Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003863.1

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Reverse (-)

53049 .. 57594

Gene Structure 4546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003863.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

atggcacaaaacaaaaccactactacaataccggtgaacgtgggtgttgttcttgatataaatcaggactatgggaagatttggttgagttgcatcaaactggcgctctcagacttctatggatcgcatgctcactacaaaacaaggctggtcttgaacattagggactccgagaacaacgttgtacgggcagctgatgcagctctagatttgataatgaatacacaagtggaagccattttaggacccgtgacatcgatggatgcgagctttgttattaatctgggcgaccaagctcaagtgccaattatttcattttctgcatcaagcccatctcttacttcactccgcagctcctactttttccaaattacacagattgactcatcccaggtgaatgccataagtgctatcgttcacaattttggatggagacaagttgtagccatatatgtagacacagaatacggagaaggagtcataccttttctaactgatgcattgcaagaggttgatgttggtgtcacctatcgaagtgcaatttccccattagccaccgatgatcaaattcttcaagaactatacaagttaatgaccatgcaaactagagtctttattgtgcatatgaatccgaatctcggttctaggctctttgccaaggcaaaagagattggaatgatgagtcaaggatatgtctggatcatgactaatgggttagccaatcggttaacatcgatgaattctacagtcataaattccatgcaaggtgcactaggtgtacaaacatactttgctcagacaatggagcttgaagaattcaacttccggtggaagcaacaattcctgaaagaccatccaactctcattgatgctgaattggatatcttagcactatgggcatatgatgcagctttcgcactagccatggcaatcgaagaagtggggatcacaagtactgtcgacttattccgaacgaaaaaatcctccttcaatttgacagatcttgagaacattgagatttccaagtatggtacggacctctgccgaaccctttcgatgactagatttgaaggcatggctggaaatttctacattgttgatggtcaacttcagtcatcaacctttcgtatagtgaatataaatgaggatggagcaagagatattggattttggacaccacaaaatggactcgtgaacaaattgaattcggcaaacacaagcatactttcaactaattcgaagtccaaccttaaagctagcgttatatggcctggagattctctctcttttcccaagggatgggagatcccaacaaatggcagaaagttgagaataggagttcctgttaatgtcggtgttcctgagtttgttaaggtcacaaaagatccaagcacacttacaactgaagtcacagggttttctattgacgtctttaaggctgcaacagaggtattgccatattctcttccgtatgagttcattccctttgaaaatcctactggctccattgccgcaacttacaacgatttgtgctatcaagtatatcttgggggagaaaacgtgggatataggagcactgcttatacttatgatctattgaaacaagtaggttttgacgattccaagctcaaaggctttacaactgttgaagaaattcaggaagctctttcaaaagggagcccaaatggtggtatttctgcttttgttgacgaaaccccatacacgaagcttcttgtagccaaatattgtttgaaatttaccatggttggacctatcttcaaaactgttgggtttggctttgtgttcccaaaacgttcccctcttgtacctgacgtatcacaagcggtgctaaacgtgaccgaaggagagaagatattgaacattgaaaacaaatggttcaataaacaagaaagcaattgtcaagactctagtacccaaccagtttccagcaacagtcttgggcttgccagtttttggggtttattcttgattgcggggctggcttccatactcgcactcatcatctttataatttgctttctttacgagcatagaaatatgattccctctgactcgggtgcctctagatggagaaggttgcagatcatgttcgaaatcttcaatcaaaaggaccttgactctcatacttttaaaacaagtcgacaacgagattcagttcaagccccagtaagtaacaccttcgacgtagtcgactacaattcaaaccagacagagatacattccgtatcttttgaagaacaagaaataccatcaactgatcaagactcgatagaagtagccactgaggttgctattacaattcaagaaatccaagcaactactcttgtataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

783

Amino Acids

86.91

Weight (kDa)

4.88

Isoelectric Point (pI)

40.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2030
AatII	GACGTC	1 cut(s)	1431
AccB1I	GGYRCC	1 cut(s)	2078
AccB7I	CCANNNNNTGG	5 cut(s)	1184, 1299, 1316, 1688, 1974
AccI	GTMKAC	4 cut(s)	456, 960, 2161, 2211
AciI	CCGC	4 cut(s)	349, 1512, 1844, 1994
AclI	AACGTT	2 cut(s)	180, 1813
AclWI	GGATC	5 cut(s)	130, 707, 953, 1300, 1379
AcsI	RAATTY	8 cut(s)	567, 739, 754, 815, 1084, 1204, 1653, 1754
AcuI	CTGAAG	2 cut(s)	1094, 1425
AcyI	GRCGYC	1 cut(s)	1428
AdeI	CACNNNGTG	1 cut(s)	776
AfaI	GTAC	6 cut(s)	186, 780, 955, 1033, 1827, 1933
AfiI	CCNNNNNNNGG	7 cut(s)	638, 1184, 1299, 1316, 1688, 1974, 2088
AgeI	ACCGGT	1 cut(s)	31
AjnI	CCWGG	2 cut(s)	390, 1270
Alw21I	GWGCWC	2 cut(s)	772, 1577
Alw26I	GTCTC	1 cut(s)	427
Alw44I	GTGCAC	1 cut(s)	768
AlwI	GGATC	5 cut(s)	130, 707, 953, 1300, 1379
Ama87I	CYCGRG	1 cut(s)	2074
AoxI	GGCC	1 cut(s)	1268
ApaLI	GTGCAC	1 cut(s)	768
ApeKI	GCWGC	5 cut(s)	191, 200, 351, 908, 1439
ApoI	RAATTY	8 cut(s)	567, 739, 754, 815, 1084, 1204, 1653, 1754
AseI	ATTAAT	1 cut(s)	279
AsiGI	ACCGGT	1 cut(s)	31
Asp700I	GAANNNNTTC	2 cut(s)	1051, 1653
AspLEI	GCGC	1 cut(s)	106
AspS9I	GGNCC	4 cut(s)	245, 1036, 1769, 2131
AsuHPI	GGTGA	3 cut(s)	46, 406, 517
AsuII	TTCGAA	2 cut(s)	1238, 2112
AsuNHI	GCTAGC	1 cut(s)	1256
AvaI	CYCGRG	1 cut(s)	2074
AvaII	GGWCC	4 cut(s)	245, 1036, 1769, 2131
BaeGI	GKGCMC	1 cut(s)	772
BaeI	ACNNNNGTAYC	2 cut(s)	1915, 1948
BanI	GGYRCC	1 cut(s)	2078
BanII	GRGCYC	1 cut(s)	1682
BarI	GAAGNNNNNNTAC	2 cut(s)	465, 497
BauI	CACGAG	1 cut(s)	1190
Bbv12I	GWGCWC	2 cut(s)	772, 1577
BbvI	GCAGC	5 cut(s)	203, 212, 363, 920, 1426
BccI	CCATC	9 cut(s)	253, 340, 423, 861, 1094, 1142, 1293, 2082, 2278
BciT130I	CCWGG	2 cut(s)	392, 1272
BclI	TGATCA	2 cut(s)	562, 2278
BcoDI	GTCTC	1 cut(s)	427
BfaI	CTAG	9 cut(s)	206, 606, 645, 773, 920, 1062, 1257, 1929, 2085
BfmI	CTRYAG	1 cut(s)	744
BfoI	RGCGCY	1 cut(s)	107
BglII	AGATCT	1 cut(s)	1000
BisI	GCNGC	6 cut(s)	192, 201, 352, 909, 1440, 1512
BlsI	GCNGC	6 cut(s)	193, 202, 353, 910, 1441, 1513
BmcAI	AGTACT	1 cut(s)	955
Bme1390I	CCNGG	2 cut(s)	392, 1272
Bme18I	GGWCC	4 cut(s)	245, 1036, 1769, 2131
BmeT110I	CYCGRG	1 cut(s)	2074
BmgT120I	GGNCC	4 cut(s)	245, 1036, 1769, 2131
BmiI	GGNNCC	4 cut(s)	247, 1504, 1679, 2080
BmrFI	CCNGG	2 cut(s)	392, 1272
BmrI	ACTGGG	1 cut(s)	2180
BmsI	GCATC	7 cut(s)	102, 187, 253, 332, 487, 859, 895
BmtI	GCTAGC	1 cut(s)	1260
BmuI	ACTGGG	1 cut(s)	2180
BplI	GAGNNNNNCTC	2 cut(s)	1266, 1298
BpmI	CTGGAG	1 cut(s)	1293
Bpu14I	TTCGAA	2 cut(s)	1238, 2112
BpuEI	CTTGAG	2 cut(s)	282, 1025
Bsa29I	ATCGAT	2 cut(s)	257, 734
BsaBI	GATNNNNATC	1 cut(s)	60
BsaHI	GRCGYC	1 cut(s)	1428
BsaJI	CCNNGG	5 cut(s)	390, 657, 924, 1293, 1761
BsaWI	WCCGGW	2 cut(s)	31, 825
BsaXI	ACNNNNNCTCC	6 cut(s)	462, 492, 1329, 1359, 1545, 1575
Bsc4I	CCNNNNNNNGG	7 cut(s)	638, 1184, 1299, 1316, 1688, 1974, 2088
Bse118I	RCCGGY	1 cut(s)	31
Bse1I	ACTGG	5 cut(s)	105, 1504, 1940, 1968, 2186
Bse3DI	GCAATG	2 cut(s)	500, 1506
Bse8I	GATNNNNATC	1 cut(s)	60
BseBI	CCWGG	2 cut(s)	392, 1272
BseCI	ATCGAT	2 cut(s)	257, 734
BseDI	CCNNGG	5 cut(s)	390, 657, 924, 1293, 1761
BseGI	GGATG	6 cut(s)	268, 386, 434, 853, 1153, 1304
BseJI	GATNNNNATC	1 cut(s)	60
BseLI	CCNNNNNNNGG	7 cut(s)	638, 1184, 1299, 1316, 1688, 1974, 2088
BseMI	GCAATG	2 cut(s)	500, 1506
BseMII	CTCAG	4 cut(s)	123, 809, 1353, 2295
BseNI	ACTGG	5 cut(s)	105, 1504, 1940, 1968, 2186
BseSI	GKGCMC	1 cut(s)	772
BseXI	GCAGC	5 cut(s)	203, 212, 363, 920, 1426
BshFI	GGCC	1 cut(s)	1270
BshNI	GGYRCC	1 cut(s)	2078
BshTI	ACCGGT	1 cut(s)	31
BshVI	ATCGAT	2 cut(s)	257, 734
BsiHKAI	GWGCWC	2 cut(s)	772, 1577
BsiHKCI	CYCGRG	1 cut(s)	2074
BsiSI	CCGG	2 cut(s)	32, 826
BslFI	GGGAC	1 cut(s)	179
BslI	CCNNNNNNNGG	7 cut(s)	638, 1184, 1299, 1316, 1688, 1974, 2088
BsmAI	GTCTC	1 cut(s)	427
BsmFI	GGGAC	1 cut(s)	179
BsmI	GAATGC	1 cut(s)	403
BsnI	GGCC	1 cut(s)	1270
BsoBI	CYCGRG	1 cut(s)	2074
Bsp119I	TTCGAA	2 cut(s)	1238, 2112
Bsp1286I	GDGCHC	3 cut(s)	772, 1577, 1682
Bsp1407I	TGTACA	1 cut(s)	778
Bsp19I	CCATGG	2 cut(s)	924, 1761
BspACI	CCGC	4 cut(s)	349, 1512, 1844, 1994
BspANI	GGCC	1 cut(s)	1270
BspCNI	CTCAG	4 cut(s)	122, 808, 1354, 2296
BspDI	ATCGAT	2 cut(s)	257, 734
BspHI	TCATGA	1 cut(s)	702
BspLI	GGNNCC	4 cut(s)	247, 1504, 1679, 2080
BspOI	GCTAGC	1 cut(s)	1260
BspPI	GGATC	5 cut(s)	130, 707, 953, 1300, 1379
BspT104I	TTCGAA	2 cut(s)	1238, 2112
BspT107I	GGYRCC	1 cut(s)	2078
BsrDI	GCAATG	2 cut(s)	500, 1506
BsrFI	RCCGGY	1 cut(s)	31
BsrGI	TGTACA	1 cut(s)	778
BsrI	ACTGG	5 cut(s)	105, 1504, 1940, 1968, 2186
BssAI	RCCGGY	1 cut(s)	31
BssECI	CCNNGG	5 cut(s)	390, 657, 924, 1293, 1761
BssNI	GRCGYC	1 cut(s)	1428
BssSI	CACGAG	1 cut(s)	1190
BssT1I	CCWWGG	4 cut(s)	657, 924, 1293, 1761
Bst2BI	CACGAG	1 cut(s)	1190
Bst2UI	CCWGG	2 cut(s)	392, 1272
Bst4CI	ACNGT	5 cut(s)	748, 958, 1645, 1786, 1955
Bst6I	CTCTTC	1 cut(s)	1470
BstACI	GRCGYC	1 cut(s)	1428
BstAPI	GCANNNNNTGC	2 cut(s)	197, 905
BstAUI	TGTACA	1 cut(s)	778
BstBI	TTCGAA	2 cut(s)	1238, 2112
BstC8I	GCNNGC	5 cut(s)	129, 268, 1258, 1965, 2001
BstDEI	CTNAG	5 cut(s)	109, 795, 886, 1362, 2304
BstDSI	CCRYGG	2 cut(s)	924, 1761
BstF5I	GGATG	6 cut(s)	268, 386, 434, 853, 1153, 1304
BstH2I	RGCGCY	1 cut(s)	107
BstHHI	GCGC	1 cut(s)	106
BstMAI	GTCTC	1 cut(s)	427
BstMWI	GCNNNNNNNGC	7 cut(s)	197, 200, 407, 896, 905, 914, 2000
BstNI	CCWGG	2 cut(s)	392, 1272
BstNSI	RCATGY	1 cut(s)	131
BstSCI	CCNGG	2 cut(s)	390, 1270
BstSFI	CTRYAG	1 cut(s)	744
BstSLI	GKGCMC	1 cut(s)	772
BstV1I	GCAGC	5 cut(s)	203, 212, 363, 920, 1426
BstX2I	RGATCY	3 cut(s)	1000, 1305, 1384
BstYI	RGATCY	3 cut(s)	1000, 1305, 1384
Bsu15I	ATCGAT	2 cut(s)	257, 734
BsuRI	GGCC	1 cut(s)	1270
BsuTUI	ATCGAT	2 cut(s)	257, 734
BtgI	CCRYGG	2 cut(s)	924, 1761
BtsCI	GGATG	6 cut(s)	268, 386, 434, 853, 1153, 1304
BtsI	GCAGTG	1 cut(s)	1575
BtsIMutI	CAGTG	2 cut(s)	1575, 2301
Cac8I	GCNNGC	5 cut(s)	129, 268, 1258, 1965, 2001
CciI	TCATGA	1 cut(s)	702
CfoI	GCGC	1 cut(s)	106
Cfr10I	RCCGGY	1 cut(s)	31
Cfr13I	GGNCC	4 cut(s)	245, 1036, 1769, 2131
ClaI	ATCGAT	2 cut(s)	257, 734
Csp6I	GTAC	6 cut(s)	185, 779, 954, 1032, 1826, 1932
CspAI	ACCGGT	1 cut(s)	31
CspCI	CAANNNNNGTGG	2 cut(s)	2290, 2325
CviAII	CATG	8 cut(s)	128, 598, 703, 760, 925, 1075, 1762, 2107
CviQI	GTAC	6 cut(s)	185, 779, 954, 1032, 1826, 1932
DdeI	CTNAG	5 cut(s)	109, 795, 886, 1362, 2304
DraI	TTTAAA	1 cut(s)	2152
DraIII	CACNNNGTG	1 cut(s)	776
Eam1104I	CTCTTC	1 cut(s)	1470
EarI	CTCTTC	1 cut(s)	1470
Eco130I	CCWWGG	4 cut(s)	657, 924, 1293, 1761
Eco24I	GRGCYC	1 cut(s)	1682
Eco32I	GATATC	1 cut(s)	883
Eco47I	GGWCC	4 cut(s)	245, 1036, 1769, 2131
Eco57I	CTGAAG	2 cut(s)	1094, 1425
Eco88I	CYCGRG	1 cut(s)	2074
EcoO109I	RGGNCCY	2 cut(s)	245, 2131
EcoRI	GAATTC	3 cut(s)	739, 815, 1204
EcoRII	CCWGG	2 cut(s)	390, 1270
EcoRV	GATATC	1 cut(s)	883
EcoT14I	CCWWGG	4 cut(s)	657, 924, 1293, 1761
EcoT22I	ATGCAT	1 cut(s)	502
EcoT38I	GRGCYC	1 cut(s)	1682
ErhI	CCWWGG	4 cut(s)	657, 924, 1293, 1761
FaeI	CATG	8 cut(s)	131, 601, 706, 763, 928, 1078, 1765, 2110
FalI	AAGNNNNNCTT	2 cut(s)	1530, 1562
FaqI	GGGAC	1 cut(s)	179
FatI	CATG	8 cut(s)	127, 597, 702, 759, 924, 1074, 1761, 2106
FauI	CCCGC	1 cut(s)	1987
FauNDI	CATATG	2 cut(s)	624, 901
FbaI	TGATCA	2 cut(s)	562, 2278
FblI	GTMKAC	4 cut(s)	456, 960, 2161, 2211
Fnu4HI	GCNGC	6 cut(s)	192, 201, 352, 909, 1440, 1512
FokI	GGATG	6 cut(s)	275, 373, 441, 840, 1160, 1311
FriOI	GRGCYC	1 cut(s)	1682
Fsp4HI	GCNGC	6 cut(s)	192, 201, 352, 909, 1440, 1512
FspBI	CTAG	9 cut(s)	206, 606, 645, 773, 920, 1062, 1257, 1929, 2085
GlaI	GCGC	1 cut(s)	105
GluI	GCNGC	6 cut(s)	192, 201, 352, 909, 1440, 1512
GsuI	CTGGAG	1 cut(s)	1293
HaeII	RGCGCY	1 cut(s)	107
HaeIII	GGCC	1 cut(s)	1270
HapII	CCGG	2 cut(s)	32, 826
HhaI	GCGC	1 cut(s)	106
Hin1I	GRCGYC	1 cut(s)	1428
Hin1II	CATG	8 cut(s)	131, 601, 706, 763, 928, 1078, 1765, 2110
Hin6I	GCGC	1 cut(s)	104
HinP1I	GCGC	1 cut(s)	104
HincII	GTYRAC	6 cut(s)	729, 961, 1106, 1708, 2162, 2212
HindII	GTYRAC	6 cut(s)	729, 961, 1106, 1708, 2162, 2212
HindIII	AAGCTT	1 cut(s)	1727
HpaI	GTTAAC	1 cut(s)	729
HpaII	CCGG	2 cut(s)	32, 826
HphI	GGTGA	3 cut(s)	46, 406, 517
Hpy188I	TCNGA	6 cut(s)	112, 172, 633, 798, 971, 2071
Hpy99I	CGWCG	1 cut(s)	2207
HpyAV	CCTTC	6 cut(s)	467, 997, 1064, 1856, 2088, 2209
HpyCH4III	ACNGT	5 cut(s)	748, 958, 1645, 1786, 1955
HpyCH4IV	ACGT	8 cut(s)	39, 180, 1428, 1560, 1813, 1833, 1854, 2205
HpyF10VI	GCNNNNNNNGC	7 cut(s)	197, 200, 407, 896, 905, 914, 2000
HpyF3I	CTNAG	5 cut(s)	109, 795, 886, 1362, 2304
HpySE526I	ACGT	8 cut(s)	39, 180, 1428, 1560, 1813, 1833, 1854, 2205
Hsp92I	GRCGYC	1 cut(s)	1428
Hsp92II	CATG	8 cut(s)	131, 601, 706, 763, 928, 1078, 1765, 2110
HspAI	GCGC	1 cut(s)	104
Ksp22I	TGATCA	2 cut(s)	562, 2278
KspAI	GTTAAC	1 cut(s)	729
LmnI	GCTCC	6 cut(s)	359, 805, 1151, 1508, 1572, 1677
Lsp1109I	GCAGC	5 cut(s)	203, 212, 363, 920, 1426
LweI	GCATC	7 cut(s)	102, 187, 253, 332, 487, 859, 895
MaeI	CTAG	9 cut(s)	206, 606, 645, 773, 920, 1062, 1257, 1929, 2085
MaeII	ACGT	8 cut(s)	39, 180, 1428, 1560, 1813, 1833, 1854, 2205
MaeIII	GTNAC	6 cut(s)	250, 523, 1375, 1408, 1855, 2192
MfeI	CAATTG	1 cut(s)	1915
MflI	RGATCY	3 cut(s)	1000, 1305, 1384
MhlI	GDGCHC	3 cut(s)	772, 1577, 1682
MmeI	TCCRAC	3 cut(s)	881, 1269, 1747
MnlI	CCTC	9 cut(s)	502, 994, 1049, 1138, 1441, 1830, 2077, 2092, 2299
Mph1103I	ATGCAT	1 cut(s)	502
MroXI	GAANNNNTTC	2 cut(s)	1051, 1653
MseI	TTAA	8 cut(s)	279, 590, 728, 1251, 1347, 1371, 1434, 2151
MspA1I	CMGCKG	1 cut(s)	194
MspI	CCGG	2 cut(s)	32, 826
MspR9I	CCNGG	2 cut(s)	392, 1272
MunI	CAATTG	1 cut(s)	1915
Mva1269I	GAATGC	1 cut(s)	403
MvaI	CCWGG	2 cut(s)	392, 1272
MwoI	GCNNNNNNNGC	7 cut(s)	197, 200, 407, 896, 905, 914, 2000
NcoI	CCATGG	2 cut(s)	924, 1761
NdeI	CATATG	2 cut(s)	624, 901
NheI	GCTAGC	1 cut(s)	1256
NlaIII	CATG	8 cut(s)	131, 601, 706, 763, 928, 1078, 1765, 2110
NlaIV	GGNNCC	4 cut(s)	247, 1504, 1679, 2080
NmuCI	GTSAC	5 cut(s)	250, 523, 1375, 1408, 1855
NsiI	ATGCAT	1 cut(s)	502
NspI	RCATGY	1 cut(s)	131
NspV	TTCGAA	2 cut(s)	1238, 2112
PaeI	GCATGC	1 cut(s)	131
PagI	TCATGA	1 cut(s)	702
PcsI	WCGNNNNNNNCGW	2 cut(s)	263, 2208
PctI	GAATGC	1 cut(s)	403
PdmI	GAANNNNTTC	2 cut(s)	1051, 1653
PfeI	GAWTC	6 cut(s)	628, 634, 1277, 1619, 2062, 2171
PflFI	GACNNNGTC	1 cut(s)	2207
PflMI	CCANNNNNTGG	5 cut(s)	1184, 1299, 1316, 1688, 1974
PinAI	ACCGGT	1 cut(s)	31
PkrI	GCNGC	6 cut(s)	193, 202, 353, 910, 1441, 1513
PpuMI	RGGWCCY	2 cut(s)	245, 2131
PshBI	ATTAAT	1 cut(s)	279
PsiI	TTATAA	1 cut(s)	2030
Psp1406I	AACGTT	2 cut(s)	180, 1813
Psp5II	RGGWCCY	2 cut(s)	245, 2131
Psp6I	CCWGG	2 cut(s)	390, 1270
PspGI	CCWGG	2 cut(s)	390, 1270
PspN4I	GGNNCC	4 cut(s)	247, 1504, 1679, 2080
PspPI	GGNCC	4 cut(s)	245, 1036, 1769, 2131
PspPPI	RGGWCCY	2 cut(s)	245, 2131
PsrI	GAACNNNNNNTAC	2 cut(s)	2250, 2282
PsuI	RGATCY	3 cut(s)	1000, 1305, 1384
PsyI	GACNNNGTC	1 cut(s)	2207
PvuII	CAGCTG	1 cut(s)	194
RsaI	GTAC	6 cut(s)	186, 780, 955, 1033, 1827, 1933
RsaNI	GTAC	6 cut(s)	185, 779, 954, 1032, 1826, 1932
SalI	GTCGAC	3 cut(s)	959, 2160, 2210
SaqAI	TTAA	8 cut(s)	279, 590, 728, 1251, 1347, 1371, 1434, 2151
SatI	GCNGC	6 cut(s)	192, 201, 352, 909, 1440, 1512
Sau96I	GGNCC	4 cut(s)	245, 1036, 1769, 2131
ScaI	AGTACT	1 cut(s)	955
ScrFI	CCNGG	2 cut(s)	392, 1272
SduI	GDGCHC	3 cut(s)	772, 1577, 1682
SfaNI	GCATC	7 cut(s)	102, 187, 253, 332, 487, 859, 895
SfcI	CTRYAG	1 cut(s)	744
SfuI	TTCGAA	2 cut(s)	1238, 2112
SinI	GGWCC	4 cut(s)	245, 1036, 1769, 2131
SmlI	CTYRAG	2 cut(s)	297, 1004
SmoI	CTYRAG	2 cut(s)	297, 1004
SphI	GCATGC	1 cut(s)	131
SsiI	CCGC	4 cut(s)	349, 1512, 1844, 1994
SspI	AATATT	1 cut(s)	1745
SspMI	CTAG	9 cut(s)	206, 606, 645, 773, 920, 1062, 1257, 1929, 2085
StyD4I	CCNGG	2 cut(s)	390, 1270
StyI	CCWWGG	4 cut(s)	657, 924, 1293, 1761
TaaI	ACNGT	5 cut(s)	748, 958, 1645, 1786, 1955
TaiI	ACGT	8 cut(s)	42, 183, 1431, 1563, 1816, 1836, 1857, 2208
TaqII	GACCGA	1 cut(s)	1874
TatI	WGTACW	2 cut(s)	778, 953
TauI	GCSGC	1 cut(s)	1514
TfiI	GAWTC	6 cut(s)	628, 634, 1277, 1619, 2062, 2171
Tru1I	TTAA	8 cut(s)	279, 590, 728, 1251, 1347, 1371, 1434, 2151
Tru9I	TTAA	8 cut(s)	279, 590, 728, 1251, 1347, 1371, 1434, 2151
TscAI	CASTG	2 cut(s)	1582, 2308
TseFI	GTSAC	5 cut(s)	250, 523, 1375, 1408, 1855
TseI	GCWGC	5 cut(s)	191, 200, 351, 908, 1439
Tsp45I	GTSAC	5 cut(s)	250, 523, 1375, 1408, 1855
TspDTI	ATGAA	5 cut(s)	233, 303, 641, 752, 1468
TspGWI	ACGGA	4 cut(s)	483, 1049, 1458, 2233
TspRI	CASTG	2 cut(s)	1582, 2308
Tth111I	GACNNNGTC	1 cut(s)	2207
Van91I	CCANNNNNTGG	5 cut(s)	1184, 1299, 1316, 1688, 1974
VneI	GTGCAC	1 cut(s)	768
VpaK11BI	GGWCC	4 cut(s)	245, 1036, 1769, 2131
VspI	ATTAAT	1 cut(s)	279
XapI	RAATTY	8 cut(s)	567, 739, 754, 815, 1084, 1204, 1653, 1754
XbaI	TCTAGA	2 cut(s)	205, 2084
XceI	RCATGY	1 cut(s)	131
XmiI	GTMKAC	4 cut(s)	456, 960, 2161, 2211
XmnI	GAANNNNTTC	2 cut(s)	1051, 1653
XspI	CTAG	9 cut(s)	206, 606, 645, 773, 920, 1062, 1257, 1929, 2085
ZraI	GACGTC	1 cut(s)	1429
ZrmI	AGTACT	1 cut(s)	955
Zsp2I	ATGCAT	1 cut(s)	502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.