pycom08g04100

Glutamate receptor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
3152379 .. 3154359
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g04100.4

Sequence Viewer

Length: 1563 bp
ATGGGATCGATCCCGACAGACGGCAAAAGATTGAGAGTAGGAGTTCCTGTGGAGAATGGCTATCCTCAATTTGTGAAAGTAGTATATGACTCTAGCGCTAATACAACTCATGTTACTGGGTACGTCATTGACATCTTCAACGCTGCAATGGGCAAATTAAAGTACAATGTTGCCTATGATTTCTTTCCCTTCGCCAAGCCAGATGGTACAAGTGCTGGCACTTACGATGATTTGGTGCATCAAGTATTTCTCGGGAATTTCGATGCAGTGGCAGCAGACGCAACAATTAGAGCAGACAGGTCCTCGTATGTGGACTTTACCTTGCCATACACAGAATCAGGGGTAGTGATGGTAGTGCCAATGAAAGATAGAAAGAGCAAAAGTGCATGGATTTTCTTAAAGCCTTTGACACTGAATCTTTGGTTGACAAGTGCTTTCTTTTTCGTCTTCGTTGGTTCAGTGGTTTGGGTTCTTGAACACCGTATCAATGATGAATTTCGCGGTCCTCCCGCTCATCAAGTTGGCACAGTCTTTTGGTTCTCCTTTTCGACCATGGTTTTTGCACAGCGAGAGAGGGTGATTGGCAACTTGGCAAGGTCTGTGGAGATTGTTTGGATGTTTGTAGTGCTGATACTAACGCAAAGTTACACAGCGAGTCTAACTTCATTGTTAACATCTCAAGAACTTCAGCCAACTTTTACGAATATACTCGATCTTATAAACAATAGGGAGTATATTGGGTACAGAGAGGGTTCTTTCGTCCGCGACCTTCTGATAGGCCGTGGTGTTGATCCCTCCAAGTTACGGCCTTATACGTCTAGGGAAGAATGTGACGTATTGTTGACAAATGGGAGTGCCAAAGGCGGTATTGCTGCTGCTATCGACGAAACCCCCAACACTAGGCTGTTTCTTGCAAAATATTGCAAGAAATACACCATGATTGGCCCAATTTTCAGAACCGATGGCTTTGGCTTTGTCTTCCGGAAAGGTTCACCTCTTGTGCCAGATGTTTCAAGGGCGATCCTGGTCGTGAATGAGGGAAATGATACAACTGATGCTGAAAACAAATGGTTTGCGCCGGAAGGCACATGTTCAGATACATCACCCACCATCTCCGATTCCAACAGTCTTGGATTTGATAGCTTTTGGAGCCTCTTCCTCATTGTCGGGGTCTCCGCATCTTTAGCTCTTCTCATATTTGCAGTCTCTTTCTTTAATAGGCATTGGCATATCTTCATCGCGACAAGAGGTGACTCTGTGTGGAGCAGATTTATGGTTATGCTTAGAACTTTTGACCAAAGAGACCTTAGCTCCCATACTTTTAGAAAGAGTAGTGGCTCCCGAGATAGAGAAACCTACAATTTTGGAGCTACGGCTGTCGAGGATTCATCAGACAGTTACAGCACCTGCCCACCAAGCCCTGCCTCAGGCCTTTCAGACCACCCAGAAATACTGATTACAGCTGAAGGAGCTCACCCACGCATGGGTGAACAGAACAGGTCCGAGGCTCAAACTTCAGACAGAGTTCCGCAACAGCCAGGAGAAATCCTTCTAACGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

521

Amino Acids

57.84

Weight (kDa)

5.79

Isoelectric Point (pI)

33.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 719
AarI CACCTGC 1 cut(s) 1415
Acc36I ACCTGC 1 cut(s) 1415
AccBSI CCGCTC 1 cut(s) 512
AccII CGCG 3 cut(s) 501, 765, 1241
AccIII TCCGGA 1 cut(s) 981
AciI CCGC 6 cut(s) 501, 510, 763, 864, 1176, 1529
AclWI GGATC 4 cut(s) 4, 13, 785, 1015
AcsI RAATTY 2 cut(s) 256, 494
AcuI CTGAAG 3 cut(s) 671, 1485, 1500
AfaI GTAC 4 cut(s) 122, 164, 208, 743
AfeI AGCGCT 1 cut(s) 97
AfiI CCNNNNNNNGG 6 cut(s) 20, 804, 900, 1427, 1483, 1484
AflIII ACRYGT 1 cut(s) 1088
AgsI TTSAA 3 cut(s) 139, 476, 1014
AjnI CCWGG 2 cut(s) 1023, 1537
AluBI AGCT 6 cut(s) 1143, 1187, 1311, 1370, 1463, 1472
AluI AGCT 6 cut(s) 1143, 1187, 1311, 1370, 1463, 1472
Alw21I GWGCWC 1 cut(s) 1474
Alw26I GTCTC 3 cut(s) 1177, 1210, 1296
AlwI GGATC 4 cut(s) 4, 13, 785, 1015
AlwNI CAGNNNCTG 1 cut(s) 1407
Ama87I CYCGRG 2 cut(s) 251, 1341
Aor13HI TCCGGA 1 cut(s) 981
Aor51HI AGCGCT 1 cut(s) 97
AoxI GGCC 4 cut(s) 778, 806, 943, 1429
ApeKI GCWGC 4 cut(s) 143, 272, 872, 875
ApoI RAATTY 2 cut(s) 256, 494
Asp700I GAANNNNTTC 1 cut(s) 1548
AspLEI GCGC 2 cut(s) 98, 1078
AspS9I GGNCC 4 cut(s) 300, 503, 944, 1500
AsuHPI GGTGA 6 cut(s) 589, 984, 1095, 1262, 1466, 1499
AvaI CYCGRG 2 cut(s) 251, 1341
AvaII GGWCC 3 cut(s) 300, 503, 1500
AxyI CCTNAGG 1 cut(s) 1426
BanII GRGCYC 1 cut(s) 1474
BbsI GAAGAC 2 cut(s) 439, 970
Bbv12I GWGCWC 1 cut(s) 1474
BbvI GCAGC 4 cut(s) 130, 284, 859, 862
BccI CCATC 4 cut(s) 197, 343, 956, 1118
BceAI ACGGC 5 cut(s) 37, 765, 821, 1389, 1543
BciT130I CCWGG 2 cut(s) 1025, 1539
BcoDI GTCTC 3 cut(s) 1177, 1210, 1296
BfaI CTAG 3 cut(s) 93, 819, 900
BfoI RGCGCY 1 cut(s) 99
BfuAI ACCTGC 1 cut(s) 1415
BisI GCNGC 4 cut(s) 144, 273, 873, 876
BlsI GCNGC 4 cut(s) 145, 274, 874, 877
Bme1390I CCNGG 2 cut(s) 1025, 1539
Bme18I GGWCC 3 cut(s) 300, 503, 1500
BmeT110I CYCGRG 2 cut(s) 251, 1341
BmgT120I GGNCC 4 cut(s) 300, 503, 944, 1500
BmiI GGNNCC 2 cut(s) 1151, 1339
BmrFI CCNGG 2 cut(s) 1025, 1539
BmrI ACTGGG 1 cut(s) 126
BmsI GCATC 4 cut(s) 247, 253, 1045, 1187
BmuI ACTGGG 1 cut(s) 126
BpiI GAAGAC 2 cut(s) 439, 970
Bpu10I CCTNAGC 1 cut(s) 1307
BpuEI CTTGAG 1 cut(s) 663
Bsa29I ATCGAT 1 cut(s) 8
BsaI GGTCTC 2 cut(s) 1177, 1296
BsaJI CCNNGG 3 cut(s) 552, 781, 1503
BsaWI WCCGGW 1 cut(s) 981
BsaXI ACNNNNNCTCC 4 cut(s) 33, 63, 1295, 1325
Bsc4I CCNNNNNNNGG 6 cut(s) 20, 804, 900, 1427, 1483, 1484
Bse1I ACTGG 1 cut(s) 121
Bse21I CCTNAGG 1 cut(s) 1426
Bse3DI GCAATG 1 cut(s) 153
BseAI TCCGGA 1 cut(s) 981
BseBI CCWGG 2 cut(s) 1025, 1539
BseCI ATCGAT 1 cut(s) 8
BseDI CCNNGG 3 cut(s) 552, 781, 1503
BseGI GGATG 1 cut(s) 621
BseLI CCNNNNNNNGG 6 cut(s) 20, 804, 900, 1427, 1483, 1484
BseMI GCAATG 1 cut(s) 153
BseMII CTCAG 1 cut(s) 1440
BseNI ACTGG 1 cut(s) 121
BseXI GCAGC 4 cut(s) 130, 284, 859, 862
Bsh1236I CGCG 3 cut(s) 501, 765, 1241
BshFI GGCC 4 cut(s) 780, 808, 945, 1431
BshVI ATCGAT 1 cut(s) 8
BsiHKAI GWGCWC 1 cut(s) 1474
BsiHKCI CYCGRG 2 cut(s) 251, 1341
BsiSI CCGG 2 cut(s) 982, 1079
BslI CCNNNNNNNGG 6 cut(s) 20, 804, 900, 1427, 1483, 1484
BsmAI GTCTC 3 cut(s) 1177, 1210, 1296
BsnI GGCC 4 cut(s) 780, 808, 945, 1431
Bso31I GGTCTC 2 cut(s) 1177, 1296
BsoBI CYCGRG 2 cut(s) 251, 1341
Bsp1286I GDGCHC 1 cut(s) 1474
Bsp13I TCCGGA 1 cut(s) 981
Bsp143I GATC 5 cut(s) 5, 9, 712, 790, 1020
Bsp19I CCATGG 1 cut(s) 552
Bsp68I TCGCGA 1 cut(s) 1241
BspACI CCGC 6 cut(s) 501, 510, 763, 864, 1176, 1529
BspANI GGCC 4 cut(s) 780, 808, 945, 1431
BspCNI CTCAG 1 cut(s) 1439
BspDI ATCGAT 1 cut(s) 8
BspEI TCCGGA 1 cut(s) 981
BspFNI CGCG 3 cut(s) 501, 765, 1241
BspLI GGNNCC 2 cut(s) 1151, 1339
BspMI ACCTGC 1 cut(s) 1415
BspPI GGATC 4 cut(s) 4, 13, 785, 1015
BspQI GCTCTTC 1 cut(s) 1194
BspTNI GGTCTC 2 cut(s) 1177, 1296
BsrBI CCGCTC 1 cut(s) 512
BsrDI GCAATG 1 cut(s) 153
BsrI ACTGG 1 cut(s) 121
BssECI CCNNGG 3 cut(s) 552, 781, 1503
BssMI GATC 5 cut(s) 5, 9, 712, 790, 1020
BssT1I CCWWGG 1 cut(s) 552
Bst2UI CCWGG 2 cut(s) 1025, 1539
Bst4CI ACNGT 4 cut(s) 482, 529, 1127, 1397
Bst6I CTCTTC 2 cut(s) 1160, 1194
BstC8I GCNNGC 1 cut(s) 217
BstDEI CTNAG 3 cut(s) 1283, 1307, 1426
BstDSI CCRYGG 2 cut(s) 552, 781
BstENI CCTNNNNNAGG 1 cut(s) 1425
BstF5I GGATG 1 cut(s) 621
BstFNI CGCG 3 cut(s) 501, 765, 1241
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 2 cut(s) 98, 1078
BstKTI GATC 5 cut(s) 8, 12, 715, 793, 1023
BstMAI GTCTC 3 cut(s) 1177, 1210, 1296
BstMBI GATC 5 cut(s) 5, 9, 712, 790, 1020
BstMWI GCNNNNNNNGC 6 cut(s) 272, 278, 1149, 1184, 1416, 1469
BstNI CCWGG 2 cut(s) 1025, 1539
BstNSI RCATGY 1 cut(s) 1092
BstSCI CCNGG 2 cut(s) 1023, 1537
BstUI CGCG 3 cut(s) 501, 765, 1241
BstV1I GCAGC 4 cut(s) 130, 284, 859, 862
BstV2I GAAGAC 2 cut(s) 439, 970
Bsu15I ATCGAT 1 cut(s) 8
Bsu36I CCTNAGG 1 cut(s) 1426
BsuRI GGCC 4 cut(s) 780, 808, 945, 1431
BsuTUI ATCGAT 1 cut(s) 8
BtgI CCRYGG 2 cut(s) 552, 781
BtgZI GCGATG 1 cut(s) 1222
BtsCI GGATG 1 cut(s) 621
BtsI GCAGTG 1 cut(s) 273
BtsIMutI CAGTG 3 cut(s) 273, 410, 465
BtuMI TCGCGA 1 cut(s) 1241
BveI ACCTGC 1 cut(s) 1415
Cac8I GCNNGC 1 cut(s) 217
CaiI CAGNNNCTG 1 cut(s) 1407
CfoI GCGC 2 cut(s) 98, 1078
Cfr13I GGNCC 4 cut(s) 300, 503, 944, 1500
ClaI ATCGAT 1 cut(s) 8
CseI GACGC 1 cut(s) 287
Csp6I GTAC 4 cut(s) 121, 163, 207, 742
CspCI CAANNNNNGTGG 2 cut(s) 582, 617
CviAII CATG 6 cut(s) 110, 387, 553, 937, 1089, 1483
CviQI GTAC 4 cut(s) 121, 163, 207, 742
DdeI CTNAG 3 cut(s) 1283, 1307, 1426
DpnI GATC 5 cut(s) 7, 11, 714, 792, 1022
DpnII GATC 5 cut(s) 5, 9, 712, 790, 1020
Eam1104I CTCTTC 2 cut(s) 1160, 1194
EarI CTCTTC 2 cut(s) 1160, 1194
Ecl136II GAGCTC 1 cut(s) 1472
Eco130I CCWWGG 1 cut(s) 552
Eco147I AGGCCT 1 cut(s) 1431
Eco24I GRGCYC 1 cut(s) 1474
Eco31I GGTCTC 2 cut(s) 1177, 1296
Eco47I GGWCC 3 cut(s) 300, 503, 1500
Eco47III AGCGCT 1 cut(s) 97
Eco53kI GAGCTC 1 cut(s) 1472
Eco57I CTGAAG 3 cut(s) 671, 1485, 1500
Eco81I CCTNAGG 1 cut(s) 1426
Eco88I CYCGRG 2 cut(s) 251, 1341
EcoICRI GAGCTC 1 cut(s) 1472
EcoNI CCTNNNNNAGG 1 cut(s) 1425
EcoO109I RGGNCCY 1 cut(s) 300
EcoRII CCWGG 2 cut(s) 1023, 1537
EcoT14I CCWWGG 1 cut(s) 552
EcoT38I GRGCYC 1 cut(s) 1474
ErhI CCWWGG 1 cut(s) 552
FaeI CATG 6 cut(s) 113, 390, 556, 940, 1092, 1486
FatI CATG 6 cut(s) 109, 386, 552, 936, 1088, 1482
FauI CCCGC 1 cut(s) 517
Fnu4HI GCNGC 4 cut(s) 144, 273, 873, 876
FokI GGATG 1 cut(s) 628
FriOI GRGCYC 1 cut(s) 1474
Fsp4HI GCNGC 4 cut(s) 144, 273, 873, 876
FspBI CTAG 3 cut(s) 93, 819, 900
GlaI GCGC 2 cut(s) 97, 1077
GluI GCNGC 4 cut(s) 144, 273, 873, 876
HaeII RGCGCY 1 cut(s) 99
HaeIII GGCC 4 cut(s) 780, 808, 945, 1431
HapII CCGG 2 cut(s) 982, 1079
HgaI GACGC 1 cut(s) 287
HhaI GCGC 2 cut(s) 98, 1078
Hin1II CATG 6 cut(s) 113, 390, 556, 940, 1092, 1486
Hin6I GCGC 2 cut(s) 96, 1076
HinP1I GCGC 2 cut(s) 96, 1076
HincII GTYRAC 3 cut(s) 426, 672, 843
HindII GTYRAC 3 cut(s) 426, 672, 843
HinfI GANTC 7 cut(s) 89, 335, 415, 655, 1118, 1253, 1385
HpaI GTTAAC 1 cut(s) 672
HpaII CCGG 2 cut(s) 982, 1079
HphI GGTGA 6 cut(s) 589, 984, 1095, 1262, 1466, 1499
Hpy166II GTNNAC 6 cut(s) 313, 426, 672, 843, 992, 1490
Hpy188I TCNGA 8 cut(s) 774, 956, 1096, 1117, 1393, 1438, 1504, 1519
Hpy188III TCNNGA 8 cut(s) 13, 253, 473, 680, 982, 1030, 1240, 1341
Hpy8I GTNNAC 6 cut(s) 313, 426, 672, 843, 992, 1490
Hpy99I CGWCG 1 cut(s) 887
HpyAV CCTTC 5 cut(s) 199, 779, 1076, 1460, 1559
HpyCH4III ACNGT 4 cut(s) 482, 529, 1127, 1397
HpyCH4IV ACGT 3 cut(s) 123, 815, 834
HpyCH4V TGCA 8 cut(s) 146, 238, 266, 386, 563, 914, 924, 1202
HpyF10VI GCNNNNNNNGC 6 cut(s) 272, 278, 1149, 1184, 1416, 1469
HpyF3I CTNAG 3 cut(s) 1283, 1307, 1426
HpySE526I ACGT 3 cut(s) 123, 815, 834
Hsp92II CATG 6 cut(s) 113, 390, 556, 940, 1092, 1486
HspAI GCGC 2 cut(s) 96, 1076
Kpn2I TCCGGA 1 cut(s) 981
KspAI GTTAAC 1 cut(s) 672
Kzo9I GATC 5 cut(s) 5, 9, 712, 790, 1020
LguI GCTCTTC 1 cut(s) 1194
LmnI GCTCC 6 cut(s) 1149, 1263, 1316, 1343, 1367, 1469
Lsp1109I GCAGC 4 cut(s) 130, 284, 859, 862
LweI GCATC 4 cut(s) 247, 253, 1045, 1187
MaeI CTAG 3 cut(s) 93, 819, 900
MaeII ACGT 3 cut(s) 123, 815, 834
MaeIII GTNAC 6 cut(s) 112, 644, 801, 830, 1250, 1397
MalI GATC 5 cut(s) 7, 11, 714, 792, 1022
MbiI CCGCTC 1 cut(s) 512
MboI GATC 5 cut(s) 5, 9, 712, 790, 1020
MboII GAAGA 7 cut(s) 127, 439, 836, 970, 1147, 1181, 1225
MhlI GDGCHC 1 cut(s) 1474
MluCI AATT 7 cut(s) 68, 155, 256, 285, 494, 948, 1360
MlyI GAGTC 3 cut(s) 83, 664, 1247
MmeI TCCRAC 1 cut(s) 1146
MroI TCCGGA 1 cut(s) 981
MroXI GAANNNNTTC 1 cut(s) 1548
MseI TTAA 4 cut(s) 158, 398, 671, 1215
MspA1I CMGCKG 1 cut(s) 1463
MspI CCGG 2 cut(s) 982, 1079
MspR9I CCNGG 2 cut(s) 1025, 1539
MvaI CCWGG 2 cut(s) 1025, 1539
MvnI CGCG 3 cut(s) 501, 765, 1241
MwoI GCNNNNNNNGC 6 cut(s) 272, 278, 1149, 1184, 1416, 1469
NcoI CCATGG 1 cut(s) 552
NdeII GATC 5 cut(s) 5, 9, 712, 790, 1020
NlaIII CATG 6 cut(s) 113, 390, 556, 940, 1092, 1486
NlaIV GGNNCC 2 cut(s) 1151, 1339
NmuCI GTSAC 2 cut(s) 830, 1250
NruI TCGCGA 1 cut(s) 1241
NspI RCATGY 1 cut(s) 1092
PaqCI CACCTGC 1 cut(s) 1415
PceI AGGCCT 1 cut(s) 1431
PciI ACATGT 1 cut(s) 1088
PciSI GCTCTTC 1 cut(s) 1194
PcsI WCGNNNNNNNCGW 1 cut(s) 258
PdmI GAANNNNTTC 1 cut(s) 1548
PfeI GAWTC 4 cut(s) 335, 415, 1118, 1385
PkrI GCNGC 4 cut(s) 145, 274, 874, 877
PleI GAGTC 3 cut(s) 83, 663, 1247
PpsI GAGTC 3 cut(s) 83, 663, 1247
PpuMI RGGWCCY 1 cut(s) 300
PscI ACATGT 1 cut(s) 1088
PsiI TTATAA 1 cut(s) 719
Psp124BI GAGCTC 1 cut(s) 1474
Psp5II RGGWCCY 1 cut(s) 300
Psp6I CCWGG 2 cut(s) 1023, 1537
PspGI CCWGG 2 cut(s) 1023, 1537
PspN4I GGNNCC 2 cut(s) 1151, 1339
PspPI GGNCC 4 cut(s) 300, 503, 944, 1500
PspPPI RGGWCCY 1 cut(s) 300
PstNI CAGNNNCTG 1 cut(s) 1407
PvuII CAGCTG 1 cut(s) 1463
RruI TCGCGA 1 cut(s) 1241
RsaI GTAC 4 cut(s) 122, 164, 208, 743
RsaNI GTAC 4 cut(s) 121, 163, 207, 742
SacI GAGCTC 1 cut(s) 1474
SapI GCTCTTC 1 cut(s) 1194
SaqAI TTAA 4 cut(s) 158, 398, 671, 1215
SatI GCNGC 4 cut(s) 144, 273, 873, 876
Sau3AI GATC 5 cut(s) 5, 9, 712, 790, 1020
Sau96I GGNCC 4 cut(s) 300, 503, 944, 1500
SchI GAGTC 3 cut(s) 83, 664, 1247
ScrFI CCNGG 2 cut(s) 1025, 1539
SduI GDGCHC 1 cut(s) 1474
SfaNI GCATC 4 cut(s) 247, 253, 1045, 1187
SinI GGWCC 3 cut(s) 300, 503, 1500
SmlI CTYRAG 1 cut(s) 678
SmoI CTYRAG 1 cut(s) 678
Sse9I AATT 7 cut(s) 68, 155, 256, 285, 494, 948, 1360
SseBI AGGCCT 1 cut(s) 1431
SsiI CCGC 6 cut(s) 501, 510, 763, 864, 1176, 1529
SspI AATATT 1 cut(s) 920
SspMI CTAG 3 cut(s) 93, 819, 900
SstI GAGCTC 1 cut(s) 1474
StuI AGGCCT 1 cut(s) 1431
StyD4I CCNGG 2 cut(s) 1023, 1537
StyI CCWWGG 1 cut(s) 552
TaaI ACNGT 4 cut(s) 482, 529, 1127, 1397
TaiI ACGT 3 cut(s) 126, 818, 837
TaqI TCGA 6 cut(s) 8, 261, 548, 711, 882, 1380
TasI AATT 7 cut(s) 68, 155, 256, 285, 494, 948, 1360
TatI WGTACW 1 cut(s) 162
TfiI GAWTC 4 cut(s) 335, 415, 1118, 1385
Tru1I TTAA 4 cut(s) 158, 398, 671, 1215
Tru9I TTAA 4 cut(s) 158, 398, 671, 1215
TscAI CASTG 3 cut(s) 273, 417, 465
TseFI GTSAC 2 cut(s) 830, 1250
TseI GCWGC 4 cut(s) 143, 272, 872, 875
Tsp45I GTSAC 2 cut(s) 830, 1250
TspDTI ATGAA 5 cut(s) 377, 507, 654, 1225, 1377
TspRI CASTG 3 cut(s) 273, 417, 465
VpaK11BI GGWCC 3 cut(s) 300, 503, 1500
XagI CCTNNNNNAGG 1 cut(s) 1425
XapI RAATTY 2 cut(s) 256, 494
XceI RCATGY 1 cut(s) 1092
XmnI GAANNNNTTC 1 cut(s) 1548
XspI CTAG 3 cut(s) 93, 819, 900
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.