Rw5G025160

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
35772945 .. 35783378
10434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G025160.1

Sequence Viewer

Length: 2943 bp
ATGAGCTCGATGGAGAATCAGAAGAGGAGGATCAGTATCATCCTTGTTCTTCTTTCATGGATTTTCATGGCGGCCGCCATGGCAGCTAAAAACGCATTAACAATCCCAGTGAACGTGGGAGTTGTTGTAGACCTTGATGAACCGAGTGGGAAGATGTATTTGAGTTGCATAGAAATGGCGCTCTCAGACTTCTATGCTTCCCATGCTCAATACGAGACTAGGGTTGTTTTGAACACCAGTAACTCCCACGAAGATGTCGTTGGTGCAGCTGACGCAGCTTTGGATCTGATAAAGAATGTAGAAGTGAAAGCAATCCTAGGACCAATGACATCAATGCAAGCAACTTTTGTTATTAATCTTGGAGAAAAAGCTCATGTACCAATCATATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTTCAGAGCTCCTATTTTTTCCAATTTGCCCAAAATGACTCAACCCAAGTGAAAGCCATAACTGGTATTATTCAAAACTTTGGATGGAGGCGAGTTGTCCCCATTTACGTTGACAATATGTACGGGGAGGGAATCATGCCCTTTCTAATTGATGCCTTGCTCGAGGTTGATGCTCATGTCCCATATCGAAGTGTAATTTCACAGTCAGCCACCGATGATCAAATTGAGATAGAACTTTACAAGTTAATGACAATGCAGACTAGAGTCTTCATAGTGCATATGATGCCTAAACTTGCATCACAGTTATTTGCCAAGGCGAAAGAGATTGGAATGATGAACAAGGGTTTTGTATGGATCACGACCAATGGGATTGGAGATCGTTTAAAGGCAATGGAATCTGTTATGAATTCGATGCAAGGAGTAGTAAGTGTGGAAACTGATGTTTCAGACACATTGAAGCTTAGAGAATTTAAAACAAGGTGGAAAAGACAATTCCAACAAGAAAATCCAGAAATCATTGATGTTGAGTTGGATGCTTTTGGATATCGGGCTTATGATGCGGCTTTTGCAATAGCTATGGCAGTTGAAAAAGTTGGGAATGCAAGCTTCGGATCTCAAAAGGGAAATGCTTCATCTTTCAACTCTACAGATCTTGGAAGTTTAAAGGTTTCTCAATATGGTTCAAACATTTCTAATGCCTTATCACTCACGAGTTTTAGAGGCTTGGCTGGCAATTTTAGTCTTGTTGATAGGCAACTTCAACTATCGACTTTTAAGATTGTTAATGTCAATGGTAATGGAGGAAGAGGAAGAGCAGTTGGGTATTGGACACCAGAAAATGGAAGGTTAGTGAAGCAATTGAATTCAACAAACAGTTGTAATGTTTCAGCTTTCAATTGTGATGCTCTTGGACCCATTATATGGCCGGGAGAGTCATTATCCGTTCCCAAAGGATGGGACATCCCGGAAAACGGTACGAAGTTGAGAATTGGAGTTCCAGTGAGGGAAGGTTTTACAGAGTTTGTTAAAGTAACACCAAATTTGGGAGCTAATACCACTCATGTCACCGGGTTCAGTATTGACGTGTTTAAAGCTGCAGTGGAATTGTTACCATATGCACTTCCTTTTGAGTTGATTCCCTATGCATATCCTAATGGCACCAGCGCTGGCACTTATAATGATTTAATCCATGAAGTATATCTTGGGAATTTTGACGGTGTGGTCGGAGATGCAACAATTAGAGCAAACAGAACATTGTATGTGGACTTTGCAATGCCATATACGGAGTCTGGTGTAGTGATGGTTGTGCCAATCATAGACAGCAGAACCAAAAATGCATGGGTTTTTTTGCAGCCTTTAACATGGAACCTTTGGATGACTACTTTGTGTTTTTTCATATTTATTGGTTTTGTGATTTGGGTGCTTGAACACCGAATAAATGAAGATTTCCGTGGTCCTCCTTCACATCAAGTTGGCACAAGCTTTTGGTTCTCCTTTTCAACTATGGTTTTTTCACATAGGGAGAGAGTGGTGAGCAACCTGGGAAGATTTGTGATGATTATATGGGTATTTGTTGTGCTGATAGTGACACAAAGCTACACTGCTAATCTAGCATCACTATTAACTGTCCAACAACTCCGACCAACTGTCAACGATATAAATGATCTTCGAAGGAATGGTGATAACGTGGGCTACATGAGCGGTGCTTTTGTTTATGATCTCTTAAAAGAAGTAAAGTTTGATGATGCCAAGCTCAAGGCTTATGGATCTATGGAAGAAATAGATGACGCTCTTTCAAAAGGGAGTGCAAATGGTGGAATTGCTGCAATTGTTCATGAAACCCCGTACATGAAGCTACTCATTGCAAAATATTGTTCCAAGTATACTATGATTGGACCAATATTTAAAACCGATGGCTTTGGCTTCGCATTTCCAAAAAATTCCCCTCTTGTATCTGACATTACACAAGCAATCCTAAATTTGACGGATGATGGATTGATGACAAAAATTGAAGATAAATGGATCAAAAAAGATAGTAACTGTAAAGACTCTAATGGGAATTTTTCTAGCAGTGCTCTTGGTCTTGAGAGCTTTTGGGGCCTTTTTTTAATTGCAGGGATAACGTCAATATTTGCTCTAATTATATTTGTAACTTCCTTCTTGTACGAGCATAAGCATGTCTTGATGCACCCTGATTCAGGCACCTCTAAGTCAAAAAGGATCAGAACCATGTTTGAGATCTTCAACGAAAAAAAACTCAGCTCTCATACATTTAGAAGCAACCAACATTCAGACAGTGGTGTTAGTGCTCAAGATCATGAAGTGAAAGTATCACCAAATAACAACCGGCCAGAAAATCCACAGAGCTATACCAACCACACCGATGCGACTTCTGTATTTTCTCGGGAACAAGAAACACTGTCTCATGGTCAAGCATCTCCAGAAACCATTCCAACTATTGAGCTTGCCATCACTATTCAAGAAACCCATGAAACTCTTGAAACAACTTTATCAAGAGCATAA

Protein Analysis

980

Amino Acids

108.69

Weight (kDa)

5.85

Isoelectric Point (pI)

31.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 36 - 340 4.1e-21 Periplasmic binding protein
ANF_receptor PF01094 56 - 406 3e-75 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 488 - 576 2.5e-06 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 493 - 816 3.9e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 594 - 847 6.3e-42 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1596
AasI GACNNNNNNGTC 1 cut(s) 1640
AccB1I GGYRCC 2 cut(s) 1577, 2621
AccB7I CCANNNNNTGG 3 cut(s) 1259, 1341, 1374
AccBSI CCGCTC 1 cut(s) 2121
AccI GTMKAC 2 cut(s) 129, 2303
AciI CCGC 4 cut(s) 71, 75, 980, 2121
AclWI GGATC 7 cut(s) 38, 291, 782, 1039, 2194, 2450, 2648
AcoI YGGCCR 3 cut(s) 72, 1343, 2768
AcsI RAATTY 8 cut(s) 826, 887, 1282, 1459, 1627, 2359, 2398, 2479
AcuI CTGAAG 1 cut(s) 407
AfaI GTAC 5 cut(s) 378, 542, 1396, 2267, 2585
AfeI AGCGCT 1 cut(s) 1585
AfiI CCNNNNNNNGG 6 cut(s) 1259, 1341, 1374, 1391, 1463, 2618
AflIII ACRYGT 1 cut(s) 1503
AhdI GACNNNNNGTC 1 cut(s) 2066
AjiI CACGTC 1 cut(s) 1504
AjnI CCWGG 1 cut(s) 1959
AjuI GAANNNNNNNTTGG 4 cut(s) 243, 275, 1605, 1637
Alw21I GWGCWC 4 cut(s) 8, 431, 2497, 2731
Alw26I GTCTC 2 cut(s) 209, 2847
AlwI GGATC 7 cut(s) 38, 291, 782, 1039, 2194, 2450, 2648
Ama87I CYCGRG 2 cut(s) 581, 2823
Aor51HI AGCGCT 1 cut(s) 1585
AoxI GGCC 4 cut(s) 72, 1343, 2518, 2768
ApeKI GCWGC 6 cut(s) 83, 266, 275, 1514, 1771, 2243
ApoI RAATTY 8 cut(s) 826, 887, 1282, 1459, 1627, 2359, 2398, 2479
AseI ATTAAT 1 cut(s) 354
Asp700I GAANNNNTTC 2 cut(s) 1048, 2868
AspA2I CCTAGG 1 cut(s) 316
AspLEI GCGC 2 cut(s) 181, 1586
AspS9I GGNCC 5 cut(s) 320, 1331, 1874, 2315, 2518
AsuC2I CCSGG 3 cut(s) 1347, 1385, 1489
AsuHPI GGTGA 4 cut(s) 1477, 1963, 2111, 2745
AsuII TTCGAA 1 cut(s) 2089
AvaI CYCGRG 2 cut(s) 581, 2823
AvaII GGWCC 4 cut(s) 320, 1331, 1874, 2315
AvrII CCTAGG 1 cut(s) 316
BanI GGYRCC 2 cut(s) 1577, 2621
BanII GRGCYC 2 cut(s) 8, 431
BauI CACGAG 1 cut(s) 1129
BbsI GAAGAC 1 cut(s) 679
Bbv12I GWGCWC 4 cut(s) 8, 431, 2497, 2731
BbvI GCAGC 6 cut(s) 95, 278, 287, 1501, 1783, 2230
BccI CCATC 7 cut(s) 4, 498, 1368, 1714, 2327, 2405, 2897
BcgI CGANNNNNNTGC 2 cut(s) 572, 606
BciT130I CCWGG 1 cut(s) 1961
BclI TGATCA 1 cut(s) 637
BcnI CCSGG 3 cut(s) 1347, 1385, 1489
BcoDI GTCTC 2 cut(s) 209, 2847
BfaI CTAG 5 cut(s) 219, 317, 681, 2030, 2487
BfmI CTRYAG 2 cut(s) 1065, 1515
BfoI RGCGCY 2 cut(s) 182, 1587
BglI GCCNNNNNGGC 1 cut(s) 80
BglII AGATCT 2 cut(s) 1069, 2658
BisI GCNGC 9 cut(s) 72, 75, 84, 267, 276, 981, 1515, 1772, 2244
BlnI CCTAGG 1 cut(s) 316
BlsI GCNGC 9 cut(s) 73, 76, 85, 268, 277, 982, 1516, 1773, 2245
Bme1390I CCNGG 4 cut(s) 1347, 1385, 1489, 1961
Bme18I GGWCC 4 cut(s) 320, 1331, 1874, 2315
BmeRI GACNNNNNGTC 1 cut(s) 2066
BmeT110I CYCGRG 2 cut(s) 581, 2823
BmgBI CACGTC 1 cut(s) 1504
BmgT120I GGNCC 5 cut(s) 320, 1331, 1874, 2315, 2518
BmiI GGNNCC 5 cut(s) 1333, 1579, 1787, 2519, 2623
BmrFI CCNGG 4 cut(s) 1347, 1385, 1489, 1961
BmrI ACTGGG 1 cut(s) 101
BmuI ACTGGG 1 cut(s) 101
BoxI GACNNNNGTC 1 cut(s) 683
BpiI GAAGAC 1 cut(s) 679
BpmI CTGGAG 1 cut(s) 2844
Bpu14I TTCGAA 1 cut(s) 2089
BpuEI CTTGAG 3 cut(s) 2159, 2525, 2715
BpuMI CCSGG 3 cut(s) 1347, 1385, 1489
BsaBI GATNNNNATC 1 cut(s) 35
BsaJI CCNNGG 5 cut(s) 78, 316, 732, 1870, 1960
BsaXI ACNNNNNCTCC 6 cut(s) 19, 49, 111, 141, 1404, 1434
Bsc4I CCNNNNNNNGG 6 cut(s) 1259, 1341, 1374, 1391, 1463, 2618
Bse118I RCCGGY 1 cut(s) 2766
Bse1I ACTGG 4 cut(s) 107, 237, 487, 1418
Bse3DI GCAATG 3 cut(s) 816, 1698, 2280
Bse8I GATNNNNATC 1 cut(s) 35
BseBI CCWGG 1 cut(s) 1961
BseDI CCNNGG 5 cut(s) 78, 316, 732, 1870, 1960
BseGI GGATG 7 cut(s) 39, 509, 958, 1379, 1380, 1800, 2413
BseJI GATNNNNATC 1 cut(s) 35
BseLI CCNNNNNNNGG 6 cut(s) 1259, 1341, 1374, 1391, 1463, 2618
BseMI GCAATG 3 cut(s) 816, 1698, 2280
BseMII CTCAG 2 cut(s) 198, 2692
BseNI ACTGG 4 cut(s) 107, 237, 487, 1418
BseRI GAGGAG 1 cut(s) 40
BseX3I CGGCCG 1 cut(s) 72
BseXI GCAGC 6 cut(s) 95, 278, 287, 1501, 1783, 2230
BsgI GTGCAG 1 cut(s) 285
Bsh1285I CGRYCG 1 cut(s) 75
BshFI GGCC 4 cut(s) 74, 1345, 2520, 2770
BshNI GGYRCC 2 cut(s) 1577, 2621
BsiEI CGRYCG 1 cut(s) 75
BsiHKAI GWGCWC 4 cut(s) 8, 431, 2497, 2731
BsiHKCI CYCGRG 2 cut(s) 581, 2823
BsiSI CCGG 4 cut(s) 1346, 1385, 1488, 2767
BslFI GGGAC 3 cut(s) 503, 584, 1391
BslI CCNNNNNNNGG 6 cut(s) 1259, 1341, 1374, 1391, 1463, 2618
BsmAI GTCTC 2 cut(s) 209, 2847
BsmFI GGGAC 3 cut(s) 503, 584, 1391
BsmI GAATGC 1 cut(s) 1024
BsnI GGCC 4 cut(s) 74, 1345, 2520, 2770
BsoBI CYCGRG 2 cut(s) 581, 2823
Bsp119I TTCGAA 1 cut(s) 2089
Bsp1286I GDGCHC 4 cut(s) 8, 431, 2497, 2731
Bsp19I CCATGG 1 cut(s) 78
BspACI CCGC 4 cut(s) 71, 75, 980, 2121
BspANI GGCC 4 cut(s) 74, 1345, 2520, 2770
BspCNI CTCAG 2 cut(s) 197, 2691
BspHI TCATGA 2 cut(s) 2254, 2737
BspLI GGNNCC 5 cut(s) 1333, 1579, 1787, 2519, 2623
BspMAI CTGCAG 1 cut(s) 1519
BspPI GGATC 7 cut(s) 38, 291, 782, 1039, 2194, 2450, 2648
BspQI GCTCTTC 1 cut(s) 1225
BspT104I TTCGAA 1 cut(s) 2089
BspT107I GGYRCC 2 cut(s) 1577, 2621
BsrBI CCGCTC 1 cut(s) 2121
BsrDI GCAATG 3 cut(s) 816, 1698, 2280
BsrFI RCCGGY 1 cut(s) 2766
BsrI ACTGG 4 cut(s) 107, 237, 487, 1418
BssAI RCCGGY 1 cut(s) 2766
BssECI CCNNGG 5 cut(s) 78, 316, 732, 1870, 1960
BssNAI GTATAC 1 cut(s) 2304
BssSI CACGAG 1 cut(s) 1129
BssT1I CCWWGG 3 cut(s) 78, 316, 732
Bst1107I GTATAC 1 cut(s) 2304
Bst2BI CACGAG 1 cut(s) 1129
Bst2UI CCWGG 1 cut(s) 1961
Bst6I CTCTTC 3 cut(s) 17, 1219, 1225
BstAPI GCANNNNNTGC 1 cut(s) 703
BstBI TTCGAA 1 cut(s) 2089
BstC8I GCNNGC 5 cut(s) 339, 1024, 1150, 1588, 2886
BstDEI CTNAG 4 cut(s) 184, 881, 2628, 2678
BstDSI CCRYGG 2 cut(s) 78, 1870
BstENI CCTNNNNNAGG 1 cut(s) 2616
BstF5I GGATG 7 cut(s) 39, 509, 958, 1379, 1380, 1800, 2413
BstH2I RGCGCY 2 cut(s) 182, 1587
BstHHI GCGC 2 cut(s) 181, 1586
BstMAI GTCTC 2 cut(s) 209, 2847
BstMCI CGRYCG 1 cut(s) 75
BstNI CCWGG 1 cut(s) 1961
BstNSI RCATGY 1 cut(s) 2600
BstPAI GACNNNNGTC 1 cut(s) 683
BstSCI CCNGG 4 cut(s) 1345, 1383, 1487, 1959
BstSFI CTRYAG 2 cut(s) 1065, 1515
BstV1I GCAGC 6 cut(s) 95, 278, 287, 1501, 1783, 2230
BstV2I GAAGAC 1 cut(s) 679
BstX2I RGATCY 5 cut(s) 283, 1031, 1069, 2186, 2658
BstYI RGATCY 5 cut(s) 283, 1031, 1069, 2186, 2658
BstZ17I GTATAC 1 cut(s) 2304
BstZI CGGCCG 1 cut(s) 72
BsuRI GGCC 4 cut(s) 74, 1345, 2520, 2770
BtgI CCRYGG 2 cut(s) 78, 1870
BtrI CACGTC 1 cut(s) 1504
BtsCI GGATG 7 cut(s) 39, 509, 958, 1379, 1380, 1800, 2413
BtsI GCAGTG 3 cut(s) 1524, 2019, 2497
BtsIMutI CAGTG 7 cut(s) 114, 1425, 1524, 2019, 2497, 2722, 2837
Cac8I GCNNGC 5 cut(s) 339, 1024, 1150, 1588, 2886
CciI TCATGA 2 cut(s) 2254, 2737
CciNI GCGGCCGC 1 cut(s) 72
CfoI GCGC 2 cut(s) 181, 1586
Cfr10I RCCGGY 1 cut(s) 2766
Cfr13I GGNCC 5 cut(s) 320, 1331, 1874, 2315, 2518
CseI GACGC 2 cut(s) 281, 2216
Csp6I GTAC 5 cut(s) 377, 541, 1395, 2266, 2584
CviQI GTAC 5 cut(s) 377, 541, 1395, 2266, 2584
DdeI CTNAG 4 cut(s) 184, 881, 2628, 2678
DraI TTTAAA 5 cut(s) 804, 892, 1083, 1510, 2326
DrdI GACNNNNNNGTC 1 cut(s) 1640
DriI GACNNNNNGTC 1 cut(s) 2066
DseDI GACNNNNNNGTC 1 cut(s) 1640
EaeI YGGCCR 3 cut(s) 72, 1343, 2768
EagI CGGCCG 1 cut(s) 72
Eam1104I CTCTTC 3 cut(s) 17, 1219, 1225
Eam1105I GACNNNNNGTC 1 cut(s) 2066
EarI CTCTTC 3 cut(s) 17, 1219, 1225
Ecl136II GAGCTC 2 cut(s) 6, 429
EclXI CGGCCG 1 cut(s) 72
Eco130I CCWWGG 3 cut(s) 78, 316, 732
Eco24I GRGCYC 2 cut(s) 8, 431
Eco32I GATATC 1 cut(s) 965
Eco47I GGWCC 4 cut(s) 320, 1331, 1874, 2315
Eco47III AGCGCT 1 cut(s) 1585
Eco52I CGGCCG 1 cut(s) 72
Eco53kI GAGCTC 2 cut(s) 6, 429
Eco57I CTGAAG 1 cut(s) 407
Eco88I CYCGRG 2 cut(s) 581, 2823
EcoICRI GAGCTC 2 cut(s) 6, 429
EcoNI CCTNNNNNAGG 1 cut(s) 2616
EcoO109I RGGNCCY 1 cut(s) 2518
EcoRI GAATTC 2 cut(s) 826, 1282
EcoRII CCWGG 1 cut(s) 1959
EcoRV GATATC 1 cut(s) 965
EcoT14I CCWWGG 3 cut(s) 78, 316, 732
EcoT22I ATGCAT 2 cut(s) 1567, 1759
EcoT38I GRGCYC 2 cut(s) 8, 431
ErhI CCWWGG 3 cut(s) 78, 316, 732
FalI AAGNNNNNCTT 4 cut(s) 1605, 1637, 2585, 2617
FaqI GGGAC 3 cut(s) 503, 584, 1391
FauNDI CATATG 2 cut(s) 699, 1534
FbaI TGATCA 1 cut(s) 637
FblI GTMKAC 2 cut(s) 129, 2303
Fnu4HI GCNGC 9 cut(s) 72, 75, 84, 267, 276, 981, 1515, 1772, 2244
FokI GGATG 7 cut(s) 26, 516, 965, 1367, 1386, 1807, 2420
FriOI GRGCYC 2 cut(s) 8, 431
Fsp4HI GCNGC 9 cut(s) 72, 75, 84, 267, 276, 981, 1515, 1772, 2244
FspBI CTAG 5 cut(s) 219, 317, 681, 2030, 2487
GlaI GCGC 2 cut(s) 180, 1585
GluI GCNGC 9 cut(s) 72, 75, 84, 267, 276, 981, 1515, 1772, 2244
GsuI CTGGAG 1 cut(s) 2844
HaeII RGCGCY 2 cut(s) 182, 1587
HaeIII GGCC 4 cut(s) 74, 1345, 2520, 2770
HapII CCGG 4 cut(s) 1346, 1385, 1488, 2767
HgaI GACGC 2 cut(s) 281, 2216
HhaI GCGC 2 cut(s) 181, 1586
Hin6I GCGC 2 cut(s) 179, 1584
HinP1I GCGC 2 cut(s) 179, 1584
HincII GTYRAC 2 cut(s) 532, 2071
HindII GTYRAC 2 cut(s) 532, 2071
HindIII AAGCTT 3 cut(s) 878, 1024, 1900
HpaII CCGG 4 cut(s) 1346, 1385, 1488, 2767
HphI GGTGA 4 cut(s) 1477, 1963, 2111, 2745
Hpy166II GTNNAC 6 cut(s) 112, 130, 532, 1684, 2071, 2304
Hpy8I GTNNAC 6 cut(s) 112, 130, 532, 1684, 2071, 2304
HpyAV CCTTC 6 cut(s) 417, 1257, 1421, 1890, 2085, 2587
HpyCH4IV ACGT 5 cut(s) 114, 528, 1503, 2106, 2543
HpyF3I CTNAG 4 cut(s) 184, 881, 2628, 2678
HpySE526I ACGT 5 cut(s) 114, 528, 1503, 2106, 2543
HspAI GCGC 2 cut(s) 179, 1584
Ksp22I TGATCA 1 cut(s) 637
LguI GCTCTTC 1 cut(s) 1225
LmnI GCTCC 2 cut(s) 434, 1466
Lsp1109I GCAGC 6 cut(s) 95, 278, 287, 1501, 1783, 2230
MaeI CTAG 5 cut(s) 219, 317, 681, 2030, 2487
MaeII ACGT 5 cut(s) 114, 528, 1503, 2106, 2543
MaeIII GTNAC 7 cut(s) 239, 1450, 1483, 1527, 2005, 2456, 2569
MbiI CCGCTC 1 cut(s) 2121
MfeI CAATTG 3 cut(s) 1277, 1315, 2247
MflI RGATCY 5 cut(s) 283, 1031, 1069, 2186, 2658
MhlI GDGCHC 4 cut(s) 8, 431, 2497, 2731
MlyI GAGTC 5 cut(s) 452, 693, 1361, 1715, 2462
MmeI TCCRAC 6 cut(s) 930, 940, 1624, 2074, 2083, 2897
Mph1103I ATGCAT 2 cut(s) 1567, 1759
MroXI GAANNNNTTC 2 cut(s) 1048, 2868
MslI CAYNNNNRTG 4 cut(s) 173, 252, 2595, 2802
MspA1I CMGCKG 1 cut(s) 269
MspI CCGG 4 cut(s) 1346, 1385, 1488, 2767
MspR9I CCNGG 4 cut(s) 1347, 1385, 1489, 1961
MunI CAATTG 3 cut(s) 1277, 1315, 2247
Mva1269I GAATGC 1 cut(s) 1024
MvaI CCWGG 1 cut(s) 1961
NciI CCSGG 3 cut(s) 1347, 1385, 1489
NcoI CCATGG 1 cut(s) 78
NdeI CATATG 2 cut(s) 699, 1534
NlaIV GGNNCC 5 cut(s) 1333, 1579, 1787, 2519, 2623
NmuCI GTSAC 2 cut(s) 1483, 2005
NotI GCGGCCGC 1 cut(s) 72
NsiI ATGCAT 2 cut(s) 1567, 1759
NspI RCATGY 1 cut(s) 2600
NspV TTCGAA 1 cut(s) 2089
PaeR7I CTCGAG 1 cut(s) 581
PagI TCATGA 2 cut(s) 2254, 2737
PciSI GCTCTTC 1 cut(s) 1225
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1024
PdmI GAANNNNTTC 2 cut(s) 1048, 2868
PfeI GAWTC 5 cut(s) 16, 552, 815, 1555, 2615
PflMI CCANNNNNTGG 3 cut(s) 1259, 1341, 1374
PfoI TCCNGGA 1 cut(s) 1383
PkrI GCNGC 9 cut(s) 73, 76, 85, 268, 277, 982, 1516, 1773, 2245
PleI GAGTC 5 cut(s) 452, 692, 1360, 1714, 2462
PpsI GAGTC 5 cut(s) 452, 692, 1360, 1714, 2462
PshAI GACNNNNGTC 1 cut(s) 683
PshBI ATTAAT 1 cut(s) 354
PsiI TTATAA 1 cut(s) 1596
Psp124BI GAGCTC 2 cut(s) 8, 431
Psp6I CCWGG 1 cut(s) 1959
PspGI CCWGG 1 cut(s) 1959
PspN4I GGNNCC 5 cut(s) 1333, 1579, 1787, 2519, 2623
PspPI GGNCC 5 cut(s) 320, 1331, 1874, 2315, 2518
PspXI VCTCGAGB 1 cut(s) 581
PstI CTGCAG 1 cut(s) 1519
PsuI RGATCY 5 cut(s) 283, 1031, 1069, 2186, 2658
PvuII CAGCTG 1 cut(s) 269
RsaI GTAC 5 cut(s) 378, 542, 1396, 2267, 2585
RsaNI GTAC 5 cut(s) 377, 541, 1395, 2266, 2584
RseI CAYNNNNRTG 4 cut(s) 173, 252, 2595, 2802
SacI GAGCTC 2 cut(s) 8, 431
SapI GCTCTTC 1 cut(s) 1225
SatI GCNGC 9 cut(s) 72, 75, 84, 267, 276, 981, 1515, 1772, 2244
Sau96I GGNCC 5 cut(s) 320, 1331, 1874, 2315, 2518
SchI GAGTC 5 cut(s) 452, 693, 1361, 1715, 2462
ScrFI CCNGG 4 cut(s) 1347, 1385, 1489, 1961
SduI GDGCHC 4 cut(s) 8, 431, 2497, 2731
SfcI CTRYAG 2 cut(s) 1065, 1515
Sfr274I CTCGAG 1 cut(s) 581
SfuI TTCGAA 1 cut(s) 2089
SinI GGWCC 4 cut(s) 320, 1331, 1874, 2315
SlaI CTCGAG 1 cut(s) 581
SmiMI CAYNNNNRTG 4 cut(s) 173, 252, 2595, 2802
SmlI CTYRAG 4 cut(s) 581, 2174, 2504, 2730
SmoI CTYRAG 4 cut(s) 581, 2174, 2504, 2730
SsiI CCGC 4 cut(s) 71, 75, 980, 2121
SspI AATATT 3 cut(s) 2291, 2322, 2550
SspMI CTAG 5 cut(s) 219, 317, 681, 2030, 2487
SstI GAGCTC 2 cut(s) 8, 431
StyD4I CCNGG 4 cut(s) 1345, 1383, 1487, 1959
StyI CCWWGG 3 cut(s) 78, 316, 732
TaiI ACGT 5 cut(s) 117, 531, 1506, 2109, 2546
TaqI TCGA 6 cut(s) 8, 582, 607, 830, 1187, 2089
TauI GCSGC 3 cut(s) 74, 77, 983
TfiI GAWTC 5 cut(s) 16, 552, 815, 1555, 2615
TscAI CASTG 7 cut(s) 114, 1425, 1524, 2026, 2497, 2722, 2844
TseFI GTSAC 2 cut(s) 1483, 2005
TseI GCWGC 6 cut(s) 83, 266, 275, 1514, 1771, 2243
Tsp45I GTSAC 2 cut(s) 1483, 2005
TspGWI ACGGA 4 cut(s) 1351, 1718, 1859, 2420
TspRI CASTG 7 cut(s) 114, 1425, 1524, 2026, 2497, 2722, 2844
Van91I CCANNNNNTGG 3 cut(s) 1259, 1341, 1374
VpaK11BI GGWCC 4 cut(s) 320, 1331, 1874, 2315
VspI ATTAAT 1 cut(s) 354
XagI CCTNNNNNAGG 1 cut(s) 2616
XapI RAATTY 8 cut(s) 826, 887, 1282, 1459, 1627, 2359, 2398, 2479
XceI RCATGY 1 cut(s) 2600
XhoI CTCGAG 1 cut(s) 581
XmaJI CCTAGG 1 cut(s) 316
XmiI GTMKAC 2 cut(s) 129, 2303
XmnI GAANNNNTTC 2 cut(s) 1048, 2868
XspI CTAG 5 cut(s) 219, 317, 681, 2030, 2487
Zsp2I ATGCAT 2 cut(s) 1567, 1759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.