pycom08g04080

Glutamate receptor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
3119158 .. 3122616
3459 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04080.5

Sequence Viewer

Length: 2904 bp
ATGAAGAGGAGGACACGAACCAACCTGGTTTGTTCTTTTTTCTTGCTTATTTTTTTAAGCATTAATCTTTCCCTGGTCATGGGACAGAAGTCACAGAACACAACAATCCCGGTGAAAGTTGGTGTAATCCTTGATGACCTTGATTCATCAAGTACAAAAGTTTGGTTGAGCTGCATCGAAATGGCCCTCTCCGACTTTTATACCTCCCGTGCTTCCTCTTCAACTAGGCTGGCCTTGAGCATTAGAGACTCGAGAGAAGACGTTGTCGATGCAGCTGCTGCAGCTTTAGACCTGATAAAGAATCTTCAAGTGCAAGCAATCTTAGGACCGAAATCATCGATGCAAGCCAACTTTGTAATTGATCTTGGAGAGGAAGCCCAAGTGCCCATAATGTCATTTTCAGCTACAAGTCCTTCCCTCACTTCAATTCGGAGTCCATATTTTTTCCGAGCTGTGCAAAATGATTCCTCTCAAGTCAAAGCTATAAGTGCTATCATCGAGGCCTTTGGATGGAGAGAAGCGGTGCCAATCTATGTGGACAACGATTTCGGTGAGGGAGTAATACCTTACTTGGCCGATGCCTTGCAAGAAGTTGAAGCTCGTATCCCGTATCGAAGTGTCATACCTCCAGGGGCCAGTGATGATCAAATTAAGGCAGAGCTTTACAAGTTAATGACGATGCAAACTAGAGTCTTCATTGTGCACATGTTGCCCTCTCTTGGTAATCGCCTTTTCGCCAAGGCGCAAGAGATAGGAATGATGGATGAAGGCTATGTTTGGATCATGACTGGTGGGTTAACCAATCATATAACTACAATGAGTTCTTCAGTCCCTAATTCAATGGAAGGTGCATTGGGCGTGAGGACTTATGTGCCCCAAACGGTGGAGCTTGTGGATTTTAGAGATCGATGGAAAAAGAAATTTCAAAAGGAGAATCCAAACATAATTGATGCTGAACTAGATGTTCCTGCACTCCGGGCTTATGATGCTGCTTTTGCATTAGCCATGGCAGTTGAAAATGTCGGGACTAGGAACTTTGGCTTCGAAAAGATGAATGGTTCCACCAACTCATCAACTGATCTTGAAGATTTGGGGCTCTCTCAAAATGGTCCAGAACTTGGCAAGTCCTTGGCAAGTACTAAATTTACAGGCCTCGCTGGGAAATTCAGTTTTGTTGATGGGCAATTACAACCTTCCATCTTTGAAATGGTGAATGTTATTGGTCATGGAGCAAAAACAATTGGGTTTTGGGAACCACAGAGTGGACTTGTGAAAAAATTGAATTTCACAATCACAGAAAACACTACATATTCAACTTCTAAATCGAATCTGGGACCTATTGTATGGCCAGGAGATTCTACCTCGGTTCCCAAGGGATGGGAGAACCCGACATATGGCAAAAGGTTGAAGGTAGGAGTTCCAATAAGTGATGCTTTTGCTGAGTTTGTGAGGGTGGTACCTAATCCTAGCAACAATACAACCGAAGTTTCCGGGTTCTGTATCGACGTCTTTGATGCTGCAATGCGAAAATTGCCATATGCTGTTTCTTATGACTTCATTCCCTTTGCAAAGCCTGATGGTACAAGTGTTGGCAGTTACAGTGATTTGGTCGATCAAGTTTATCTTGGGAAATTCGACGCGTTGGCAGCGGACACAACAATTAGAGCAGACCGGTCTTTGTATGTGGACTTCACATTGCCATACACGGAATCAGGAGTGGTAATGGTAGTGCCAATGAAAGACGGCAAGAGCAAAAATGCATGGATCTTCTTGAAGCCTTTGACATGGGACCTCTGGCTGACAAGTTCTTGCTTTTTTGTCTTCATTGGTTTTGTGGTTTGGGTTCTTGAACACCGTATTAACGAAGAATTTCGAGGGCCTCCCTTGCATCAAGTTGGAACGAGCTTTTGGTTCTCCTTCTCGACCATGGTTTTTGCACACCGTGAGACGGTGATTAGCAACTTGGCAAGGTTTGTGGTGATTGTATGGGTGTTTGTGGTGCTGGTACTGACTCAAAGTTATACAGCCAGTCTAACTTCTCTATTAACAGTTCAACAACTTCAGCCAACTTTTACGAATTTAAGCGTTCTAATAAAGGAGGAGGAGTATATCGGGTACATTAATGGTTCTTTTGTCGGCAAACTTCTGATACAAAATGGTGTTGATCGATCCAAATTAAGGCCTTATAATTCTTCAGCACAATGTAATGAATTTTTAACAAACGGGAGTGCAAACGGAGGTATTGCTGCTGCTATTGATGAAACCCCCAACATGAAGCTTTTTCTCGCAAAATATTGCTCTACATACACCATGATTGGCCCCCTATTCAAAACTGGTGGCTTTGGCTTTGTCTTTCCGAAAGGTTCACCTCTTGTGTCAGATGTTTCGAGGGCGATTCTCAATGTGACTGAGGGAGATGAGATGAAGGACATTGAAAACAAATGGTTCACAGCAGATACCACATGTTCGGATACAAAACCGACCATCTCTAATTCCAACAGTCTTGGCCTTGATAGCTTTTGGGGTCTCTTCCTCATTGCCGGTGTCTCTTCATTATCCGCTCTTATCATATTTGCAGCCTCCTTCTGTTATAGGCATCGGCACATTTTCATGACAACGGAAGCCTCGGGATGGAAAAGAATTAGGGTCATGCTTAGATTCTTTGACCAAAAAGACCTCAGCTCTCATACTTTTAGAAAGAGTGGCGCTCGAGATGGAACATCCTCTAATGTTGGAGCTGCAGCTGTTGAGGCTTCACCAAACAATAACACCACCTGCCCGCCAAGCCCTGAATCAGGCCGTTCAAACGACACAGATCCAGACTCACATTTCTTCAGAGAACAAGGAACACCTTTTGGTGAAATACCAAATACTCCTGAAGGAGCTCAGGAAACCAATAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

968

Amino Acids

106.47

Weight (kDa)

5.5

Isoelectric Point (pI)

31.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2187
AarI CACCTGC 1 cut(s) 2783
AatII GACGTC 1 cut(s) 1509
Acc36I ACCTGC 1 cut(s) 2783
Acc65I GGTACC 1 cut(s) 1456
AccB1I GGYRCC 2 cut(s) 523, 1456
AccB7I CCANNNNNTGG 4 cut(s) 883, 1118, 1262, 1377
AccBSI CCGCTC 1 cut(s) 2561
AccII CGCG 1 cut(s) 1640
AciI CCGC 4 cut(s) 521, 1649, 2559, 2780
AclWI GGATC 4 cut(s) 788, 1772, 2163, 2810
AcoI YGGCCR 2 cut(s) 573, 1346
AcsI RAATTY 8 cut(s) 920, 1142, 1163, 1282, 1631, 1868, 2077, 2210
AcuI CTGAAG 5 cut(s) 810, 2045, 2178, 2818, 2898
AcyI GRCGYC 1 cut(s) 1506
AdeI CACNNNGTG 2 cut(s) 1262, 1943
AfaI GTAC 6 cut(s) 154, 1138, 1458, 1582, 2007, 2117
AflIII ACRYGT 3 cut(s) 705, 1638, 2462
AgeI ACCGGT 1 cut(s) 1671
AjnI CCWGG 4 cut(s) 24, 72, 628, 1348
AjuI GAANNNNNNNTTGG 2 cut(s) 1891, 1923
Alw21I GWGCWC 2 cut(s) 705, 2887
Alw26I GTCTC 4 cut(s) 240, 1940, 2531, 2551
Alw44I GTGCAC 1 cut(s) 701
AlwI GGATC 4 cut(s) 788, 1772, 2163, 2810
AlwNI CAGNNNCTG 1 cut(s) 278
Ama87I CYCGRG 3 cut(s) 250, 2626, 2709
ApaLI GTGCAC 1 cut(s) 701
ApoI RAATTY 8 cut(s) 920, 1142, 1163, 1282, 1631, 1868, 2077, 2210
ArsI GACNNNNNNTTYG 2 cut(s) 530, 562
AseI ATTAAT 2 cut(s) 63, 2121
AsiGI ACCGGT 1 cut(s) 1671
Asp700I GAANNNNTTC 1 cut(s) 1869
Asp718I GGTACC 1 cut(s) 1456
AspLEI GCGC 2 cut(s) 745, 2708
AspS9I GGNCC 8 cut(s) 184, 326, 633, 1109, 1334, 1789, 1877, 2318
AsuC2I CCSGG 3 cut(s) 110, 977, 1492
AsuHPI GGTGA 8 cut(s) 124, 563, 1222, 1963, 1990, 2358, 2748, 2870
AsuII TTCGAA 1 cut(s) 1044
AvaI CYCGRG 3 cut(s) 250, 2626, 2709
AvaII GGWCC 4 cut(s) 326, 1109, 1334, 1789
BaeGI GKGCMC 3 cut(s) 387, 705, 876
BaeI ACNNNNGTAYC 2 cut(s) 1572, 1605
BalI TGGCCA 1 cut(s) 1348
BanI GGYRCC 2 cut(s) 523, 1456
BanII GRGCYC 2 cut(s) 1098, 2887
BarI GAAGNNNNNNTAC 2 cut(s) 1673, 1705
BbsI GAAGAC 3 cut(s) 264, 685, 1813
Bbv12I GWGCWC 2 cut(s) 705, 2887
BbvCI CCTCAGC 1 cut(s) 2678
BceAI ACGGC 2 cut(s) 1759, 2784
BcgI CGANNNNNNTGC 2 cut(s) 257, 291
BciT130I CCWGG 4 cut(s) 26, 74, 630, 1350
BciVI GTATCC 2 cut(s) 614, 2464
BclI TGATCA 1 cut(s) 643
BcnI CCSGG 3 cut(s) 110, 977, 1492
BcoDI GTCTC 4 cut(s) 240, 1940, 2531, 2551
BfaI CTAG 5 cut(s) 225, 687, 959, 1029, 1467
BfmI CTRYAG 2 cut(s) 279, 2739
BfoI RGCGCY 1 cut(s) 2709
BfuAI ACCTGC 1 cut(s) 2783
BfuI GTATCC 2 cut(s) 614, 2464
BmcAI AGTACT 1 cut(s) 1138
Bme1390I CCNGG 7 cut(s) 26, 74, 110, 630, 977, 1350, 1492
Bme18I GGWCC 4 cut(s) 326, 1109, 1334, 1789
BmeT110I CYCGRG 3 cut(s) 250, 2626, 2709
BmgT120I GGNCC 8 cut(s) 184, 326, 633, 1109, 1334, 1789, 1877, 2318
BmiI GGNNCC 9 cut(s) 525, 634, 1060, 1254, 1335, 1368, 1458, 1790, 2320
BmrFI CCNGG 7 cut(s) 26, 74, 110, 630, 977, 1350, 1492
BoxI GACNNNNGTC 1 cut(s) 88
BpiI GAAGAC 3 cut(s) 264, 685, 1813
BplI GAGNNNNNCTC 2 cut(s) 2692, 2724
BpmI CTGGAG 1 cut(s) 612
Bpu10I CCTNAGC 2 cut(s) 2678, 2886
Bpu14I TTCGAA 1 cut(s) 1044
BpuEI CTTGAG 2 cut(s) 256, 456
BpuMI CCSGG 3 cut(s) 110, 977, 1492
Bsa29I ATCGAT 3 cut(s) 338, 907, 2167
BsaHI GRCGYC 1 cut(s) 1506
BsaI GGTCTC 1 cut(s) 2531
BsaJI CCNNGG 9 cut(s) 72, 629, 738, 1005, 1128, 1362, 1371, 1926, 2625
BsaWI WCCGGW 1 cut(s) 1671
BsaXI ACNNNNNCTCC 2 cut(s) 2090, 2120
Bse118I RCCGGY 2 cut(s) 1671, 2540
Bse1I ACTGG 4 cut(s) 636, 793, 2028, 2338
Bse3DI GCAATG 3 cut(s) 1527, 1694, 2535
BseBI CCWGG 4 cut(s) 26, 74, 630, 1350
BseCI ATCGAT 3 cut(s) 338, 907, 2167
BseDI CCNNGG 9 cut(s) 72, 629, 738, 1005, 1128, 1362, 1371, 1926, 2625
BseGI GGATG 5 cut(s) 515, 769, 1382, 2636, 2720
BseMI GCAATG 3 cut(s) 1527, 1694, 2535
BseMII CTCAG 4 cut(s) 1431, 2400, 2692, 2900
BseNI ACTGG 4 cut(s) 636, 793, 2028, 2338
BseRI GAGGAG 3 cut(s) 22, 2114, 2117
BseSI GKGCMC 3 cut(s) 387, 705, 876
BseYI CCCAGC 1 cut(s) 1157
BsgI GTGCAG 1 cut(s) 954
Bsh1236I CGCG 1 cut(s) 1640
BshNI GGYRCC 2 cut(s) 523, 1456
BshTI ACCGGT 1 cut(s) 1671
BshVI ATCGAT 3 cut(s) 338, 907, 2167
BsiHKAI GWGCWC 2 cut(s) 705, 2887
BsiHKCI CYCGRG 3 cut(s) 250, 2626, 2709
BsiSI CCGG 5 cut(s) 110, 976, 1491, 1672, 2541
BslFI GGGAC 5 cut(s) 96, 815, 1039, 1347, 1802
BsmAI GTCTC 4 cut(s) 240, 1940, 2531, 2551
BsmBI CGTCTC 1 cut(s) 1940
BsmFI GGGAC 5 cut(s) 96, 815, 1039, 1347, 1802
Bso31I GGTCTC 1 cut(s) 2531
BsoBI CYCGRG 3 cut(s) 250, 2626, 2709
Bsp119I TTCGAA 1 cut(s) 1044
Bsp1286I GDGCHC 5 cut(s) 387, 705, 876, 1098, 2887
Bsp19I CCATGG 2 cut(s) 1005, 1926
BspACI CCGC 4 cut(s) 521, 1649, 2559, 2780
BspCNI CTCAG 4 cut(s) 1432, 2401, 2691, 2899
BspDI ATCGAT 3 cut(s) 338, 907, 2167
BspFNI CGCG 1 cut(s) 1640
BspHI TCATGA 2 cut(s) 783, 2610
BspLI GGNNCC 9 cut(s) 525, 634, 1060, 1254, 1335, 1368, 1458, 1790, 2320
BspMAI CTGCAG 2 cut(s) 283, 2743
BspMI ACCTGC 1 cut(s) 2783
BspPI GGATC 4 cut(s) 788, 1772, 2163, 2810
BspT104I TTCGAA 1 cut(s) 1044
BspT107I GGYRCC 2 cut(s) 523, 1456
BspTNI GGTCTC 1 cut(s) 2531
BsrBI CCGCTC 1 cut(s) 2561
BsrDI GCAATG 3 cut(s) 1527, 1694, 2535
BsrFI RCCGGY 2 cut(s) 1671, 2540
BsrI ACTGG 4 cut(s) 636, 793, 2028, 2338
BssAI RCCGGY 2 cut(s) 1671, 2540
BssECI CCNNGG 9 cut(s) 72, 629, 738, 1005, 1128, 1362, 1371, 1926, 2625
BssNI GRCGYC 1 cut(s) 1506
BssT1I CCWWGG 5 cut(s) 738, 1005, 1128, 1371, 1926
Bst2UI CCWGG 4 cut(s) 26, 74, 630, 1350
Bst4CI ACNGT 7 cut(s) 883, 1601, 1856, 1943, 1951, 2050, 2501
Bst6I CTCTTC 3 cut(s) 223, 2534, 2554
BstACI GRCGYC 1 cut(s) 1506
BstAPI GCANNNNNTGC 2 cut(s) 278, 709
BstBI TTCGAA 1 cut(s) 1044
BstC8I GCNNGC 4 cut(s) 231, 315, 345, 2780
BstDEI CTNAG 6 cut(s) 322, 1440, 2409, 2654, 2678, 2886
BstDSI CCRYGG 2 cut(s) 1005, 1926
BstENI CCTNNNNNAGG 1 cut(s) 2793
BstF5I GGATG 5 cut(s) 515, 769, 1382, 2636, 2720
BstFNI CGCG 1 cut(s) 1640
BstH2I RGCGCY 1 cut(s) 2709
BstHHI GCGC 2 cut(s) 745, 2708
BstMAI GTCTC 4 cut(s) 240, 1940, 2531, 2551
BstNI CCWGG 4 cut(s) 26, 74, 630, 1350
BstNSI RCATGY 2 cut(s) 709, 2466
BstPAI GACNNNNGTC 1 cut(s) 88
BstSCI CCNGG 7 cut(s) 24, 72, 108, 628, 975, 1348, 1490
BstSFI CTRYAG 2 cut(s) 279, 2739
BstSLI GKGCMC 3 cut(s) 387, 705, 876
BstUI CGCG 1 cut(s) 1640
BstV2I GAAGAC 3 cut(s) 264, 685, 1813
BstX2I RGATCY 2 cut(s) 1764, 2815
BstYI RGATCY 2 cut(s) 1764, 2815
Bsu15I ATCGAT 3 cut(s) 338, 907, 2167
BsuI GTATCC 2 cut(s) 614, 2464
BsuTUI ATCGAT 3 cut(s) 338, 907, 2167
BtgI CCRYGG 2 cut(s) 1005, 1926
BtsCI GGATG 5 cut(s) 515, 769, 1382, 2636, 2720
BtsIMutI CAGTG 2 cut(s) 643, 1606
BveI ACCTGC 1 cut(s) 2783
Cac8I GCNNGC 4 cut(s) 231, 315, 345, 2780
CaiI CAGNNNCTG 1 cut(s) 278
CciI TCATGA 2 cut(s) 783, 2610
CfoI GCGC 2 cut(s) 745, 2708
Cfr10I RCCGGY 2 cut(s) 1671, 2540
Cfr13I GGNCC 8 cut(s) 184, 326, 633, 1109, 1334, 1789, 1877, 2318
ClaI ATCGAT 3 cut(s) 338, 907, 2167
CseI GACGC 1 cut(s) 1646
CsiI ACCWGGT 1 cut(s) 24
Csp6I GTAC 6 cut(s) 153, 1137, 1457, 1581, 2006, 2116
CspAI ACCGGT 1 cut(s) 1671
CspCI CAANNNNNGTGG 6 cut(s) 516, 551, 1956, 1991, 2317, 2352
CviQI GTAC 6 cut(s) 153, 1137, 1457, 1581, 2006, 2116
DdeI CTNAG 6 cut(s) 322, 1440, 2409, 2654, 2678, 2886
DraIII CACNNNGTG 2 cut(s) 1262, 1943
EaeI YGGCCR 2 cut(s) 573, 1346
Eam1104I CTCTTC 3 cut(s) 223, 2534, 2554
EarI CTCTTC 3 cut(s) 223, 2534, 2554
Ecl136II GAGCTC 1 cut(s) 2885
Eco130I CCWWGG 5 cut(s) 738, 1005, 1128, 1371, 1926
Eco147I AGGCCT 3 cut(s) 503, 1152, 2182
Eco24I GRGCYC 2 cut(s) 1098, 2887
Eco31I GGTCTC 1 cut(s) 2531
Eco47I GGWCC 4 cut(s) 326, 1109, 1334, 1789
Eco53kI GAGCTC 1 cut(s) 2885
Eco57I CTGAAG 5 cut(s) 810, 2045, 2178, 2818, 2898
Eco88I CYCGRG 3 cut(s) 250, 2626, 2709
EcoICRI GAGCTC 1 cut(s) 2885
EcoNI CCTNNNNNAGG 1 cut(s) 2793
EcoO109I RGGNCCY 3 cut(s) 1334, 1789, 1877
EcoRII CCWGG 4 cut(s) 24, 72, 628, 1348
EcoT14I CCWWGG 5 cut(s) 738, 1005, 1128, 1371, 1926
EcoT22I ATGCAT 1 cut(s) 1762
EcoT38I GRGCYC 2 cut(s) 1098, 2887
ErhI CCWWGG 5 cut(s) 738, 1005, 1128, 1371, 1926
Esp3I CGTCTC 1 cut(s) 1940
FalI AAGNNNNNCTT 4 cut(s) 1417, 1449, 1608, 1640
FaqI GGGAC 5 cut(s) 96, 815, 1039, 1347, 1802
FauI CCCGC 1 cut(s) 2787
FauNDI CATATG 2 cut(s) 1393, 1537
FbaI TGATCA 1 cut(s) 643
FokI GGATG 5 cut(s) 522, 776, 1389, 2643, 2707
FriOI GRGCYC 2 cut(s) 1098, 2887
FspBI CTAG 5 cut(s) 225, 687, 959, 1029, 1467
GlaI GCGC 2 cut(s) 744, 2707
GsaI CCCAGC 1 cut(s) 1161
GsuI CTGGAG 1 cut(s) 612
HaeII RGCGCY 1 cut(s) 2709
HapII CCGG 5 cut(s) 110, 976, 1491, 1672, 2541
HgaI GACGC 1 cut(s) 1646
HhaI GCGC 2 cut(s) 745, 2708
Hin1I GRCGYC 1 cut(s) 1506
Hin6I GCGC 2 cut(s) 743, 2706
HinP1I GCGC 2 cut(s) 743, 2706
HincII GTYRAC 1 cut(s) 798
HindII GTYRAC 1 cut(s) 798
HindIII AAGCTT 1 cut(s) 2276
HpaI GTTAAC 1 cut(s) 798
HpaII CCGG 5 cut(s) 110, 976, 1491, 1672, 2541
HphI GGTGA 8 cut(s) 124, 563, 1222, 1963, 1990, 2358, 2748, 2870
Hpy166II GTNNAC 7 cut(s) 538, 703, 798, 1265, 1687, 2366, 2448
Hpy188I TCNGA 8 cut(s) 193, 432, 449, 2148, 2358, 2380, 2470, 2837
Hpy8I GTNNAC 7 cut(s) 538, 703, 798, 1265, 1687, 2366, 2448
Hpy99I CGWCG 2 cut(s) 1508, 1640
HpyAV CCTTC 9 cut(s) 423, 761, 839, 1203, 1402, 1927, 2419, 2593, 2873
HpyCH4III ACNGT 7 cut(s) 883, 1601, 1856, 1943, 1951, 2050, 2501
HpyCH4IV ACGT 2 cut(s) 261, 1506
HpyF3I CTNAG 6 cut(s) 322, 1440, 2409, 2654, 2678, 2886
HpySE526I ACGT 2 cut(s) 261, 1506
Hsp92I GRCGYC 1 cut(s) 1506
HspAI GCGC 2 cut(s) 743, 2706
KpnI GGTACC 1 cut(s) 1460
Ksp22I TGATCA 1 cut(s) 643
KspAI GTTAAC 1 cut(s) 798
LmnI GCTCC 4 cut(s) 886, 1229, 2735, 2882
MabI ACCWGGT 1 cut(s) 24
MaeI CTAG 5 cut(s) 225, 687, 959, 1029, 1467
MaeII ACGT 2 cut(s) 261, 1506
MaeIII GTNAC 3 cut(s) 90, 1595, 2404
MbiI CCGCTC 1 cut(s) 2561
MfeI CAATTG 1 cut(s) 1239
MflI RGATCY 2 cut(s) 1764, 2815
MhlI GDGCHC 5 cut(s) 387, 705, 876, 1098, 2887
MlsI TGGCCA 1 cut(s) 1348
MluI ACGCGT 1 cut(s) 1638
MluNI TGGCCA 1 cut(s) 1348
MlyI GAGTC 5 cut(s) 242, 442, 699, 2005, 2816
MmeI TCCRAC 4 cut(s) 216, 1876, 2520, 2713
Mox20I TGGCCA 1 cut(s) 1348
Mph1103I ATGCAT 1 cut(s) 1762
MroXI GAANNNNTTC 1 cut(s) 1869
MscI TGGCCA 1 cut(s) 1348
MslI CAYNNNNRTG 2 cut(s) 179, 2609
Msp20I TGGCCA 1 cut(s) 1348
MspA1I CMGCKG 3 cut(s) 275, 1649, 2744
MspI CCGG 5 cut(s) 110, 976, 1491, 1672, 2541
MspR9I CCNGG 7 cut(s) 26, 74, 110, 630, 977, 1350, 1492
MunI CAATTG 1 cut(s) 1239
MvaI CCWGG 4 cut(s) 26, 74, 630, 1350
MvnI CGCG 1 cut(s) 1640
NciI CCSGG 3 cut(s) 110, 977, 1492
NcoI CCATGG 2 cut(s) 1005, 1926
NdeI CATATG 2 cut(s) 1393, 1537
NlaIV GGNNCC 9 cut(s) 525, 634, 1060, 1254, 1335, 1368, 1458, 1790, 2320
NmuCI GTSAC 2 cut(s) 90, 2404
NsiI ATGCAT 1 cut(s) 1762
NspI RCATGY 2 cut(s) 709, 2466
NspV TTCGAA 1 cut(s) 1044
PaeR7I CTCGAG 2 cut(s) 250, 2709
PagI TCATGA 2 cut(s) 783, 2610
PaqCI CACCTGC 1 cut(s) 2783
PceI AGGCCT 3 cut(s) 503, 1152, 2182
PciI ACATGT 2 cut(s) 705, 2462
PdmI GAANNNNTTC 1 cut(s) 1869
PflFI GACNNNGTC 1 cut(s) 263
PflMI CCANNNNNTGG 4 cut(s) 883, 1118, 1262, 1377
PinAI ACCGGT 1 cut(s) 1671
PleI GAGTC 5 cut(s) 242, 441, 698, 2005, 2816
PpsI GAGTC 5 cut(s) 242, 441, 698, 2005, 2816
PpuMI RGGWCCY 2 cut(s) 1334, 1789
PscI ACATGT 2 cut(s) 705, 2462
PshAI GACNNNNGTC 1 cut(s) 88
PshBI ATTAAT 2 cut(s) 63, 2121
PsiI TTATAA 1 cut(s) 2187
Psp124BI GAGCTC 1 cut(s) 2887
Psp5II RGGWCCY 2 cut(s) 1334, 1789
Psp6I CCWGG 4 cut(s) 24, 72, 628, 1348
PspFI CCCAGC 1 cut(s) 1157
PspGI CCWGG 4 cut(s) 24, 72, 628, 1348
PspN4I GGNNCC 9 cut(s) 525, 634, 1060, 1254, 1335, 1368, 1458, 1790, 2320
PspPI GGNCC 8 cut(s) 184, 326, 633, 1109, 1334, 1789, 1877, 2318
PspPPI RGGWCCY 2 cut(s) 1334, 1789
PstI CTGCAG 2 cut(s) 283, 2743
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 2 cut(s) 1764, 2815
PsyI GACNNNGTC 1 cut(s) 263
PvuII CAGCTG 2 cut(s) 275, 2744
RsaI GTAC 6 cut(s) 154, 1138, 1458, 1582, 2007, 2117
RsaNI GTAC 6 cut(s) 153, 1137, 1457, 1581, 2006, 2116
RseI CAYNNNNRTG 2 cut(s) 179, 2609
SacI GAGCTC 1 cut(s) 2887
Sau96I GGNCC 8 cut(s) 184, 326, 633, 1109, 1334, 1789, 1877, 2318
ScaI AGTACT 1 cut(s) 1138
SchI GAGTC 5 cut(s) 242, 442, 699, 2005, 2816
ScrFI CCNGG 7 cut(s) 26, 74, 110, 630, 977, 1350, 1492
SduI GDGCHC 5 cut(s) 387, 705, 876, 1098, 2887
SexAI ACCWGGT 1 cut(s) 24
SfcI CTRYAG 2 cut(s) 279, 2739
Sfr274I CTCGAG 2 cut(s) 250, 2709
SfuI TTCGAA 1 cut(s) 1044
SinI GGWCC 4 cut(s) 326, 1109, 1334, 1789
SlaI CTCGAG 2 cut(s) 250, 2709
SmiMI CAYNNNNRTG 2 cut(s) 179, 2609
SmlI CTYRAG 4 cut(s) 235, 250, 471, 2709
SmoI CTYRAG 4 cut(s) 235, 250, 471, 2709
SseBI AGGCCT 3 cut(s) 503, 1152, 2182
SsiI CCGC 4 cut(s) 521, 1649, 2559, 2780
SspI AATATT 1 cut(s) 2294
SspMI CTAG 5 cut(s) 225, 687, 959, 1029, 1467
SstI GAGCTC 1 cut(s) 2887
StuI AGGCCT 3 cut(s) 503, 1152, 2182
StyD4I CCNGG 7 cut(s) 24, 72, 108, 628, 975, 1348, 1490
StyI CCWWGG 5 cut(s) 738, 1005, 1128, 1371, 1926
TaaI ACNGT 7 cut(s) 883, 1601, 1856, 1943, 1951, 2050, 2501
TaiI ACGT 2 cut(s) 264, 1509
TaqII GACCGA 1 cut(s) 343
TatI WGTACW 2 cut(s) 152, 1136
TscAI CASTG 2 cut(s) 643, 1606
TseFI GTSAC 2 cut(s) 90, 2404
Tsp45I GTSAC 2 cut(s) 90, 2404
TspGWI ACGGA 3 cut(s) 1721, 2250, 2633
TspRI CASTG 2 cut(s) 643, 1606
Tth111I GACNNNGTC 1 cut(s) 263
Van91I CCANNNNNTGG 4 cut(s) 883, 1118, 1262, 1377
VneI GTGCAC 1 cut(s) 701
VpaK11BI GGWCC 4 cut(s) 326, 1109, 1334, 1789
VspI ATTAAT 2 cut(s) 63, 2121
XagI CCTNNNNNAGG 1 cut(s) 2793
XapI RAATTY 8 cut(s) 920, 1142, 1163, 1282, 1631, 1868, 2077, 2210
XceI RCATGY 2 cut(s) 709, 2466
XcmI CCANNNNNNNNNTGG 1 cut(s) 1204
XhoI CTCGAG 2 cut(s) 250, 2709
XmnI GAANNNNTTC 1 cut(s) 1869
XspI CTAG 5 cut(s) 225, 687, 959, 1029, 1467
ZraI GACGTC 1 cut(s) 1507
ZrmI AGTACT 1 cut(s) 1138
Zsp2I ATGCAT 1 cut(s) 1762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.