RLG00000022758

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
11745742 .. 11749086
3345 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022758

Sequence Viewer

Length: 2280 bp
ATGATGAACAAAAAGTACCCTTGCAACCTTTATAATAAGCTTTCTCTCATATCCATCTTTGTCTTGCTCCTTTCTTCATGGATTTCCTTGGCCATTCCACAAAACAGAACTATGATTCCAGTGGGGCTTGTTCTCGATGACTATAGTTCAGTGCGGGGCAGGATTTTGTTGAGTGTCTTCCAAATGGCCCTCTCCGACATCTCTGCTTATCACCCTAGCTACAAGACCAGACTGGTCTTGAAAACTGGGGAATCGAAAAAAAATGTTGTTGGGGCAGCTGCCGCTGCTCTAAATCTGATAAAGAATGAAGAAGTGCAAGTCATCATCGGGCCAGTGACATCAATGGAGACAAGCTTTGTCATCAATCTCGGAGACCAAACTCATGTGCCCATCATATCATTTTCAGCGACAAGTCCTTCGCTTACTTCCCTCCGGAGCTCCTACTTTTTCCAGTTTGCACAAAATGACACATCCCAAGTGAGAGCTATAAGTGCAGTCATTAACAATTACGGGTGGAGACAAGTTGTGCCTATATACATAGACACTTCGTACGGGGAGGCAGTCATACCATTCTTAACCGATGCCTTACAAGAGATAGGTGTAAGTGTCCCCTACCGGAGTGTGATTTCCCCCTCTGCAGCTGATGATCAAATTGCCAACGAGCTTTACAAGCTAATGGTCATGCAAACTAGAGTCTTCATTGTCCATATGACATCCGATCTAAGCTCTAAGCTATTTGCCAAGGCAGAAGAGATTGGAATGATGGTTGAAGGCTATGTTTGGCTAACCACAAGTGGAATAACTAATGGTTTAACATCACTGAACTCTTCAGTAATCCGTTCCATGAATGGAGCCATAGGTGTGCAAACTCATGTCCAAAAAACAGCAGAGCTAGAAGAATTCAAACTCCGGTGGAAAAGGCAATTCCAAAAGGACCATCCACTCATCGTTGGCGCTGAATTGGATGTTTTCGGATTTTGGGCTTATGATGCTACTTTTGCACTAGCAATGGCAATTGAACAAGTGATTGGCAATACAAGTAGTTTTGATTTCCAAAAGCCAAATGCCTCCAACAAGTCCACAGATATTCTTGACAGTTTTCCAATCTCTCCATATGGTCCAAAACTTTGCAAAGCCCTATCAACTACTAGATTCCCAGGCATTGCTGGAGATTTAATGCTCATTGATGGGCAACTTCAATCATCTAATTTTCGGATAATTAATGTCAACGGCCGTGGAGCAAGAACAATTGGATTTTGGACACCACACCATGGACTTGTTAGCAAAATGAATTATTCCACAAGCCATCTTGGACCTGTCATATGGCCAGGAGAGTCTCTCTCTGTTCCCAAAGGGTGGGAAATCCCAACAAAGGGCAAGAAGTTGAGAATAGGAGTTCCTGTAAAGGATGGGTTTTTCGAGCTTGTTAAGGTAACAAAAGATCCAACCAAGAACACAACGGATGTTACCGTATTCAGTATTGATGTGTTTAAGGCCGTAGTTGAGAAGTTGCCATATGCTATTTCGTATGACTTCATTCCTTTTGCAAAGCCTGATGGCACCCCAGCTGGCAATTACAATGATATGTGCTATCTAGTGTACCTTGGGGCAAAATTTCCGTCTTTAGTAAATGCAATAAATGAGAGAGTGGATAGCAACTTGGCTAGACTTGTTATGGGTATATGGATATTTGTTGTACTGGTGCTGACAAAAAATTACCAAGCAAGTCTAACCTCAATATATACGGTTGAAAAACTTGAGCCAACTATTACCAGTATCCAGGATATATTAAGGAAGGGGGAAAACATTGGCTATATAGCATCTTCTTTTACTTACGAGACGTTGAAGCAAGTAGGTTTTGAAGATTCCAAGCTTAGGGCTTTCGGAACTATGGAAGCAATTGACGATGCTCTTTCAAACAGTGGCATCGCTGGTTTTGTTGATGAAACACCCTATATGAAGCTTTTTCTTGCAAGATATTGCAACAAATATACCATGATTGGACCCATCTTCAAAACCGATGGATTTGGCTTTAGCAATTTAATTAGGGGGACGGGAGACCGGTTTCCAGACCCCAATTCTCATACTTTTAGAAGCCAGCAGCCGGATGTAGTTATAACCTTTCCAAACAACAATAGCCCAGAAAGTCCGGTACTCATCCAGAATTCAAACCACGCAAATACGAATTATGTATCTTCTGATTCTGATTCTGATTCTGGACAGCAACGAACATCTACTGAGTCTCCTGCTGAAGTTCATCGACTGATCAGCAATCACTGA

Protein Analysis

760

Amino Acids

83.94

Weight (kDa)

6.88

Isoelectric Point (pI)

30.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 53 - 344 4.5e-17 Periplasmic binding protein
ANF_receptor PF01094 58 - 411 6.3e-80 Receptor family ligand binding region
Lig_chan PF00060 540 - 687 1.4e-13 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 33, 2117
AccB1I GGYRCC 1 cut(s) 1559
AccB7I CCANNNNNTGG 2 cut(s) 1271, 1356
AccIII TCCGGA 1 cut(s) 432
AciI CCGC 2 cut(s) 154, 282
AclWI GGATC 1 cut(s) 1436
AcoI YGGCCR 3 cut(s) 90, 1231, 1325
AcsI RAATTY 3 cut(s) 899, 1613, 2164
AcuI CTGAAG 2 cut(s) 813, 2271
AfaI GTAC 5 cut(s) 17, 551, 1601, 1698, 2154
AfiI CCNNNNNNNGG 6 cut(s) 1271, 1356, 1372, 1373, 1875, 2104
AgeI ACCGGT 1 cut(s) 2061
AjnI CCWGG 3 cut(s) 1156, 1327, 1779
AjuI GAANNNNNNNTTGG 2 cut(s) 1011, 1043
AloI GAACNNNNNNTCC 2 cut(s) 100, 132
Alw21I GWGCWC 1 cut(s) 440
Alw26I GTCTC 7 cut(s) 341, 366, 511, 1341, 1832, 2052, 2247
AlwI GGATC 1 cut(s) 1436
Aor13HI TCCGGA 1 cut(s) 432
AoxI GGCC 6 cut(s) 90, 186, 329, 1231, 1325, 1494
ApeKI GCWGC 5 cut(s) 275, 278, 284, 638, 2101
ApoI RAATTY 3 cut(s) 899, 1613, 2164
ArsI GACNNNNNNTTYG 4 cut(s) 400, 432, 1604, 1636
AseI ATTAAT 1 cut(s) 1221
AsiGI ACCGGT 1 cut(s) 2061
AspLEI GCGC 1 cut(s) 956
AspS9I GGNCC 6 cut(s) 187, 329, 934, 1118, 1313, 2003
AsuHPI GGTGA 1 cut(s) 203
AvaII GGWCC 4 cut(s) 934, 1118, 1313, 2003
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 2 cut(s) 92, 1327
BanI GGYRCC 1 cut(s) 1559
BanII GRGCYC 1 cut(s) 440
BbsI GAAGAC 2 cut(s) 169, 688
Bbv12I GWGCWC 1 cut(s) 440
BbvI GCAGC 5 cut(s) 265, 271, 287, 650, 2113
BceAI ACGGC 3 cut(s) 1218, 1246, 1481
BcgI CGANNNNNNTGC 2 cut(s) 185, 219
BciT130I CCWGG 3 cut(s) 1158, 1329, 1781
BciVI GTATCC 1 cut(s) 1787
BclI TGATCA 2 cut(s) 646, 2265
BcoDI GTCTC 7 cut(s) 341, 366, 511, 1341, 1832, 2052, 2247
BfaI CTAG 7 cut(s) 216, 690, 893, 1004, 1149, 1595, 1665
BfmI CTRYAG 2 cut(s) 142, 636
BfoI RGCGCY 1 cut(s) 957
BfuI GTATCC 1 cut(s) 1787
BisI GCNGC 6 cut(s) 276, 279, 282, 285, 639, 2102
BlsI GCNGC 6 cut(s) 277, 280, 283, 286, 640, 2103
Bme1390I CCNGG 3 cut(s) 1158, 1329, 1781
Bme18I GGWCC 4 cut(s) 934, 1118, 1313, 2003
BmgT120I GGNCC 6 cut(s) 187, 329, 934, 1118, 1313, 2003
BmiI GGNNCC 3 cut(s) 853, 1561, 2005
BmrFI CCNGG 3 cut(s) 1158, 1329, 1781
BmrI ACTGGG 1 cut(s) 255
BmsI GCATC 5 cut(s) 571, 979, 1829, 1897, 1935
BmuI ACTGGG 1 cut(s) 255
BpiI GAAGAC 2 cut(s) 169, 688
BplI GAGNNNNNCTC 4 cut(s) 1323, 1355, 1325, 1357
BpmI CTGGAG 1 cut(s) 1188
Bpu10I CCTNAGC 1 cut(s) 1874
BpuEI CTTGAG 1 cut(s) 1778
BsaI GGTCTC 2 cut(s) 366, 2052
BsaJI CCNNGG 6 cut(s) 87, 741, 1156, 1234, 1270, 1603
BsaWI WCCGGW 5 cut(s) 432, 615, 909, 2061, 2149
BsaXI ACNNNNNCTCC 4 cut(s) 1386, 1416, 2227, 2257
Bsc4I CCNNNNNNNGG 6 cut(s) 1271, 1356, 1372, 1373, 1875, 2104
Bse118I RCCGGY 1 cut(s) 2061
Bse1I ACTGG 7 cut(s) 119, 237, 250, 332, 451, 1704, 1773
Bse3DI GCAATG 2 cut(s) 1014, 1161
BseAI TCCGGA 1 cut(s) 432
BseBI CCWGG 3 cut(s) 1158, 1329, 1781
BseDI CCNNGG 6 cut(s) 87, 741, 1156, 1234, 1270, 1603
BseGI GGATG 8 cut(s) 470, 713, 937, 970, 1414, 1468, 2113, 2157
BseLI CCNNNNNNNGG 6 cut(s) 1271, 1356, 1372, 1373, 1875, 2104
BseMI GCAATG 2 cut(s) 1014, 1161
BseMII CTCAG 1 cut(s) 2229
BseNI ACTGG 7 cut(s) 119, 237, 250, 332, 451, 1704, 1773
BseSI GKGCMC 1 cut(s) 390
BseX3I CGGCCG 1 cut(s) 1231
BseXI GCAGC 5 cut(s) 265, 271, 287, 650, 2113
BseYI CCCAGC 1 cut(s) 1564
BsgI GTGCAG 1 cut(s) 513
Bsh1285I CGRYCG 1 cut(s) 1234
BshFI GGCC 6 cut(s) 92, 188, 331, 1233, 1327, 1496
BshNI GGYRCC 1 cut(s) 1559
BshTI ACCGGT 1 cut(s) 2061
BsiEI CGRYCG 1 cut(s) 1234
BsiHKAI GWGCWC 1 cut(s) 440
BsiSI CCGG 6 cut(s) 433, 616, 910, 2062, 2105, 2150
BsiWI CGTACG 1 cut(s) 549
BslFI GGGAC 2 cut(s) 593, 2065
BslI CCNNNNNNNGG 6 cut(s) 1271, 1356, 1372, 1373, 1875, 2104
BsmAI GTCTC 7 cut(s) 341, 366, 511, 1341, 1832, 2052, 2247
BsmBI CGTCTC 1 cut(s) 1832
BsmFI GGGAC 2 cut(s) 593, 2065
BsnI GGCC 6 cut(s) 92, 188, 331, 1233, 1327, 1496
Bso31I GGTCTC 2 cut(s) 366, 2052
Bsp1286I GDGCHC 2 cut(s) 390, 440
Bsp13I TCCGGA 1 cut(s) 432
Bsp143I GATC 4 cut(s) 646, 718, 1441, 2265
Bsp19I CCATGG 1 cut(s) 1270
BspACI CCGC 2 cut(s) 154, 282
BspANI GGCC 6 cut(s) 92, 188, 331, 1233, 1327, 1496
BspCNI CTCAG 1 cut(s) 2230
BspEI TCCGGA 1 cut(s) 432
BspLI GGNNCC 3 cut(s) 853, 1561, 2005
BspMAI CTGCAG 1 cut(s) 640
BspPI GGATC 1 cut(s) 1436
BspT107I GGYRCC 1 cut(s) 1559
BspTNI GGTCTC 2 cut(s) 366, 2052
BsrDI GCAATG 2 cut(s) 1014, 1161
BsrFI RCCGGY 1 cut(s) 2061
BsrI ACTGG 7 cut(s) 119, 237, 250, 332, 451, 1704, 1773
BssAI RCCGGY 1 cut(s) 2061
BssECI CCNNGG 6 cut(s) 87, 741, 1156, 1234, 1270, 1603
BssMI GATC 4 cut(s) 646, 718, 1441, 2265
BssT1I CCWWGG 4 cut(s) 87, 741, 1270, 1603
Bst2UI CCWGG 3 cut(s) 1158, 1329, 1781
Bst4CI ACNGT 4 cut(s) 1097, 1471, 1747, 1922
Bst6I CTCTTC 2 cut(s) 744, 832
BstC8I GCNNGC 2 cut(s) 1570, 2099
BstDEI CTNAG 4 cut(s) 722, 729, 1874, 2238
BstDSI CCRYGG 2 cut(s) 1234, 1270
BstF5I GGATG 8 cut(s) 470, 713, 937, 970, 1414, 1468, 2113, 2157
BstH2I RGCGCY 1 cut(s) 957
BstHHI GCGC 1 cut(s) 956
BstKTI GATC 4 cut(s) 649, 721, 1444, 2268
BstMAI GTCTC 7 cut(s) 341, 366, 511, 1341, 1832, 2052, 2247
BstMBI GATC 4 cut(s) 646, 718, 1441, 2265
BstMCI CGRYCG 1 cut(s) 1234
BstMWI GCNNNNNNNGC 6 cut(s) 281, 284, 491, 670, 989, 998
BstNI CCWGG 3 cut(s) 1158, 1329, 1781
BstSCI CCNGG 3 cut(s) 1156, 1327, 1779
BstSFI CTRYAG 2 cut(s) 142, 636
BstSLI GKGCMC 1 cut(s) 390
BstV1I GCAGC 5 cut(s) 265, 271, 287, 650, 2113
BstV2I GAAGAC 2 cut(s) 169, 688
BstX2I RGATCY 1 cut(s) 1441
BstYI RGATCY 1 cut(s) 1441
BstZI CGGCCG 1 cut(s) 1231
BsuI GTATCC 1 cut(s) 1787
BsuRI GGCC 6 cut(s) 92, 188, 331, 1233, 1327, 1496
BtgI CCRYGG 2 cut(s) 1234, 1270
BtgZI GCGATG 1 cut(s) 1912
BtsCI GGATG 8 cut(s) 470, 713, 937, 970, 1414, 1468, 2113, 2157
BtsIMutI CAGTG 6 cut(s) 126, 156, 339, 818, 1927, 2275
Cac8I GCNNGC 2 cut(s) 1570, 2099
CfoI GCGC 1 cut(s) 956
Cfr10I RCCGGY 1 cut(s) 2061
Cfr13I GGNCC 6 cut(s) 187, 329, 934, 1118, 1313, 2003
Csp6I GTAC 5 cut(s) 16, 550, 1600, 1697, 2153
CspAI ACCGGT 1 cut(s) 2061
CspCI CAANNNNNGTGG 2 cut(s) 1216, 1251
CviAII CATG 7 cut(s) 78, 383, 682, 844, 872, 1271, 1996
CviQI GTAC 5 cut(s) 16, 550, 1600, 1697, 2153
DdeI CTNAG 4 cut(s) 722, 729, 1874, 2238
DpnI GATC 4 cut(s) 648, 720, 1443, 2267
DpnII GATC 4 cut(s) 646, 718, 1441, 2265
EaeI YGGCCR 3 cut(s) 90, 1231, 1325
EagI CGGCCG 1 cut(s) 1231
Eam1104I CTCTTC 2 cut(s) 744, 832
EarI CTCTTC 2 cut(s) 744, 832
Ecl136II GAGCTC 1 cut(s) 438
EclXI CGGCCG 1 cut(s) 1231
Eco130I CCWWGG 4 cut(s) 87, 741, 1270, 1603
Eco24I GRGCYC 1 cut(s) 440
Eco31I GGTCTC 2 cut(s) 366, 2052
Eco47I GGWCC 4 cut(s) 934, 1118, 1313, 2003
Eco52I CGGCCG 1 cut(s) 1231
Eco53kI GAGCTC 1 cut(s) 438
Eco57I CTGAAG 2 cut(s) 813, 2271
EcoICRI GAGCTC 1 cut(s) 438
EcoRI GAATTC 2 cut(s) 899, 2164
EcoRII CCWGG 3 cut(s) 1156, 1327, 1779
EcoT14I CCWWGG 4 cut(s) 87, 741, 1270, 1603
EcoT38I GRGCYC 1 cut(s) 440
ErhI CCWWGG 4 cut(s) 87, 741, 1270, 1603
Esp3I CGTCTC 1 cut(s) 1832
FaeI CATG 7 cut(s) 81, 386, 685, 847, 875, 1274, 1999
FaqI GGGAC 2 cut(s) 593, 2065
FatI CATG 7 cut(s) 77, 382, 681, 843, 871, 1270, 1995
FauI CCCGC 1 cut(s) 147
FauNDI CATATG 4 cut(s) 708, 1114, 1322, 1516
FbaI TGATCA 2 cut(s) 646, 2265
Fnu4HI GCNGC 6 cut(s) 276, 279, 282, 285, 639, 2102
FokI GGATG 8 cut(s) 457, 700, 924, 977, 1421, 1475, 2120, 2144
FriOI GRGCYC 1 cut(s) 440
Fsp4HI GCNGC 6 cut(s) 276, 279, 282, 285, 639, 2102
FspBI CTAG 7 cut(s) 216, 690, 893, 1004, 1149, 1595, 1665
GlaI GCGC 1 cut(s) 955
GluI GCNGC 6 cut(s) 276, 279, 282, 285, 639, 2102
GsaI CCCAGC 1 cut(s) 1568
GsuI CTGGAG 1 cut(s) 1188
HaeII RGCGCY 1 cut(s) 957
HaeIII GGCC 6 cut(s) 92, 188, 331, 1233, 1327, 1496
HapII CCGG 6 cut(s) 433, 616, 910, 2062, 2105, 2150
HhaI GCGC 1 cut(s) 956
Hin1II CATG 7 cut(s) 81, 386, 685, 847, 875, 1274, 1999
Hin6I GCGC 1 cut(s) 954
HinP1I GCGC 1 cut(s) 954
HincII GTYRAC 1 cut(s) 1228
HindII GTYRAC 1 cut(s) 1228
HindIII AAGCTT 4 cut(s) 38, 352, 1871, 1961
HpaII CCGG 6 cut(s) 433, 616, 910, 2062, 2105, 2150
HphI GGTGA 1 cut(s) 203
Hpy166II GTNNAC 3 cut(s) 1080, 1228, 1600
Hpy188III TCNNGA 7 cut(s) 134, 238, 433, 1091, 2069, 2161, 2217
Hpy8I GTNNAC 3 cut(s) 1080, 1228, 1600
HpyAV CCTTC 3 cut(s) 426, 764, 1789
HpyCH4III ACNGT 4 cut(s) 1097, 1471, 1747, 1922
HpyCH4IV ACGT 1 cut(s) 1841
HpyF10VI GCNNNNNNNGC 6 cut(s) 281, 284, 491, 670, 989, 998
HpyF3I CTNAG 4 cut(s) 722, 729, 1874, 2238
HpySE526I ACGT 1 cut(s) 1841
Hsp92II CATG 7 cut(s) 81, 386, 685, 847, 875, 1274, 1999
HspAI GCGC 1 cut(s) 954
Kpn2I TCCGGA 1 cut(s) 432
Ksp22I TGATCA 2 cut(s) 646, 2265
Kzo9I GATC 4 cut(s) 646, 718, 1441, 2265
LmnI GCTCC 5 cut(s) 72, 435, 443, 851, 1238
Lsp1109I GCAGC 5 cut(s) 265, 271, 287, 650, 2113
LweI GCATC 5 cut(s) 571, 979, 1829, 1897, 1935
MaeI CTAG 7 cut(s) 216, 690, 893, 1004, 1149, 1595, 1665
MaeII ACGT 1 cut(s) 1841
MaeIII GTNAC 3 cut(s) 334, 1432, 1465
MalI GATC 4 cut(s) 648, 720, 1443, 2267
MboI GATC 4 cut(s) 646, 718, 1441, 2265
MfeI CAATTG 3 cut(s) 1014, 1248, 1899
MflI RGATCY 1 cut(s) 1441
MhlI GDGCHC 2 cut(s) 390, 440
MlsI TGGCCA 2 cut(s) 92, 1327
MluNI TGGCCA 2 cut(s) 92, 1327
MlyI GAGTC 3 cut(s) 702, 1343, 2249
MmeI TCCRAC 3 cut(s) 219, 1095, 1469
MnlI CCTC 6 cut(s) 200, 440, 550, 643, 1078, 1744
Mox20I TGGCCA 2 cut(s) 92, 1327
MroI TCCGGA 1 cut(s) 432
MscI TGGCCA 2 cut(s) 92, 1327
MseI TTAA 9 cut(s) 501, 575, 812, 1175, 1221, 1428, 1491, 1790, 2042
MslI CAYNNNNRTG 1 cut(s) 860
Msp20I TGGCCA 2 cut(s) 92, 1327
MspA1I CMGCKG 4 cut(s) 278, 284, 641, 1568
MspI CCGG 6 cut(s) 433, 616, 910, 2062, 2105, 2150
MspR9I CCNGG 3 cut(s) 1158, 1329, 1781
MunI CAATTG 3 cut(s) 1014, 1248, 1899
MvaI CCWGG 3 cut(s) 1158, 1329, 1781
MwoI GCNNNNNNNGC 6 cut(s) 281, 284, 491, 670, 989, 998
NcoI CCATGG 1 cut(s) 1270
NdeI CATATG 4 cut(s) 708, 1114, 1322, 1516
NdeII GATC 4 cut(s) 646, 718, 1441, 2265
NlaIII CATG 7 cut(s) 81, 386, 685, 847, 875, 1274, 1999
NlaIV GGNNCC 3 cut(s) 853, 1561, 2005
NmuCI GTSAC 1 cut(s) 334
PfeI GAWTC 7 cut(s) 115, 251, 1152, 1865, 2201, 2207, 2213
Pfl23II CGTACG 1 cut(s) 549
PflMI CCANNNNNTGG 2 cut(s) 1271, 1356
PfoI TCCNGGA 1 cut(s) 1779
PinAI ACCGGT 1 cut(s) 2061
PkrI GCNGC 6 cut(s) 277, 280, 283, 286, 640, 2103
PleI GAGTC 3 cut(s) 701, 1342, 2248
PpsI GAGTC 3 cut(s) 701, 1342, 2248
PshBI ATTAAT 1 cut(s) 1221
PsiI TTATAA 2 cut(s) 33, 2117
Psp124BI GAGCTC 1 cut(s) 440
Psp6I CCWGG 3 cut(s) 1156, 1327, 1779
PspFI CCCAGC 1 cut(s) 1564
PspGI CCWGG 3 cut(s) 1156, 1327, 1779
PspLI CGTACG 1 cut(s) 549
PspN4I GGNNCC 3 cut(s) 853, 1561, 2005
PspPI GGNCC 6 cut(s) 187, 329, 934, 1118, 1313, 2003
PsrI GAACNNNNNNTAC 1 cut(s) 31
PstI CTGCAG 1 cut(s) 640
PsuI RGATCY 1 cut(s) 1441
PvuII CAGCTG 3 cut(s) 278, 641, 1568
RsaI GTAC 5 cut(s) 17, 551, 1601, 1698, 2154
RsaNI GTAC 5 cut(s) 16, 550, 1600, 1697, 2153
RseI CAYNNNNRTG 1 cut(s) 860
SacI GAGCTC 1 cut(s) 440
SaqAI TTAA 9 cut(s) 501, 575, 812, 1175, 1221, 1428, 1491, 1790, 2042
SatI GCNGC 6 cut(s) 276, 279, 282, 285, 639, 2102
Sau3AI GATC 4 cut(s) 646, 718, 1441, 2265
Sau96I GGNCC 6 cut(s) 187, 329, 934, 1118, 1313, 2003
SchI GAGTC 3 cut(s) 702, 1343, 2249
ScrFI CCNGG 3 cut(s) 1158, 1329, 1781
SduI GDGCHC 2 cut(s) 390, 440
SfaNI GCATC 5 cut(s) 571, 979, 1829, 1897, 1935
SfcI CTRYAG 2 cut(s) 142, 636
SinI GGWCC 4 cut(s) 934, 1118, 1313, 2003
SmiMI CAYNNNNRTG 1 cut(s) 860
SmlI CTYRAG 1 cut(s) 1757
SmoI CTYRAG 1 cut(s) 1757
SsiI CCGC 2 cut(s) 154, 282
SspMI CTAG 7 cut(s) 216, 690, 893, 1004, 1149, 1595, 1665
SstI GAGCTC 1 cut(s) 440
StyD4I CCNGG 3 cut(s) 1156, 1327, 1779
StyI CCWWGG 4 cut(s) 87, 741, 1270, 1603
TaaI ACNGT 4 cut(s) 1097, 1471, 1747, 1922
TaiI ACGT 1 cut(s) 1844
TaqI TCGA 4 cut(s) 135, 254, 1419, 2260
TatI WGTACW 1 cut(s) 1696
TauI GCSGC 1 cut(s) 284
TfiI GAWTC 7 cut(s) 115, 251, 1152, 1865, 2201, 2207, 2213
Tru1I TTAA 9 cut(s) 501, 575, 812, 1175, 1221, 1428, 1491, 1790, 2042
Tru9I TTAA 9 cut(s) 501, 575, 812, 1175, 1221, 1428, 1491, 1790, 2042
TscAI CASTG 5 cut(s) 126, 156, 339, 825, 1927
TseFI GTSAC 1 cut(s) 334
TseI GCWGC 5 cut(s) 275, 278, 284, 638, 2101
Tsp45I GTSAC 1 cut(s) 334
TspGWI ACGGA 3 cut(s) 827, 1475, 1608
TspRI CASTG 5 cut(s) 126, 156, 339, 825, 1927
Van91I CCANNNNNTGG 2 cut(s) 1271, 1356
VpaK11BI GGWCC 4 cut(s) 934, 1118, 1313, 2003
VspI ATTAAT 1 cut(s) 1221
XapI RAATTY 3 cut(s) 899, 1613, 2164
XspI CTAG 7 cut(s) 216, 690, 893, 1004, 1149, 1595, 1665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.