RchiOBHm_Chr5g0039811

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
34511678 .. 34513187
1510 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31837

Sequence Viewer

Length: 1209 bp
ATGCCATATACGGAGTCTGGTGTAGTGATGGTTGTGCCAATCATAGACAGCAGAACCAAAAATGCATGGGTTTTTTTGCATCCTTTAACATGGGACCTTTGGATGACTACTTTGGGTTTTTTCATCTTTATTGGTTTTGTGATTTGGGTGCTTGAACCCCGAATTAATGAAGATTTCCGTGGTCCTCCTTCACATCAAGTTGGCAAAAGCAGAGTGGTGAGCAACCTCGGAAGATTTGTGATGATTATTTGGGTATTTGTTGTGCTGATAGTGGCACAATGCTTCACTGCTAATCTAGCGTCACTATTAAATGTCCAACAACTCCGACCAGCTGTCAATGATATAAATGATCTTCGAAGGAATGGTGATAACGTGGGCTACATGAGGGGTGCTTTTGTTTATGATCTCTTAAGAGAAGTAAAGTTTGATGATGCCAAGCTCAAGGCTTATGGATCTATGGAAGAAATAGATGACGCTCTTTCAAAAGGAAGTGCAAATGGTGGTATTGCTGCAATTGTTCATGAAAACCCCTACATGAAGCTACTCATTGCAAAATATTGTTCCAAGTATACTATGATTGGACCAATATTTAAAACCGATGGCTTTGGCTTCGCATTTCCAAAAAATTCCCCTCTTGTATCTGACATTACACAAGCAATCCTAAATTTGACGGATGATGGATTGATGACAAAGATTGAAGATAAATGGATCAAGAAAGATAGTAACTGTAAAGACTCTAATGGGAATTTTTCTAGCAGTGCTCTTGGTCTTGAGAGCTTTTGGGGCCTTTTTTTAATTGCAGGGATAACGTCAATATTTGCTCTAATCATATTAGTAACTTCCTTCTTGTACGAGCATAAGCATGTCTTGATGCACCCTGATTCAGGCACCTCTAAGTCAAAAAGGATCAGAACCATGTTTGAGATCTTCAACAAAAAAAAACTCAGCTCTCATACATTTAGAAGCAGCCAACATTCAGACAGTGGTGTTAGTGCTCAAGATCATGAAGTGAAAGTATCACCAAATAACAACTCGCCAGAAAGTCCACAGAGCTATACCAACCACACCGATGCGACTTCTGTATTTTCTCAGGAACAAGAAACACCGTCTCATGGTCAAGCATCTCCGGAAACCATTCCAACTATTGAGTTTGCCATCACTATTCAAGAAACCCATGAAACTCTTGATACAACTCGATCAAGAGCATAA

Protein Analysis

402

Amino Acids

44.97

Weight (kDa)

6.31

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lig_chan PF00060 30 - 269 1.8e-24 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 887
AccI GTMKAC 1 cut(s) 569
AccIII TCCGGA 1 cut(s) 1126
AclWI GGATC 3 cut(s) 460, 716, 914
AcsI RAATTY 3 cut(s) 625, 664, 745
AfaI GTAC 1 cut(s) 851
AfiI CCNNNNNNNGG 2 cut(s) 884, 1112
AflII CTTAAG 1 cut(s) 409
AgsI TTSAA 5 cut(s) 155, 483, 698, 931, 1166
AhdI GACNNNNNGTC 1 cut(s) 332
AluBI AGCT 6 cut(s) 332, 439, 541, 777, 948, 1053
AluI AGCT 6 cut(s) 332, 439, 541, 777, 948, 1053
Alw21I GWGCWC 2 cut(s) 763, 997
Alw26I GTCTC 1 cut(s) 1113
AlwI GGATC 3 cut(s) 460, 716, 914
Aor13HI TCCGGA 1 cut(s) 1126
AoxI GGCC 1 cut(s) 784
ApeKI GCWGC 2 cut(s) 509, 966
ApoI RAATTY 3 cut(s) 625, 664, 745
AseI ATTAAT 1 cut(s) 165
Asp700I GAANNNNTTC 1 cut(s) 1134
AspS9I GGNCC 4 cut(s) 94, 182, 581, 784
AsuHPI GGTGA 3 cut(s) 229, 377, 1011
AsuII TTCGAA 1 cut(s) 355
AvaII GGWCC 3 cut(s) 94, 182, 581
BanI GGYRCC 1 cut(s) 887
Bbv12I GWGCWC 2 cut(s) 763, 997
BbvI GCAGC 2 cut(s) 496, 978
BccI CCATC 4 cut(s) 22, 593, 671, 1163
BcoDI GTCTC 1 cut(s) 1113
BfaI CTAG 2 cut(s) 296, 753
BfrI CTTAAG 1 cut(s) 409
BglII AGATCT 1 cut(s) 924
BisI GCNGC 2 cut(s) 510, 967
BlsI GCNGC 2 cut(s) 511, 968
Bme18I GGWCC 3 cut(s) 94, 182, 581
BmeRI GACNNNNNGTC 1 cut(s) 332
BmgT120I GGNCC 4 cut(s) 94, 182, 581, 784
BmiI GGNNCC 3 cut(s) 95, 785, 889
BmsI GCATC 5 cut(s) 88, 421, 861, 1060, 1130
Bpu14I TTCGAA 1 cut(s) 355
BpuEI CTTGAG 3 cut(s) 425, 791, 981
BsaJI CCNNGG 2 cut(s) 178, 226
BsaWI WCCGGW 1 cut(s) 1126
Bsc4I CCNNNNNNNGG 2 cut(s) 884, 1112
Bse3DI GCAATG 1 cut(s) 546
BseAI TCCGGA 1 cut(s) 1126
BseDI CCNNGG 2 cut(s) 178, 226
BseGI GGATG 3 cut(s) 79, 108, 679
BseLI CCNNNNNNNGG 2 cut(s) 884, 1112
BseMI GCAATG 1 cut(s) 546
BseMII CTCAG 2 cut(s) 958, 1103
BseXI GCAGC 2 cut(s) 496, 978
BshFI GGCC 1 cut(s) 786
BshNI GGYRCC 1 cut(s) 887
BsiHKAI GWGCWC 2 cut(s) 763, 997
BsiSI CCGG 1 cut(s) 1127
BslFI GGGAC 1 cut(s) 107
BslI CCNNNNNNNGG 2 cut(s) 884, 1112
BsmAI GTCTC 1 cut(s) 1113
BsmBI CGTCTC 1 cut(s) 1113
BsmFI GGGAC 1 cut(s) 107
BsnI GGCC 1 cut(s) 786
Bsp119I TTCGAA 1 cut(s) 355
Bsp1286I GDGCHC 2 cut(s) 763, 997
Bsp13I TCCGGA 1 cut(s) 1126
Bsp143I GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
BspANI GGCC 1 cut(s) 786
BspCNI CTCAG 2 cut(s) 957, 1102
BspEI TCCGGA 1 cut(s) 1126
BspHI TCATGA 2 cut(s) 520, 1003
BspLI GGNNCC 3 cut(s) 95, 785, 889
BspPI GGATC 3 cut(s) 460, 716, 914
BspT104I TTCGAA 1 cut(s) 355
BspT107I GGYRCC 1 cut(s) 887
BspTI CTTAAG 1 cut(s) 409
BsrDI GCAATG 1 cut(s) 546
BssECI CCNNGG 2 cut(s) 178, 226
BssMI GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
BssNAI GTATAC 1 cut(s) 570
Bst1107I GTATAC 1 cut(s) 570
Bst4CI ACNGT 3 cut(s) 728, 983, 1107
BstAFI CTTAAG 1 cut(s) 409
BstBI TTCGAA 1 cut(s) 355
BstDEI CTNAG 3 cut(s) 894, 944, 1089
BstDSI CCRYGG 1 cut(s) 178
BstENI CCTNNNNNAGG 1 cut(s) 882
BstF5I GGATG 3 cut(s) 79, 108, 679
BstKTI GATC 8 cut(s) 352, 406, 455, 711, 909, 927, 1003, 1199
BstMAI GTCTC 1 cut(s) 1113
BstMBI GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
BstMWI GCNNNNNNNGC 2 cut(s) 296, 783
BstNSI RCATGY 1 cut(s) 866
BstV1I GCAGC 2 cut(s) 496, 978
BstX2I RGATCY 2 cut(s) 452, 924
BstYI RGATCY 2 cut(s) 452, 924
BstZ17I GTATAC 1 cut(s) 570
BsuRI GGCC 1 cut(s) 786
BtgI CCRYGG 1 cut(s) 178
BtsCI GGATG 3 cut(s) 79, 108, 679
BtsI GCAGTG 2 cut(s) 285, 763
BtsIMutI CAGTG 3 cut(s) 285, 763, 988
CciI TCATGA 2 cut(s) 520, 1003
Cfr13I GGNCC 4 cut(s) 94, 182, 581, 784
CseI GACGC 2 cut(s) 288, 482
Csp6I GTAC 1 cut(s) 850
CviQI GTAC 1 cut(s) 850
DdeI CTNAG 3 cut(s) 894, 944, 1089
DpnI GATC 8 cut(s) 351, 405, 454, 710, 908, 926, 1002, 1198
DpnII GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
DraI TTTAAA 1 cut(s) 592
DriI GACNNNNNGTC 1 cut(s) 332
Eam1105I GACNNNNNGTC 1 cut(s) 332
Eco47I GGWCC 3 cut(s) 94, 182, 581
EcoNI CCTNNNNNAGG 1 cut(s) 882
EcoO109I RGGNCCY 2 cut(s) 94, 784
EcoT22I ATGCAT 1 cut(s) 67
Esp3I CGTCTC 1 cut(s) 1113
FalI AAGNNNNNCTT 2 cut(s) 851, 883
FaqI GGGAC 1 cut(s) 107
FblI GTMKAC 1 cut(s) 569
Fnu4HI GCNGC 2 cut(s) 510, 967
FokI GGATG 3 cut(s) 66, 115, 686
Fsp4HI GCNGC 2 cut(s) 510, 967
FspBI CTAG 2 cut(s) 296, 753
GluI GCNGC 2 cut(s) 510, 967
HaeIII GGCC 1 cut(s) 786
HapII CCGG 1 cut(s) 1127
HgaI GACGC 2 cut(s) 288, 482
HinfI GANTC 3 cut(s) 14, 734, 881
HpaII CCGG 1 cut(s) 1127
HphI GGTGA 3 cut(s) 229, 377, 1011
Hpy166II GTNNAC 2 cut(s) 570, 1046
Hpy188I TCNGA 5 cut(s) 230, 326, 643, 911, 979
Hpy8I GTNNAC 2 cut(s) 570, 1046
HpyAV CCTTC 3 cut(s) 198, 351, 853
HpyCH4III ACNGT 3 cut(s) 728, 983, 1107
HpyCH4IV ACGT 2 cut(s) 372, 809
HpyCH4V TGCA 7 cut(s) 65, 79, 494, 512, 551, 800, 874
HpyF10VI GCNNNNNNNGC 2 cut(s) 296, 783
HpyF3I CTNAG 3 cut(s) 894, 944, 1089
HpySE526I ACGT 2 cut(s) 372, 809
Kpn2I TCCGGA 1 cut(s) 1126
Kzo9I GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
LpnPI CCDG 8 cut(s) 3, 342, 786, 870, 891, 1050, 1076, 1140
Lsp1109I GCAGC 2 cut(s) 496, 978
LweI GCATC 5 cut(s) 88, 421, 861, 1060, 1130
MaeI CTAG 2 cut(s) 296, 753
MaeII ACGT 2 cut(s) 372, 809
MaeIII GTNAC 3 cut(s) 300, 722, 835
MalI GATC 8 cut(s) 351, 405, 454, 710, 908, 926, 1002, 1198
MboI GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
MboII GAAGA 6 cut(s) 182, 243, 344, 473, 710, 919
MfeI CAATTG 1 cut(s) 513
MflI RGATCY 2 cut(s) 452, 924
MhlI GDGCHC 2 cut(s) 763, 997
MluCI AATT 6 cut(s) 162, 513, 625, 664, 745, 795
MlyI GAGTC 2 cut(s) 23, 728
MmeI TCCRAC 3 cut(s) 340, 349, 1163
MnlI CCTC 5 cut(s) 195, 236, 378, 642, 901
Mph1103I ATGCAT 1 cut(s) 67
MroI TCCGGA 1 cut(s) 1126
MroXI GAANNNNTTC 1 cut(s) 1134
MseI TTAA 6 cut(s) 86, 165, 308, 410, 591, 794
MslI CAYNNNNRTG 2 cut(s) 861, 1068
MspA1I CMGCKG 1 cut(s) 332
MspCI CTTAAG 1 cut(s) 409
MspI CCGG 1 cut(s) 1127
MunI CAATTG 1 cut(s) 513
MwoI GCNNNNNNNGC 2 cut(s) 296, 783
NdeII GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
NlaIV GGNNCC 3 cut(s) 95, 785, 889
NmuCI GTSAC 1 cut(s) 300
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 1 cut(s) 866
NspV TTCGAA 1 cut(s) 355
PagI TCATGA 2 cut(s) 520, 1003
PdmI GAANNNNTTC 1 cut(s) 1134
PfeI GAWTC 1 cut(s) 881
PkrI GCNGC 2 cut(s) 511, 968
PleI GAGTC 2 cut(s) 22, 728
PpsI GAGTC 2 cut(s) 22, 728
PpuMI RGGWCCY 1 cut(s) 94
PshBI ATTAAT 1 cut(s) 165
Psp5II RGGWCCY 1 cut(s) 94
PspN4I GGNNCC 3 cut(s) 95, 785, 889
PspPI GGNCC 4 cut(s) 94, 182, 581, 784
PspPPI RGGWCCY 1 cut(s) 94
PsuI RGATCY 2 cut(s) 452, 924
PvuII CAGCTG 1 cut(s) 332
RsaI GTAC 1 cut(s) 851
RsaNI GTAC 1 cut(s) 850
RseI CAYNNNNRTG 2 cut(s) 861, 1068
SaqAI TTAA 6 cut(s) 86, 165, 308, 410, 591, 794
SatI GCNGC 2 cut(s) 510, 967
Sau3AI GATC 8 cut(s) 349, 403, 452, 708, 906, 924, 1000, 1196
Sau96I GGNCC 4 cut(s) 94, 182, 581, 784
SchI GAGTC 2 cut(s) 23, 728
SduI GDGCHC 2 cut(s) 763, 997
SfaNI GCATC 5 cut(s) 88, 421, 861, 1060, 1130
SfuI TTCGAA 1 cut(s) 355
SinI GGWCC 3 cut(s) 94, 182, 581
SmiMI CAYNNNNRTG 2 cut(s) 861, 1068
SmlI CTYRAG 4 cut(s) 409, 440, 770, 996
SmoI CTYRAG 4 cut(s) 409, 440, 770, 996
Sse9I AATT 6 cut(s) 162, 513, 625, 664, 745, 795
SspI AATATT 3 cut(s) 557, 588, 816
SspMI CTAG 2 cut(s) 296, 753
TaaI ACNGT 3 cut(s) 728, 983, 1107
TaiI ACGT 2 cut(s) 375, 812
TaqI TCGA 2 cut(s) 355, 1195
TasI AATT 6 cut(s) 162, 513, 625, 664, 745, 795
TfiI GAWTC 1 cut(s) 881
Tru1I TTAA 6 cut(s) 86, 165, 308, 410, 591, 794
Tru9I TTAA 6 cut(s) 86, 165, 308, 410, 591, 794
TscAI CASTG 3 cut(s) 292, 763, 988
TseFI GTSAC 1 cut(s) 300
TseI GCWGC 2 cut(s) 509, 966
Tsp45I GTSAC 1 cut(s) 300
TspDTI ATGAA 7 cut(s) 112, 183, 509, 537, 551, 1020, 1191
TspGWI ACGGA 3 cut(s) 26, 167, 686
TspRI CASTG 3 cut(s) 292, 763, 988
Vha464I CTTAAG 1 cut(s) 409
VpaK11BI GGWCC 3 cut(s) 94, 182, 581
VspI ATTAAT 1 cut(s) 165
XagI CCTNNNNNAGG 1 cut(s) 882
XapI RAATTY 3 cut(s) 625, 664, 745
XceI RCATGY 1 cut(s) 866
XmiI GTMKAC 1 cut(s) 569
XmnI GAANNNNTTC 1 cut(s) 1134
XspI CTAG 2 cut(s) 296, 753
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.