Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

23266741 .. 23271040

Gene Structure 4300 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00401030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGAGGGCTCAGGTTGGGAGGCAAGTGCCGATCTTGCTTCTGGCTAGTTTGTGCAAGTGCATCTTTCATCAAGGTCGCCAGGCAGGTGGGAGGCCGGATTCGACTGGATCGGTGACCATTGTGTGGTTGGACGCCAGAAAATCGACTTGCCCGGCGTCAAGGAAGCGTCGTGCTCTAGACTTGATAAAAAATATTGAAGTGAAAGCTATCATCATAGGGGCGGAATCATCAATCAAAGCCAACTTTGTAATTGATCTTGGAGATAAAGCTAAGGTGCCTATAATCTCATTTTCGACGGCAAAACCTTCCCTGACTTCTTTTCAGCGTTCATATTTTTTCCAAGTTGCAAAGAATGACTCATCTCAAGTGAAAGCCATTAGTGCCATAATTCAATCTTTTGGCTGGAATGAAGCAGTGCCCATTTTTGTCGACGATGAGTTTTGGGAGGGTACATTACCTTACATGATTAATGTTCTACAAGAAGTCGGTGCACGTATTCCCTACTGGAGTGTCATTCCTCTAATGGCCACTGATGACCAAATTGTTGCGAAGCTTCAACATCTCATGACAATGAAAGCAAGGGTATTCATTGTACACATGTTGCCTTCTCTTGGCTCCCGGCTTTTTGCCAAGGCAAAAGAGATGGGCATGATGGGTGAAGGTTATGTTTGGATAATGACAGATGGAATGACCAACTCTTTTGGTTCCATAAATTCTTCTGTCACAGATAACATGCAAGGTGTGTTAGCATTAAGAACTTATGTTCCAAATACAGAAGAGCTTGAAAATTTCAGAGTCCGATGGCACAGAAAATTCCAAATGGAGAATCCAACCATCCTTAATGTTAGATCGGATGATATTTTTGGACTGTGGGCTTATGATGCTGCTTGGGCACTAGCCATGGCAGTTGAGAAGGTTATAAATTCTACTTTCAACTTTCAAAAGGTGAACATTTCTGGCAGTTCCACTGATCTAGAACGATTAGGGGTCTCTGAAAGTGGTCCTGAACTCGTCCAAGCACTATCAACGACAAAATTCAGAGGCCTTTCTGGAAATTTCAGTCTTCTTAATGGACAATTACAATCTTCAATTTTTGAGATAATCAATGTGAATGGTAATGGGGTAAGAGGAGTTGGATATTGGACACCCAAAAATGGACTTGTTAGAAATTTAAATTCAGCAAGCAGCGGATATTCTAGTTCTACTTCCAATCCCAGTGACCTTGGACTTATTATATGGCCCGGAGACACCATCACCATTCCAAAAGGTTGGCAGATTCCTAACCATGGGAATAAGTTGAAAATTCTAGTTCCAGTGAAGCATGGGTTTAAAGAATTTGTAAATGTGACAGGGGATCCTACAACTAACACAACCACGGTCACTGGATATTGCATAGACATTTTTAAAGCAGTAATCGAAGAATTACCATATGCTGTTTCTTATGAATTTTATCCCTTTGTAAAGCCTAATGGTGAACCAGCTGGCAGCTACGAGGATTTGATCTCTCAAGTGTTTCTTGGGAACTATGATGCAGCAGTTGGAGATATAACCATTAGAGCAAATAGGTCATCGTCGGTTGACTTTACATTGCCATACACAGAATCTGGAGTATCAATGGTGGTGCCTATCAAAGTGAAGAAAAGTAGGCAAAGTGCATTGGTGTTCTTGAAGCCTTTTACTTGGGACCTTTGGGTAACAAGCTGTTGCTTTTTCTTTGTCATTGGGTTTGTGATCTGGGTTCTTGAACACCGATTGAATGAAGATTTTCGTGGGCCTCCGTCACACCAGATTGGTACAACCTTTTGGTTTTCTTTCTCAACCATGGTTTTTGCACAACAACTTTTGACAAATGAACTGGGATTTCATGTGGAAAAGCTTAGGGCATATAGGTCTGGAGAAGATCTGGCTCAACTGTTTGAGAAAGGGACAATTTCTGCTGCTTTTGATGAAACCCCTTTCATGAACCTTTTCCTTTCAACTTATTGCTCAAAATATACCATGGTTGAGCCAATACTATCCAAAACTGGCAGCGGCTTTGCATTTATTTCATACATGACTTTATGCTGCAGCTCTAAGAATATATATATATATATATATATATATATATATATATATATGTTATATAATATTGTTTCTTTGATTTTGTACCTGCAGGCCTTTACGAAAGGTGTGCCTCTTACACTTGATGTTTCAAGAATGATCACTAAATTGCAAGAGGGAGGTAAAATGAAAACTGTCATGGACAAGTGGTTCAAGAAAGAAGCAAGTTGTACATACCCCAGCATAGACACTAATTCCAACAGTCCTCTTAGCCTTGATAGCCTTTGGGGTCTTTTCCTTATTGTTGGAGTTACTTCGTCATCAGCTCTTCTGATACATGTAGCTATGGTCTTCTATCAGAATCGGCACGTCTTGATACCCTCGGATCCAGAACTCTCTCTTTGGAGGAAAATGAGTCTCCTATTACGGATATTCGACCAAAGAGACCTACCTTCGCATACTTTTTGGCGCAGGCGCAGGGATCAGCAAGATAATGCTCAAGCTAGAGCTTCAGTTGATTCCTCACCGAACATCATAACCAATAGCTTGCCAAGGCCATCAGATTTTTCACACCACGCAAGTTCAGATATTACTGATTTTGAAATGCAGGAAACACCTTCTAGTTCTACCAACGGGGATTTGAATCCCAGTGGTCAAGCCATCCAAGAGACTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

905

Amino Acids

101.31

Weight (kDa)

8.3

Isoelectric Point (pI)

38.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	53 - 373	5.4e-71	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	451 - 541	5.3e-11	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	456 - 752	7.7e-11	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	560 - 611	1.3e-09	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	920
AarI	CACCTGC	1 cut(s)	74
Acc36I	ACCTGC	2 cut(s)	74, 2157
AccB1I	GGYRCC	2 cut(s)	274, 1621
AccB7I	CCANNNNNTGG	1 cut(s)	123
AccI	GTMKAC	1 cut(s)	429
AciI	CCGC	3 cut(s)	221, 1188, 2031
AclWI	GGATC	6 cut(s)	115, 1349, 1362, 2420, 2433, 2529
AcoI	YGGCCR	1 cut(s)	525
AcuI	CTGAAG	1 cut(s)	2535
AcyI	GRCGYC	2 cut(s)	132, 155
AfaI	GTAC	5 cut(s)	451, 594, 1795, 2147, 2272
AfiI	CCNNNNNNNGG	4 cut(s)	123, 611, 1154, 1286
AflIII	ACRYGT	2 cut(s)	597, 2377
AjiI	CACGTC	1 cut(s)	2410
AjnI	CCWGG	1 cut(s)	78
AloI	GAACNNNNNNTCC	4 cut(s)	748, 780, 2234, 2266
Alw21I	GWGCWC	2 cut(s)	175, 493
Alw26I	GTCTC	5 cut(s)	994, 1239, 2462, 2478, 2702
Alw44I	GTGCAC	1 cut(s)	489
AlwI	GGATC	6 cut(s)	115, 1349, 1362, 2420, 2433, 2529
AlwNI	CAGNNNCTG	1 cut(s)	1604
AoxI	GGCC	7 cut(s)	92, 525, 1042, 1238, 1772, 2154, 2594
ApaLI	GTGCAC	1 cut(s)	489
ApeKI	GCWGC	8 cut(s)	884, 1185, 1485, 1532, 1937, 2028, 2064, 2067
AseI	ATTAAT	1 cut(s)	468
Asp700I	GAANNNNTTC	2 cut(s)	1764, 1967
AspLEI	GCGC	2 cut(s)	2511, 2517
AspS9I	GGNCC	4 cut(s)	1001, 1239, 1684, 1772
AsuC2I	CCSGG	3 cut(s)	152, 619, 1242
AsuHPI	GGTGA	6 cut(s)	124, 668, 958, 1246, 1484, 2556
AvaII	GGWCC	2 cut(s)	1001, 1684
BaeGI	GKGCMC	3 cut(s)	420, 493, 895
BalI	TGGCCA	1 cut(s)	527
BamHI	GGATCC	2 cut(s)	1354, 2425
BanI	GGYRCC	2 cut(s)	274, 1621
BanII	GRGCYC	1 cut(s)	10
BbsI	GAAGAC	2 cut(s)	1055, 2383
Bbv12I	GWGCWC	2 cut(s)	175, 493
BbvI	GCAGC	8 cut(s)	871, 1197, 1497, 1544, 1924, 2040, 2051, 2079
BccI	CCATC	8 cut(s)	637, 646, 677, 795, 842, 1259, 2605, 2708
BceAI	ACGGC	1 cut(s)	312
BcgI	CGANNNNNNTGC	2 cut(s)	2152, 2186
BciT130I	CCWGG	1 cut(s)	80
BclI	TGATCA	1 cut(s)	2199
BcnI	CCSGG	3 cut(s)	152, 619, 1242
BcoDI	GTCTC	5 cut(s)	994, 1239, 2462, 2478, 2702
BfaI	CTAG	8 cut(s)	45, 176, 896, 974, 1197, 1307, 2544, 2661
BfmI	CTRYAG	2 cut(s)	2065, 2150
BfuAI	ACCTGC	2 cut(s)	74, 2157
BglII	AGATCT	1 cut(s)	1900
BisI	GCNGC	9 cut(s)	885, 1186, 1486, 1533, 1938, 2029, 2032, 2065, 2068
BlsI	GCNGC	9 cut(s)	886, 1187, 1487, 1534, 1939, 2030, 2033, 2066, 2069
Bme1390I	CCNGG	4 cut(s)	80, 152, 619, 1242
Bme18I	GGWCC	2 cut(s)	1001, 1684
BmgBI	CACGTC	1 cut(s)	2410
BmgT120I	GGNCC	4 cut(s)	1001, 1239, 1684, 1772
BmiI	GGNNCC	7 cut(s)	276, 616, 706, 1356, 1623, 1685, 2427
BmrFI	CCNGG	4 cut(s)	80, 152, 619, 1242
BmrI	ACTGGG	3 cut(s)	1209, 1865, 2682
BmsI	GCATC	3 cut(s)	69, 871, 1519
BmuI	ACTGGG	3 cut(s)	1209, 1865, 2682
BpiI	GAAGAC	2 cut(s)	1055, 2383
BpmI	CTGGAG	3 cut(s)	526, 1626, 1914
Bpu10I	CCTNAGC	3 cut(s)	9, 270, 1877
BpuEI	CTTGAG	3 cut(s)	348, 1491, 2523
BpuMI	CCSGG	3 cut(s)	152, 619, 1242
BsaAI	YACGTR	1 cut(s)	494
BsaBI	GATNNNNATC	1 cut(s)	2682
BsaHI	GRCGYC	2 cut(s)	132, 155
BsaI	GGTCTC	2 cut(s)	994, 2478
BsaJI	CCNNGG	9 cut(s)	630, 900, 1222, 1285, 1374, 1821, 1998, 2421, 2591
Bsc4I	CCNNNNNNNGG	4 cut(s)	123, 611, 1154, 1286
Bse1I	ACTGG	8 cut(s)	109, 509, 1215, 1313, 1387, 1860, 2029, 2688
Bse3DI	GCAATG	1 cut(s)	1586
Bse8I	GATNNNNATC	1 cut(s)	2682
BseBI	CCWGG	1 cut(s)	80
BseDI	CCNNGG	9 cut(s)	630, 900, 1222, 1285, 1374, 1821, 1998, 2421, 2591
BseGI	GGATG	3 cut(s)	834, 859, 2700
BseJI	GATNNNNATC	1 cut(s)	2682
BseLI	CCNNNNNNNGG	4 cut(s)	123, 611, 1154, 1286
BseMI	GCAATG	1 cut(s)	1586
BseMII	CTCAG	1 cut(s)	23
BseNI	ACTGG	8 cut(s)	109, 509, 1215, 1313, 1387, 1860, 2029, 2688
BseRI	GAGGAG	1 cut(s)	1143
BseSI	GKGCMC	3 cut(s)	420, 493, 895
BseXI	GCAGC	8 cut(s)	871, 1197, 1497, 1544, 1924, 2040, 2051, 2079
BseYI	CCCAGC	1 cut(s)	2279
BshFI	GGCC	7 cut(s)	94, 527, 1044, 1240, 1774, 2156, 2596
BshNI	GGYRCC	2 cut(s)	274, 1621
BsiHKAI	GWGCWC	2 cut(s)	175, 493
BsiSI	CCGG	4 cut(s)	95, 152, 619, 1242
BslFI	GGGAC	2 cut(s)	1697, 1939
BslI	CCNNNNNNNGG	4 cut(s)	123, 611, 1154, 1286
BsmAI	GTCTC	5 cut(s)	994, 1239, 2462, 2478, 2702
BsmFI	GGGAC	2 cut(s)	1697, 1939
BsnI	GGCC	7 cut(s)	94, 527, 1044, 1240, 1774, 2156, 2596
Bso31I	GGTCTC	2 cut(s)	994, 2478
Bsp1286I	GDGCHC	5 cut(s)	10, 175, 420, 493, 895
Bsp1407I	TGTACA	2 cut(s)	592, 2270
Bsp19I	CCATGG	4 cut(s)	900, 1285, 1821, 1998
BspACI	CCGC	3 cut(s)	221, 1188, 2031
BspANI	GGCC	7 cut(s)	94, 527, 1044, 1240, 1774, 2156, 2596
BspCNI	CTCAG	1 cut(s)	22
BspHI	TCATGA	2 cut(s)	564, 1959
BspLI	GGNNCC	7 cut(s)	276, 616, 706, 1356, 1623, 1685, 2427
BspMAI	CTGCAG	2 cut(s)	2069, 2154
BspMI	ACCTGC	2 cut(s)	74, 2157
BspPI	GGATC	6 cut(s)	115, 1349, 1362, 2420, 2433, 2529
BspQI	GCTCTTC	2 cut(s)	771, 2373
BspT107I	GGYRCC	2 cut(s)	274, 1621
BspTNI	GGTCTC	2 cut(s)	994, 2478
BsrDI	GCAATG	1 cut(s)	1586
BsrGI	TGTACA	2 cut(s)	592, 2270
BsrI	ACTGG	8 cut(s)	109, 509, 1215, 1313, 1387, 1860, 2029, 2688
BssECI	CCNNGG	9 cut(s)	630, 900, 1222, 1285, 1374, 1821, 1998, 2421, 2591
BssNI	GRCGYC	2 cut(s)	132, 155
BssT1I	CCWWGG	7 cut(s)	630, 900, 1222, 1285, 1821, 1998, 2591
Bst2UI	CCWGG	1 cut(s)	80
Bst4CI	ACNGT	5 cut(s)	870, 1378, 1914, 2236, 2303
Bst6I	CTCTTC	2 cut(s)	771, 2373
BstACI	GRCGYC	2 cut(s)	132, 155
BstAUI	TGTACA	2 cut(s)	592, 2270
BstBAI	YACGTR	1 cut(s)	494
BstC8I	GCNNGC	5 cut(s)	1183, 1483, 2154, 2513, 2588
BstDEI	CTNAG	5 cut(s)	9, 270, 1877, 2073, 2309
BstDSI	CCRYGG	5 cut(s)	900, 1285, 1374, 1821, 1998
BstEII	GGTNACC	1 cut(s)	112
BstF5I	GGATG	3 cut(s)	834, 859, 2700
BstHHI	GCGC	2 cut(s)	2511, 2517
BstMAI	GTCTC	5 cut(s)	994, 1239, 2462, 2478, 2702
BstMWI	GCNNNNNNNGC	5 cut(s)	34, 380, 881, 890, 2319
BstNI	CCWGG	1 cut(s)	80
BstNSI	RCATGY	3 cut(s)	601, 736, 2381
BstPI	GGTNACC	1 cut(s)	112
BstSCI	CCNGG	4 cut(s)	78, 150, 617, 1240
BstSFI	CTRYAG	2 cut(s)	2065, 2150
BstSLI	GKGCMC	3 cut(s)	420, 493, 895
BstV1I	GCAGC	8 cut(s)	871, 1197, 1497, 1544, 1924, 2040, 2051, 2079
BstV2I	GAAGAC	2 cut(s)	1055, 2383
BstX2I	RGATCY	3 cut(s)	1354, 1900, 2425
BstXI	CCANNNNNNTGG	2 cut(s)	86, 1269
BstYI	RGATCY	3 cut(s)	1354, 1900, 2425
BsuRI	GGCC	7 cut(s)	94, 527, 1044, 1240, 1774, 2156, 2596
BtgI	CCRYGG	5 cut(s)	900, 1285, 1374, 1821, 1998
BtrI	CACGTC	1 cut(s)	2410
BtsCI	GGATG	3 cut(s)	834, 859, 2700
BtsI	GCAGTG	1 cut(s)	420
BtsIMutI	CAGTG	7 cut(s)	420, 528, 966, 1222, 1320, 1380, 2695
BveI	ACCTGC	2 cut(s)	74, 2157
Cac8I	GCNNGC	5 cut(s)	1183, 1483, 2154, 2513, 2588
CaiI	CAGNNNCTG	1 cut(s)	1604
CciI	TCATGA	2 cut(s)	564, 1959
CfoI	GCGC	2 cut(s)	2511, 2517
Cfr13I	GGNCC	4 cut(s)	1001, 1239, 1684, 1772
CseI	GACGC	3 cut(s)	140, 144, 155
Csp6I	GTAC	5 cut(s)	450, 593, 1794, 2146, 2271
CviQI	GTAC	5 cut(s)	450, 593, 1794, 2146, 2271
DdeI	CTNAG	5 cut(s)	9, 270, 1877, 2073, 2309
DraI	TTTAAA	3 cut(s)	1173, 1330, 1405
EaeI	YGGCCR	1 cut(s)	525
Eam1104I	CTCTTC	2 cut(s)	771, 2373
EarI	CTCTTC	2 cut(s)	771, 2373
EciI	GGCGGA	1 cut(s)	236
Eco130I	CCWWGG	7 cut(s)	630, 900, 1222, 1285, 1821, 1998, 2591
Eco147I	AGGCCT	2 cut(s)	1044, 2156
Eco24I	GRGCYC	1 cut(s)	10
Eco31I	GGTCTC	2 cut(s)	994, 2478
Eco47I	GGWCC	2 cut(s)	1001, 1684
Eco57I	CTGAAG	1 cut(s)	2535
Eco91I	GGTNACC	1 cut(s)	112
EcoO109I	RGGNCCY	1 cut(s)	1684
EcoO65I	GGTNACC	1 cut(s)	112
EcoRII	CCWGG	1 cut(s)	78
EcoT14I	CCWWGG	7 cut(s)	630, 900, 1222, 1285, 1821, 1998, 2591
EcoT38I	GRGCYC	1 cut(s)	10
ErhI	CCWWGG	7 cut(s)	630, 900, 1222, 1285, 1821, 1998, 2591
FalI	AAGNNNNNCTT	4 cut(s)	47, 79, 1500, 1532
FaqI	GGGAC	2 cut(s)	1697, 1939
FauNDI	CATATG	1 cut(s)	1429
FbaI	TGATCA	1 cut(s)	2199
FblI	GTMKAC	1 cut(s)	429
Fnu4HI	GCNGC	9 cut(s)	885, 1186, 1486, 1533, 1938, 2029, 2032, 2065, 2068
FokI	GGATG	3 cut(s)	821, 866, 2687
FriOI	GRGCYC	1 cut(s)	10
Fsp4HI	GCNGC	9 cut(s)	885, 1186, 1486, 1533, 1938, 2029, 2032, 2065, 2068
FspBI	CTAG	8 cut(s)	45, 176, 896, 974, 1197, 1307, 2544, 2661
GlaI	GCGC	2 cut(s)	2510, 2516
GluI	GCNGC	9 cut(s)	885, 1186, 1486, 1533, 1938, 2029, 2032, 2065, 2068
GsaI	CCCAGC	1 cut(s)	2283
GsuI	CTGGAG	3 cut(s)	526, 1626, 1914
HaeIII	GGCC	7 cut(s)	94, 527, 1044, 1240, 1774, 2156, 2596
HapII	CCGG	4 cut(s)	95, 152, 619, 1242
HgaI	GACGC	3 cut(s)	140, 144, 155
HhaI	GCGC	2 cut(s)	2511, 2517
Hin1I	GRCGYC	2 cut(s)	132, 155
Hin6I	GCGC	2 cut(s)	2509, 2515
HinP1I	GCGC	2 cut(s)	2509, 2515
HincII	GTYRAC	2 cut(s)	430, 1579
HindII	GTYRAC	2 cut(s)	430, 1579
HindIII	AAGCTT	2 cut(s)	551, 1874
HpaII	CCGG	4 cut(s)	95, 152, 619, 1242
HphI	GGTGA	6 cut(s)	124, 668, 958, 1246, 1484, 2556
Hpy166II	GTNNAC	6 cut(s)	430, 491, 595, 949, 1475, 1579
Hpy8I	GTNNAC	6 cut(s)	430, 491, 595, 949, 1475, 1579
Hpy99I	CGWCG	4 cut(s)	171, 298, 434, 1576
HpyAV	CCTTC	6 cut(s)	315, 615, 653, 907, 2502, 2667
HpyCH4III	ACNGT	5 cut(s)	870, 1378, 1914, 2236, 2303
HpyCH4IV	ACGT	2 cut(s)	493, 2409
HpyF10VI	GCNNNNNNNGC	5 cut(s)	34, 380, 881, 890, 2319
HpyF3I	CTNAG	5 cut(s)	9, 270, 1877, 2073, 2309
HpySE526I	ACGT	2 cut(s)	493, 2409
Hsp92I	GRCGYC	2 cut(s)	132, 155
HspAI	GCGC	2 cut(s)	2509, 2515
Ksp22I	TGATCA	1 cut(s)	2199
LguI	GCTCTTC	2 cut(s)	771, 2373
LmnI	GCTCC	1 cut(s)	620
Lsp1109I	GCAGC	8 cut(s)	871, 1197, 1497, 1544, 1924, 2040, 2051, 2079
LweI	GCATC	3 cut(s)	69, 871, 1519
MaeI	CTAG	8 cut(s)	45, 176, 896, 974, 1197, 1307, 2544, 2661
MaeII	ACGT	2 cut(s)	493, 2409
MaeIII	GTNAC	8 cut(s)	112, 721, 1217, 1345, 1378, 1693, 1779, 2350
MflI	RGATCY	3 cut(s)	1354, 1900, 2425
MhlI	GDGCHC	5 cut(s)	10, 175, 420, 493, 895
MlsI	TGGCCA	1 cut(s)	527
MluNI	TGGCCA	1 cut(s)	527
MlyI	GAGTC	4 cut(s)	350, 804, 2464, 2704
MmeI	TCCRAC	6 cut(s)	108, 854, 1114, 1519, 2322, 2326
Mox20I	TGGCCA	1 cut(s)	527
MroXI	GAANNNNTTC	2 cut(s)	1764, 1967
MscI	TGGCCA	1 cut(s)	527
MseI	TTAA	7 cut(s)	468, 752, 840, 1068, 1172, 1329, 1404
MslI	CAYNNNNRTG	1 cut(s)	569
Msp20I	TGGCCA	1 cut(s)	527
MspA1I	CMGCKG	3 cut(s)	1188, 1481, 2031
MspI	CCGG	4 cut(s)	95, 152, 619, 1242
MspR9I	CCNGG	4 cut(s)	80, 152, 619, 1242
MvaI	CCWGG	1 cut(s)	80
MwoI	GCNNNNNNNGC	5 cut(s)	34, 380, 881, 890, 2319
NciI	CCSGG	3 cut(s)	152, 619, 1242
NcoI	CCATGG	4 cut(s)	900, 1285, 1821, 1998
NdeI	CATATG	1 cut(s)	1429
NlaIV	GGNNCC	7 cut(s)	276, 616, 706, 1356, 1623, 1685, 2427
NmuCI	GTSAC	6 cut(s)	112, 721, 1217, 1345, 1378, 1779
NspI	RCATGY	3 cut(s)	601, 736, 2381
PagI	TCATGA	2 cut(s)	564, 1959
PaqCI	CACCTGC	1 cut(s)	74
PceI	AGGCCT	2 cut(s)	1044, 2156
PciI	ACATGT	2 cut(s)	597, 2377
PciSI	GCTCTTC	2 cut(s)	771, 2373
PdmI	GAANNNNTTC	2 cut(s)	1764, 1967
PfeI	GAWTC	8 cut(s)	98, 224, 826, 1276, 1601, 2401, 2558, 2683
PflMI	CCANNNNNTGG	1 cut(s)	123
PkrI	GCNGC	9 cut(s)	886, 1187, 1487, 1534, 1939, 2030, 2033, 2066, 2069
PleI	GAGTC	4 cut(s)	350, 803, 2463, 2704
PpsI	GAGTC	4 cut(s)	350, 803, 2463, 2704
Ppu21I	YACGTR	1 cut(s)	494
PpuMI	RGGWCCY	1 cut(s)	1684
PscI	ACATGT	2 cut(s)	597, 2377
PshBI	ATTAAT	1 cut(s)	468
PsiI	TTATAA	1 cut(s)	920
Psp5II	RGGWCCY	1 cut(s)	1684
Psp6I	CCWGG	1 cut(s)	78
PspEI	GGTNACC	1 cut(s)	112
PspFI	CCCAGC	1 cut(s)	2279
PspGI	CCWGG	1 cut(s)	78
PspN4I	GGNNCC	7 cut(s)	276, 616, 706, 1356, 1623, 1685, 2427
PspPI	GGNCC	4 cut(s)	1001, 1239, 1684, 1772
PspPPI	RGGWCCY	1 cut(s)	1684
PstI	CTGCAG	2 cut(s)	2069, 2154
PstNI	CAGNNNCTG	1 cut(s)	1604
PsuI	RGATCY	3 cut(s)	1354, 1900, 2425
PvuII	CAGCTG	1 cut(s)	1481
RsaI	GTAC	5 cut(s)	451, 594, 1795, 2147, 2272
RsaNI	GTAC	5 cut(s)	450, 593, 1794, 2146, 2271
RseI	CAYNNNNRTG	1 cut(s)	569
SalI	GTCGAC	1 cut(s)	428
SapI	GCTCTTC	2 cut(s)	771, 2373
SaqAI	TTAA	7 cut(s)	468, 752, 840, 1068, 1172, 1329, 1404
SatI	GCNGC	9 cut(s)	885, 1186, 1486, 1533, 1938, 2029, 2032, 2065, 2068
Sau96I	GGNCC	4 cut(s)	1001, 1239, 1684, 1772
SbfI	CCTGCAGG	1 cut(s)	2154
SchI	GAGTC	4 cut(s)	350, 804, 2464, 2704
ScrFI	CCNGG	4 cut(s)	80, 152, 619, 1242
SdaI	CCTGCAGG	1 cut(s)	2154
SduI	GDGCHC	5 cut(s)	10, 175, 420, 493, 895
SfaNI	GCATC	3 cut(s)	69, 871, 1519
SfcI	CTRYAG	2 cut(s)	2065, 2150
SinI	GGWCC	2 cut(s)	1001, 1684
SmiI	ATTTAAAT	1 cut(s)	1173
SmiMI	CAYNNNNRTG	1 cut(s)	569
SmlI	CTYRAG	3 cut(s)	363, 1506, 2538
SmoI	CTYRAG	3 cut(s)	363, 1506, 2538
Sse8387I	CCTGCAGG	1 cut(s)	2154
SseBI	AGGCCT	2 cut(s)	1044, 2156
SsiI	CCGC	3 cut(s)	221, 1188, 2031
SspI	AATATT	2 cut(s)	193, 2128
SspMI	CTAG	8 cut(s)	45, 176, 896, 974, 1197, 1307, 2544, 2661
StuI	AGGCCT	2 cut(s)	1044, 2156
StyD4I	CCNGG	4 cut(s)	78, 150, 617, 1240
StyI	CCWWGG	7 cut(s)	630, 900, 1222, 1285, 1821, 1998, 2591
SwaI	ATTTAAAT	1 cut(s)	1173
TaaI	ACNGT	5 cut(s)	870, 1378, 1914, 2236, 2303
TaiI	ACGT	2 cut(s)	496, 2412
TaqI	TCGA	7 cut(s)	101, 143, 293, 429, 1416, 2475, 2713
TatI	WGTACW	2 cut(s)	592, 2270
TauI	GCSGC	1 cut(s)	2034
TfiI	GAWTC	8 cut(s)	98, 224, 826, 1276, 1601, 2401, 2558, 2683
Tru1I	TTAA	7 cut(s)	468, 752, 840, 1068, 1172, 1329, 1404
Tru9I	TTAA	7 cut(s)	468, 752, 840, 1068, 1172, 1329, 1404
TscAI	CASTG	7 cut(s)	420, 535, 973, 1222, 1320, 1387, 2695
TseFI	GTSAC	6 cut(s)	112, 721, 1217, 1345, 1378, 1779
TseI	GCWGC	8 cut(s)	884, 1185, 1485, 1532, 1937, 2028, 2064, 2067
Tsp45I	GTSAC	6 cut(s)	112, 721, 1217, 1345, 1378, 1779
TspGWI	ACGGA	2 cut(s)	1767, 2482
TspRI	CASTG	7 cut(s)	420, 535, 973, 1222, 1320, 1387, 2695
Van91I	CCANNNNNTGG	1 cut(s)	123
VneI	GTGCAC	1 cut(s)	489
VpaK11BI	GGWCC	2 cut(s)	1001, 1684
VspI	ATTAAT	1 cut(s)	468
XbaI	TCTAGA	2 cut(s)	175, 973
XceI	RCATGY	3 cut(s)	601, 736, 2381
XcmI	CCANNNNNNNNNTGG	1 cut(s)	124
XmiI	GTMKAC	1 cut(s)	429
XmnI	GAANNNNTTC	2 cut(s)	1764, 1967
XspI	CTAG	8 cut(s)	45, 176, 896, 974, 1197, 1307, 2544, 2661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.