Rh5DG281300

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
34512711 .. 34597322
84612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG281300.1

Sequence Viewer

Length: 2493 bp
ATGAGCTCGATGGAGAATCAGAAGAGGAGGATCAGTATCAACCTTGTTCTTTTGTCATGGATTTTCATGGTGGCCGCCATTGCAGCTGAAAACACATCAACAATCCCAGTGAACGTGGGAGTTGTTGTAGACCTTGATGAAGTGAGTGGGAAGATGTATTTGAGTTGCATAGAAATGGCGCTCTCAGACTTCTATGCTTCCCATGCTCAATACAAGACTAGGGTCGTTTTGAACACCAGTAACTCCCACGAAGATGTCGTTGGTGCAGCTGATGCAGCTTTGGATCTGATAACGAATGTAGAAGTGAAAGCAATCCTAGGACCAATGACATCAATGCAAGCAACTTTTGTTGTTAAACTTGGAGAAAAAGCTCATGTGCCAATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCAGAGCTCCTATTTTTTCCAATTTGCACAAAATGACTCAACCCAAGTGAAAGCCATAAGTGGTATTGTTCAAAACTTTGGATGGAGGCGAGTTGTCCCCATTTACGTAGACAATATGTACGGGGAAGGAATCATGCCCTTTCTAATTGATGCCTTGCTCGAGGTTGATGCTCATGTCCCATATCGAAGTGTAATTTCACAATCAGCCACCGATGATCAAATTGAGATAGAACTTTACAAGTTAATGACAATGCAGACTAGAGTCTTCATAGTGCATATGATGCCTAAACTTGCATCCCAGTTATTTGCCAAGGCGAAAGAGATTGGAATGATGAACAAGGGTTTTGTATGGATCACGACCAATGGGATTGGAGATCATTTAAAGGCAATGGGATCTGTTATGAATTCAATGCAAGGAGTATTAAGTGTTGAAACTGCTGTTTTAGACACATTGAAGCTCAGAGAGTTCAAAACAAGGTGGAAAAGACAATTCCAACAAGATTATCCAGAAATCATTGATGTTGAGCTGGATGCCTTTGGATATCGGGCTTATGATGCAGCTTTTGCAATAGCCATGGCAGTTGAAAAAGTTGGGAATGCAGGCTTTGGGTTTCAAAAGGGAAATGCTTCATCTTTGAAATCTACAGATCTTGGAACTCTAAAGGTCTCTCAATATGGTTCAAACCTTTCTAATGCCTTATCTCTTACCAGTTTCAGAGGCATAGTTGGTGATTTTAGTCTTGTTGATAGGCAACTTCAACTGTCAACTTTTATGATTGTTAATGTGAATGGTAATGGAGTAAGAGCAGTTGGTTATTGGACACCGGAAAATGGAAGGTTAATGAAGCAGTTGAATTCAACAAACAGTTGTACTGTTTCAGGTTTCAAGTGTGATGCTCTTGGACCCATTATATGGCCGGGAGAGTCATCCTCCGTTCCCAAAGGATGGGAGATCCCAGAAAATGGTACGAGGTTAAGATTTGGAGTTCCAGTGAAGGATGGTTTTACAGAGTTTGTTAAAGTAACAACAGATTTGGGAACTAATACCACTGATGTCACCGGGTTCAGTATTGATGTGTTTAAAGCTGTAGTGGAACTGTTACCATATGCACTTCCTTATGAGTTGATTCCCTATGCATATCCTAATGGCACCAGCGCTGGCACATATAATGATTTAATCTATCAAGTATACCTTGGGAATTTTGACGGTGTGGTTGGAGATGCAACAATTAGAGCAAACAGAACATTGTATGTGGATTTTGCAATGCCATATACGGAGTCTGGTGTAGTGATGGTTGTGCCAATCATAGACAGCAGAACCAAAAATGCATGGGTTTTTTTGCAGCCTTTAACATGGAACCTTTGGATGACTACTTTGTGTTTTTTCGTCTTTATTGGTTTTGTGATTTGGGTGCTTGAACACCGAATAAATGAAGATTTCCGTGGTCCTCCTTCACATCAAGTTGGCACAAGCTTTTGGTTCTCCTTTTCAACTATGGTTTTTTCACATAGGGAGAGAGTGGTGAGCAACCTGGGAAGATTTGTGATGATTATTTGGGTATTTGTTGTGCTGATAGTGACACAAAGCTACACTGCTAATCTAGCATCACTATTAACTGTCCCAAAGCTCCGACCAGCTGTTAATGATATAAATGATCTTCGAAGGAATGGTGATAACGTGGGCTACATGAGGGGTGCTTTTGTTTATGATCTCTTAAAAGAAGTGAAGTTTGATGATGCCAAGCTCAAGGCTTATGGATCTATGGAAGAAATAGATGACGCTCTTTCAAAAGGGAGTGCAAATGGTGGTATTGCTGCAATTGTTCATGAAACCCCGTACATGAAGCTACTCATTGCAAAATATTGTTCCAAGTATACTATGATTGGACCAATATTTAAAACCGATGGCTTTGGCTTCGTAAGATCTCTCTCTCCCCTCATACTATCTTACTTTCTATATTTAAGGTTTACAATTCCTATATACGAGATTCTAAAATTTCTCATGCATATAATTTTTTTCTTTGGTGGTGACTTTACAGGCATTTCCAAAAAATTCCCCTCTTGTATCTGA

Protein Analysis

830

Amino Acids

92.38

Weight (kDa)

6.31

Isoelectric Point (pI)

29.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 36 - 339 1.5e-20 Periplasmic binding protein
ANF_receptor PF01094 56 - 406 4.1e-73 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 485 - 574 2.6e-06 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 592 - 697 2e-34 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1571
AccB7I CCANNNNNTGG 3 cut(s) 1335, 1368, 1385
AccI GTMKAC 4 cut(s) 129, 531, 1611, 2297
AciI CCGC 1 cut(s) 75
AclWI GGATC 6 cut(s) 38, 291, 782, 823, 1369, 2188
AcoI YGGCCR 2 cut(s) 72, 1337
AcsI RAATTY 5 cut(s) 826, 1276, 1621, 2417, 2474
AcuI CTGAAG 1 cut(s) 407
AfaI GTAC 4 cut(s) 542, 1294, 1390, 2261
AfeI AGCGCT 1 cut(s) 1579
AfiI CCNNNNNNNGG 4 cut(s) 1253, 1335, 1368, 1385
AjnI CCWGG 1 cut(s) 1953
AjuI GAANNNNNNNTTGG 2 cut(s) 243, 275
Alw21I GWGCWC 2 cut(s) 8, 431
Alw26I GTCTC 1 cut(s) 1093
AlwI GGATC 6 cut(s) 38, 291, 782, 823, 1369, 2188
Ama87I CYCGRG 1 cut(s) 581
Aor51HI AGCGCT 1 cut(s) 1579
AoxI GGCC 2 cut(s) 72, 1337
ApeKI GCWGC 6 cut(s) 83, 266, 275, 980, 1765, 2237
ApoI RAATTY 5 cut(s) 826, 1276, 1621, 2417, 2474
Asp700I GAANNNNTTC 1 cut(s) 1048
AspA2I CCTAGG 1 cut(s) 316
AspLEI GCGC 2 cut(s) 181, 1580
AspS9I GGNCC 4 cut(s) 320, 1325, 1868, 2309
AsuC2I CCSGG 2 cut(s) 1341, 1483
AsuHPI GGTGA 5 cut(s) 1163, 1471, 1957, 2105, 2462
AsuII TTCGAA 1 cut(s) 2083
AvaI CYCGRG 1 cut(s) 581
AvaII GGWCC 4 cut(s) 320, 1325, 1868, 2309
AvrII CCTAGG 1 cut(s) 316
BanI GGYRCC 1 cut(s) 1571
BanII GRGCYC 2 cut(s) 8, 431
BbsI GAAGAC 1 cut(s) 679
Bbv12I GWGCWC 2 cut(s) 8, 431
BbvI GCAGC 6 cut(s) 95, 278, 287, 992, 1777, 2224
BccI CCATC 6 cut(s) 4, 498, 1362, 1415, 1708, 2321
BcgI CGANNNNNNTGC 2 cut(s) 572, 606
BciT130I CCWGG 1 cut(s) 1955
BclI TGATCA 1 cut(s) 637
BcnI CCSGG 2 cut(s) 1341, 1483
BcoDI GTCTC 1 cut(s) 1093
BfaI CTAG 4 cut(s) 219, 317, 681, 2024
BfmI CTRYAG 2 cut(s) 1065, 1509
BfoI RGCGCY 2 cut(s) 182, 1581
BglII AGATCT 2 cut(s) 1069, 2345
BisI GCNGC 7 cut(s) 75, 84, 267, 276, 981, 1766, 2238
BlnI CCTAGG 1 cut(s) 316
BlsI GCNGC 7 cut(s) 76, 85, 268, 277, 982, 1767, 2239
Bme1390I CCNGG 3 cut(s) 1341, 1483, 1955
Bme18I GGWCC 4 cut(s) 320, 1325, 1868, 2309
BmeT110I CYCGRG 1 cut(s) 581
BmgT120I GGNCC 4 cut(s) 320, 1325, 1868, 2309
BmiI GGNNCC 3 cut(s) 1327, 1573, 1781
BmrFI CCNGG 3 cut(s) 1341, 1483, 1955
BmrI ACTGGG 2 cut(s) 101, 715
BmuI ACTGGG 2 cut(s) 101, 715
BoxI GACNNNNGTC 2 cut(s) 221, 683
BpiI GAAGAC 1 cut(s) 679
BplI GAGNNNNNCTC 2 cut(s) 1337, 1369
Bpu14I TTCGAA 1 cut(s) 2083
BpuEI CTTGAG 1 cut(s) 2153
BpuMI CCSGG 2 cut(s) 1341, 1483
BsaAI YACGTR 1 cut(s) 529
BsaBI GATNNNNATC 1 cut(s) 35
BsaI GGTCTC 1 cut(s) 1093
BsaJI CCNNGG 6 cut(s) 316, 732, 996, 1615, 1864, 1954
BsaWI WCCGGW 1 cut(s) 1246
BsaXI ACNNNNNCTCC 6 cut(s) 19, 49, 111, 141, 1398, 1428
Bsc4I CCNNNNNNNGG 4 cut(s) 1253, 1335, 1368, 1385
Bse1I ACTGG 5 cut(s) 107, 237, 721, 1131, 1412
Bse3DI GCAATG 4 cut(s) 78, 816, 1692, 2274
Bse8I GATNNNNATC 1 cut(s) 35
BseBI CCWGG 1 cut(s) 1955
BseDI CCNNGG 6 cut(s) 316, 732, 996, 1615, 1864, 1954
BseGI GGATG 7 cut(s) 509, 716, 958, 1349, 1373, 1426, 1794
BseJI GATNNNNATC 1 cut(s) 35
BseLI CCNNNNNNNGG 4 cut(s) 1253, 1335, 1368, 1385
BseMI GCAATG 4 cut(s) 78, 816, 1692, 2274
BseMII CTCAG 2 cut(s) 198, 895
BseNI ACTGG 5 cut(s) 107, 237, 721, 1131, 1412
BseRI GAGGAG 1 cut(s) 40
BseXI GCAGC 6 cut(s) 95, 278, 287, 992, 1777, 2224
BsgI GTGCAG 1 cut(s) 285
BshFI GGCC 2 cut(s) 74, 1339
BshNI GGYRCC 1 cut(s) 1571
BsiHKAI GWGCWC 2 cut(s) 8, 431
BsiHKCI CYCGRG 1 cut(s) 581
BsiSI CCGG 3 cut(s) 1247, 1340, 1482
BslFI GGGAC 3 cut(s) 503, 584, 2027
BslI CCNNNNNNNGG 4 cut(s) 1253, 1335, 1368, 1385
BsmAI GTCTC 1 cut(s) 1093
BsmFI GGGAC 3 cut(s) 503, 584, 2027
BsmI GAATGC 1 cut(s) 1024
BsnI GGCC 2 cut(s) 74, 1339
Bso31I GGTCTC 1 cut(s) 1093
BsoBI CYCGRG 1 cut(s) 581
Bsp119I TTCGAA 1 cut(s) 2083
Bsp1286I GDGCHC 2 cut(s) 8, 431
Bsp19I CCATGG 1 cut(s) 996
BspACI CCGC 1 cut(s) 75
BspANI GGCC 2 cut(s) 74, 1339
BspCNI CTCAG 2 cut(s) 197, 894
BspHI TCATGA 1 cut(s) 2248
BspLI GGNNCC 3 cut(s) 1327, 1573, 1781
BspPI GGATC 6 cut(s) 38, 291, 782, 823, 1369, 2188
BspT104I TTCGAA 1 cut(s) 2083
BspT107I GGYRCC 1 cut(s) 1571
BspTNI GGTCTC 1 cut(s) 1093
BsrDI GCAATG 4 cut(s) 78, 816, 1692, 2274
BsrI ACTGG 5 cut(s) 107, 237, 721, 1131, 1412
BssECI CCNNGG 6 cut(s) 316, 732, 996, 1615, 1864, 1954
BssNAI GTATAC 2 cut(s) 1612, 2298
BssT1I CCWWGG 4 cut(s) 316, 732, 996, 1615
Bst1107I GTATAC 2 cut(s) 1612, 2298
Bst2UI CCWGG 1 cut(s) 1955
Bst4CI ACNGT 6 cut(s) 1185, 1289, 1297, 1521, 1631, 2041
Bst6I CTCTTC 1 cut(s) 17
BstAPI GCANNNNNTGC 3 cut(s) 272, 703, 986
BstBAI YACGTR 1 cut(s) 529
BstBI TTCGAA 1 cut(s) 2083
BstC8I GCNNGC 3 cut(s) 339, 1024, 1582
BstDEI CTNAG 2 cut(s) 184, 881
BstDSI CCRYGG 2 cut(s) 996, 1864
BstF5I GGATG 7 cut(s) 509, 716, 958, 1349, 1373, 1426, 1794
BstH2I RGCGCY 2 cut(s) 182, 1581
BstHHI GCGC 2 cut(s) 181, 1580
BstMAI GTCTC 1 cut(s) 1093
BstMWI GCNNNNNNNGC 9 cut(s) 80, 83, 203, 272, 275, 703, 977, 986, 2024
BstNI CCWGG 1 cut(s) 1955
BstPAI GACNNNNGTC 2 cut(s) 221, 683
BstSCI CCNGG 3 cut(s) 1339, 1481, 1953
BstSFI CTRYAG 2 cut(s) 1065, 1509
BstSNI TACGTA 1 cut(s) 529
BstV1I GCAGC 6 cut(s) 95, 278, 287, 992, 1777, 2224
BstV2I GAAGAC 1 cut(s) 679
BstX2I RGATCY 6 cut(s) 283, 815, 1069, 1374, 2180, 2345
BstYI RGATCY 6 cut(s) 283, 815, 1069, 1374, 2180, 2345
BstZ17I GTATAC 2 cut(s) 1612, 2298
BsuRI GGCC 2 cut(s) 74, 1339
BtgI CCRYGG 2 cut(s) 996, 1864
BtsCI GGATG 7 cut(s) 509, 716, 958, 1349, 1373, 1426, 1794
BtsI GCAGTG 1 cut(s) 2013
BtsIMutI CAGTG 4 cut(s) 114, 1419, 1470, 2013
Cac8I GCNNGC 3 cut(s) 339, 1024, 1582
CciI TCATGA 1 cut(s) 2248
CfoI GCGC 2 cut(s) 181, 1580
Cfr13I GGNCC 4 cut(s) 320, 1325, 1868, 2309
CseI GACGC 1 cut(s) 2210
Csp6I GTAC 4 cut(s) 541, 1293, 1389, 2260
CviQI GTAC 4 cut(s) 541, 1293, 1389, 2260
DdeI CTNAG 2 cut(s) 184, 881
DraI TTTAAA 3 cut(s) 804, 1504, 2320
EaeI YGGCCR 2 cut(s) 72, 1337
Eam1104I CTCTTC 1 cut(s) 17
EarI CTCTTC 1 cut(s) 17
Ecl136II GAGCTC 2 cut(s) 6, 429
Eco105I TACGTA 1 cut(s) 529
Eco130I CCWWGG 4 cut(s) 316, 732, 996, 1615
Eco24I GRGCYC 2 cut(s) 8, 431
Eco31I GGTCTC 1 cut(s) 1093
Eco32I GATATC 1 cut(s) 965
Eco47I GGWCC 4 cut(s) 320, 1325, 1868, 2309
Eco47III AGCGCT 1 cut(s) 1579
Eco53kI GAGCTC 2 cut(s) 6, 429
Eco57I CTGAAG 1 cut(s) 407
Eco88I CYCGRG 1 cut(s) 581
EcoICRI GAGCTC 2 cut(s) 6, 429
EcoRI GAATTC 2 cut(s) 826, 1276
EcoRII CCWGG 1 cut(s) 1953
EcoRV GATATC 1 cut(s) 965
EcoT14I CCWWGG 4 cut(s) 316, 732, 996, 1615
EcoT22I ATGCAT 3 cut(s) 1561, 1753, 2430
EcoT38I GRGCYC 2 cut(s) 8, 431
ErhI CCWWGG 4 cut(s) 316, 732, 996, 1615
FalI AAGNNNNNCTT 2 cut(s) 1599, 1631
FaqI GGGAC 3 cut(s) 503, 584, 2027
FauNDI CATATG 2 cut(s) 699, 1528
FbaI TGATCA 1 cut(s) 637
FblI GTMKAC 4 cut(s) 129, 531, 1611, 2297
Fnu4HI GCNGC 7 cut(s) 75, 84, 267, 276, 981, 1766, 2238
FokI GGATG 7 cut(s) 516, 703, 965, 1336, 1380, 1433, 1801
FriOI GRGCYC 2 cut(s) 8, 431
Fsp4HI GCNGC 7 cut(s) 75, 84, 267, 276, 981, 1766, 2238
FspBI CTAG 4 cut(s) 219, 317, 681, 2024
GlaI GCGC 2 cut(s) 180, 1579
GluI GCNGC 7 cut(s) 75, 84, 267, 276, 981, 1766, 2238
HaeII RGCGCY 2 cut(s) 182, 1581
HaeIII GGCC 2 cut(s) 74, 1339
HapII CCGG 3 cut(s) 1247, 1340, 1482
HgaI GACGC 1 cut(s) 2210
HhaI GCGC 2 cut(s) 181, 1580
Hin6I GCGC 2 cut(s) 179, 1578
HinP1I GCGC 2 cut(s) 179, 1578
HincII GTYRAC 1 cut(s) 1188
HindII GTYRAC 1 cut(s) 1188
HindIII AAGCTT 1 cut(s) 1894
HinfI GANTC 8 cut(s) 16, 458, 552, 684, 1346, 1549, 1700, 2410
HpaII CCGG 3 cut(s) 1247, 1340, 1482
HphI GGTGA 5 cut(s) 1163, 1471, 1957, 2105, 2462
Hpy166II GTNNAC 7 cut(s) 112, 130, 532, 1188, 1612, 2298, 2391
Hpy188I TCNGA 8 cut(s) 21, 187, 288, 426, 884, 1139, 2054, 2492
Hpy188III TCNNGA 3 cut(s) 778, 929, 2249
Hpy8I GTNNAC 7 cut(s) 112, 130, 532, 1188, 1612, 2298, 2391
HpyAV CCTTC 6 cut(s) 417, 542, 1251, 1411, 1884, 2079
HpyCH4III ACNGT 6 cut(s) 1185, 1289, 1297, 1521, 1631, 2041
HpyCH4IV ACGT 3 cut(s) 114, 528, 2100
HpyF10VI GCNNNNNNNGC 9 cut(s) 80, 83, 203, 272, 275, 703, 977, 986, 2024
HpyF3I CTNAG 2 cut(s) 184, 881
HpySE526I ACGT 3 cut(s) 114, 528, 2100
HspAI GCGC 2 cut(s) 179, 1578
Ksp22I TGATCA 1 cut(s) 637
LmnI GCTCC 2 cut(s) 434, 2055
Lsp1109I GCAGC 6 cut(s) 95, 278, 287, 992, 1777, 2224
MaeI CTAG 4 cut(s) 219, 317, 681, 2024
MaeII ACGT 3 cut(s) 114, 528, 2100
MaeIII GTNAC 6 cut(s) 239, 1444, 1477, 1521, 1999, 2450
MboII GAAGA 8 cut(s) 34, 163, 263, 679, 1868, 1971, 2072, 2201
MfeI CAATTG 1 cut(s) 2241
MflI RGATCY 6 cut(s) 283, 815, 1069, 1374, 2180, 2345
MhlI GDGCHC 2 cut(s) 8, 431
MlyI GAGTC 4 cut(s) 452, 693, 1355, 1709
MmeI TCCRAC 3 cut(s) 940, 1618, 2077
Mph1103I ATGCAT 3 cut(s) 1561, 1753, 2430
MroXI GAANNNNTTC 1 cut(s) 1048
MslI CAYNNNNRTG 2 cut(s) 173, 252
MspA1I CMGCKG 3 cut(s) 86, 269, 2060
MspI CCGG 3 cut(s) 1247, 1340, 1482
MspR9I CCNGG 3 cut(s) 1341, 1483, 1955
MunI CAATTG 1 cut(s) 2241
Mva1269I GAATGC 1 cut(s) 1024
MvaI CCWGG 1 cut(s) 1955
MwoI GCNNNNNNNGC 9 cut(s) 80, 83, 203, 272, 275, 703, 977, 986, 2024
NciI CCSGG 2 cut(s) 1341, 1483
NcoI CCATGG 1 cut(s) 996
NdeI CATATG 2 cut(s) 699, 1528
NlaIV GGNNCC 3 cut(s) 1327, 1573, 1781
NmuCI GTSAC 3 cut(s) 1477, 1999, 2450
NsiI ATGCAT 3 cut(s) 1561, 1753, 2430
NspV TTCGAA 1 cut(s) 2083
PaeR7I CTCGAG 1 cut(s) 581
PagI TCATGA 1 cut(s) 2248
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1024
PdmI GAANNNNTTC 1 cut(s) 1048
PfeI GAWTC 4 cut(s) 16, 552, 1549, 2410
PflMI CCANNNNNTGG 3 cut(s) 1335, 1368, 1385
PkrI GCNGC 7 cut(s) 76, 85, 268, 277, 982, 1767, 2239
PleI GAGTC 4 cut(s) 452, 692, 1354, 1708
PpsI GAGTC 4 cut(s) 452, 692, 1354, 1708
Ppu21I YACGTR 1 cut(s) 529
PshAI GACNNNNGTC 2 cut(s) 221, 683
Psp124BI GAGCTC 2 cut(s) 8, 431
Psp6I CCWGG 1 cut(s) 1953
PspGI CCWGG 1 cut(s) 1953
PspN4I GGNNCC 3 cut(s) 1327, 1573, 1781
PspPI GGNCC 4 cut(s) 320, 1325, 1868, 2309
PspXI VCTCGAGB 1 cut(s) 581
PsuI RGATCY 6 cut(s) 283, 815, 1069, 1374, 2180, 2345
PvuII CAGCTG 3 cut(s) 86, 269, 2060
RsaI GTAC 4 cut(s) 542, 1294, 1390, 2261
RsaNI GTAC 4 cut(s) 541, 1293, 1389, 2260
RseI CAYNNNNRTG 2 cut(s) 173, 252
SacI GAGCTC 2 cut(s) 8, 431
SatI GCNGC 7 cut(s) 75, 84, 267, 276, 981, 1766, 2238
Sau96I GGNCC 4 cut(s) 320, 1325, 1868, 2309
SchI GAGTC 4 cut(s) 452, 693, 1355, 1709
ScrFI CCNGG 3 cut(s) 1341, 1483, 1955
SduI GDGCHC 2 cut(s) 8, 431
SfcI CTRYAG 2 cut(s) 1065, 1509
Sfr274I CTCGAG 1 cut(s) 581
SfuI TTCGAA 1 cut(s) 2083
SinI GGWCC 4 cut(s) 320, 1325, 1868, 2309
SlaI CTCGAG 1 cut(s) 581
SmiMI CAYNNNNRTG 2 cut(s) 173, 252
SmlI CTYRAG 2 cut(s) 581, 2168
SmoI CTYRAG 2 cut(s) 581, 2168
SnaBI TACGTA 1 cut(s) 529
SsiI CCGC 1 cut(s) 75
SspI AATATT 2 cut(s) 2285, 2316
SspMI CTAG 4 cut(s) 219, 317, 681, 2024
SstI GAGCTC 2 cut(s) 8, 431
StyD4I CCNGG 3 cut(s) 1339, 1481, 1953
StyI CCWWGG 4 cut(s) 316, 732, 996, 1615
TaaI ACNGT 6 cut(s) 1185, 1289, 1297, 1521, 1631, 2041
TaiI ACGT 3 cut(s) 117, 531, 2103
TaqI TCGA 4 cut(s) 8, 582, 607, 2083
TatI WGTACW 1 cut(s) 1292
TauI GCSGC 1 cut(s) 77
TfiI GAWTC 4 cut(s) 16, 552, 1549, 2410
TscAI CASTG 4 cut(s) 114, 1419, 1477, 2020
TseFI GTSAC 3 cut(s) 1477, 1999, 2450
TseI GCWGC 6 cut(s) 83, 266, 275, 980, 1765, 2237
Tsp45I GTSAC 3 cut(s) 1477, 1999, 2450
TspGWI ACGGA 3 cut(s) 1345, 1712, 1853
TspRI CASTG 4 cut(s) 114, 1419, 1477, 2020
Van91I CCANNNNNTGG 3 cut(s) 1335, 1368, 1385
VpaK11BI GGWCC 4 cut(s) 320, 1325, 1868, 2309
XapI RAATTY 5 cut(s) 826, 1276, 1621, 2417, 2474
XhoI CTCGAG 1 cut(s) 581
XmaJI CCTAGG 1 cut(s) 316
XmiI GTMKAC 4 cut(s) 129, 531, 1611, 2297
XmnI GAANNNNTTC 1 cut(s) 1048
XspI CTAG 4 cut(s) 219, 317, 681, 2024
Zsp2I ATGCAT 3 cut(s) 1561, 1753, 2430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.