Rroxscaffold_7G00198510

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000051
Physical Location & Seq
Reverse (-)
44044299 .. 44045387
1089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198510.1

Sequence Viewer

Length: 1089 bp
ATGCAAGCCAACTTTCTAATTGATCTTGGAGACAAAGCTCAGGTTCCCTTAATCTCATTTTTGGCAACAAGTCCTTCCCTTAGTTCCAAAGGAAGTCCATATTTTTTTCGAGCAACAGAAATTGATTCCTCTCAAGTAAGAGCCATAAGTGATATCATCAAAAGTTTTGGATGGAGAGAAGCTGTGCCAATCTATGTAGATAATCAGTTTGGAGAGGGAGTATTACCTTACTTGGTTGATGCCTTGCAACAAGTCAAGGCTCGTGTCCCTTACCGAAGTGTCATACCCCCCATGGCCACTGATGACCAACTTGTTGCAGAGCTTTACAAATTGATGACAATGCAAACTCGAGTCTTCATTGTCCACATGTCTTATGATCTTGGTTCTCGAGTTTTTGGCAAAGCACAAGAGCTAGGAATGATGAATGAAGGCTATGTTTGGATCATGACTGATGGATTAACCAATTATTTAAGTACATTGAATGATTCAGTCATGAATTCCATGGAAGGCGCATTAGGAGTGAGGCCTTATGTGCCAAGAACAAAAGAACTCATCGACTTTCGAGTACGATGGAGAAGGAAATTCCAACAGGAAAATCCAGCCATTGATACTGCCGAATTAGATTTCTTTGGACTTTGGGCTTATGATGCTGCTTATGCATTAGCCACGGCAATTGAAAATGTTGGCACTACAATATTTGGCTTCCAAAACACTACCAGTAATGCCTCCATGATCAACTCATCAATTGATCTTGAAACTTTTAGGGTCTCCCAAAGTGGCCAACTACTTCGCCAATCCTTGTCACGTACTAGATTTAAAGGTCTAACTGGAGATTTCAGTTTTGTTAATGGGGAGTTACAATCTTCAGCATTCGAAATAGTGAATGTGAATGGTGATGGAGCAGTAAGAACTATTGGATTTTGGACATCACAGGGTGGACTTTTGAAAAAGATTTCACTCAATTCGACAAACGCAAACAATGTGGGATTGGGATCTATTATATGGCCTGGAGATTCTACCTCTATTCCAAAGGGATGGGAGATCCCCACAAATGGGGAAAAAGTTGAGAGTAGGAGTTCCTGTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

362

Amino Acids

40.03

Weight (kDa)

5.29

Isoelectric Point (pI)

34.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 2 - 299 8.4e-72 Receptor family ligand binding region
Peripla_BP_6 PF13458 8 - 230 2e-10 Periplasmic binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 449, 1000, 1036
AcoI YGGCCR 2 cut(s) 294, 778
AcsI RAATTY 2 cut(s) 496, 581
AcuI CTGAAG 1 cut(s) 849
AdeI CACNNNGTG 1 cut(s) 935
AfaI GTAC 3 cut(s) 475, 567, 808
AfiI CCNNNNNNNGG 2 cut(s) 1052, 1053
AflIII ACRYGT 1 cut(s) 366
AgsI TTSAA 4 cut(s) 481, 677, 755, 946
AjnI CCWGG 1 cut(s) 1006
AluBI AGCT 4 cut(s) 38, 182, 322, 412
AluI AGCT 4 cut(s) 38, 182, 322, 412
Alw26I GTCTC 2 cut(s) 24, 772
AlwI GGATC 3 cut(s) 449, 1000, 1036
Ama87I CYCGRG 2 cut(s) 348, 387
AoxI GGCC 4 cut(s) 294, 524, 778, 1004
ApeKI GCWGC 1 cut(s) 650
ApoI RAATTY 2 cut(s) 496, 581
AspLEI GCGC 1 cut(s) 512
AsuHPI GGTGA 1 cut(s) 905
AsuII TTCGAA 1 cut(s) 873
AvaI CYCGRG 2 cut(s) 348, 387
BalI TGGCCA 2 cut(s) 296, 780
BauI CACGAG 1 cut(s) 261
BbsI GAAGAC 1 cut(s) 346
BbvI GCAGC 1 cut(s) 637
BccI CCATC 5 cut(s) 165, 446, 564, 890, 1029
BceAI ACGGC 1 cut(s) 684
BciT130I CCWGG 1 cut(s) 1008
BclI TGATCA 1 cut(s) 732
BcoDI GTCTC 2 cut(s) 24, 772
BfaI CTAG 2 cut(s) 413, 810
BisI GCNGC 1 cut(s) 651
BlsI GCNGC 1 cut(s) 652
Bme1390I CCNGG 1 cut(s) 1008
BmeT110I CYCGRG 2 cut(s) 348, 387
BmiI GGNNCC 1 cut(s) 45
BmrFI CCNGG 1 cut(s) 1008
BmsI GCATC 2 cut(s) 229, 637
BpiI GAAGAC 1 cut(s) 346
BpmI CTGGAG 2 cut(s) 849, 1029
Bpu10I CCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 873
BpuEI CTTGAG 1 cut(s) 117
BsaAI YACGTR 1 cut(s) 806
BsaBI GATNNNNATC 1 cut(s) 991
BsaI GGTCTC 1 cut(s) 772
BsaJI CCNNGG 3 cut(s) 291, 501, 666
BsaXI ACNNNNNCTCC 3 cut(s) 204, 234, 1066
Bsc4I CCNNNNNNNGG 2 cut(s) 1052, 1053
Bse1I ACTGG 2 cut(s) 717, 832
Bse8I GATNNNNATC 1 cut(s) 991
BseBI CCWGG 1 cut(s) 1008
BseDI CCNNGG 3 cut(s) 291, 501, 666
BseGI GGATG 2 cut(s) 176, 1040
BseJI GATNNNNATC 1 cut(s) 991
BseLI CCNNNNNNNGG 2 cut(s) 1052, 1053
BseMII CTCAG 1 cut(s) 53
BseNI ACTGG 2 cut(s) 717, 832
BseXI GCAGC 1 cut(s) 637
BshFI GGCC 4 cut(s) 296, 526, 780, 1006
BsiHKCI CYCGRG 2 cut(s) 348, 387
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 2 cut(s) 1052, 1053
BsmAI GTCTC 2 cut(s) 24, 772
BsmFI GGGAC 1 cut(s) 251
BsmI GAATGC 1 cut(s) 869
BsnI GGCC 4 cut(s) 296, 526, 780, 1006
Bso31I GGTCTC 1 cut(s) 772
BsoBI CYCGRG 2 cut(s) 348, 387
Bsp119I TTCGAA 1 cut(s) 873
Bsp143I GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
Bsp19I CCATGG 2 cut(s) 291, 501
BspANI GGCC 4 cut(s) 296, 526, 780, 1006
BspCNI CTCAG 1 cut(s) 52
BspHI TCATGA 2 cut(s) 444, 492
BspLI GGNNCC 1 cut(s) 45
BspPI GGATC 3 cut(s) 449, 1000, 1036
BspT104I TTCGAA 1 cut(s) 873
BspTNI GGTCTC 1 cut(s) 772
BsrI ACTGG 2 cut(s) 717, 832
BssECI CCNNGG 3 cut(s) 291, 501, 666
BssMI GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
BssSI CACGAG 1 cut(s) 261
BssT1I CCWWGG 2 cut(s) 291, 501
Bst2BI CACGAG 1 cut(s) 261
Bst2UI CCWGG 1 cut(s) 1008
BstBAI YACGTR 1 cut(s) 806
BstBI TTCGAA 1 cut(s) 873
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 2 cut(s) 39, 80
BstDSI CCRYGG 3 cut(s) 291, 501, 666
BstF5I GGATG 2 cut(s) 176, 1040
BstHHI GCGC 1 cut(s) 512
BstKTI GATC 7 cut(s) 25, 379, 444, 735, 751, 995, 1044
BstMAI GTCTC 2 cut(s) 24, 772
BstMBI GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
BstMWI GCNNNNNNNGC 3 cut(s) 532, 647, 656
BstNI CCWGG 1 cut(s) 1008
BstNSI RCATGY 1 cut(s) 370
BstSCI CCNGG 1 cut(s) 1006
BstV1I GCAGC 1 cut(s) 637
BstV2I GAAGAC 1 cut(s) 346
BstX2I RGATCY 2 cut(s) 992, 1041
BstXI CCANNNNNNTGG 1 cut(s) 1035
BstYI RGATCY 2 cut(s) 992, 1041
BsuRI GGCC 4 cut(s) 296, 526, 780, 1006
BtgI CCRYGG 3 cut(s) 291, 501, 666
BtsCI GGATG 2 cut(s) 176, 1040
BtsIMutI CAGTG 1 cut(s) 297
Cac8I GCNNGC 1 cut(s) 6
CciI TCATGA 2 cut(s) 444, 492
CfoI GCGC 1 cut(s) 512
Csp6I GTAC 3 cut(s) 474, 566, 807
CspCI CAANNNNNGTGG 4 cut(s) 655, 690, 963, 998
CviAII CATG 6 cut(s) 292, 367, 445, 493, 502, 730
CviQI GTAC 3 cut(s) 474, 566, 807
DdeI CTNAG 2 cut(s) 39, 80
DpnI GATC 7 cut(s) 24, 378, 443, 734, 750, 994, 1043
DpnII GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
DraI TTTAAA 1 cut(s) 817
DraIII CACNNNGTG 1 cut(s) 935
EaeI YGGCCR 2 cut(s) 294, 778
Eco130I CCWWGG 2 cut(s) 291, 501
Eco147I AGGCCT 1 cut(s) 526
Eco31I GGTCTC 1 cut(s) 772
Eco32I GATATC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 849
Eco88I CYCGRG 2 cut(s) 348, 387
EcoRI GAATTC 1 cut(s) 496
EcoRII CCWGG 1 cut(s) 1006
EcoRV GATATC 1 cut(s) 154
EcoT14I CCWWGG 2 cut(s) 291, 501
EcoT22I ATGCAT 1 cut(s) 661
ErhI CCWWGG 2 cut(s) 291, 501
FaeI CATG 6 cut(s) 295, 370, 448, 496, 505, 733
FaqI GGGAC 1 cut(s) 251
FatI CATG 6 cut(s) 291, 366, 444, 492, 501, 729
FbaI TGATCA 1 cut(s) 732
Fnu4HI GCNGC 1 cut(s) 651
FokI GGATG 2 cut(s) 183, 1047
Fsp4HI GCNGC 1 cut(s) 651
FspBI CTAG 2 cut(s) 413, 810
GlaI GCGC 1 cut(s) 511
GluI GCNGC 1 cut(s) 651
GsuI CTGGAG 2 cut(s) 849, 1029
HaeIII GGCC 4 cut(s) 296, 526, 780, 1006
HhaI GCGC 1 cut(s) 512
Hin1II CATG 6 cut(s) 295, 370, 448, 496, 505, 733
Hin6I GCGC 1 cut(s) 510
HinP1I GCGC 1 cut(s) 510
HinfI GANTC 4 cut(s) 125, 351, 485, 1013
HphI GGTGA 1 cut(s) 905
Hpy166II GTNNAC 2 cut(s) 364, 938
Hpy188III TCNNGA 4 cut(s) 387, 445, 493, 752
Hpy8I GTNNAC 2 cut(s) 364, 938
HpyAV CCTTC 4 cut(s) 84, 422, 500, 570
HpyCH4IV ACGT 1 cut(s) 805
HpyCH4V TGCA 5 cut(s) 4, 247, 317, 343, 659
HpyF10VI GCNNNNNNNGC 3 cut(s) 532, 647, 656
HpyF3I CTNAG 2 cut(s) 39, 80
HpySE526I ACGT 1 cut(s) 805
Hsp92II CATG 6 cut(s) 295, 370, 448, 496, 505, 733
HspAI GCGC 1 cut(s) 510
Ksp22I TGATCA 1 cut(s) 732
Kzo9I GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
LmnI GCTCC 1 cut(s) 899
LpnPI CCDG 8 cut(s) 26, 575, 612, 730, 813, 917, 993, 1020
Lsp1109I GCAGC 1 cut(s) 637
LweI GCATC 2 cut(s) 229, 637
MaeI CTAG 2 cut(s) 413, 810
MaeII ACGT 1 cut(s) 805
MaeIII GTNAC 2 cut(s) 801, 855
MalI GATC 7 cut(s) 24, 378, 443, 734, 750, 994, 1043
MboI GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
MboII GAAGA 2 cut(s) 346, 855
MfeI CAATTG 2 cut(s) 672, 744
MflI RGATCY 2 cut(s) 992, 1041
MlsI TGGCCA 2 cut(s) 296, 780
MluNI TGGCCA 2 cut(s) 296, 780
MlyI GAGTC 1 cut(s) 360
MmeI TCCRAC 1 cut(s) 610
MnlI CCTC 5 cut(s) 139, 208, 516, 736, 1030
Mox20I TGGCCA 2 cut(s) 296, 780
Mph1103I ATGCAT 1 cut(s) 661
MscI TGGCCA 2 cut(s) 296, 780
MseI TTAA 5 cut(s) 50, 458, 470, 816, 846
Msp20I TGGCCA 2 cut(s) 296, 780
MspR9I CCNGG 1 cut(s) 1008
MunI CAATTG 2 cut(s) 672, 744
Mva1269I GAATGC 1 cut(s) 869
MvaI CCWGG 1 cut(s) 1008
MwoI GCNNNNNNNGC 3 cut(s) 532, 647, 656
NcoI CCATGG 2 cut(s) 291, 501
NdeII GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
NlaIII CATG 6 cut(s) 295, 370, 448, 496, 505, 733
NlaIV GGNNCC 1 cut(s) 45
NmuCI GTSAC 1 cut(s) 801
NsiI ATGCAT 1 cut(s) 661
NspI RCATGY 1 cut(s) 370
NspV TTCGAA 1 cut(s) 873
PaeR7I CTCGAG 2 cut(s) 348, 387
PagI TCATGA 2 cut(s) 444, 492
PceI AGGCCT 1 cut(s) 526
PciI ACATGT 1 cut(s) 366
PctI GAATGC 1 cut(s) 869
PfeI GAWTC 3 cut(s) 125, 485, 1013
PkrI GCNGC 1 cut(s) 652
PleI GAGTC 1 cut(s) 359
PpsI GAGTC 1 cut(s) 359
Ppu21I YACGTR 1 cut(s) 806
PscI ACATGT 1 cut(s) 366
Psp6I CCWGG 1 cut(s) 1006
PspGI CCWGG 1 cut(s) 1006
PspN4I GGNNCC 1 cut(s) 45
PspXI VCTCGAGB 1 cut(s) 348
PsuI RGATCY 2 cut(s) 992, 1041
RsaI GTAC 3 cut(s) 475, 567, 808
RsaNI GTAC 3 cut(s) 474, 566, 807
SaqAI TTAA 5 cut(s) 50, 458, 470, 816, 846
SatI GCNGC 1 cut(s) 651
Sau3AI GATC 7 cut(s) 22, 376, 441, 732, 748, 992, 1041
SchI GAGTC 1 cut(s) 360
ScrFI CCNGG 1 cut(s) 1008
SetI ASST 9 cut(s) 40, 45, 184, 229, 324, 414, 808, 823, 1022
SfaNI GCATC 2 cut(s) 229, 637
Sfr274I CTCGAG 2 cut(s) 348, 387
SfuI TTCGAA 1 cut(s) 873
SlaI CTCGAG 2 cut(s) 348, 387
SmlI CTYRAG 3 cut(s) 132, 348, 387
SmoI CTYRAG 3 cut(s) 132, 348, 387
SseBI AGGCCT 1 cut(s) 526
SspI AATATT 1 cut(s) 696
SspMI CTAG 2 cut(s) 413, 810
StuI AGGCCT 1 cut(s) 526
StyD4I CCNGG 1 cut(s) 1006
StyI CCWWGG 2 cut(s) 291, 501
TaiI ACGT 1 cut(s) 808
TaqI TCGA 7 cut(s) 109, 349, 388, 555, 562, 873, 965
TatI WGTACW 1 cut(s) 473
TfiI GAWTC 3 cut(s) 125, 485, 1013
Tru1I TTAA 5 cut(s) 50, 458, 470, 816, 846
Tru9I TTAA 5 cut(s) 50, 458, 470, 816, 846
TscAI CASTG 1 cut(s) 304
TseFI GTSAC 1 cut(s) 801
TseI GCWGC 1 cut(s) 650
Tsp45I GTSAC 1 cut(s) 801
TspDTI ATGAA 4 cut(s) 346, 437, 441, 509
TspRI CASTG 1 cut(s) 304
XapI RAATTY 2 cut(s) 496, 581
XceI RCATGY 1 cut(s) 370
XhoI CTCGAG 2 cut(s) 348, 387
XspI CTAG 2 cut(s) 413, 810
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.