Prupe.1G400400_v2.0.a1

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000051
Physical Location & Seq
Reverse (-)
35357845 .. 35360081
2237 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G400400.1

Sequence Viewer

Length: 1872 bp
ATGGCAGTTGAAAATGTTGGGACTAAAAACTTTGGCTTCGAAAAGGCGAATGCTTCAACCAACTCATCAACTGATCTTGAATATTTTGGGGTTTCCCAAAACGGTCCAGAACTTTGCCAATCCTTGTCAAGCACTAACTTTAGAGGCCTCTCTGGGGATTTCAGCTTTGTTGATGGGCAATTACAAAATTCCATTTTTGAATTGGTTAATATGATTGGGAATGGGGCAAAAACAATTGGGTTTTGGAAACCACAGAGTGGACTTGAGAAAAAATTGAATTTGACAAACACAAATGGTCCATATTCAACCTCTAAATCTAATCTGGCACCTATTTTATGGCCAGGGGACTCTCCCTCTGTTCCCAAGGGATGGGAGATTCCCACAAACGGCAAAAGATTGAGAGTAGGAGTTCCTGTAATTGATGGTTTTGCTGAGTTTGTGAAGGTGGTGCCTGGTCCTAGCGCTAACACAACCGAAGTTTTCGGATTCTGTATCGACGTCTTCAATGCTGCAATGGCTGGATTACCATATGCTGTTACTTATGACTTCATTCCCTTTGCAAAGCCTGATGGCACAAGTGCTGGCAGCTACGATGATCTGGTCCAACAAGTTTTTCTCGGGAATTTCTATGCACTGGCCGCAGACACAACAATTAGAGCAAACAGGTCTTTGTATGTGGACTTCACATTGCCATACACAGAATCAGGGGTTGTGATGGTGGTGCCAATGAAAGACGGCAAGAGCAATGCATGGATTTTCTTGAAGCCTTTGACATGGGACCTCTGGCTCACAAGTTTGTGCTTTTTCATCTTCATTGGTTTCGCTGTTTGGGTTCTTGAACACCGTATTAACGAAGAATTTCGTGGCCCTCCCTCCCACCAAATCGGCACAAGCTTTTGGTTCTCTTTCGCAACCATGGTTTTTGCACAGCGGGAGAAGGTGGTTAGCAACTTGGCAAGGTTTGTGGTGATCGTGTGGGTGTTTGTAGTGCTGATACTGACTCAAAGTTACACAGCAAGTTTAACTTCACTGTTAACAGTTAAGCAACTTCAGCCAACTTTTTCCAATTTGGGCGATCTTATAAAGAACAAGGAGTATATCGGGTACTTCGAGGGATCTTTCGTCCGTGAGCTTCTGATCCAAAGGGGTGTTGATCCTAACAAGTTGAGGCCTTATAAATCTTCAGATGAATGCCATGAGCTTTTGACAAACAGGAGTGCAAACGGCGGCATTGCAGCCGCTATTGATGAAACCCCCAACATGAAGCTTTTTCTTGCAAAGTATTGCTCCAAATACACCATGATTGGCCCAATATTCAAAACTGATGGCTTTGGTTTTGTCTTCCCCAAAGGTTCACCTTTAGTACCAGACGTTTCGAGGGCGATTCTGAACTTGACTGAGGGAGACGTCATGAAGGAAATTGAAAACAAATGGTTTGCGGGGAATGCAACATGTTCAGATACAAAACCCACCATCTCAGATTCCAACAGTCTTGGCCTTGATAGCTTCTGGGGTCTCTTCCTCATTGCCGGGGTCTCTTCATCACTATCTCTCATCATATTTGCAGCCTCCTTCTGTAATAGGCATTGGCACATGTTCATGACAACAGGAGCTTCTGCATGGAAAAGAATCAAGGTGATGCTTAGAATCTTCGACCAAAAAGACCTCAGCTCCCATACTTTTAGAAAGACTGACTCTCAAGATGGAAAATACATGTACAATGCTGGCAGTATAGCTACATGTGTCGAGGCTTCACCAAACAATAACAGCACGCGCCCACCAAGCCCAGAGTCGATTGGCCATTCAAACCCCACAAATCCACACTCACCTTTCTTCAGAGAAGGAATATTACCGGTTGTTGTTGGTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

624

Amino Acids

68.7

Weight (kDa)

6.73

Isoelectric Point (pI)

32.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1082, 1176
AatII GACGTC 2 cut(s) 501, 1410
AccB1I GGYRCC 3 cut(s) 325, 448, 721
AccB7I CCANNNNNTGG 2 cut(s) 257, 369
AccII CGCG 1 cut(s) 1774
AciI CCGC 5 cut(s) 639, 931, 1227, 1239, 1439
AclWI GGATC 3 cut(s) 1123, 1132, 1148
AcoI YGGCCR 3 cut(s) 338, 636, 1798
AcsI RAATTY 4 cut(s) 187, 277, 622, 857
AcuI CTGAAG 3 cut(s) 1034, 1167, 1819
AcyI GRCGYC 2 cut(s) 498, 1407
AdeI CACNNNGTG 1 cut(s) 257
AfaI GTAC 3 cut(s) 1106, 1365, 1718
AfeI AGCGCT 1 cut(s) 463
AfiI CCNNNNNNNGG 4 cut(s) 154, 257, 369, 386
AflIII ACRYGT 4 cut(s) 1451, 1593, 1713, 1739
AgeI ACCGGT 1 cut(s) 1852
AjnI CCWGG 2 cut(s) 340, 451
AjuI GAANNNNNNNTTGG 2 cut(s) 597, 629
Alw26I GTCTC 3 cut(s) 1398, 1520, 1540
AlwI GGATC 3 cut(s) 1123, 1132, 1148
Ama87I CYCGRG 1 cut(s) 617
Aor51HI AGCGCT 1 cut(s) 463
AoxI GGCC 8 cut(s) 145, 338, 636, 865, 1169, 1306, 1495, 1798
ApeKI GCWGC 4 cut(s) 509, 585, 1235, 1565
ApoI RAATTY 4 cut(s) 187, 277, 622, 857
AsiGI ACCGGT 1 cut(s) 1852
Asp700I GAANNNNTTC 1 cut(s) 858
AspLEI GCGC 2 cut(s) 464, 1776
AspS9I GGNCC 7 cut(s) 104, 296, 455, 601, 778, 866, 1307
AsuC2I CCSGG 1 cut(s) 1531
AsuHPI GGTGA 5 cut(s) 979, 1347, 1648, 1746, 1818
AsuII TTCGAA 1 cut(s) 39
AvaI CYCGRG 1 cut(s) 617
AvaII GGWCC 5 cut(s) 104, 296, 455, 601, 778
BalI TGGCCA 2 cut(s) 340, 1800
BanI GGYRCC 3 cut(s) 325, 448, 721
BarI GAAGNNNNNNTAC 4 cut(s) 665, 697, 1833, 1865
BbsI GAAGAC 2 cut(s) 493, 1333
BbvCI CCTCAGC 1 cut(s) 1667
BbvI GCAGC 4 cut(s) 496, 597, 1247, 1577
BccI CCATC 8 cut(s) 167, 363, 416, 563, 709, 1319, 1481, 1697
BceAI ACGGC 3 cut(s) 403, 751, 1240
BciT130I CCWGG 2 cut(s) 342, 453
BcnI CCSGG 1 cut(s) 1531
BcoDI GTCTC 3 cut(s) 1398, 1520, 1540
BfaI CTAG 1 cut(s) 459
BfoI RGCGCY 1 cut(s) 465
BisI GCNGC 7 cut(s) 510, 586, 639, 1228, 1236, 1239, 1566
BlsI GCNGC 7 cut(s) 511, 587, 640, 1229, 1237, 1240, 1567
Bme1390I CCNGG 3 cut(s) 342, 453, 1531
Bme18I GGWCC 5 cut(s) 104, 296, 455, 601, 778
BmeT110I CYCGRG 1 cut(s) 617
BmgT120I GGNCC 7 cut(s) 104, 296, 455, 601, 778, 866, 1307
BmiI GGNNCC 4 cut(s) 327, 450, 723, 779
BmrFI CCNGG 3 cut(s) 342, 453, 1531
BmsI GCATC 1 cut(s) 1629
BpiI GAAGAC 2 cut(s) 493, 1333
Bpu10I CCTNAGC 1 cut(s) 1667
Bpu14I TTCGAA 1 cut(s) 39
BpuEI CTTGAG 2 cut(s) 284, 1683
BpuMI CCSGG 1 cut(s) 1531
BsaHI GRCGYC 2 cut(s) 498, 1407
BsaI GGTCTC 2 cut(s) 1520, 1540
BsaJI CCNNGG 4 cut(s) 341, 363, 915, 1530
BsaWI WCCGGW 1 cut(s) 1852
BsaXI ACNNNNNCTCC 4 cut(s) 399, 429, 1655, 1685
Bsc4I CCNNNNNNNGG 4 cut(s) 154, 257, 369, 386
Bse118I RCCGGY 1 cut(s) 1852
Bse1I ACTGG 1 cut(s) 639
Bse3DI GCAATG 5 cut(s) 519, 686, 751, 1230, 1524
BseBI CCWGG 2 cut(s) 342, 453
BseDI CCNNGG 4 cut(s) 341, 363, 915, 1530
BseGI GGATG 1 cut(s) 374
BseLI CCNNNNNNNGG 4 cut(s) 154, 257, 369, 386
BseMI GCAATG 5 cut(s) 519, 686, 751, 1230, 1524
BseMII CTCAG 4 cut(s) 423, 1389, 1491, 1681
BseNI ACTGG 1 cut(s) 639
BseXI GCAGC 4 cut(s) 496, 597, 1247, 1577
Bsh1236I CGCG 1 cut(s) 1774
BshFI GGCC 8 cut(s) 147, 340, 638, 867, 1171, 1308, 1497, 1800
BshNI GGYRCC 3 cut(s) 325, 448, 721
BshTI ACCGGT 1 cut(s) 1852
BsiHKCI CYCGRG 1 cut(s) 617
BsiSI CCGG 2 cut(s) 1530, 1853
BslFI GGGAC 3 cut(s) 34, 359, 791
BslI CCNNNNNNNGG 4 cut(s) 154, 257, 369, 386
BsmAI GTCTC 3 cut(s) 1398, 1520, 1540
BsmBI CGTCTC 1 cut(s) 1398
BsmFI GGGAC 3 cut(s) 34, 359, 791
BsmI GAATGC 3 cut(s) 55, 1196, 1450
BsnI GGCC 8 cut(s) 147, 340, 638, 867, 1171, 1308, 1497, 1800
Bso31I GGTCTC 2 cut(s) 1520, 1540
BsoBI CYCGRG 1 cut(s) 617
Bsp119I TTCGAA 1 cut(s) 39
Bsp1407I TGTACA 1 cut(s) 1716
Bsp143I GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
Bsp19I CCATGG 1 cut(s) 915
BspACI CCGC 5 cut(s) 639, 931, 1227, 1239, 1439
BspANI GGCC 8 cut(s) 147, 340, 638, 867, 1171, 1308, 1497, 1800
BspCNI CTCAG 4 cut(s) 424, 1390, 1490, 1680
BspFNI CGCG 1 cut(s) 1774
BspHI TCATGA 2 cut(s) 1410, 1599
BspLI GGNNCC 4 cut(s) 327, 450, 723, 779
BspPI GGATC 3 cut(s) 1123, 1132, 1148
BspT104I TTCGAA 1 cut(s) 39
BspT107I GGYRCC 3 cut(s) 325, 448, 721
BspTNI GGTCTC 2 cut(s) 1520, 1540
BsrDI GCAATG 5 cut(s) 519, 686, 751, 1230, 1524
BsrFI RCCGGY 1 cut(s) 1852
BsrGI TGTACA 1 cut(s) 1716
BsrI ACTGG 1 cut(s) 639
BssAI RCCGGY 1 cut(s) 1852
BssECI CCNNGG 4 cut(s) 341, 363, 915, 1530
BssMI GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
BssNI GRCGYC 2 cut(s) 498, 1407
BssT1I CCWWGG 2 cut(s) 363, 915
Bst2UI CCWGG 2 cut(s) 342, 453
Bst4CI ACNGT 5 cut(s) 104, 845, 1032, 1039, 1490
Bst6I CTCTTC 2 cut(s) 1523, 1543
BstACI GRCGYC 2 cut(s) 498, 1407
BstAUI TGTACA 1 cut(s) 1716
BstBI TTCGAA 1 cut(s) 39
BstC8I GCNNGC 3 cut(s) 583, 1726, 1772
BstDEI CTNAG 5 cut(s) 432, 1398, 1477, 1643, 1667
BstDSI CCRYGG 1 cut(s) 915
BstF5I GGATG 1 cut(s) 374
BstFNI CGCG 1 cut(s) 1774
BstH2I RGCGCY 1 cut(s) 465
BstHHI GCGC 2 cut(s) 464, 1776
BstKTI GATC 7 cut(s) 76, 598, 972, 1078, 1118, 1140, 1156
BstMAI GTCTC 3 cut(s) 1398, 1520, 1540
BstMBI GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
BstMWI GCNNNNNNNGC 6 cut(s) 515, 638, 1051, 1445, 1503, 1782
BstNI CCWGG 2 cut(s) 342, 453
BstNSI RCATGY 4 cut(s) 1455, 1597, 1717, 1743
BstSCI CCNGG 3 cut(s) 340, 451, 1529
BstUI CGCG 1 cut(s) 1774
BstV1I GCAGC 4 cut(s) 496, 597, 1247, 1577
BstV2I GAAGAC 2 cut(s) 493, 1333
BstX2I RGATCY 1 cut(s) 1115
BstYI RGATCY 1 cut(s) 1115
BsuRI GGCC 8 cut(s) 147, 340, 638, 867, 1171, 1308, 1497, 1800
BtgI CCRYGG 1 cut(s) 915
BtsCI GGATG 1 cut(s) 374
BtsIMutI CAGTG 2 cut(s) 632, 1028
Cac8I GCNNGC 3 cut(s) 583, 1726, 1772
CciI TCATGA 2 cut(s) 1410, 1599
CfoI GCGC 2 cut(s) 464, 1776
Cfr10I RCCGGY 1 cut(s) 1852
Cfr13I GGNCC 7 cut(s) 104, 296, 455, 601, 778, 866, 1307
Csp6I GTAC 3 cut(s) 1105, 1364, 1717
CspAI ACCGGT 1 cut(s) 1852
CspCI CAANNNNNGTGG 2 cut(s) 945, 980
CviQI GTAC 3 cut(s) 1105, 1364, 1717
DdeI CTNAG 5 cut(s) 432, 1398, 1477, 1643, 1667
DpnI GATC 7 cut(s) 75, 597, 971, 1077, 1117, 1139, 1155
DpnII GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
DraIII CACNNNGTG 1 cut(s) 257
EaeI YGGCCR 3 cut(s) 338, 636, 1798
Eam1104I CTCTTC 2 cut(s) 1523, 1543
EarI CTCTTC 2 cut(s) 1523, 1543
Eco130I CCWWGG 2 cut(s) 363, 915
Eco147I AGGCCT 2 cut(s) 147, 1171
Eco31I GGTCTC 2 cut(s) 1520, 1540
Eco47I GGWCC 5 cut(s) 104, 296, 455, 601, 778
Eco47III AGCGCT 1 cut(s) 463
Eco57I CTGAAG 3 cut(s) 1034, 1167, 1819
Eco88I CYCGRG 1 cut(s) 617
EcoO109I RGGNCCY 1 cut(s) 778
EcoRII CCWGG 2 cut(s) 340, 451
EcoT14I CCWWGG 2 cut(s) 363, 915
EcoT22I ATGCAT 1 cut(s) 751
ErhI CCWWGG 2 cut(s) 363, 915
Esp3I CGTCTC 1 cut(s) 1398
FalI AAGNNNNNCTT 2 cut(s) 1009, 1041
FaqI GGGAC 3 cut(s) 34, 359, 791
FauI CCCGC 2 cut(s) 924, 1432
FauNDI CATATG 1 cut(s) 529
Fnu4HI GCNGC 7 cut(s) 510, 586, 639, 1228, 1236, 1239, 1566
FokI GGATG 1 cut(s) 381
Fsp4HI GCNGC 7 cut(s) 510, 586, 639, 1228, 1236, 1239, 1566
FspBI CTAG 1 cut(s) 459
GlaI GCGC 2 cut(s) 463, 1775
GluI GCNGC 7 cut(s) 510, 586, 639, 1228, 1236, 1239, 1566
HaeII RGCGCY 1 cut(s) 465
HaeIII GGCC 8 cut(s) 147, 340, 638, 867, 1171, 1308, 1497, 1800
HapII CCGG 2 cut(s) 1530, 1853
HhaI GCGC 2 cut(s) 464, 1776
Hin1I GRCGYC 2 cut(s) 498, 1407
Hin6I GCGC 2 cut(s) 462, 1774
HinP1I GCGC 2 cut(s) 462, 1774
HincII GTYRAC 1 cut(s) 1035
HindII GTYRAC 1 cut(s) 1035
HindIII AAGCTT 2 cut(s) 892, 1265
HpaI GTTAAC 1 cut(s) 1035
HpaII CCGG 2 cut(s) 1530, 1853
HphI GGTGA 5 cut(s) 979, 1347, 1648, 1746, 1818
Hpy166II GTNNAC 4 cut(s) 260, 679, 1035, 1355
Hpy188I TCNGA 7 cut(s) 485, 1137, 1186, 1389, 1459, 1480, 1838
Hpy188III TCNNGA 8 cut(s) 77, 107, 619, 760, 836, 1411, 1600, 1700
Hpy8I GTNNAC 4 cut(s) 260, 679, 1035, 1355
Hpy99I CGWCG 1 cut(s) 500
HpyAV CCTTC 5 cut(s) 436, 931, 1408, 1582, 1835
HpyCH4III ACNGT 5 cut(s) 104, 845, 1032, 1039, 1490
HpyCH4IV ACGT 3 cut(s) 498, 1371, 1407
HpyF10VI GCNNNNNNNGC 6 cut(s) 515, 638, 1051, 1445, 1503, 1782
HpyF3I CTNAG 5 cut(s) 432, 1398, 1477, 1643, 1667
HpySE526I ACGT 3 cut(s) 498, 1371, 1407
Hsp92I GRCGYC 2 cut(s) 498, 1407
HspAI GCGC 2 cut(s) 462, 1774
KspAI GTTAAC 1 cut(s) 1035
Kzo9I GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
LmnI GCTCC 3 cut(s) 1292, 1610, 1676
Lsp1109I GCAGC 4 cut(s) 496, 597, 1247, 1577
LweI GCATC 1 cut(s) 1629
MaeI CTAG 1 cut(s) 459
MaeII ACGT 3 cut(s) 498, 1371, 1407
MaeIII GTNAC 2 cut(s) 535, 1007
MalI GATC 7 cut(s) 75, 597, 971, 1077, 1117, 1139, 1155
MboI GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
MboII GAAGA 9 cut(s) 493, 802, 866, 1173, 1333, 1510, 1530, 1642, 1825
MfeI CAATTG 1 cut(s) 234
MflI RGATCY 1 cut(s) 1115
MlsI TGGCCA 2 cut(s) 340, 1800
MluNI TGGCCA 2 cut(s) 340, 1800
MlyI GAGTC 4 cut(s) 341, 994, 1688, 1799
MmeI TCCRAC 2 cut(s) 628, 1509
Mox20I TGGCCA 2 cut(s) 340, 1800
Mph1103I ATGCAT 1 cut(s) 751
MroXI GAANNNNTTC 1 cut(s) 858
MscI TGGCCA 2 cut(s) 340, 1800
MseI TTAA 5 cut(s) 207, 849, 1022, 1034, 1041
MslI CAYNNNNRTG 1 cut(s) 1598
Msp20I TGGCCA 2 cut(s) 340, 1800
MspA1I CMGCKG 1 cut(s) 931
MspI CCGG 2 cut(s) 1530, 1853
MspR9I CCNGG 3 cut(s) 342, 453, 1531
MunI CAATTG 1 cut(s) 234
Mva1269I GAATGC 3 cut(s) 55, 1196, 1450
MvaI CCWGG 2 cut(s) 342, 453
MvnI CGCG 1 cut(s) 1774
MwoI GCNNNNNNNGC 6 cut(s) 515, 638, 1051, 1445, 1503, 1782
NciI CCSGG 1 cut(s) 1531
NcoI CCATGG 1 cut(s) 915
NdeI CATATG 1 cut(s) 529
NdeII GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
NlaIV GGNNCC 4 cut(s) 327, 450, 723, 779
NsiI ATGCAT 1 cut(s) 751
NspI RCATGY 4 cut(s) 1455, 1597, 1717, 1743
NspV TTCGAA 1 cut(s) 39
PagI TCATGA 2 cut(s) 1410, 1599
PceI AGGCCT 2 cut(s) 147, 1171
PciI ACATGT 4 cut(s) 1451, 1593, 1713, 1739
PcsI WCGNNNNNNNCGW 1 cut(s) 1107
PctI GAATGC 3 cut(s) 55, 1196, 1450
PdmI GAANNNNTTC 1 cut(s) 858
PfeI GAWTC 7 cut(s) 376, 486, 701, 1384, 1481, 1629, 1647
PflMI CCANNNNNTGG 2 cut(s) 257, 369
PinAI ACCGGT 1 cut(s) 1852
PkrI GCNGC 7 cut(s) 511, 587, 640, 1229, 1237, 1240, 1567
PleI GAGTC 4 cut(s) 341, 994, 1688, 1798
PpsI GAGTC 4 cut(s) 341, 994, 1688, 1798
PpuMI RGGWCCY 1 cut(s) 778
PscI ACATGT 4 cut(s) 1451, 1593, 1713, 1739
PsiI TTATAA 2 cut(s) 1082, 1176
Psp5II RGGWCCY 1 cut(s) 778
Psp6I CCWGG 2 cut(s) 340, 451
PspGI CCWGG 2 cut(s) 340, 451
PspN4I GGNNCC 4 cut(s) 327, 450, 723, 779
PspPI GGNCC 7 cut(s) 104, 296, 455, 601, 778, 866, 1307
PspPPI RGGWCCY 1 cut(s) 778
PsuI RGATCY 1 cut(s) 1115
RsaI GTAC 3 cut(s) 1106, 1365, 1718
RsaNI GTAC 3 cut(s) 1105, 1364, 1717
RseI CAYNNNNRTG 1 cut(s) 1598
SaqAI TTAA 5 cut(s) 207, 849, 1022, 1034, 1041
SatI GCNGC 7 cut(s) 510, 586, 639, 1228, 1236, 1239, 1566
Sau3AI GATC 7 cut(s) 73, 595, 969, 1075, 1115, 1137, 1153
Sau96I GGNCC 7 cut(s) 104, 296, 455, 601, 778, 866, 1307
SchI GAGTC 4 cut(s) 341, 994, 1688, 1799
ScrFI CCNGG 3 cut(s) 342, 453, 1531
SfaNI GCATC 1 cut(s) 1629
SfuI TTCGAA 1 cut(s) 39
SinI GGWCC 5 cut(s) 104, 296, 455, 601, 778
SmiMI CAYNNNNRTG 1 cut(s) 1598
SmlI CTYRAG 2 cut(s) 263, 1698
SmoI CTYRAG 2 cut(s) 263, 1698
SseBI AGGCCT 2 cut(s) 147, 1171
SsiI CCGC 5 cut(s) 639, 931, 1227, 1239, 1439
SspI AATATT 3 cut(s) 83, 1314, 1848
SspMI CTAG 1 cut(s) 459
StuI AGGCCT 2 cut(s) 147, 1171
StyD4I CCNGG 3 cut(s) 340, 451, 1529
StyI CCWWGG 2 cut(s) 363, 915
TaaI ACNGT 5 cut(s) 104, 845, 1032, 1039, 1490
TaiI ACGT 3 cut(s) 501, 1374, 1410
TaqI TCGA 7 cut(s) 39, 495, 1110, 1376, 1653, 1746, 1793
TatI WGTACW 1 cut(s) 1716
TauI GCSGC 3 cut(s) 641, 1230, 1241
TfiI GAWTC 7 cut(s) 376, 486, 701, 1384, 1481, 1629, 1647
Tru1I TTAA 5 cut(s) 207, 849, 1022, 1034, 1041
Tru9I TTAA 5 cut(s) 207, 849, 1022, 1034, 1041
TscAI CASTG 2 cut(s) 639, 1035
TseI GCWGC 4 cut(s) 509, 585, 1235, 1565
TspGWI ACGGA 1 cut(s) 1115
TspRI CASTG 2 cut(s) 639, 1035
Van91I CCANNNNNTGG 2 cut(s) 257, 369
VpaK11BI GGWCC 5 cut(s) 104, 296, 455, 601, 778
XapI RAATTY 4 cut(s) 187, 277, 622, 857
XceI RCATGY 4 cut(s) 1455, 1597, 1717, 1743
XcmI CCANNNNNNNNNTGG 1 cut(s) 199
XmnI GAANNNNTTC 1 cut(s) 858
XspI CTAG 1 cut(s) 459
ZraI GACGTC 2 cut(s) 499, 1408
Zsp2I ATGCAT 1 cut(s) 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.