(s) 369, 420, 1094, 1147, 2180, 2290
HpySE526I ACGT 4 cut(s) 291, 1455, 2079, 2315
KflI GGGWCCC 1 cut(s) 2470
KpnI GGTACC 1 cut(s) 1736
Ksp22I TGATCA 2 cut(s) 1488, 2391
KspAI GTTAAC 2 cut(s) 166, 2046
Kzo9I GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
LguI GCTCTTC 1 cut(s) 2553
LmnI GCTCC 4 cut(s) 877, 1945, 2064, 2094
Lsp1109I GCAGC 9 cut(s) 146, 250, 253, 281, 916, 1601, 1608, 2227, 2573
LweI GCATC 2 cut(s) 1630, 2443
MaeI CTAG 9 cut(s) 213, 717, 1073, 1082, 1418, 1470, 1952, 1968, 2159
MaeII ACGT 4 cut(s) 291, 1455, 2079, 2315
MaeIII GTNAC 7 cut(s) 45, 625, 1355, 1456, 2071, 2142, 2644
MalI GATC 7 cut(s) 119, 1071, 1467, 1490, 1613, 2194, 2393
MboI GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
MboII GAAGA 8 cut(s) 16, 28, 478, 807, 1541, 2526, 2540, 2563
MhlI GDGCHC 4 cut(s) 378, 519, 592, 991
MlsI TGGCCA 2 cut(s) 68, 995
MluCI AATT 7 cut(s) 278, 441, 811, 911, 1153, 1413, 1532
MluNI TGGCCA 2 cut(s) 68, 995
MlyI GAGTC 4 cut(s) 230, 332, 449, 903
MmeI TCCRAC 4 cut(s) 930, 953, 1080, 2086
Mox20I TGGCCA 2 cut(s) 68, 995
MscI TGGCCA 2 cut(s) 68, 995
MseI TTAA 9 cut(s) 54, 165, 945, 1167, 1203, 1515, 2009, 2033, 2045
MslI CAYNNNNRTG 2 cut(s) 1001, 1484
Msp20I TGGCCA 2 cut(s) 68, 995
MspA1I CMGCKG 1 cut(s) 1592
MspI CCGG 2 cut(s) 320, 1861
MspR9I CCNGG 5 cut(s) 232, 563, 1353, 1887, 2138
Mva1269I GAATGC 1 cut(s) 2617
MvaI CCWGG 5 cut(s) 232, 563, 1353, 1887, 2138
MvnI CGCG 2 cut(s) 1571, 1881
MwoI GCNNNNNNNGC 6 cut(s) 80, 197, 263, 269, 1887, 1891
NcoI CCATGG 4 cut(s) 69, 996, 1396, 1926
NdeI CATATG 1 cut(s) 1540
NdeII GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
NlaIV GGNNCC 7 cut(s) 375, 805, 1734, 1796, 2471, 2472, 2588
NmuCI GTSAC 3 cut(s) 625, 1355, 1456
NruI TCGCGA 1 cut(s) 1571
NspI RCATGY 3 cut(s) 700, 835, 2561
NspV TTCGAA 1 cut(s) 2609
PagI TCATGA 1 cut(s) 2262
PaqCI CACCTGC 1 cut(s) 2598
PceI AGGCCT 1 cut(s) 1143
PciI ACATGT 1 cut(s) 696
PciSI GCTCTTC 1 cut(s) 2553
PctI GAATGC 1 cut(s) 2617
PfeI GAWTC 7 cut(s) 7, 131, 1387, 1497, 1712, 1836, 2606
PfoI TCCNGGA 1 cut(s) 2136
PleI GAGTC 4 cut(s) 230, 331, 449, 902
PpsI GAGTC 4 cut(s) 230, 331, 449, 902
PpuMI RGGWCCY 2 cut(s) 1795, 2470
PscI ACATGT 1 cut(s) 696
PshAI GACNNNNGTC 1 cut(s) 322
PsiI TTATAA 1 cut(s) 2659
Psp1406I AACGTT 1 cut(s) 2315
Psp5II RGGWCCY 2 cut(s) 1795, 2470
Psp6I CCWGG 5 cut(s) 230, 561, 1351, 1885, 2136
PspFI CCCAGC 2 cut(s) 409, 983
PspGI CCWGG 5 cut(s) 230, 561, 1351, 1885, 2136
PspN4I GGNNCC 7 cut(s) 375, 805, 1734, 1796, 2471, 2472, 2588
PspPPI RGGWCCY 2 cut(s) 1795, 2470
PstI CTGCAG 1 cut(s) 271
PstNI CAGNNNCTG 1 cut(s) 1715
PvuII CAGCTG 1 cut(s) 1592
RruI TCGCGA 1 cut(s) 1571
RsaI GTAC 4 cut(s) 693, 1129, 1734, 2556
RsaNI GTAC 4 cut(s) 692, 1128, 1733, 2555
RseI CAYNNNNRTG 2 cut(s) 1001, 1484
SapI GCTCTTC 1 cut(s) 2553
SaqAI TTAA 9 cut(s) 54, 165, 945, 1167, 1203, 1515, 2009, 2033, 2045
Sau3AI GATC 7 cut(s) 117, 1069, 1465, 1488, 1611, 2192, 2391
SchI GAGTC 4 cut(s) 230, 332, 449, 903
ScrFI CCNGG 5 cut(s) 232, 563, 1353, 1887, 2138
SduI GDGCHC 4 cut(s) 378, 519, 592, 991
SfaNI GCATC 2 cut(s) 1630, 2443
SfcI CTRYAG 3 cut(s) 267, 1178, 2188
SfiI GGCCNNNNNGGCC 1 cut(s) 1891
SfuI TTCGAA 1 cut(s) 2609
SinI GGWCC 6 cut(s) 220, 317, 1100, 1337, 1795, 2470
SmiMI CAYNNNNRTG 2 cut(s) 1001, 1484
SmlI CTYRAG 2 cut(s) 462, 2093
SmoI CTYRAG 2 cut(s) 462, 2093
SpeI ACTAGT 1 cut(s) 1951
Sse9I AATT 7 cut(s) 278, 441, 811, 911, 1153, 1413, 1532
SseBI AGGCCT 1 cut(s) 1143
SsiI CCGC 4 cut(s) 1521, 1881, 1890, 2229
SspI AATATT 1 cut(s) 1134
SspMI CTAG 9 cut(s) 213, 717, 1073, 1082, 1418, 1470, 1952, 1968, 2159
StuI AGGCCT 1 cut(s) 1143
StyD4I CCNGG 5 cut(s) 230, 561, 1351, 1885, 2136
StyI CCWWGG 6 cut(s) 69, 729, 996, 1081, 1396, 1926
TaaI ACNGT 7 cut(s) 51, 966, 1182, 1623, 2050, 2071, 2333
TaiI ACGT 4 cut(s) 294, 1458, 2082, 2318
TaqI TCGA 6 cut(s) 392, 1124, 1527, 2052, 2195, 2609
TasI AATT 7 cut(s) 278, 441, 811, 911, 1153, 1413, 1532
TatI WGTACW 2 cut(s) 691, 1127
TauI GCSGC 1 cut(s) 1523
TfiI GAWTC 7 cut(s) 7, 131, 1387, 1497, 1712, 1836, 2606
Tru1I TTAA 9 cut(s) 54, 165, 945, 1167, 1203, 1515, 2009, 2033, 2045
Tru9I TTAA 9 cut(s) 54, 165, 945, 1167, 1203, 1515, 2009, 2033, 2045
TscAI CASTG 8 cut(s) 519, 627, 634, 996, 1008, 1431, 1498, 2338
TseFI GTSAC 3 cut(s) 625, 1355, 1456
TseI GCWGC 9 cut(s) 159, 263, 266, 269, 904, 1589, 1596, 2240, 2561
Tsp45I GTSAC 3 cut(s) 625, 1355, 1456
TspGWI ACGGA 1 cut(s) 794
TspRI CASTG 8 cut(s) 519, 627, 634, 996, 1008, 1431, 1498, 2338
VpaK11BI GGWCC 6 cut(s) 220, 317, 1100, 1337, 1795, 2470
XapI RAATTY 3 cut(s) 811, 911, 1413
XbaI TCTAGA 1 cut(s) 1072
XceI RCATGY 3 cut(s) 700, 835, 2561
XcmI CCANNNNNNNNNTGG 1 cut(s) 76
XmaJI CCTAGG 1 cut(s) 1081
XspI CTAG 9 cut(s) 213, 717, 1073, 1082, 1418, 1470, 1952, 1968, 2159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.