Rmu_sc0006576.1_g000005

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006576.1
Physical Location & Seq
Reverse (-)
43161 .. 46072
2912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006576.1_g000005.1.cds

Sequence Viewer

Length: 2472 bp
atgcaggcacacttcgttgttaatgtgggagaccaagctaaagtgcccattttgactttttctgcatcaagtccttctcttgcttcactcgggagctctttctttttccgacttacacaaaatgactcaatccaagtgaaagccataagtgatattgttaagaactttggatggagacgagttgttcccatcttcgaagacacttcttatggggagggaatcataccgtttctaattgatgccttgcaagcagttgaagctcatgttccccacagaagtgtagtagccactgatgatcaaattgaaattgagcttaataggttaaaagggatgcctactagagtcttcattgtgcatatgaatcctcatctgtgctccaggctatttgccagggcaaaaaagattggaatgatgagtgctggttatgtttggatcattgctagtgggatatctaatcgtttaagtatgatgagacattcacatctaaattccatggaaggtgtattaggtatacaaacatatattcgaagaacactaaagcttagagaatttgaaaagcggtggaaaatgaaattccaacaagagaatccaaacgtaactaaggttaagttggatgtttacggatttcaagctcatgatgctgtctttgcactagctatggcagtcgaacaagttggatatacaagcattgaatatcaaaagccaagtgattccttgaaggcaacagatcttgatgtctttaaggtatctcattatggtcaaaaacttgttggagccctgtctggtgttagatttgaaggtttagctggagatttcaatgtcgtagaagggcagcttcagtcatcaacttataaaataattaatgtaattggtggtaaagcaaaggaaatttcgttgtggactccagaaaaaagaatggttccaacaaacacaagcaaaatctttactaattccaagtgcatttttggacccattaagtggccaggtgatcctatctgtgttcctaaaggatgggagatcccaactaaaggaaataaattgaaaataggtgttcctgtcaagaaaggttttgaagagtttgttaagatcacgaaagatcttaacactaacacaacgactgtcaaagggttctgcatagatgtcttccttgcagcagtgaaattattaccatatgatcttcctcatgtgttcgttccctatgaaaattccaatggctcgatggctgggacttacgatgaattggtctatgaagtatttctcgagcaatttgatgctgttgttggagatactacaattagagcaaacagatccttgtatgttgactttacaatgccatacactaaatctgatgtagcaattgttgtgccaatcaaagacagcacaagaaaaaatgcatggattttcatgaagcctttgacagggggcctttggttgacaactttgtgtttcttcatctttattggttgtgttgtttgggtattggaacatcgaattaatgaagattttcggggggagagagtggtcagcaacttggctagatttgtgatgattatatgggtatttgttatgctcatagtgacgcaaagttacacagctagtctatcatcgctattaacagtccaacaactcatgccgactgttactgacttgagtgatcttttaaggaatggcgataatgtcggctacatcgagaatgcctttgttcgtgaggtcttgtatgaaataggttttaataataccaggctcagggttattaaatccgcggaagatggtgataaagagctcacaaaaggtactgcaaagggtggtattgctgcttttgttggtggaacgccattgttgaaggtttttgttgcaaagtaccgctccaaatacactataattggacctatctccaaaactgatgggtttgctttcgtgttccctaaacgttcacctcttgtagctgatatgtcaagcgcaatcctaaatttgaccgaaggaaaggagattctgaatcttgaagccacttggctagggaacgaaagcatttgtcaaggctcgagttctgccaatatatctggcaacagtcttggccttgagagcttttggggactattcctcattgctggagtcgcttctgtattagctctcataatatttttttcttccttcctttacgagcataagcatgtcctgatgccctctaattcaagagcttccatatggagaaggattcatgccttaattgaaatttttgatgatagagatgccagctcttatactttcagaagcagtcaaccgtctaataaaatcgttagtgttggcgatcatggaccgaatgcatcaccgattagcaactggccggactgccccttcagctatacaaaccatggagatcttgaccctgtatttggaggtcaacaaacgccatctacaggtggagcatctccggaaccagttccaactattgagcttgctatcactatttaa

Protein Analysis

823

Amino Acids

91.32

Weight (kDa)

8.61

Isoelectric Point (pI)

34.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 852
AccB7I CCANNNNNTGG 1 cut(s) 978
AccBSI CCGCTC 1 cut(s) 1866
AccI GTMKAC 1 cut(s) 511
AccII CGCG 1 cut(s) 1763
AccIII TCCGGA 1 cut(s) 2431
AciI CCGC 4 cut(s) 559, 1761, 1763, 1864
AclI AACGTT 1 cut(s) 1930
AclWI GGATC 4 cut(s) 440, 983, 1012, 1302
AcoI YGGCCR 2 cut(s) 980, 2342
AcsI RAATTY 7 cut(s) 487, 548, 572, 888, 1204, 1969, 2232
AcuI CTGAAG 2 cut(s) 821, 2341
AfaI GTAC 2 cut(s) 1795, 1862
AfiI CCNNNNNNNGG 6 cut(s) 978, 1028, 1418, 1746, 2393, 2417
AjnI CCWGG 4 cut(s) 377, 389, 982, 1739
AleI CACNNNNGTG 1 cut(s) 276
Alw21I GWGCWC 3 cut(s) 98, 377, 1785
Alw26I GTCTC 3 cut(s) 24, 169, 466
AlwI GGATC 4 cut(s) 440, 983, 1012, 1302
Ama87I CYCGRG 3 cut(s) 89, 1259, 2041
Aor13HI TCCGGA 1 cut(s) 2431
AoxI GGCC 4 cut(s) 980, 1423, 2074, 2342
ApeKI GCWGC 3 cut(s) 832, 1151, 1814
ApoI RAATTY 7 cut(s) 487, 548, 572, 888, 1204, 1969, 2232
ArsI GACNNNNNNTTYG 2 cut(s) 2375, 2407
AseI ATTAAT 2 cut(s) 861, 1494
Asp700I GAANNNNTTC 3 cut(s) 1254, 1503, 2439
AspLEI GCGC 1 cut(s) 1961
AspS9I GGNCC 4 cut(s) 968, 1423, 1886, 2315
AsuHPI GGTGA 4 cut(s) 998, 1784, 1926, 2319
AsuII TTCGAA 2 cut(s) 195, 526
AvaI CYCGRG 3 cut(s) 89, 1259, 2041
AvaII GGWCC 3 cut(s) 968, 1886, 2315
BaeGI GKGCMC 1 cut(s) 48
BalI TGGCCA 1 cut(s) 982
BanII GRGCYC 3 cut(s) 98, 778, 1785
BbsI GAAGAC 3 cut(s) 204, 337, 1135
Bbv12I GWGCWC 3 cut(s) 98, 377, 1785
BbvI GCAGC 3 cut(s) 844, 1163, 1801
BccI CCATC 7 cut(s) 165, 197, 1005, 1213, 1763, 1898, 2419
BciT130I CCWGG 4 cut(s) 379, 391, 984, 1741
BclI TGATCA 1 cut(s) 295
BcoDI GTCTC 3 cut(s) 24, 169, 466
BfaI CTAG 6 cut(s) 339, 441, 653, 1536, 1596, 2015
BfmI CTRYAG 1 cut(s) 2415
BglII AGATCT 3 cut(s) 727, 1096, 2377
BisI GCNGC 3 cut(s) 833, 1152, 1815
BlsI GCNGC 3 cut(s) 834, 1153, 1816
Bme1390I CCNGG 4 cut(s) 379, 391, 984, 1741
Bme18I GGWCC 3 cut(s) 968, 1886, 2315
BmeT110I CYCGRG 3 cut(s) 89, 1259, 2041
BmgT120I GGNCC 4 cut(s) 968, 1423, 1886, 2315
BmiI GGNNCC 5 cut(s) 775, 921, 970, 1424, 2436
BmrFI CCNGG 4 cut(s) 379, 391, 984, 1741
BmsI GCATC 9 cut(s) 74, 229, 321, 628, 1261, 2169, 2239, 2333, 2435
BpiI GAAGAC 3 cut(s) 204, 337, 1135
BpmI CTGGAG 4 cut(s) 361, 828, 888, 2130
Bpu10I CCTNAGC 1 cut(s) 1745
Bpu14I TTCGAA 2 cut(s) 195, 526
BpuEI CTTGAG 2 cut(s) 1669, 2099
BsaI GGTCTC 1 cut(s) 24
BsaJI CCNNGG 4 cut(s) 390, 492, 1761, 2371
BsaWI WCCGGW 1 cut(s) 2431
Bsc4I CCNNNNNNNGG 6 cut(s) 978, 1028, 1418, 1746, 2393, 2417
Bse1I ACTGG 2 cut(s) 2345, 2438
Bse3DI GCAATG 2 cut(s) 435, 2103
BseAI TCCGGA 1 cut(s) 2431
BseBI CCWGG 4 cut(s) 379, 391, 984, 1741
BseDI CCNNGG 4 cut(s) 390, 492, 1761, 2371
BseGI GGATG 4 cut(s) 176, 336, 619, 1016
BseLI CCNNNNNNNGG 6 cut(s) 978, 1028, 1418, 1746, 2393, 2417
BseMI GCAATG 2 cut(s) 435, 2103
BseMII CTCAG 1 cut(s) 1759
BseNI ACTGG 2 cut(s) 2345, 2438
BseSI GKGCMC 1 cut(s) 48
BseXI GCAGC 3 cut(s) 844, 1163, 1801
BseYI CCCAGC 1 cut(s) 1223
Bsh1236I CGCG 1 cut(s) 1763
BshFI GGCC 4 cut(s) 982, 1425, 2076, 2344
BsiHKAI GWGCWC 3 cut(s) 98, 377, 1785
BsiHKCI CYCGRG 3 cut(s) 89, 1259, 2041
BsiSI CCGG 2 cut(s) 2345, 2432
BslFI GGGAC 2 cut(s) 1240, 2106
BslI CCNNNNNNNGG 6 cut(s) 978, 1028, 1418, 1746, 2393, 2417
BsmAI GTCTC 3 cut(s) 24, 169, 466
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 2 cut(s) 1240, 2106
BsmI GAATGC 2 cut(s) 1699, 2326
BsnI GGCC 4 cut(s) 982, 1425, 2076, 2344
Bso31I GGTCTC 1 cut(s) 24
BsoBI CYCGRG 3 cut(s) 89, 1259, 2041
Bsp119I TTCGAA 2 cut(s) 195, 526
Bsp1286I GDGCHC 5 cut(s) 48, 98, 377, 778, 1785
Bsp13I TCCGGA 1 cut(s) 2431
Bsp19I CCATGG 2 cut(s) 492, 2371
BspACI CCGC 4 cut(s) 559, 1761, 1763, 1864
BspANI GGCC 4 cut(s) 982, 1425, 2076, 2344
BspCNI CTCAG 1 cut(s) 1758
BspEI TCCGGA 1 cut(s) 2431
BspFNI CGCG 1 cut(s) 1763
BspHI TCATGA 2 cut(s) 634, 1404
BspLI GGNNCC 5 cut(s) 775, 921, 970, 1424, 2436
BspPI GGATC 4 cut(s) 440, 983, 1012, 1302
BspT104I TTCGAA 2 cut(s) 195, 526
BspTNI GGTCTC 1 cut(s) 24
BsrBI CCGCTC 1 cut(s) 1866
BsrDI GCAATG 2 cut(s) 435, 2103
BsrI ACTGG 2 cut(s) 2345, 2438
BssECI CCNNGG 4 cut(s) 390, 492, 1761, 2371
BssNAI GTATAC 1 cut(s) 512
BssT1I CCWWGG 2 cut(s) 492, 2371
Bst1107I GTATAC 1 cut(s) 512
Bst2UI CCWGG 4 cut(s) 379, 391, 984, 1741
Bst4CI ACNGT 6 cut(s) 228, 1120, 1618, 1639, 2069, 2283
Bst6I CTCTTC 1 cut(s) 1068
BstBI TTCGAA 2 cut(s) 195, 526
BstC8I GCNNGC 4 cut(s) 6, 249, 2254, 2457
BstDEI CTNAG 3 cut(s) 542, 600, 1745
BstDSI CCRYGG 3 cut(s) 492, 1761, 2371
BstENI CCTNNNNNAGG 1 cut(s) 1416
BstF5I GGATG 4 cut(s) 176, 336, 619, 1016
BstFNI CGCG 1 cut(s) 1763
BstHHI GCGC 1 cut(s) 1961
BstMAI GTCTC 3 cut(s) 24, 169, 466
BstMWI GCNNNNNNNGC 7 cut(s) 248, 257, 638, 647, 2082, 2114, 2358
BstNI CCWGG 4 cut(s) 379, 391, 984, 1741
BstNSI RCATGY 1 cut(s) 2174
BstSCI CCNGG 4 cut(s) 377, 389, 982, 1739
BstSFI CTRYAG 1 cut(s) 2415
BstSLI GKGCMC 1 cut(s) 48
BstUI CGCG 1 cut(s) 1763
BstV1I GCAGC 3 cut(s) 844, 1163, 1801
BstV2I GAAGAC 3 cut(s) 204, 337, 1135
BstX2I RGATCY 5 cut(s) 727, 1017, 1096, 1307, 2377
BstYI RGATCY 5 cut(s) 727, 1017, 1096, 1307, 2377
BstZ17I GTATAC 1 cut(s) 512
BsuRI GGCC 4 cut(s) 982, 1425, 2076, 2344
BtgI CCRYGG 3 cut(s) 492, 1761, 2371
BtgZI GCGATG 1 cut(s) 1590
BtsCI GGATG 4 cut(s) 176, 336, 619, 1016
BtsI GCAGTG 1 cut(s) 1161
BtsIMutI CAGTG 2 cut(s) 288, 1161
Cac8I GCNNGC 4 cut(s) 6, 249, 2254, 2457
CciI TCATGA 2 cut(s) 634, 1404
CfoI GCGC 1 cut(s) 1961
Cfr13I GGNCC 4 cut(s) 968, 1423, 1886, 2315
Cfr42I CCGCGG 1 cut(s) 1764
CseI GACGC 1 cut(s) 1588
Csp6I GTAC 2 cut(s) 1794, 1861
CviQI GTAC 2 cut(s) 1794, 1861
DdeI CTNAG 3 cut(s) 542, 600, 1745
EaeI YGGCCR 2 cut(s) 980, 2342
Eam1104I CTCTTC 1 cut(s) 1068
EarI CTCTTC 1 cut(s) 1068
Ecl136II GAGCTC 2 cut(s) 96, 1783
Eco130I CCWWGG 2 cut(s) 492, 2371
Eco24I GRGCYC 3 cut(s) 98, 778, 1785
Eco31I GGTCTC 1 cut(s) 24
Eco32I GATATC 1 cut(s) 450
Eco47I GGWCC 3 cut(s) 968, 1886, 2315
Eco53kI GAGCTC 2 cut(s) 96, 1783
Eco57I CTGAAG 2 cut(s) 821, 2341
Eco88I CYCGRG 3 cut(s) 89, 1259, 2041
EcoICRI GAGCTC 2 cut(s) 96, 1783
EcoNI CCTNNNNNAGG 1 cut(s) 1416
EcoO109I RGGNCCY 1 cut(s) 1423
EcoRII CCWGG 4 cut(s) 377, 389, 982, 1739
EcoRV GATATC 1 cut(s) 450
EcoT14I CCWWGG 2 cut(s) 492, 2371
EcoT22I ATGCAT 2 cut(s) 1396, 2326
EcoT38I GRGCYC 3 cut(s) 98, 778, 1785
ErhI CCWWGG 2 cut(s) 492, 2371
Esp3I CGTCTC 1 cut(s) 169
FalI AAGNNNNNCTT 2 cut(s) 819, 851
FaqI GGGAC 2 cut(s) 1240, 2106
FauNDI CATATG 3 cut(s) 357, 1171, 2204
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 1 cut(s) 511
Fnu4HI GCNGC 3 cut(s) 833, 1152, 1815
FokI GGATG 4 cut(s) 183, 343, 626, 1023
FriOI GRGCYC 3 cut(s) 98, 778, 1785
Fsp4HI GCNGC 3 cut(s) 833, 1152, 1815
FspBI CTAG 6 cut(s) 339, 441, 653, 1536, 1596, 2015
GlaI GCGC 1 cut(s) 1960
GluI GCNGC 3 cut(s) 833, 1152, 1815
GsaI CCCAGC 1 cut(s) 1227
GsuI CTGGAG 4 cut(s) 361, 828, 888, 2130
HaeIII GGCC 4 cut(s) 982, 1425, 2076, 2344
HapII CCGG 2 cut(s) 2345, 2432
HgaI GACGC 1 cut(s) 1588
HhaI GCGC 1 cut(s) 1961
Hin6I GCGC 1 cut(s) 1959
HinP1I GCGC 1 cut(s) 1959
HincII GTYRAC 4 cut(s) 1321, 1434, 2279, 2402
HindII GTYRAC 4 cut(s) 1321, 1434, 2279, 2402
HindIII AAGCTT 1 cut(s) 539
HpaII CCGG 2 cut(s) 2345, 2432
HphI GGTGA 4 cut(s) 998, 1784, 1926, 2319
Hpy166II GTNNAC 8 cut(s) 512, 619, 900, 1321, 1434, 1934, 2279, 2402
Hpy188I TCNGA 4 cut(s) 110, 1348, 1995, 2270
Hpy8I GTNNAC 8 cut(s) 512, 619, 900, 1321, 1434, 1934, 2279, 2402
HpyCH4III ACNGT 6 cut(s) 228, 1120, 1618, 1639, 2069, 2283
HpyCH4IV ACGT 2 cut(s) 594, 1930
HpyF10VI GCNNNNNNNGC 7 cut(s) 248, 257, 638, 647, 2082, 2114, 2358
HpyF3I CTNAG 3 cut(s) 542, 600, 1745
HpySE526I ACGT 2 cut(s) 594, 1930
HspAI GCGC 1 cut(s) 1959
Kpn2I TCCGGA 1 cut(s) 2431
Ksp22I TGATCA 1 cut(s) 295
KspI CCGCGG 1 cut(s) 1764
LmnI GCTCC 5 cut(s) 93, 380, 773, 1871, 2423
Lsp1109I GCAGC 3 cut(s) 844, 1163, 1801
LweI GCATC 9 cut(s) 74, 229, 321, 628, 1261, 2169, 2239, 2333, 2435
MaeI CTAG 6 cut(s) 339, 441, 653, 1536, 1596, 2015
MaeII ACGT 2 cut(s) 594, 1930
MaeIII GTNAC 4 cut(s) 595, 1576, 1586, 1639
MbiI CCGCTC 1 cut(s) 1866
MfeI CAATTG 1 cut(s) 1356
MflI RGATCY 5 cut(s) 727, 1017, 1096, 1307, 2377
MhlI GDGCHC 5 cut(s) 48, 98, 377, 778, 1785
MlsI TGGCCA 1 cut(s) 982
MluNI TGGCCA 1 cut(s) 982
MlyI GAGTC 4 cut(s) 119, 351, 895, 2121
MmeI TCCRAC 9 cut(s) 133, 591, 601, 655, 751, 947, 1261, 1645, 2468
MnlI CCTC 8 cut(s) 208, 375, 1191, 1702, 1947, 2111, 2194, 2390
Mox20I TGGCCA 1 cut(s) 982
Mph1103I ATGCAT 2 cut(s) 1396, 2326
MroI TCCGGA 1 cut(s) 2431
MroXI GAANNNNTTC 3 cut(s) 1254, 1503, 2439
MscI TGGCCA 1 cut(s) 982
MslI CAYNNNNRTG 2 cut(s) 276, 2169
Msp20I TGGCCA 1 cut(s) 982
MspA1I CMGCKG 1 cut(s) 1763
MspI CCGG 2 cut(s) 2345, 2432
MspR9I CCNGG 4 cut(s) 379, 391, 984, 1741
MunI CAATTG 1 cut(s) 1356
Mva1269I GAATGC 2 cut(s) 1699, 2326
MvaI CCWGG 4 cut(s) 379, 391, 984, 1741
MvnI CGCG 1 cut(s) 1763
MwoI GCNNNNNNNGC 7 cut(s) 248, 257, 638, 647, 2082, 2114, 2358
NcoI CCATGG 2 cut(s) 492, 2371
NdeI CATATG 3 cut(s) 357, 1171, 2204
NlaIV GGNNCC 5 cut(s) 775, 921, 970, 1424, 2436
NmuCI GTSAC 1 cut(s) 1576
NsiI ATGCAT 2 cut(s) 1396, 2326
NspI RCATGY 1 cut(s) 2174
NspV TTCGAA 2 cut(s) 195, 526
OliI CACNNNNGTG 1 cut(s) 276
PaeR7I CTCGAG 2 cut(s) 1259, 2041
PagI TCATGA 2 cut(s) 634, 1404
PcsI WCGNNNNNNNCGW 1 cut(s) 1686
PctI GAATGC 2 cut(s) 1699, 2326
PdmI GAANNNNTTC 3 cut(s) 1254, 1503, 2439
PfeI GAWTC 7 cut(s) 219, 361, 586, 710, 1990, 1996, 2215
PflMI CCANNNNNTGG 1 cut(s) 978
PkrI GCNGC 3 cut(s) 834, 1153, 1816
PleI GAGTC 4 cut(s) 119, 350, 895, 2120
PpsI GAGTC 4 cut(s) 119, 350, 895, 2120
PshBI ATTAAT 2 cut(s) 861, 1494
PsiI TTATAA 1 cut(s) 852
Psp124BI GAGCTC 2 cut(s) 98, 1785
Psp1406I AACGTT 1 cut(s) 1930
Psp6I CCWGG 4 cut(s) 377, 389, 982, 1739
PspFI CCCAGC 1 cut(s) 1223
PspGI CCWGG 4 cut(s) 377, 389, 982, 1739
PspN4I GGNNCC 5 cut(s) 775, 921, 970, 1424, 2436
PspPI GGNCC 4 cut(s) 968, 1423, 1886, 2315
PspXI VCTCGAGB 1 cut(s) 2041
PsuI RGATCY 5 cut(s) 727, 1017, 1096, 1307, 2377
RsaI GTAC 2 cut(s) 1795, 1862
RsaNI GTAC 2 cut(s) 1794, 1861
RseI CAYNNNNRTG 2 cut(s) 276, 2169
SacI GAGCTC 2 cut(s) 98, 1785
SacII CCGCGG 1 cut(s) 1764
SatI GCNGC 3 cut(s) 833, 1152, 1815
Sau96I GGNCC 4 cut(s) 968, 1423, 1886, 2315
SchI GAGTC 4 cut(s) 119, 351, 895, 2121
ScrFI CCNGG 4 cut(s) 379, 391, 984, 1741
SduI GDGCHC 5 cut(s) 48, 98, 377, 778, 1785
SfaNI GCATC 9 cut(s) 74, 229, 321, 628, 1261, 2169, 2239, 2333, 2435
SfcI CTRYAG 1 cut(s) 2415
Sfr274I CTCGAG 2 cut(s) 1259, 2041
Sfr303I CCGCGG 1 cut(s) 1764
SfuI TTCGAA 2 cut(s) 195, 526
SgrBI CCGCGG 1 cut(s) 1764
SinI GGWCC 3 cut(s) 968, 1886, 2315
SlaI CTCGAG 2 cut(s) 1259, 2041
SmiMI CAYNNNNRTG 2 cut(s) 276, 2169
SmlI CTYRAG 4 cut(s) 1259, 1648, 2041, 2078
SmoI CTYRAG 4 cut(s) 1259, 1648, 2041, 2078
SsiI CCGC 4 cut(s) 559, 1761, 1763, 1864
SspI AATATT 1 cut(s) 2139
SspMI CTAG 6 cut(s) 339, 441, 653, 1536, 1596, 2015
SstI GAGCTC 2 cut(s) 98, 1785
StyD4I CCNGG 4 cut(s) 377, 389, 982, 1739
StyI CCWWGG 2 cut(s) 492, 2371
TaaI ACNGT 6 cut(s) 228, 1120, 1618, 1639, 2069, 2283
TaiI ACGT 2 cut(s) 597, 1933
TaqI TCGA 8 cut(s) 195, 526, 666, 1217, 1260, 1489, 1689, 2042
TaqII GACCGA 2 cut(s) 1991, 2332
TfiI GAWTC 7 cut(s) 219, 361, 586, 710, 1990, 1996, 2215
TscAI CASTG 2 cut(s) 295, 1161
TseFI GTSAC 1 cut(s) 1576
TseI GCWGC 3 cut(s) 832, 1151, 1814
Tsp45I GTSAC 1 cut(s) 1576
TspGWI ACGGA 1 cut(s) 636
TspRI CASTG 2 cut(s) 295, 1161
Van91I CCANNNNNTGG 1 cut(s) 978
VpaK11BI GGWCC 3 cut(s) 968, 1886, 2315
VspI ATTAAT 2 cut(s) 861, 1494
XagI CCTNNNNNAGG 1 cut(s) 1416
XapI RAATTY 7 cut(s) 487, 548, 572, 888, 1204, 1969, 2232
XceI RCATGY 1 cut(s) 2174
XcmI CCANNNNNNNNNTGG 1 cut(s) 1216
XhoI CTCGAG 2 cut(s) 1259, 2041
XmiI GTMKAC 1 cut(s) 511
XmnI GAANNNNTTC 3 cut(s) 1254, 1503, 2439
XspI CTAG 6 cut(s) 339, 441, 653, 1536, 1596, 2015
Zsp2I ATGCAT 2 cut(s) 1396, 2326
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.