Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004838.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

70058 .. 73189

Gene Structure 3132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004838.1_g000016.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

atgaaagccaactttgtaattgatcttggagataaagctaaggtgcctataatctcattttcgaaggcaaatccttccctgacttcttttcagcgttcatattttttccaagttgcaaagaatgactcatctcaagtgaaagccataagtgccataattcaatcttttggctggaatgaagcagtgcccatttttgtcgacgatgagttttgggagggtacattaccttacatgattaatgttctacaagaagttggtgctcgtattccctactgcagtgtcattcctctaatggccactgatgaccaaattgttgtgaagcttcaacatctcatgacaatgaaaacaagggtattcattgtacacatgttgccttctcttggctcccggctttttgccaaggcaaaagagatgggcatgatgggtgaaggttatgtttggataatgacagatggaatgaccaactcttttggatccataaattcttctgtcacagataacatgcaaggtgtgttagcattaagaacttatgttccaaatacacaagagcttgaaaatttcagggtccgatggcacagaaaattccaaatagagaatccaaccatccttaatgttagatcagatgatatttttggacagtgggcttatgatgctgcttgggcactagccatggcagttgagaaggttataaattctacaagcttcaactttcaaaaggtgaacatttctggcagttccactgatctagaacgattaggggtctccgaaagtggttctgaactcgtccaagcactatcaacgacaaaattcagaggcctttctggaaatttcagtcttcttaatggacaactacagtcttcaatttttgagataatcaatgtgaatggtaatggggtaagaggagttggatattggacacccaaaaatggacttgttagaaatttaaattcagcaagcagcggatattctagttctacttccaatcccagtgaccttggacttattatatggcccggagacaccatcaccattccaaaaggttggcagattcctaaccatgggaataagttgaaaattctagttccagtgaagcatgggtttaaagaatttgtaaatgtgacagtggatcctacaactaacacaaccatggtcactggatattgcatagacatttttaaagcagtaatcgaagaattaccatacgctgtttcttatgaattttatccctttgtaaagcctaatggtgaaccagctggcagctacgaggatttgatctctcaagtgtttcttgggaactatgatgcagcagttggagatataaccattagagcaaataggtcatcgttggttgactttacattgccatacacagaatctggagtatcaatggtggtgcctatcaaagtgaagaaaagtaggcaaagtgcattggtgttcttgaagccttttacttgggacctttgggtaacaagctgttgctttttctttgtcattgggttcgtgatctgggttcttgaacaccgattgaatgaagattttcgtgggcctccgtcacaccagattggtacaaccttttggttttctttctcaaccatggtttttgcacaacgcgagaaagtagtgagcaacttaggtaggactgtggtgatcgtgtggtgctttgttgtcctcatactgacacaaagttatactgccagtttgacatcacttttaacagttcaacagctccaaccaaccgttgctaatgtaggtctgctcctcaagaatggagacttcgttggtttccaagaaggttcttctgtacagaactttttgacaaatgaactgggatttcatgtggaaaagcttagggcatataggtctggagaagatctggctcaactgtttgagaaaggggcaatttctgctgcttttgatgaaacccctttcatgaaccttttcctttcaacttattgctcaaaatataccatggttgagccaatactatccaaaactggcagcggctttgcatttgcctttacgaaaggtgtgcctcttacacttgatgtttcaaggatgaatggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

688

Amino Acids

76.48

Weight (kDa)

6.49

Isoelectric Point (pI)

26.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	689
AccB1I	GGYRCC	2 cut(s)	43, 1393
AccI	GTMKAC	1 cut(s)	198
AccII	CGCG	1 cut(s)	1611
AciI	CCGC	2 cut(s)	960, 2001
AclWI	GGATC	4 cut(s)	468, 481, 1121, 1134
AcoI	YGGCCR	1 cut(s)	294
AfaI	GTAC	4 cut(s)	220, 363, 1567, 1803
AfiI	CCNNNNNNNGG	3 cut(s)	380, 926, 1058
AflIII	ACRYGT	1 cut(s)	366
AloI	GAACNNNNNNTCC	2 cut(s)	517, 549
AluBI	AGCT	9 cut(s)	38, 322, 550, 702, 1253, 1260, 1473, 1726, 1846
AluI	AGCT	9 cut(s)	38, 322, 550, 702, 1253, 1260, 1473, 1726, 1846
Alw21I	GWGCWC	1 cut(s)	262
Alw26I	GTCTC	3 cut(s)	766, 1011, 1764
AlwI	GGATC	4 cut(s)	468, 481, 1121, 1134
AlwNI	CAGNNNCTG	1 cut(s)	1376
AoxI	GGCC	4 cut(s)	294, 814, 1010, 1544
ApeKI	GCWGC	6 cut(s)	653, 957, 1257, 1304, 1907, 1998
AseI	ATTAAT	1 cut(s)	237
Asp700I	GAANNNNTTC	2 cut(s)	1536, 1937
AspS9I	GGNCC	4 cut(s)	565, 1011, 1456, 1544
AsuC2I	CCSGG	2 cut(s)	388, 1014
AsuHPI	GGTGA	5 cut(s)	437, 730, 1018, 1256, 1657
AsuII	TTCGAA	1 cut(s)	62
AvaII	GGWCC	2 cut(s)	565, 1456
BaeGI	GKGCMC	2 cut(s)	189, 664
BalI	TGGCCA	1 cut(s)	296
BamHI	GGATCC	2 cut(s)	473, 1126
BanI	GGYRCC	2 cut(s)	43, 1393
BbsI	GAAGAC	2 cut(s)	827, 849
Bbv12I	GWGCWC	1 cut(s)	262
BbvI	GCAGC	6 cut(s)	640, 969, 1269, 1316, 1894, 2010
BccI	CCATC	6 cut(s)	406, 415, 446, 564, 611, 1031
BcgI	CGANNNNNNTGC	2 cut(s)	2011, 2045
BcnI	CCSGG	2 cut(s)	388, 1014
BcoDI	GTCTC	3 cut(s)	766, 1011, 1764
BfaI	CTAG	4 cut(s)	665, 746, 969, 1079
BfmI	CTRYAG	2 cut(s)	274, 851
BglII	AGATCT	1 cut(s)	1870
BisI	GCNGC	7 cut(s)	654, 958, 1258, 1305, 1908, 1999, 2002
BlsI	GCNGC	7 cut(s)	655, 959, 1259, 1306, 1909, 2000, 2003
Bme1390I	CCNGG	2 cut(s)	388, 1014
Bme18I	GGWCC	2 cut(s)	565, 1456
BmgT120I	GGNCC	4 cut(s)	565, 1011, 1456, 1544
BmiI	GGNNCC	7 cut(s)	45, 385, 475, 566, 1128, 1395, 1457
BmrFI	CCNGG	2 cut(s)	388, 1014
BmrI	ACTGGG	2 cut(s)	981, 1835
BmsI	GCATC	2 cut(s)	640, 1291
BmuI	ACTGGG	2 cut(s)	981, 1835
BpiI	GAAGAC	2 cut(s)	827, 849
BpmI	CTGGAG	2 cut(s)	1398, 1884
Bpu10I	CCTNAGC	2 cut(s)	39, 1847
Bpu14I	TTCGAA	1 cut(s)	62
BpuEI	CTTGAG	3 cut(s)	117, 1263, 1745
BpuMI	CCSGG	2 cut(s)	388, 1014
BsaI	GGTCTC	1 cut(s)	766
BsaJI	CCNNGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
BsaXI	ACNNNNNCTCC	2 cut(s)	1761, 1791
Bsc4I	CCNNNNNNNGG	3 cut(s)	380, 926, 1058
Bse1I	ACTGG	6 cut(s)	987, 1085, 1159, 1695, 1830, 1999
Bse3DI	GCAATG	1 cut(s)	1358
BseDI	CCNNGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
BseGI	GGATG	2 cut(s)	603, 2061
BseLI	CCNNNNNNNGG	3 cut(s)	380, 926, 1058
BseMI	GCAATG	1 cut(s)	1358
BseNI	ACTGG	6 cut(s)	987, 1085, 1159, 1695, 1830, 1999
BseRI	GAGGAG	2 cut(s)	915, 1748
BseSI	GKGCMC	2 cut(s)	189, 664
BseXI	GCAGC	6 cut(s)	640, 969, 1269, 1316, 1894, 2010
Bsh1236I	CGCG	1 cut(s)	1611
BshFI	GGCC	4 cut(s)	296, 816, 1012, 1546
BshNI	GGYRCC	2 cut(s)	43, 1393
BsiHKAI	GWGCWC	1 cut(s)	262
BsiSI	CCGG	2 cut(s)	388, 1014
BslFI	GGGAC	1 cut(s)	1469
BslI	CCNNNNNNNGG	3 cut(s)	380, 926, 1058
BsmAI	GTCTC	3 cut(s)	766, 1011, 1764
BsmFI	GGGAC	1 cut(s)	1469
BsnI	GGCC	4 cut(s)	296, 816, 1012, 1546
Bso31I	GGTCTC	1 cut(s)	766
Bsp119I	TTCGAA	1 cut(s)	62
Bsp1286I	GDGCHC	3 cut(s)	189, 262, 664
Bsp1407I	TGTACA	2 cut(s)	361, 1801
Bsp143I	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
Bsp19I	CCATGG	5 cut(s)	669, 1057, 1146, 1593, 1968
BspACI	CCGC	2 cut(s)	960, 2001
BspANI	GGCC	4 cut(s)	296, 816, 1012, 1546
BspFNI	CGCG	1 cut(s)	1611
BspHI	TCATGA	2 cut(s)	333, 1929
BspLI	GGNNCC	7 cut(s)	45, 385, 475, 566, 1128, 1395, 1457
BspMAI	CTGCAG	1 cut(s)	278
BspPI	GGATC	4 cut(s)	468, 481, 1121, 1134
BspT104I	TTCGAA	1 cut(s)	62
BspT107I	GGYRCC	2 cut(s)	43, 1393
BspTNI	GGTCTC	1 cut(s)	766
BsrDI	GCAATG	1 cut(s)	1358
BsrGI	TGTACA	2 cut(s)	361, 1801
BsrI	ACTGG	6 cut(s)	987, 1085, 1159, 1695, 1830, 1999
BssECI	CCNNGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
BssMI	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
BssT1I	CCWWGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
Bst4CI	ACNGT	7 cut(s)	639, 855, 1123, 1642, 1717, 1738, 1884
BstAPI	GCANNNNNTGC	1 cut(s)	1904
BstAUI	TGTACA	2 cut(s)	361, 1801
BstBI	TTCGAA	1 cut(s)	62
BstC8I	GCNNGC	2 cut(s)	955, 1255
BstDEI	CTNAG	3 cut(s)	39, 1630, 1847
BstDSI	CCRYGG	5 cut(s)	669, 1057, 1146, 1593, 1968
BstF5I	GGATG	2 cut(s)	603, 2061
BstFNI	CGCG	1 cut(s)	1611
BstKTI	GATC	9 cut(s)	25, 476, 620, 745, 1129, 1275, 1506, 1650, 1873
BstMAI	GTCTC	3 cut(s)	766, 1011, 1764
BstMBI	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
BstMWI	GCNNNNNNNGC	4 cut(s)	149, 650, 659, 1904
BstNSI	RCATGY	2 cut(s)	370, 505
BstSCI	CCNGG	2 cut(s)	386, 1012
BstSFI	CTRYAG	2 cut(s)	274, 851
BstSLI	GKGCMC	2 cut(s)	189, 664
BstUI	CGCG	1 cut(s)	1611
BstV1I	GCAGC	6 cut(s)	640, 969, 1269, 1316, 1894, 2010
BstV2I	GAAGAC	2 cut(s)	827, 849
BstX2I	RGATCY	3 cut(s)	473, 1126, 1870
BstXI	CCANNNNNNTGG	1 cut(s)	1041
BstYI	RGATCY	3 cut(s)	473, 1126, 1870
BsuRI	GGCC	4 cut(s)	296, 816, 1012, 1546
BtgI	CCRYGG	5 cut(s)	669, 1057, 1146, 1593, 1968
BtsCI	GGATG	2 cut(s)	603, 2061
BtsI	GCAGTG	2 cut(s)	189, 283
BtsIMutI	CAGTG	9 cut(s)	189, 283, 297, 644, 738, 994, 1092, 1128, 1152
Cac8I	GCNNGC	2 cut(s)	955, 1255
CaiI	CAGNNNCTG	1 cut(s)	1376
CciI	TCATGA	2 cut(s)	333, 1929
Cfr13I	GGNCC	4 cut(s)	565, 1011, 1456, 1544
Csp6I	GTAC	4 cut(s)	219, 362, 1566, 1802
CviQI	GTAC	4 cut(s)	219, 362, 1566, 1802
DdeI	CTNAG	3 cut(s)	39, 1630, 1847
DpnI	GATC	9 cut(s)	24, 475, 619, 744, 1128, 1274, 1505, 1649, 1872
DpnII	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
DraI	TTTAAA	3 cut(s)	945, 1102, 1177
EaeI	YGGCCR	1 cut(s)	294
Eco130I	CCWWGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
Eco147I	AGGCCT	1 cut(s)	816
Eco31I	GGTCTC	1 cut(s)	766
Eco47I	GGWCC	2 cut(s)	565, 1456
EcoO109I	RGGNCCY	1 cut(s)	1456
EcoT14I	CCWWGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
ErhI	CCWWGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
FalI	AAGNNNNNCTT	2 cut(s)	1272, 1304
FaqI	GGGAC	1 cut(s)	1469
FblI	GTMKAC	1 cut(s)	198
Fnu4HI	GCNGC	7 cut(s)	654, 958, 1258, 1305, 1908, 1999, 2002
FokI	GGATG	1 cut(s)	590
Fsp4HI	GCNGC	7 cut(s)	654, 958, 1258, 1305, 1908, 1999, 2002
FspBI	CTAG	4 cut(s)	665, 746, 969, 1079
GluI	GCNGC	7 cut(s)	654, 958, 1258, 1305, 1908, 1999, 2002
GsuI	CTGGAG	2 cut(s)	1398, 1884
HaeIII	GGCC	4 cut(s)	296, 816, 1012, 1546
HapII	CCGG	2 cut(s)	388, 1014
HincII	GTYRAC	2 cut(s)	199, 1351
HindII	GTYRAC	2 cut(s)	199, 1351
HindIII	AAGCTT	3 cut(s)	320, 700, 1844
HinfI	GANTC	4 cut(s)	125, 595, 1048, 1373
HpaII	CCGG	2 cut(s)	388, 1014
HphI	GGTGA	5 cut(s)	437, 730, 1018, 1256, 1657
Hpy166II	GTNNAC	5 cut(s)	199, 364, 721, 1247, 1351
Hpy188I	TCNGA	5 cut(s)	569, 622, 766, 778, 812
Hpy8I	GTNNAC	5 cut(s)	199, 364, 721, 1247, 1351
Hpy99I	CGWCG	1 cut(s)	203
HpyAV	CCTTC	6 cut(s)	58, 84, 384, 422, 676, 1784
HpyCH4III	ACNGT	7 cut(s)	639, 855, 1123, 1642, 1717, 1738, 1884
HpyCH4V	TGCA	8 cut(s)	116, 276, 505, 1164, 1304, 1427, 1604, 2009
HpyF10VI	GCNNNNNNNGC	4 cut(s)	149, 650, 659, 1904
HpyF3I	CTNAG	3 cut(s)	39, 1630, 1847
Kzo9I	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
LmnI	GCTCC	3 cut(s)	389, 1731, 1761
Lsp1109I	GCAGC	6 cut(s)	640, 969, 1269, 1316, 1894, 2010
LweI	GCATC	2 cut(s)	640, 1291
MaeI	CTAG	4 cut(s)	665, 746, 969, 1079
MaeIII	GTNAC	6 cut(s)	490, 989, 1117, 1150, 1465, 1551
MalI	GATC	9 cut(s)	24, 475, 619, 744, 1128, 1274, 1505, 1649, 1872
MboI	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
MboII	GAAGA	8 cut(s)	477, 827, 849, 1202, 1420, 1544, 1788, 1880
MflI	RGATCY	3 cut(s)	473, 1126, 1870
MhlI	GDGCHC	3 cut(s)	189, 262, 664
MlsI	TGGCCA	1 cut(s)	296
MluNI	TGGCCA	1 cut(s)	296
MlyI	GAGTC	1 cut(s)	119
MmeI	TCCRAC	4 cut(s)	623, 886, 1291, 1753
MnlI	CCTC	9 cut(s)	208, 297, 806, 893, 1258, 1557, 1679, 1769, 2043
Mox20I	TGGCCA	1 cut(s)	296
MroXI	GAANNNNTTC	2 cut(s)	1536, 1937
MscI	TGGCCA	1 cut(s)	296
MseI	TTAA	8 cut(s)	237, 521, 609, 840, 944, 1101, 1176, 1712
MslI	CAYNNNNRTG	2 cut(s)	338, 1145
Msp20I	TGGCCA	1 cut(s)	296
MspA1I	CMGCKG	3 cut(s)	960, 1253, 2001
MspI	CCGG	2 cut(s)	388, 1014
MspR9I	CCNGG	2 cut(s)	388, 1014
MvnI	CGCG	1 cut(s)	1611
MwoI	GCNNNNNNNGC	4 cut(s)	149, 650, 659, 1904
NciI	CCSGG	2 cut(s)	388, 1014
NcoI	CCATGG	5 cut(s)	669, 1057, 1146, 1593, 1968
NdeII	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
NlaIV	GGNNCC	7 cut(s)	45, 385, 475, 566, 1128, 1395, 1457
NmuCI	GTSAC	5 cut(s)	490, 989, 1117, 1150, 1551
NspI	RCATGY	2 cut(s)	370, 505
NspV	TTCGAA	1 cut(s)	62
PagI	TCATGA	2 cut(s)	333, 1929
PceI	AGGCCT	1 cut(s)	816
PciI	ACATGT	1 cut(s)	366
PdmI	GAANNNNTTC	2 cut(s)	1536, 1937
PfeI	GAWTC	3 cut(s)	595, 1048, 1373
PkrI	GCNGC	7 cut(s)	655, 959, 1259, 1306, 1909, 2000, 2003
PleI	GAGTC	1 cut(s)	119
PpsI	GAGTC	1 cut(s)	119
PpuMI	RGGWCCY	1 cut(s)	1456
PscI	ACATGT	1 cut(s)	366
PshBI	ATTAAT	1 cut(s)	237
PsiI	TTATAA	1 cut(s)	689
Psp5II	RGGWCCY	1 cut(s)	1456
PspN4I	GGNNCC	7 cut(s)	45, 385, 475, 566, 1128, 1395, 1457
PspPI	GGNCC	4 cut(s)	565, 1011, 1456, 1544
PspPPI	RGGWCCY	1 cut(s)	1456
PstI	CTGCAG	1 cut(s)	278
PstNI	CAGNNNCTG	1 cut(s)	1376
PsuI	RGATCY	3 cut(s)	473, 1126, 1870
PvuII	CAGCTG	1 cut(s)	1253
RsaI	GTAC	4 cut(s)	220, 363, 1567, 1803
RsaNI	GTAC	4 cut(s)	219, 362, 1566, 1802
RseI	CAYNNNNRTG	2 cut(s)	338, 1145
SalI	GTCGAC	1 cut(s)	197
SaqAI	TTAA	8 cut(s)	237, 521, 609, 840, 944, 1101, 1176, 1712
SatI	GCNGC	7 cut(s)	654, 958, 1258, 1305, 1908, 1999, 2002
Sau3AI	GATC	9 cut(s)	22, 473, 617, 742, 1126, 1272, 1503, 1647, 1870
Sau96I	GGNCC	4 cut(s)	565, 1011, 1456, 1544
SchI	GAGTC	1 cut(s)	119
ScrFI	CCNGG	2 cut(s)	388, 1014
SduI	GDGCHC	3 cut(s)	189, 262, 664
SfaNI	GCATC	2 cut(s)	640, 1291
SfcI	CTRYAG	2 cut(s)	274, 851
SfuI	TTCGAA	1 cut(s)	62
SinI	GGWCC	2 cut(s)	565, 1456
SmiI	ATTTAAAT	1 cut(s)	945
SmiMI	CAYNNNNRTG	2 cut(s)	338, 1145
SmlI	CTYRAG	3 cut(s)	132, 1278, 1760
SmoI	CTYRAG	3 cut(s)	132, 1278, 1760
SseBI	AGGCCT	1 cut(s)	816
SsiI	CCGC	2 cut(s)	960, 2001
SspMI	CTAG	4 cut(s)	665, 746, 969, 1079
StuI	AGGCCT	1 cut(s)	816
StyD4I	CCNGG	2 cut(s)	386, 1012
StyI	CCWWGG	7 cut(s)	399, 669, 994, 1057, 1146, 1593, 1968
SwaI	ATTTAAAT	1 cut(s)	945
TaaI	ACNGT	7 cut(s)	639, 855, 1123, 1642, 1717, 1738, 1884
TaqI	TCGA	3 cut(s)	62, 198, 1188
TatI	WGTACW	2 cut(s)	361, 1801
TauI	GCSGC	1 cut(s)	2004
TfiI	GAWTC	3 cut(s)	595, 1048, 1373
Tru1I	TTAA	8 cut(s)	237, 521, 609, 840, 944, 1101, 1176, 1712
Tru9I	TTAA	8 cut(s)	237, 521, 609, 840, 944, 1101, 1176, 1712
TscAI	CASTG	9 cut(s)	189, 283, 304, 644, 745, 994, 1092, 1128, 1159
TseFI	GTSAC	5 cut(s)	490, 989, 1117, 1150, 1551
TseI	GCWGC	6 cut(s)	653, 957, 1257, 1304, 1907, 1998
Tsp45I	GTSAC	5 cut(s)	490, 989, 1117, 1150, 1551
TspGWI	ACGGA	1 cut(s)	1539
TspRI	CASTG	9 cut(s)	189, 283, 304, 644, 745, 994, 1092, 1128, 1159
VpaK11BI	GGWCC	2 cut(s)	565, 1456
VspI	ATTAAT	1 cut(s)	237
XbaI	TCTAGA	1 cut(s)	745
XceI	RCATGY	2 cut(s)	370, 505
XmiI	GTMKAC	1 cut(s)	198
XmnI	GAANNNNTTC	2 cut(s)	1536, 1937
XspI	CTAG	4 cut(s)	665, 746, 969, 1079

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.