Rh6CG169800

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
23262852 .. 23270334
7483 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG169800.1

Sequence Viewer

Length: 2964 bp
ATGGTAGCGGTACCTGATAAAAGATTTACCTATATATATACAAGGGCTTTTAAATTCTTATGCCATCTTCAGAAGAGTCAAAATATGATCAACAAAGCTAAGTACCCTTCCAGCCTTGAAAATAAGCTTGCTCTGAGTTCTATGTTTTTTTTGTTTCTTTCATCATCGATTACCTTGGCTATGCCACAAAGCAAAACCATCATCCCAGTGAATGTGGGAGTTGTTTTGGATGACCATATACATTCACGGGCTCAAAAAATTTGGTTGAGCTGCATAAAAATGGCTCTCTTTGACTTCTATGCGTCTAATGCTGATTACAAGAGTAGGGTGGTCTTGAAAGTTAGGGACTCCAAACGAAATGTTGTTCATGCAGCTGCCGCAGCTCTTGATTTGATAAAGAATGAAAAAGTTCGAGCCATCATTGGACCAGTGACGACAATGGAGACCAGCTTCGTTATTAATCTTGGAAACGAAGCTCATGTGCCCATCATATCATTTTCTTCAACAAGCCCTTCTCTTACTTCGATCCGGAGCTCCTACTTTTTCCAATTTGCACAAAATGACTCAATCCAAGTGAAAGTTATAAGTTCCATTGTAAAAGCTTTTGGGTGGAGACAAGTTGTGCCGATCTACATAGACACTGCATACAGCGAGGCAATCATACCATACTTAACTGATGCCTTGGATGAGGTTGGGGCCCGGGTTCCCTACCGTAGTGTCATTTCCCCATCCGCAACTGATGATCAAATTGAAAAAGAGCTTTACAAGTTGATGACAATGCAAACTAGAGTTTTTCTTGTCCACATGACAACCTCACTATGCTCTAGGGTACTTTACAAGGCAAAAGCAATTGGAATGATGAGCGAGGGATATGTTTGGATCATGACCAGTGGGATAACTAATAGATTAAGGATGACGGACGACTTTTCATTCCTCAATTCCTTGGACGGAATATTAGGTGTTCAAACCTATGTCCCAAAAACAAAAGAACTTCATCAAGAGTTCATACCACGGTGGCATCTGCAGTTCCTAAAAGACACTCCAGCTAACAGTTTTTCTGCTAACTTGGATGTTTTTGCACTATGGGCTTATGATGCTGCTCATGCACTGGCCATAGCAATTGAAGAAGTAACTTGGAGTACAAGTAACATTGATTTCCAAAAGTCACATACTGCTCCCAACAACTCGACAGATCTTGAAAGTTTGGCGGTCTCTCAATATGGGCCAAAACTATGTAAAGCACTCTCAACTACTAGATTTAATGGCATTGCTGGAGATTTTAGACTTGTTGATAGGCAACTTCAATCCTCAACTTTTCAGATTGTTAACATAAATGGTGGTGCAACAAGAACAATCGGATTTTGGACACCAGAAAATGGACTATGTAAAAAGTTGGGCTCCTCAGTAAACACAGGAAAAGGTTCAATTTCTAATGGCAATCTGGGACCCATTATATGGCCAGGAGATTCTCTTTCTGTTCCCAAGGGATGGGAGATACCAACAAATGGCAAGAAGTTGAGAATTGCAGTTCCTCAGAAAGTTGGTTTTACTGAGTTCGTTAAGATCACAAAAGATCCAAGCACAAACATAACAGATGTCTCTGGGTTCACTATTGATGTCTTTGAGGCTGCGCTGGAGATATTGCCATATGCTCTTCCCTATGAATTTATTCCCTTTGCAAAGCCCGATGGCACCACTGCTGGCAATAACAATGATTTGTGCTATCAAGTTTCTATTGGGAACTTTGATGCTATAGTGGGAGATACAACAATTACAGCAAATAGGTCCTTGTTTGTAGACTTTACCATGCCATATACAGAAGCTGGTATAGTCATGGTTGTACCGGTCAGAGATAGCAATAGAAAGAGTGCATGGGCTTTCTTGAAGCCTTGGAGATGGGACCTGTGGTTTACAACTGCTTGTTTCTTCCTCTTCATTGGTTTCGTTGTTTGGGTTCTTGAACACCGAATTAATAAACACTTTCGGGGCCCTCCCTCACATCAAGTTGGTACCAGTATTTGGTTTTCTTTCTCCACCATGGTTTTTGCACAGACTGCAAGAGTTGTTAGCAACTGGGCTAGATTTGTGATGATTATCTGGATATTTGTTCTACTAGTACTGACAATAAATTACACGGCCAGTCTAACTTCACTATATACCGTCCAGAAACTCCAGCCAACCGTTACTGATATAAACGATCTATTAAAGAAAGGGGAGAAAGTTGGTCATGTAAGGAATTATGTTCGTGACATGTTGAAGCAAAAAGGTTTTGATGATTCAAAGCTTAAGCGTTTTACAACTGTGGAAGAAATTGATGACGCGCTTTCAAAAGGGAGTGCAAATGGTGGAGTGGCTGGTGTTATTGATGAAACTCCCAACCTGAAGCTTTTTCTTGCAAAGTATTGCAACAAATATACCATGGTTGGACCCTTCTTTAGAACTGATGGTTTTGCCTTTGCGTTTCCAAAAGGTTCCCCTTTTCTACAAGATGTTTCACAGGCAGTCCTAAACGTGACCGGGGGAGAGAAGATAATGAAAATTGAAAATAAATGGTTCAAGAAAGAAAGCAGCTGCCAAGACTTGACTAACCCAAACATTAATAGCAATGGTCTTGGTGTTGATAGCTTTTGGGTCTTATTTCTCATTGTGGCGGGGGCTTCAATACTAGCTCTGATAATATTTATAGTTTCGTTTATTTACAGGCATAAGGTTATCTGGAGTTCAGAAGCCTCTATTTGGTGTAGGATTCAAAAAATGTTAACTATCTTCAATGAAAAAGACCTGAGCCATCATACTTTTAATATCAATGAAAAGGAAGATGAAGTGACTCATGCCTTACCTAACTCCTCCCCAGAAAGTTCTGTGCACCAGAATTTGAACCAGGGAAATTCAAATTCTGTATTTTCTGGTTCTGGAGAGCAACAAGCAGCAAGGGTCTCCATGAGTAGCTGCTGCAACTCTTGA

Protein Analysis

987

Amino Acids

110.27

Weight (kDa)

8.91

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 88 - 434 1.3e-19 Periplasmic binding protein
ANF_receptor PF01094 89 - 446 8.8e-76 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 524 - 615 3.3e-06 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 533 - 853 6.6e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 633 - 886 6e-35 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 584
Acc65I GGTACC 2 cut(s) 10, 2009
AccB1I GGYRCC 3 cut(s) 10, 1691, 2009
AccB7I CCANNNNNTGG 5 cut(s) 1376, 1455, 1488, 1505, 2019
AccI GTMKAC 1 cut(s) 1797
AccII CGCG 1 cut(s) 2321
AccIII TCCGGA 1 cut(s) 528
AciI CCGC 5 cut(s) 8, 378, 732, 1208, 2651
AclWI GGATC 3 cut(s) 520, 887, 1568
AcoI YGGCCR 3 cut(s) 1110, 1457, 2136
AcsI RAATTY 6 cut(s) 53, 258, 1664, 2872, 2887, 2893
AcuI CTGAAG 2 cut(s) 53, 2402
AfaI GTAC 7 cut(s) 12, 104, 831, 1141, 1842, 2011, 2118
AfiI CCNNNNNNNGG 6 cut(s) 1376, 1455, 1488, 1505, 2019, 2736
AflII CTTAAG 1 cut(s) 2285
AflIII ACRYGT 1 cut(s) 2250
AgeI ACCGGT 1 cut(s) 1843
AhlI ACTAGT 1 cut(s) 2113
AjnI CCWGG 2 cut(s) 1459, 2880
Alw21I GWGCWC 2 cut(s) 536, 2868
Alw26I GTCTC 5 cut(s) 437, 607, 1216, 1603, 2941
Alw44I GTGCAC 1 cut(s) 2864
AlwI GGATC 3 cut(s) 520, 887, 1568
AlwNI CAGNNNCTG 1 cut(s) 1823
Ama87I CYCGRG 1 cut(s) 699
Aor13HI TCCGGA 1 cut(s) 528
AoxI GGCC 6 cut(s) 696, 1110, 1223, 1457, 1987, 2136
ApaI GGGCCC 2 cut(s) 700, 1991
ApaLI GTGCAC 1 cut(s) 2864
ApoI RAATTY 6 cut(s) 53, 258, 1664, 2872, 2887, 2893
AseI ATTAAT 3 cut(s) 459, 1971, 2598
AsiGI ACCGGT 1 cut(s) 1843
Asp700I GAANNNNTTC 3 cut(s) 408, 1420, 1668
Asp718I GGTACC 2 cut(s) 10, 2009
AspLEI GCGC 2 cut(s) 1633, 2323
AsuC2I CCSGG 3 cut(s) 700, 701, 2518
AvaI CYCGRG 1 cut(s) 699
AvaII GGWCC 5 cut(s) 425, 1445, 1785, 1900, 2426
BaeGI GKGCMC 4 cut(s) 486, 700, 1991, 2868
BalI TGGCCA 2 cut(s) 1112, 1459
BanI GGYRCC 3 cut(s) 10, 1691, 2009
BanII GRGCYC 5 cut(s) 253, 536, 700, 1400, 1991
Bbv12I GWGCWC 2 cut(s) 536, 2868
BceAI ACGGC 1 cut(s) 2151
BciT130I CCWGG 2 cut(s) 1461, 2882
BclI TGATCA 2 cut(s) 87, 742
BcnI CCSGG 3 cut(s) 700, 701, 2518
BcoDI GTCTC 5 cut(s) 437, 607, 1216, 1603, 2941
BcuI ACTAGT 1 cut(s) 2113
BfaI CTAG 6 cut(s) 786, 825, 1254, 2079, 2114, 2666
BfmI CTRYAG 2 cut(s) 1022, 1752
BfrI CTTAAG 1 cut(s) 2285
BglII AGATCT 1 cut(s) 1192
BmcAI AGTACT 1 cut(s) 2118
Bme1390I CCNGG 5 cut(s) 700, 701, 1461, 2518, 2882
Bme18I GGWCC 5 cut(s) 425, 1445, 1785, 1900, 2426
BmeT110I CYCGRG 1 cut(s) 699
BmrFI CCNGG 5 cut(s) 700, 701, 1461, 2518, 2882
BmrI ACTGGG 2 cut(s) 200, 2083
BmsI GCATC 4 cut(s) 667, 1027, 1084, 1738
BmuI ACTGGG 2 cut(s) 200, 2083
BpmI CTGGAG 6 cut(s) 1026, 1293, 1655, 2156, 2737, 2934
Bpu10I CCTNAGC 1 cut(s) 2783
BpuMI CCSGG 3 cut(s) 700, 701, 2518
Bsa29I ATCGAT 1 cut(s) 167
BsaBI GATNNNNATC 1 cut(s) 2093
BsaI GGTCTC 3 cut(s) 437, 1216, 2941
BsaWI WCCGGW 2 cut(s) 528, 1843
BsaXI ACNNNNNCTCC 2 cut(s) 1129, 1159
Bsc4I CCNNNNNNNGG 6 cut(s) 1376, 1455, 1488, 1505, 2019, 2736
Bse118I RCCGGY 1 cut(s) 1843
Bse1I ACTGG 7 cut(s) 206, 428, 888, 1113, 2013, 2078, 2139
Bse3DI GCAATG 2 cut(s) 1266, 2611
Bse8I GATNNNNATC 1 cut(s) 2093
BseAI TCCGGA 1 cut(s) 528
BseBI CCWGG 2 cut(s) 1461, 2882
BseCI ATCGAT 1 cut(s) 167
BseGI GGATG 7 cut(s) 201, 235, 691, 728, 918, 1075, 1493
BseJI GATNNNNATC 1 cut(s) 2093
BseLI CCNNNNNNNGG 6 cut(s) 1376, 1455, 1488, 1505, 2019, 2736
BseMI GCAATG 2 cut(s) 1266, 2611
BseMII CTCAG 5 cut(s) 125, 1416, 1542, 1547, 2774
BseNI ACTGG 7 cut(s) 206, 428, 888, 1113, 2013, 2078, 2139
BseRI GAGGAG 2 cut(s) 1390, 2836
BseSI GKGCMC 4 cut(s) 486, 700, 1991, 2868
Bsh1236I CGCG 1 cut(s) 2321
BshFI GGCC 6 cut(s) 698, 1112, 1225, 1459, 1989, 2138
BshNI GGYRCC 3 cut(s) 10, 1691, 2009
BshTI ACCGGT 1 cut(s) 1843
BshVI ATCGAT 1 cut(s) 167
BsiHKAI GWGCWC 2 cut(s) 536, 2868
BsiHKCI CYCGRG 1 cut(s) 699
BsiSI CCGG 4 cut(s) 529, 700, 1844, 2517
BslFI GGGAC 4 cut(s) 359, 959, 1458, 1913
BslI CCNNNNNNNGG 6 cut(s) 1376, 1455, 1488, 1505, 2019, 2736
BsmAI GTCTC 5 cut(s) 437, 607, 1216, 1603, 2941
BsmFI GGGAC 4 cut(s) 359, 959, 1458, 1913
BsnI GGCC 6 cut(s) 698, 1112, 1225, 1459, 1989, 2138
Bso31I GGTCTC 3 cut(s) 437, 1216, 2941
BsoBI CYCGRG 1 cut(s) 699
Bsp120I GGGCCC 2 cut(s) 696, 1987
Bsp1286I GDGCHC 7 cut(s) 253, 486, 536, 700, 1400, 1991, 2868
Bsp13I TCCGGA 1 cut(s) 528
Bsp143I GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
Bsp19I CCATGG 2 cut(s) 2037, 2418
BspACI CCGC 5 cut(s) 8, 378, 732, 1208, 2651
BspANI GGCC 6 cut(s) 698, 1112, 1225, 1459, 1989, 2138
BspCNI CTCAG 5 cut(s) 126, 1415, 1543, 1546, 2775
BspDI ATCGAT 1 cut(s) 167
BspEI TCCGGA 1 cut(s) 528
BspFNI CGCG 1 cut(s) 2321
BspHI TCATGA 1 cut(s) 882
BspMAI CTGCAG 1 cut(s) 1026
BspPI GGATC 3 cut(s) 520, 887, 1568
BspQI GCTCTTC 1 cut(s) 1659
BspT107I GGYRCC 3 cut(s) 10, 1691, 2009
BspTI CTTAAG 1 cut(s) 2285
BspTNI GGTCTC 3 cut(s) 437, 1216, 2941
BsrDI GCAATG 2 cut(s) 1266, 2611
BsrFI RCCGGY 1 cut(s) 1843
BsrI ACTGG 7 cut(s) 206, 428, 888, 1113, 2013, 2078, 2139
BssAI RCCGGY 1 cut(s) 1843
BssMI GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
BssT1I CCWWGG 7 cut(s) 174, 681, 942, 1482, 1889, 2037, 2418
Bst2UI CCWGG 2 cut(s) 1461, 2882
Bst4CI ACNGT 6 cut(s) 713, 1014, 1052, 2161, 2182, 2302
Bst6I CTCTTC 3 cut(s) 68, 1659, 1937
BstAFI CTTAAG 1 cut(s) 2285
BstAPI GCANNNNNTGC 1 cut(s) 2054
BstC8I GCNNGC 2 cut(s) 129, 1702
BstDEI CTNAG 6 cut(s) 99, 134, 1402, 1533, 1551, 2783
BstDSI CCRYGG 3 cut(s) 1010, 2037, 2418
BstF5I GGATG 7 cut(s) 201, 235, 691, 728, 918, 1075, 1493
BstFNI CGCG 1 cut(s) 2321
BstHHI GCGC 2 cut(s) 1633, 2323
BstKTI GATC 9 cut(s) 90, 528, 630, 745, 882, 1195, 1566, 1576, 2200
BstMAI GTCTC 5 cut(s) 437, 607, 1216, 1603, 2941
BstMBI GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
BstMWI GCNNNNNNNGC 7 cut(s) 308, 377, 380, 1085, 1094, 1103, 2054
BstNI CCWGG 2 cut(s) 1461, 2882
BstNSI RCATGY 1 cut(s) 2254
BstSCI CCNGG 5 cut(s) 698, 699, 1459, 2516, 2880
BstSFI CTRYAG 2 cut(s) 1022, 1752
BstSLI GKGCMC 4 cut(s) 486, 700, 1991, 2868
BstUI CGCG 1 cut(s) 2321
BstX2I RGATCY 2 cut(s) 1192, 1573
BstYI RGATCY 2 cut(s) 1192, 1573
Bsu15I ATCGAT 1 cut(s) 167
BsuRI GGCC 6 cut(s) 698, 1112, 1225, 1459, 1989, 2138
BsuTUI ATCGAT 1 cut(s) 167
BtgI CCRYGG 3 cut(s) 1010, 2037, 2418
BtsCI GGATG 7 cut(s) 201, 235, 691, 728, 918, 1075, 1493
BtsI GCAGTG 2 cut(s) 639, 1695
BtsIMutI CAGTG 6 cut(s) 213, 435, 639, 895, 1106, 1695
Cac8I GCNNGC 2 cut(s) 129, 1702
CaiI CAGNNNCTG 1 cut(s) 1823
CciI TCATGA 1 cut(s) 882
CfoI GCGC 2 cut(s) 1633, 2323
Cfr10I RCCGGY 1 cut(s) 1843
Cfr9I CCCGGG 1 cut(s) 699
ClaI ATCGAT 1 cut(s) 167
CseI GACGC 2 cut(s) 291, 2327
Csp6I GTAC 7 cut(s) 11, 103, 830, 1140, 1841, 2010, 2117
CspAI ACCGGT 1 cut(s) 1843
CviQI GTAC 7 cut(s) 11, 103, 830, 1140, 1841, 2010, 2117
DdeI CTNAG 6 cut(s) 99, 134, 1402, 1533, 1551, 2783
DpnI GATC 9 cut(s) 89, 527, 629, 744, 881, 1194, 1565, 1575, 2199
DpnII GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
DraI TTTAAA 1 cut(s) 52
EaeI YGGCCR 3 cut(s) 1110, 1457, 2136
Eam1104I CTCTTC 3 cut(s) 68, 1659, 1937
EarI CTCTTC 3 cut(s) 68, 1659, 1937
Ecl136II GAGCTC 1 cut(s) 534
Eco130I CCWWGG 7 cut(s) 174, 681, 942, 1482, 1889, 2037, 2418
Eco24I GRGCYC 5 cut(s) 253, 536, 700, 1400, 1991
Eco31I GGTCTC 3 cut(s) 437, 1216, 2941
Eco47I GGWCC 5 cut(s) 425, 1445, 1785, 1900, 2426
Eco53kI GAGCTC 1 cut(s) 534
Eco57I CTGAAG 2 cut(s) 53, 2402
Eco88I CYCGRG 1 cut(s) 699
EcoICRI GAGCTC 1 cut(s) 534
EcoO109I RGGNCCY 6 cut(s) 696, 1445, 1785, 1900, 1987, 1988
EcoRII CCWGG 2 cut(s) 1459, 2880
EcoT14I CCWWGG 7 cut(s) 174, 681, 942, 1482, 1889, 2037, 2418
EcoT38I GRGCYC 5 cut(s) 253, 536, 700, 1400, 1991
ErhI CCWWGG 7 cut(s) 174, 681, 942, 1482, 1889, 2037, 2418
FaqI GGGAC 4 cut(s) 359, 959, 1458, 1913
FauI CCCGC 1 cut(s) 2644
FauNDI CATATG 1 cut(s) 1648
FbaI TGATCA 2 cut(s) 87, 742
FblI GTMKAC 1 cut(s) 1797
FokI GGATG 7 cut(s) 188, 242, 698, 715, 925, 1082, 1500
FriOI GRGCYC 5 cut(s) 253, 536, 700, 1400, 1991
FspBI CTAG 6 cut(s) 786, 825, 1254, 2079, 2114, 2666
GlaI GCGC 2 cut(s) 1632, 2322
GsuI CTGGAG 6 cut(s) 1026, 1293, 1655, 2156, 2737, 2934
HaeIII GGCC 6 cut(s) 698, 1112, 1225, 1459, 1989, 2138
HapII CCGG 4 cut(s) 529, 700, 1844, 2517
HgaI GACGC 2 cut(s) 291, 2327
HhaI GCGC 2 cut(s) 1633, 2323
Hin6I GCGC 2 cut(s) 1631, 2321
HinP1I GCGC 2 cut(s) 1631, 2321
HincII GTYRAC 2 cut(s) 1327, 2760
HindII GTYRAC 2 cut(s) 1327, 2760
HindIII AAGCTT 4 cut(s) 125, 600, 2282, 2384
HinfI GANTC 7 cut(s) 76, 347, 563, 1466, 2276, 2746, 2827
HpaI GTTAAC 2 cut(s) 1327, 2760
HpaII CCGG 4 cut(s) 529, 700, 1844, 2517
Hpy166II GTNNAC 8 cut(s) 802, 1327, 1408, 1608, 1798, 1911, 2760, 2866
Hpy188I TCNGA 8 cut(s) 72, 135, 1320, 1358, 1536, 1850, 2673, 2725
Hpy8I GTNNAC 8 cut(s) 802, 1327, 1408, 1608, 1798, 1911, 2760, 2866
HpyAV CCTTC 3 cut(s) 117, 522, 2440
HpyCH4III ACNGT 6 cut(s) 713, 1014, 1052, 2161, 2182, 2302
HpyCH4IV ACGT 1 cut(s) 2511
HpyF10VI GCNNNNNNNGC 7 cut(s) 308, 377, 380, 1085, 1094, 1103, 2054
HpyF3I CTNAG 6 cut(s) 99, 134, 1402, 1533, 1551, 2783
HpySE526I ACGT 1 cut(s) 2511
HspAI GCGC 2 cut(s) 1631, 2321
KflI GGGWCCC 1 cut(s) 1445
Kpn2I TCCGGA 1 cut(s) 528
KpnI GGTACC 2 cut(s) 14, 2013
Ksp22I TGATCA 2 cut(s) 87, 742
KspAI GTTAAC 2 cut(s) 1327, 2760
Kzo9I GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
LguI GCTCTTC 1 cut(s) 1659
LmnI GCTCC 4 cut(s) 531, 539, 1180, 1403
LweI GCATC 4 cut(s) 667, 1027, 1084, 1738
MaeI CTAG 6 cut(s) 786, 825, 1254, 2079, 2114, 2666
MaeII ACGT 1 cut(s) 2511
MaeIII GTNAC 8 cut(s) 430, 1129, 1145, 1164, 2182, 2246, 2512, 2824
MalI GATC 9 cut(s) 89, 527, 629, 744, 881, 1194, 1565, 1575, 2199
MboI GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
MfeI CAATTG 2 cut(s) 849, 1119
MflI RGATCY 2 cut(s) 1192, 1573
MhlI GDGCHC 7 cut(s) 253, 486, 536, 700, 1400, 1991, 2868
MlsI TGGCCA 2 cut(s) 1112, 1459
MluNI TGGCCA 2 cut(s) 1112, 1459
MlyI GAGTC 4 cut(s) 85, 341, 557, 2821
MmeI TCCRAC 1 cut(s) 2404
Mox20I TGGCCA 2 cut(s) 1112, 1459
MroI TCCGGA 1 cut(s) 528
MroXI GAANNNNTTC 3 cut(s) 408, 1420, 1668
MscI TGGCCA 2 cut(s) 1112, 1459
MslI CAYNNNNRTG 2 cut(s) 206, 278
Msp20I TGGCCA 2 cut(s) 1112, 1459
MspA1I CMGCKG 2 cut(s) 374, 2571
MspCI CTTAAG 1 cut(s) 2285
MspI CCGG 4 cut(s) 529, 700, 1844, 2517
MspR9I CCNGG 5 cut(s) 700, 701, 1461, 2518, 2882
MunI CAATTG 2 cut(s) 849, 1119
MvaI CCWGG 2 cut(s) 1461, 2882
MvnI CGCG 1 cut(s) 2321
MwoI GCNNNNNNNGC 7 cut(s) 308, 377, 380, 1085, 1094, 1103, 2054
NciI CCSGG 3 cut(s) 700, 701, 2518
NcoI CCATGG 2 cut(s) 2037, 2418
NdeI CATATG 1 cut(s) 1648
NdeII GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
NmuCI GTSAC 5 cut(s) 430, 1164, 2246, 2512, 2824
NspI RCATGY 1 cut(s) 2254
PagI TCATGA 1 cut(s) 882
PciI ACATGT 1 cut(s) 2250
PciSI GCTCTTC 1 cut(s) 1659
PdmI GAANNNNTTC 3 cut(s) 408, 1420, 1668
PfeI GAWTC 3 cut(s) 1466, 2276, 2746
PflMI CCANNNNNTGG 5 cut(s) 1376, 1455, 1488, 1505, 2019
PinAI ACCGGT 1 cut(s) 1843
PleI GAGTC 4 cut(s) 84, 341, 557, 2821
PpsI GAGTC 4 cut(s) 84, 341, 557, 2821
PpuMI RGGWCCY 3 cut(s) 1445, 1785, 1900
PscI ACATGT 1 cut(s) 2250
PshBI ATTAAT 3 cut(s) 459, 1971, 2598
PsiI TTATAA 1 cut(s) 584
Psp124BI GAGCTC 1 cut(s) 536
Psp5II RGGWCCY 3 cut(s) 1445, 1785, 1900
Psp6I CCWGG 2 cut(s) 1459, 2880
PspGI CCWGG 2 cut(s) 1459, 2880
PspOMI GGGCCC 2 cut(s) 696, 1987
PspPPI RGGWCCY 3 cut(s) 1445, 1785, 1900
PstI CTGCAG 1 cut(s) 1026
PstNI CAGNNNCTG 1 cut(s) 1823
PsuI RGATCY 2 cut(s) 1192, 1573
PvuII CAGCTG 2 cut(s) 374, 2571
RsaI GTAC 7 cut(s) 12, 104, 831, 1141, 1842, 2011, 2118
RsaNI GTAC 7 cut(s) 11, 103, 830, 1140, 1841, 2010, 2117
RseI CAYNNNNRTG 2 cut(s) 206, 278
SacI GAGCTC 1 cut(s) 536
SapI GCTCTTC 1 cut(s) 1659
Sau3AI GATC 9 cut(s) 87, 525, 627, 742, 879, 1192, 1563, 1573, 2197
ScaI AGTACT 1 cut(s) 2118
SchI GAGTC 4 cut(s) 85, 341, 557, 2821
ScrFI CCNGG 5 cut(s) 700, 701, 1461, 2518, 2882
SduI GDGCHC 7 cut(s) 253, 486, 536, 700, 1400, 1991, 2868
SfaNI GCATC 4 cut(s) 667, 1027, 1084, 1738
SfcI CTRYAG 2 cut(s) 1022, 1752
SinI GGWCC 5 cut(s) 425, 1445, 1785, 1900, 2426
SmaI CCCGGG 1 cut(s) 701
SmiMI CAYNNNNRTG 2 cut(s) 206, 278
SmlI CTYRAG 1 cut(s) 2285
SmoI CTYRAG 1 cut(s) 2285
SpeI ACTAGT 1 cut(s) 2113
SsiI CCGC 5 cut(s) 8, 378, 732, 1208, 2651
SspI AATATT 2 cut(s) 954, 2679
SspMI CTAG 6 cut(s) 786, 825, 1254, 2079, 2114, 2666
SstI GAGCTC 1 cut(s) 536
StyD4I CCNGG 5 cut(s) 698, 699, 1459, 2516, 2880
StyI CCWWGG 7 cut(s) 174, 681, 942, 1482, 1889, 2037, 2418
TaaI ACNGT 6 cut(s) 713, 1014, 1052, 2161, 2182, 2302
TaiI ACGT 1 cut(s) 2514
TaqI TCGA 4 cut(s) 167, 412, 524, 1187
TatI WGTACW 2 cut(s) 1139, 2116
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 3 cut(s) 1466, 2276, 2746
TscAI CASTG 6 cut(s) 213, 435, 646, 895, 1113, 1702
TseFI GTSAC 5 cut(s) 430, 1164, 2246, 2512, 2824
Tsp45I GTSAC 5 cut(s) 430, 1164, 2246, 2512, 2824
TspGWI ACGGA 2 cut(s) 932, 963
TspMI CCCGGG 1 cut(s) 699
TspRI CASTG 6 cut(s) 213, 435, 646, 895, 1113, 1702
Van91I CCANNNNNTGG 5 cut(s) 1376, 1455, 1488, 1505, 2019
Vha464I CTTAAG 1 cut(s) 2285
VneI GTGCAC 1 cut(s) 2864
VpaK11BI GGWCC 5 cut(s) 425, 1445, 1785, 1900, 2426
VspI ATTAAT 3 cut(s) 459, 1971, 2598
XapI RAATTY 6 cut(s) 53, 258, 1664, 2872, 2887, 2893
XceI RCATGY 1 cut(s) 2254
XmaI CCCGGG 1 cut(s) 699
XmiI GTMKAC 1 cut(s) 1797
XmnI GAANNNNTTC 3 cut(s) 408, 1420, 1668
XspI CTAG 6 cut(s) 786, 825, 1254, 2079, 2114, 2666
ZrmI AGTACT 1 cut(s) 2118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.