RLG00000010963

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
5716824 .. 5720738
3915 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010963

Sequence Viewer

Length: 2370 bp
ATGATGAAGAAGAACCATACCAACCTTCACCTTCTTATCTCTATCTTTTTCCTCTTTACTTTCTGTTCATGGGTTTCCTTAGCCCTGGCACAATCTGAAACCATTATCCCAGTGAATGTGGGGGTTGTTCTCGATGACCTTAAGTATTCACTGACCAAGGATATTTGGTTGCATTGCATGAAAATGGCTCTCGCAGGCTTCTATGCTACTCATGCTCACTACAACACTAGGCTTGTTTTGAAGACTACGCACTGCAGAGAAAGTGTTGTCAGTGCAGCTGCTGCAGATGCAGCTCTAGATCTGATAAAGAATGAACAAGTGAAAGCCATCATCGGGCCAGTGACATCCATGCAGACGAGCTTTGTCATTAATCTTGGAAACCAGGCTCATGTACCTACCATATCATTTTCTGCTACAAGCCCTTCTCTTACTTCTCTCCGGATCCCCTATTTCTTTCAATTTGCACAAACTGACTCATCCCAAGTGGAAGCCATTAGTGCAATTGTTCAAGCCTTTGGATGGAGACAAGTCGTGCCTATCTATATAGAAACTGAGTATGGGGAGGGAATCATACCATACTTAACTGACGCCTTGCATGAGGTAAATGCTCGTGTCCCATACCGAAGTGTCATTCCCTCATCAGCCACTGATGTTCAAATCGTTCAAGAACTTTCCAAGTTGATGACAATGGAAACCAGAGTCTTCATTGTCCACATGACAGCTGATCTATCCTCAAGATTATTTGTCAAGGCAAAAGAGATTGGGATGATGAGTAAAGGGTATGTATGGCTCACTACTAATGAGATACTTAATAGATTACAGTCACAAAATTCTACAGTCATTGATTCCATGCAGGGTGTATTGGGTGTACAAACTTTTGTTCCACTAACACCAGAGCTTGACGAACTCAAGATACGGTTGAAACAGCAATTCCATACAGACAATCCAGTCATTGGTGCTGAATTGGATGTTTTTGGACTTTGGGCTTATGATGCTGTTTTTGCAGTGGCCATGGCAATTGAACAAGCAATTGGAACTCCAACTGGCTTTCCCTTCCAAGAGTCAATTGTTACTTCCAACCACTCGACAGATCTTGAAGGTTTTCCGGTCTCTCCATATGGTCCAGAACTTTGCAGAGCTCTGGCAACTGCTAGATTTCAAGGCATAGCTGGGAATTTCAGTGTTGTTGGTAGGCAACGTGAGTCATCAAATTTTCGTGTAGTCAATGTTAATGGTGGTGAGGCAACAACAATTGGATTTTGGACACTGAAAGAGGGCCTAGTCAAAACATTGAACTCGTCAGCAAACTCAAGTAAACCTTCAAGTTCCAAATTTAAGTTTGGACCTATTAGGTGGCCGGGAAATTCTCCCTCTGTTCCCAAGGGTTGGGAGTTCCCAACAAATGGCAAGAAATTGAGAATTGGAGTTCCTGTTAAGCAAGATTTTACCGAGTATGTTAAGGTAACCATAAACCACAGCACTAACACAACGGATGTCACAGGCTTCAGTGTCGATGTCTTTAAGGCTGCAGTGAAACTATTACCATATGCTCTTTCTTACGAGTTCATTCCCTTTGCAAACTCTGATGGCACCAGTGCCGGCACTTACAATGAGTTGTGCTATCAACCAACAGTTATTGACATAGAGGTTCTAGTAAGGCATCGGGATAATGTAGGCTACATAAAGAATTCTTTTGTTTACGATCTCCTGAAACAAGTAGGTTTTGATGATTCTAAGCTGAAGGATTTTGAAACAATAGAAGAAATTGATGAAGCTCTTTCAAAAGGGACTGTGAATGGTGGTATTGCTGCTTTTGTTCATGGAACCCCCAAGATGAAGCTTTTTCTTGCCAAATATTGTTCTAAATATACCATGATTGGACCCATCTTTAAAACTGACGGATTTGCCTTTGTGTTTCCGAAACGTTCCCCACTTGTAGCCGATGTTTCACAGGCAATCCTAAACATGACTGGAGGACTGGAGATATTGAATCTTGAAAAGGAATGGTTCGAGAAAGAATCCAGTTGTCAAGACTCGAGTGATGCAACAGTTTCTAGCAATCGTCGTGGGCTTGGTAGCTTTTGGGTCCTGTTCCTCATTGCCGGTTTGGCTTCAGTACTTGCGATGATTATATTTGTAGCTTCCTTCATTTATAGGCATAGGTTCGTGTTAGTGCAACCAGCTGATTCAGAACCCTCAATATGGAGAAAGATCCGAGCTCTGTTCAAAATTTTCAATGAAAAAGACCTCGACTCTCACACTTTCAAAAGGAGTAATCGACAAAGAGATGCAACTTTCTCACCCGCTTTCATTCCTCCAAACATCCCTCCCAGTCAGCAGAAATCACCTTCAACAGAGCATAGTGATTGA

Protein Analysis

790

Amino Acids

87.56

Weight (kDa)

7.0

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 56 - 412 5.6e-74 Receptor family ligand binding region
Peripla_BP_6 PF13458 93 - 349 3e-15 Periplasmic binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 947
AccB1I GGYRCC 1 cut(s) 1589
AccB7I CCANNNNNTGG 3 cut(s) 953, 1386, 1403
AccIII TCCGGA 1 cut(s) 438
AciI CCGC 1 cut(s) 2304
AclI AACGTT 1 cut(s) 1924
AclWI GGATC 3 cut(s) 436, 449, 2206
AcoI YGGCCR 2 cut(s) 1008, 1355
AcsI RAATTY 7 cut(s) 829, 1174, 1210, 1331, 1363, 1687, 2229
AcuI CTGAAG 3 cut(s) 1489, 1760, 2097
AcyI GRCGYC 1 cut(s) 588
AfaI GTAC 3 cut(s) 393, 870, 2118
AfiI CCNNNNNNNGG 6 cut(s) 333, 519, 953, 1386, 1403, 2202
AflII CTTAAG 1 cut(s) 140
AjnI CCWGG 2 cut(s) 84, 381
AjuI GAANNNNNNNTTGG 2 cut(s) 1014, 1046
Alw21I GWGCWC 2 cut(s) 1141, 2221
Alw26I GTCTC 2 cut(s) 517, 1114
AlwI GGATC 3 cut(s) 436, 449, 2206
AlwNI CAGNNNCTG 2 cut(s) 281, 647
Ama87I CYCGRG 1 cut(s) 2035
Aor13HI TCCGGA 1 cut(s) 438
AoxI GGCC 4 cut(s) 335, 1008, 1276, 1355
ApeKI GCWGC 6 cut(s) 275, 278, 281, 290, 1526, 1808
ApoI RAATTY 7 cut(s) 829, 1174, 1210, 1331, 1363, 1687, 2229
AseI ATTAAT 1 cut(s) 369
Asp700I GAANNNNTTC 1 cut(s) 1101
AspS9I GGNCC 6 cut(s) 335, 1121, 1276, 1343, 1880, 2086
AsuC2I CCSGG 1 cut(s) 1359
AsuHPI GGTGA 4 cut(s) 20, 1250, 2292, 2337
AvaI CYCGRG 1 cut(s) 2035
AvaII GGWCC 4 cut(s) 1121, 1343, 1880, 2086
BalI TGGCCA 1 cut(s) 1010
BamHI GGATCC 1 cut(s) 441
BanI GGYRCC 1 cut(s) 1589
BanII GRGCYC 2 cut(s) 1141, 2221
BauI CACGAG 1 cut(s) 609
BbsI GAAGAC 2 cut(s) 248, 694
Bbv12I GWGCWC 2 cut(s) 1141, 2221
BbvI GCAGC 6 cut(s) 265, 268, 287, 302, 1513, 1795
BccI CCATC 4 cut(s) 335, 513, 1580, 1892
BciT130I CCWGG 2 cut(s) 86, 383
BcnI CCSGG 1 cut(s) 1359
BcoDI GTCTC 2 cut(s) 517, 1114
BfaI CTAG 6 cut(s) 228, 296, 1152, 1280, 1652, 2055
BfmI CTRYAG 4 cut(s) 253, 282, 834, 1527
BfrI CTTAAG 1 cut(s) 140
BglI GCCNNNNNGGC 1 cut(s) 2108
BglII AGATCT 2 cut(s) 298, 1090
BisI GCNGC 6 cut(s) 276, 279, 282, 291, 1527, 1809
BlsI GCNGC 6 cut(s) 277, 280, 283, 292, 1528, 1810
BmcAI AGTACT 1 cut(s) 2118
Bme1390I CCNGG 3 cut(s) 86, 383, 1359
Bme18I GGWCC 4 cut(s) 1121, 1343, 1880, 2086
BmeT110I CYCGRG 1 cut(s) 2035
BmgT120I GGNCC 6 cut(s) 335, 1121, 1276, 1343, 1880, 2086
BmiI GGNNCC 5 cut(s) 443, 1591, 1825, 1882, 2087
BmrFI CCNGG 3 cut(s) 86, 383, 1359
BmrI ACTGGG 2 cut(s) 104, 2325
BmsI GCATC 5 cut(s) 277, 982, 1669, 2032, 2278
BmuI ACTGGG 2 cut(s) 104, 2325
BpiI GAAGAC 2 cut(s) 248, 694
BpmI CTGGAG 2 cut(s) 1992, 2000
Bpu10I CCTNAGC 1 cut(s) 79
BpuEI CTTGAG 3 cut(s) 718, 893, 1294
BpuMI CCSGG 1 cut(s) 1359
BsaHI GRCGYC 1 cut(s) 588
BsaI GGTCTC 1 cut(s) 1114
BsaJI CCNNGG 4 cut(s) 84, 156, 1011, 1380
BsaWI WCCGGW 2 cut(s) 438, 1105
BsaXI ACNNNNNCTCC 2 cut(s) 1416, 1446
Bsc4I CCNNNNNNNGG 6 cut(s) 333, 519, 953, 1386, 1403, 2202
Bse118I RCCGGY 2 cut(s) 1598, 2102
Bse1I ACTGG 9 cut(s) 110, 338, 947, 1048, 1593, 1975, 1983, 2022, 2331
Bse3DI GCAATG 2 cut(s) 172, 2097
BseAI TCCGGA 1 cut(s) 438
BseBI CCWGG 2 cut(s) 86, 383
BseDI CCNNGG 4 cut(s) 84, 156, 1011, 1380
BseGI GGATG 7 cut(s) 344, 476, 524, 771, 973, 1498, 2322
BseLI CCNNNNNNNGG 6 cut(s) 333, 519, 953, 1386, 1403, 2202
BseMI GCAATG 2 cut(s) 172, 2097
BseMII CTCAG 1 cut(s) 543
BseNI ACTGG 9 cut(s) 110, 338, 947, 1048, 1593, 1975, 1983, 2022, 2331
BseXI GCAGC 6 cut(s) 265, 268, 287, 302, 1513, 1795
BseYI CCCAGC 1 cut(s) 1169
BsgI GTGCAG 1 cut(s) 294
BshFI GGCC 4 cut(s) 337, 1010, 1278, 1357
BshNI GGYRCC 1 cut(s) 1589
BsiHKAI GWGCWC 2 cut(s) 1141, 2221
BsiHKCI CYCGRG 1 cut(s) 2035
BsiSI CCGG 5 cut(s) 439, 1106, 1358, 1599, 2103
BslFI GGGAC 2 cut(s) 599, 1801
BslI CCNNNNNNNGG 6 cut(s) 333, 519, 953, 1386, 1403, 2202
BsmAI GTCTC 2 cut(s) 517, 1114
BsmFI GGGAC 2 cut(s) 599, 1801
BsnI GGCC 4 cut(s) 337, 1010, 1278, 1357
Bso31I GGTCTC 1 cut(s) 1114
BsoBI CYCGRG 1 cut(s) 2035
Bsp1286I GDGCHC 2 cut(s) 1141, 2221
Bsp13I TCCGGA 1 cut(s) 438
Bsp1407I TGTACA 1 cut(s) 868
Bsp143I GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
Bsp19I CCATGG 1 cut(s) 1011
BspACI CCGC 1 cut(s) 2304
BspANI GGCC 4 cut(s) 337, 1010, 1278, 1357
BspCNI CTCAG 1 cut(s) 544
BspEI TCCGGA 1 cut(s) 438
BspLI GGNNCC 5 cut(s) 443, 1591, 1825, 1882, 2087
BspMAI CTGCAG 3 cut(s) 257, 286, 1531
BspPI GGATC 3 cut(s) 436, 449, 2206
BspT107I GGYRCC 1 cut(s) 1589
BspTI CTTAAG 1 cut(s) 140
BspTNI GGTCTC 1 cut(s) 1114
BsrDI GCAATG 2 cut(s) 172, 2097
BsrFI RCCGGY 2 cut(s) 1598, 2102
BsrGI TGTACA 1 cut(s) 868
BsrI ACTGG 9 cut(s) 110, 338, 947, 1048, 1593, 1975, 1983, 2022, 2331
BssAI RCCGGY 2 cut(s) 1598, 2102
BssECI CCNNGG 4 cut(s) 84, 156, 1011, 1380
BssMI GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
BssNI GRCGYC 1 cut(s) 588
BssSI CACGAG 1 cut(s) 609
BssT1I CCWWGG 3 cut(s) 156, 1011, 1380
Bst2BI CACGAG 1 cut(s) 609
Bst2UI CCWGG 2 cut(s) 86, 383
Bst4CI ACNGT 6 cut(s) 822, 838, 918, 1633, 1792, 2050
BstACI GRCGYC 1 cut(s) 588
BstAFI CTTAAG 1 cut(s) 140
BstAPI GCANNNNNTGC 1 cut(s) 281
BstAUI TGTACA 1 cut(s) 868
BstC8I GCNNGC 2 cut(s) 196, 1600
BstDEI CTNAG 3 cut(s) 79, 552, 1734
BstDSI CCRYGG 1 cut(s) 1011
BstEII GGTNACC 1 cut(s) 1462
BstF5I GGATG 7 cut(s) 344, 476, 524, 771, 973, 1498, 2322
BstKTI GATC 6 cut(s) 301, 444, 727, 1093, 1705, 2214
BstMAI GTCTC 2 cut(s) 517, 1114
BstMBI GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
BstMWI GCNNNNNNNGC 8 cut(s) 212, 281, 287, 290, 497, 992, 1001, 2108
BstNI CCWGG 2 cut(s) 86, 383
BstPI GGTNACC 1 cut(s) 1462
BstSCI CCNGG 3 cut(s) 84, 381, 1357
BstSFI CTRYAG 4 cut(s) 253, 282, 834, 1527
BstV1I GCAGC 6 cut(s) 265, 268, 287, 302, 1513, 1795
BstV2I GAAGAC 2 cut(s) 248, 694
BstX2I RGATCY 4 cut(s) 298, 441, 1090, 2211
BstYI RGATCY 4 cut(s) 298, 441, 1090, 2211
BsuRI GGCC 4 cut(s) 337, 1010, 1278, 1357
BtgI CCRYGG 1 cut(s) 1011
BtgZI GCGATG 1 cut(s) 2138
BtsCI GGATG 7 cut(s) 344, 476, 524, 771, 973, 1498, 2322
BtsI GCAGTG 3 cut(s) 250, 1011, 1536
Cac8I GCNNGC 2 cut(s) 196, 1600
CaiI CAGNNNCTG 2 cut(s) 281, 647
Cfr10I RCCGGY 2 cut(s) 1598, 2102
Cfr13I GGNCC 6 cut(s) 335, 1121, 1276, 1343, 1880, 2086
CseI GACGC 1 cut(s) 596
Csp6I GTAC 3 cut(s) 392, 869, 2117
CspCI CAANNNNNGTGG 2 cut(s) 2047, 2082
CviQI GTAC 3 cut(s) 392, 869, 2117
DdeI CTNAG 3 cut(s) 79, 552, 1734
DpnI GATC 6 cut(s) 300, 443, 726, 1092, 1704, 2213
DpnII GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
DraI TTTAAA 1 cut(s) 1891
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 2 cut(s) 1008, 1355
Ecl136II GAGCTC 2 cut(s) 1139, 2219
Eco130I CCWWGG 3 cut(s) 156, 1011, 1380
Eco24I GRGCYC 2 cut(s) 1141, 2221
Eco31I GGTCTC 1 cut(s) 1114
Eco47I GGWCC 4 cut(s) 1121, 1343, 1880, 2086
Eco53kI GAGCTC 2 cut(s) 1139, 2219
Eco57I CTGAAG 3 cut(s) 1489, 1760, 2097
Eco88I CYCGRG 1 cut(s) 2035
Eco91I GGTNACC 1 cut(s) 1462
EcoICRI GAGCTC 2 cut(s) 1139, 2219
EcoO109I RGGNCCY 2 cut(s) 1276, 2086
EcoO65I GGTNACC 1 cut(s) 1462
EcoRI GAATTC 1 cut(s) 1687
EcoRII CCWGG 2 cut(s) 84, 381
EcoT14I CCWWGG 3 cut(s) 156, 1011, 1380
EcoT38I GRGCYC 2 cut(s) 1141, 2221
ErhI CCWWGG 3 cut(s) 156, 1011, 1380
FalI AAGNNNNNCTT 2 cut(s) 1303, 1335
FaqI GGGAC 2 cut(s) 599, 1801
FauI CCCGC 1 cut(s) 2311
FauNDI CATATG 2 cut(s) 1117, 1546
Fnu4HI GCNGC 6 cut(s) 276, 279, 282, 291, 1527, 1809
FokI GGATG 7 cut(s) 331, 463, 531, 778, 980, 1505, 2309
FriOI GRGCYC 2 cut(s) 1141, 2221
Fsp4HI GCNGC 6 cut(s) 276, 279, 282, 291, 1527, 1809
FspBI CTAG 6 cut(s) 228, 296, 1152, 1280, 1652, 2055
GluI GCNGC 6 cut(s) 276, 279, 282, 291, 1527, 1809
GsaI CCCAGC 1 cut(s) 1173
GsuI CTGGAG 2 cut(s) 1992, 2000
HaeIII GGCC 4 cut(s) 337, 1010, 1278, 1357
HapII CCGG 5 cut(s) 439, 1106, 1358, 1599, 2103
HgaI GACGC 1 cut(s) 596
Hin1I GRCGYC 1 cut(s) 588
HindIII AAGCTT 1 cut(s) 1838
HpaII CCGG 5 cut(s) 439, 1106, 1358, 1599, 2103
HphI GGTGA 4 cut(s) 20, 1250, 2292, 2337
Hpy166II GTNNAC 4 cut(s) 712, 869, 1316, 1699
Hpy188I TCNGA 6 cut(s) 97, 303, 1585, 1920, 2191, 2216
Hpy8I GTNNAC 4 cut(s) 712, 869, 1316, 1699
Hpy99I CGWCG 1 cut(s) 2067
HpyAV CCTTC 9 cut(s) 35, 41, 432, 1063, 1091, 1329, 1735, 2155, 2358
HpyCH4III ACNGT 6 cut(s) 822, 838, 918, 1633, 1792, 2050
HpyCH4IV ACGT 2 cut(s) 1198, 1924
HpyF10VI GCNNNNNNNGC 8 cut(s) 212, 281, 287, 290, 497, 992, 1001, 2108
HpyF3I CTNAG 3 cut(s) 79, 552, 1734
HpySE526I ACGT 2 cut(s) 1198, 1924
Hsp92I GRCGYC 1 cut(s) 588
Kpn2I TCCGGA 1 cut(s) 438
KroI GCCGGC 1 cut(s) 1598
KroNI GCCGGC 1 cut(s) 1600
Kzo9I GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
Lsp1109I GCAGC 6 cut(s) 265, 268, 287, 302, 1513, 1795
LweI GCATC 5 cut(s) 277, 982, 1669, 2032, 2278
MaeI CTAG 6 cut(s) 228, 296, 1152, 1280, 1652, 2055
MaeII ACGT 2 cut(s) 1198, 1924
MaeIII GTNAC 5 cut(s) 340, 822, 1069, 1462, 1495
MalI GATC 6 cut(s) 300, 443, 726, 1092, 1704, 2213
MboI GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
MboII GAAGA 5 cut(s) 19, 22, 253, 694, 1772
MfeI CAATTG 5 cut(s) 501, 1017, 1029, 1065, 1251
MflI RGATCY 4 cut(s) 298, 441, 1090, 2211
MhlI GDGCHC 2 cut(s) 1141, 2221
MlsI TGGCCA 1 cut(s) 1010
MluNI TGGCCA 1 cut(s) 1010
MlyI GAGTC 6 cut(s) 467, 708, 1070, 1211, 2027, 2246
MmeI TCCRAC 2 cut(s) 1064, 1101
Mox20I TGGCCA 1 cut(s) 1010
MroI TCCGGA 1 cut(s) 438
MroNI GCCGGC 1 cut(s) 1598
MroXI GAANNNNTTC 1 cut(s) 1101
MscI TGGCCA 1 cut(s) 1010
MslI CAYNNNNRTG 1 cut(s) 182
Msp20I TGGCCA 1 cut(s) 1010
MspA1I CMGCKG 3 cut(s) 278, 722, 2183
MspCI CTTAAG 1 cut(s) 140
MspI CCGG 5 cut(s) 439, 1106, 1358, 1599, 2103
MspR9I CCNGG 3 cut(s) 86, 383, 1359
MunI CAATTG 5 cut(s) 501, 1017, 1029, 1065, 1251
MvaI CCWGG 2 cut(s) 86, 383
MwoI GCNNNNNNNGC 8 cut(s) 212, 281, 287, 290, 497, 992, 1001, 2108
NaeI GCCGGC 1 cut(s) 1600
NciI CCSGG 1 cut(s) 1359
NcoI CCATGG 1 cut(s) 1011
NdeI CATATG 2 cut(s) 1117, 1546
NdeII GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
NgoMIV GCCGGC 1 cut(s) 1598
NlaIV GGNNCC 5 cut(s) 443, 1591, 1825, 1882, 2087
NmuCI GTSAC 3 cut(s) 340, 822, 1495
PaeR7I CTCGAG 1 cut(s) 2035
PdiI GCCGGC 1 cut(s) 1600
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 6 cut(s) 567, 845, 1730, 1990, 2018, 2186
PflMI CCANNNNNTGG 3 cut(s) 953, 1386, 1403
PkrI GCNGC 6 cut(s) 277, 280, 283, 292, 1528, 1810
PleI GAGTC 6 cut(s) 467, 707, 1069, 1210, 2027, 2246
PpsI GAGTC 6 cut(s) 467, 707, 1069, 1210, 2027, 2246
PpuMI RGGWCCY 1 cut(s) 2086
PshBI ATTAAT 1 cut(s) 369
Psp124BI GAGCTC 2 cut(s) 1141, 2221
Psp1406I AACGTT 1 cut(s) 1924
Psp5II RGGWCCY 1 cut(s) 2086
Psp6I CCWGG 2 cut(s) 84, 381
PspEI GGTNACC 1 cut(s) 1462
PspFI CCCAGC 1 cut(s) 1169
PspGI CCWGG 2 cut(s) 84, 381
PspN4I GGNNCC 5 cut(s) 443, 1591, 1825, 1882, 2087
PspPI GGNCC 6 cut(s) 335, 1121, 1276, 1343, 1880, 2086
PspPPI RGGWCCY 1 cut(s) 2086
PspXI VCTCGAGB 1 cut(s) 2035
PsrI GAACNNNNNNTAC 2 cut(s) 897, 929
PstI CTGCAG 3 cut(s) 257, 286, 1531
PstNI CAGNNNCTG 2 cut(s) 281, 647
PsuI RGATCY 4 cut(s) 298, 441, 1090, 2211
PvuII CAGCTG 3 cut(s) 278, 722, 2183
RsaI GTAC 3 cut(s) 393, 870, 2118
RsaNI GTAC 3 cut(s) 392, 869, 2117
RseI CAYNNNNRTG 1 cut(s) 182
SacI GAGCTC 2 cut(s) 1141, 2221
SatI GCNGC 6 cut(s) 276, 279, 282, 291, 1527, 1809
Sau3AI GATC 6 cut(s) 298, 441, 724, 1090, 1702, 2211
Sau96I GGNCC 6 cut(s) 335, 1121, 1276, 1343, 1880, 2086
ScaI AGTACT 1 cut(s) 2118
SchI GAGTC 6 cut(s) 467, 708, 1070, 1211, 2027, 2246
ScrFI CCNGG 3 cut(s) 86, 383, 1359
SduI GDGCHC 2 cut(s) 1141, 2221
SfaNI GCATC 5 cut(s) 277, 982, 1669, 2032, 2278
SfcI CTRYAG 4 cut(s) 253, 282, 834, 1527
Sfr274I CTCGAG 1 cut(s) 2035
SinI GGWCC 4 cut(s) 1121, 1343, 1880, 2086
SlaI CTCGAG 1 cut(s) 2035
SmiMI CAYNNNNRTG 1 cut(s) 182
SmlI CTYRAG 5 cut(s) 140, 733, 908, 1309, 2035
SmoI CTYRAG 5 cut(s) 140, 733, 908, 1309, 2035
SsiI CCGC 1 cut(s) 2304
SspI AATATT 1 cut(s) 1856
SspMI CTAG 6 cut(s) 228, 296, 1152, 1280, 1652, 2055
SstI GAGCTC 2 cut(s) 1141, 2221
StyD4I CCNGG 3 cut(s) 84, 381, 1357
StyI CCWWGG 3 cut(s) 156, 1011, 1380
TaaI ACNGT 6 cut(s) 822, 838, 918, 1633, 1792, 2050
TaiI ACGT 2 cut(s) 1201, 1927
TaqI TCGA 7 cut(s) 132, 1085, 1512, 2010, 2036, 2250, 2278
TatI WGTACW 2 cut(s) 868, 2116
TfiI GAWTC 6 cut(s) 567, 845, 1730, 1990, 2018, 2186
TseFI GTSAC 3 cut(s) 340, 822, 1495
TseI GCWGC 6 cut(s) 275, 278, 281, 290, 1526, 1808
Tsp45I GTSAC 3 cut(s) 340, 822, 1495
TspGWI ACGGA 2 cut(s) 1505, 1914
Van91I CCANNNNNTGG 3 cut(s) 953, 1386, 1403
Vha464I CTTAAG 1 cut(s) 140
VpaK11BI GGWCC 4 cut(s) 1121, 1343, 1880, 2086
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 7 cut(s) 829, 1174, 1210, 1331, 1363, 1687, 2229
XbaI TCTAGA 1 cut(s) 295
XhoI CTCGAG 1 cut(s) 2035
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 6 cut(s) 228, 296, 1152, 1280, 1652, 2055
ZrmI AGTACT 1 cut(s) 2118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.