Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0000051

Physical Location & Seq

Genomic Coordinates Forward (+)

2577871 .. 2581941

Gene Structure 4071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g04300.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3363 bp

ATGGATAATATACCTATCGTGAGTTATGAAACCCAACTAAAAGATGTGATACATGTTGATTTTAAAAATGAAAATAAAATATATGAACGTGAAGAAATAATTAAAGATTTAATTAAGAAGAGATTTAATTCCTATAATTGGTTCAAAAATTGGATTCATATCAAGTTTTCACTTCTTTTTAAATTCCGTGCAATCCTAACTTCCACTTTTTTTTATTGGGACACAGCTCTAGATCTGATAAACAATTTAGAAGTGCAAGCAATCCTTGGCCCAGTGACATCAATGCAGGCAAGCTTCGTTGCTAATCTTGGAGACCGAGCTAATGTGCCCATTGTATCATTTTCTGCAACAAGCCCTTCTCTTACTTCACTCCAAAGCTCTTACTTCTTCCGAATTGCACAAACCGACTCTCACCAAGTGCAAGCCATAAGTGCCATTGTTAAAAATTTCGCCTGGAGACAAGTTGTGCCAATTTACGCAGACAATACGTACGGAGAAGGAATCATACCCCTTTTAACTGATGCATTACATGAGGTTGATGCTCATGTCCCTCATCGGTGTGTCATTCCCCCATCAGCCACTGATGAACAAATTGGCAGCGAGCTTTACAAGTTGATGACAATGCAAACTAGAGTCTTCATCGTGCACATGTTGCCCAAACATTGCTCTAAGCTATTTGCCAAGGCAAAAGAAATTGGAATGATGAGTAAAGACTACGTTTGGATTGTGACCAACGGAGTAGCAAATCATTTATGGTCTATGCATCCAGTCATCCTAAATTCAATGCAAGGAGTCTTAGGAGTTGAAACTTATGTTCAGAGAACAAAGGAGCTCCAAGAGTTCAAAATGCGGCGGAAAAAGCAATTCCAACAAGACAATCCAGCCATCATGGAAGTTGATGTAGATGTGTTTGGACTTTGGGCTTATGATGCCACTTTTGCTCTAGCTTTGGCAGTTGAAGAAGTTGGAATTAATGCAAGCTTGGGATTCCAAAAGAGGAATTCATCCTTCAATTCGACAGATCTTAATACTTTCAAGGTCTCTCAATATGGATCACAACTTGCCCAAGCCTTATCTAGTACTTCATTCAAAGGCATAGCTGGTGACTTCAGTCTTAAAGATGGGCAACTTCAATCATCAACCTTTAAGATAGTTAATTTAAATCGTTATAAGGTAAGAACAATAGCATTTTGGACACCGGAAAGTGGAATGGTGAAAACATTGAATTCAACAAACACTAGTACACCTTCAATTTCGAGGATGTTTAATTTTGGAGATAAGATTATATGGCCAGGAGATTCTCTCTCTGTTCCAAGGGGATGGGAGATCCCAATAAAAGGCACGAAGTTGAGGATTGGAGTACCTGTGAAGTTTGCTTTTACTGAGTTTGTTACGGTAACCAAGGATTCTAGCACTAATAAAACAGATGTCACTGGGTTTAGTATCGATGTCTTTAGGGCTGCAGTGGAACTGTTACCTTACCCCCTTCCTTTCGAGCTCATTCCCTTTGCAAAGCTGGATGACACCAGTGCTGGCACTTACAACGATTTGGTCCATCAAGTATATCTTCAGGCACTGTTTGATGCTGTGGTGGGAGATATAACAATTAGAGCAAATAGATCTTTATATGTGGACTTTACAATGCCATATACAGAATCCGGTGTAGTCATGGTTGTGCCAATCACCGACACCAGGAGCAAAAGTGCATGGGTTTTTTTAAAGCCTCTGACATGGGACCTATGGCTTACAACTTTTTGTTTCTTCATCTTCATTGGCTTTGTAATTTGGGTGCTTGAACATCGAATTAACGAAGATTTTCGGGGTCCTCCCTCACACCAAGTTGGCACAAGCTTTTTCTTCTCTTTCTCAACCATGGTCTTTTCAAATAGTAAGTATATTCATATCACCTCTCCCAAATTTCGATTGTTATTCACTATTATAGGGGAGAGAGTGGTTAGCAACTTGGGTAGATTCTTGATGGCTATATGGATATTTGTTGTGCTAGTTTTGACACAAAGCTACACAGCTAATCTAGCATCACTACTAACGACTGAGCAGGTGCGGCCAACCGTCACGGATATAAAGGATCTTCTAAGGAATGGGGACAATGTCGGCTACATGAAGAATTCTTTCGTCTATGAACTTTTGAAACAAGTCGGTTTTGATGAGTCCAAGCTGAAGGCTATGAAATCCACGGAAGATTGTGCTGAGGCTCTTTCCAAAGGGAGCAAAAGTGGTGGCATTACTGCTTTTGTTAATGAAACCCCCAACATGAAGCTTTTTCTTGCAAAATATTGTTCCAAATATACCATGATTGGTCCTATCTTCAAAACGGATGTTTGCATTTTCTCATGCTCTACTCCGTTACAACATATGCCAGCAAAAGATGATGACTTTTTCGAGGTGTCTTTGCAGGTGTTTCCAAAGCATTCTCCTTTTGTGCCTGATATTTCACGGGCGATCCTAAACGTGACAGAAGGAGAAAAGATGAAGAAAATTGAAAGCAAATGGTTCGCCCAAGAAATCGATTGTGAAGATAACTCCAGCACTCCAAGTTTTTCAAGCGGCAGTCTTGGCCTTGAAAGCTTTTGGGGCCTATTCCTCATTGTCGGGTTGACGTCAATTCTCGCGCTAGTCATCTTTGTAGCTTCATTCCTTTACAATCATAGGCATATATTGGAGCACCCTAATTCAAGAGCTTCAAGATGGAGAAGGATTCGAGCCATGATTAGAATTTTCAACGAAAAAGACCTCAACTCCCACAAAAGCAGTCAACAACGAGATGGAATTGCTCGTGGTGGAGATGAAGTTAAGGCATCACCTGATAGCAACTGGCTGGAAGGTTCATTCAGCAATTTGAACCACACAGATGAGGATTTGGGATTGTATGAAGGGCAACAAACTCCATCGACTACTGGTTATTCGTCTCCGGGGATAGTTCCAATAATTCAGCTCAAAACATTGTGGCCTAGAATAACCTGTTTATATAAGTTAATCAGAATTTCTGAATCTCTCCATCCACCTTCACATTCCTTTAATTCTTTATTATTAAAACAATTCAAATATTTAGATATATATATATATATATATATATTTATGGGCGTAGCCACACTGAGTGCAGCAGATGTATGCTCTCCTATGCACTCGAGTTCAAGTCTTCTTTTATATATAGGTCCTGTAGCGCGTAGTCAAGATTCAAGAGTAGTATGCTTCAACTTTGAATTTGAGTCCAATTTGTCAATGTTTTTCGTTATTCTTCTTTTACTTGTATTAATCTATACATTATTCATAATTAATACCCAGTTGAGAGCTTTCGGTGTACATTTCCTAATTGTTCTCTCCAATCTATCATTTTTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015085 GO:0015267 GO:0015318 GO:0016020 GO:0019722 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0034220 GO:0035556 GO:0038023 GO:0042221 GO:0043200 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0060089 GO:0065007 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071944 GO:0072511 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

1121

Amino Acids

126.84

Weight (kDa)

8.07

Isoelectric Point (pI)

33.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000051)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca	FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica	MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica	Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis	pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis	RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata	RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora	Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii	Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa	Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha	Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana	Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1170
AarI	CACCTGC	2 cut(s)	2047, 2404
AatII	GACGTC	1 cut(s)	2621
Acc36I	ACCTGC	2 cut(s)	2047, 2404
AccII	CGCG	2 cut(s)	2630, 3184
AciI	CCGC	4 cut(s)	850, 853, 2062, 2565
AclWI	GGATC	4 cut(s)	1060, 1321, 2094, 2455
AcoI	YGGCCR	2 cut(s)	1289, 2063
AcuI	CTGAAG	3 cut(s)	1093, 1553, 2198
AcyI	GRCGYC	1 cut(s)	2618
AdeI	CACNNNGTG	2 cut(s)	418, 3116
AfaI	GTAC	5 cut(s)	491, 1081, 1243, 1362, 3321
AfiI	CCNNNNNNNGG	4 cut(s)	138, 1205, 1337, 1692
AflIII	ACRYGT	2 cut(s)	52, 648
AhlI	ACTAGT	1 cut(s)	1238
AjnI	CCWGG	3 cut(s)	452, 1291, 1691
Alw21I	GWGCWC	4 cut(s)	648, 834, 1500, 2685
Alw26I	GTCTC	4 cut(s)	306, 451, 1045, 2931
Alw44I	GTGCAC	1 cut(s)	644
AlwI	GGATC	4 cut(s)	1060, 1321, 2094, 2455
AlwNI	CAGNNNCTG	2 cut(s)	581, 1576
Ama87I	CYCGRG	1 cut(s)	3145
AoxI	GGCC	6 cut(s)	268, 1289, 2063, 2575, 2593, 2966
ApaLI	GTGCAC	1 cut(s)	644
ApeKI	GCWGC	3 cut(s)	597, 1460, 3119
AseI	ATTAAT	3 cut(s)	972, 3272, 3294
Asp700I	GAANNNNTTC	2 cut(s)	1815, 2129
AspLEI	GCGC	2 cut(s)	2632, 3184
AspS9I	GGNCC	7 cut(s)	269, 1552, 1735, 1823, 2318, 2593, 3173
AsuC2I	CCSGG	1 cut(s)	2931
AsuHPI	GGTGA	6 cut(s)	404, 1115, 1225, 1675, 1897, 2811
AvaI	CYCGRG	1 cut(s)	3145
AvaII	GGWCC	5 cut(s)	1552, 1735, 1823, 2318, 3173
BaeGI	GKGCMC	2 cut(s)	330, 648
BalI	TGGCCA	1 cut(s)	1291
BanII	GRGCYC	2 cut(s)	834, 1500
BarI	GAAGNNNNNNTAC	2 cut(s)	489, 521
BauI	CACGAG	1 cut(s)	2793
BbsI	GAAGAC	2 cut(s)	628, 3149
Bbv12I	GWGCWC	4 cut(s)	648, 834, 1500, 2685
BbvCI	CCTCAGC	1 cut(s)	2208
BbvI	GCAGC	3 cut(s)	609, 1447, 3131
BcgI	CGANNNNNNTGC	2 cut(s)	2494, 2528
BciT130I	CCWGG	3 cut(s)	454, 1293, 1693
BcnI	CCSGG	1 cut(s)	2931
BcoDI	GTCTC	4 cut(s)	306, 451, 1045, 2931
BcuI	ACTAGT	1 cut(s)	1238
BfmI	CTRYAG	2 cut(s)	1461, 3177
BfuAI	ACCTGC	2 cut(s)	2047, 2404
BglII	AGATCT	3 cut(s)	232, 1021, 1619
BisI	GCNGC	6 cut(s)	598, 851, 1461, 2063, 2566, 3120
BlsI	GCNGC	6 cut(s)	599, 852, 1462, 2064, 2567, 3121
BmcAI	AGTACT	1 cut(s)	1081
Bme1390I	CCNGG	4 cut(s)	454, 1293, 1693, 2931
Bme18I	GGWCC	5 cut(s)	1552, 1735, 1823, 2318, 3173
BmeT110I	CYCGRG	1 cut(s)	3145
BmgT120I	GGNCC	7 cut(s)	269, 1552, 1735, 1823, 2318, 2593, 3173
BmiI	GGNNCC	3 cut(s)	1736, 1824, 2594
BmrFI	CCNGG	4 cut(s)	454, 1293, 1693, 2931
BmrI	ACTGGG	3 cut(s)	266, 1443, 3295
BmsI	GCATC	7 cut(s)	511, 529, 772, 919, 1573, 2045, 2825
BmuI	ACTGGG	3 cut(s)	266, 1443, 3295
BoxI	GACNNNNGTC	1 cut(s)	1110
BpiI	GAAGAC	2 cut(s)	628, 3149
BplI	GAGNNNNNCTC	2 cut(s)	1287, 1319
BpmI	CTGGAG	2 cut(s)	475, 2527
Bpu10I	CCTNAGC	1 cut(s)	2208
BpuMI	CCSGG	1 cut(s)	2931
Bsa29I	ATCGAT	2 cut(s)	1446, 2526
BsaAI	YACGTR	1 cut(s)	489
BsaBI	GATNNNNATC	1 cut(s)	158
BsaHI	GRCGYC	1 cut(s)	2618
BsaI	GGTCTC	2 cut(s)	306, 1045
BsaJI	CCNNGG	7 cut(s)	265, 681, 1313, 1401, 1872, 2193, 2930
BsaWI	WCCGGW	2 cut(s)	1198, 1658
Bsc4I	CCNNNNNNNGG	4 cut(s)	138, 1205, 1337, 1692
Bse1I	ACTGG	7 cut(s)	272, 767, 1438, 1527, 2837, 2920, 3301
Bse3DI	GCAATG	1 cut(s)	661
Bse8I	GATNNNNATC	1 cut(s)	158
BseBI	CCWGG	3 cut(s)	454, 1293, 1693
BseCI	ATCGAT	2 cut(s)	1446, 2526
BseDI	CCNNGG	7 cut(s)	265, 681, 1313, 1401, 1872, 2193, 2930
BseGI	GGATG	8 cut(s)	763, 771, 1004, 1266, 1325, 1525, 2341, 3016
BseJI	GATNNNNATC	1 cut(s)	158
BseLI	CCNNNNNNNGG	4 cut(s)	138, 1205, 1337, 1692
BseMI	GCAATG	1 cut(s)	661
BseMII	CTCAG	4 cut(s)	1374, 2043, 2199, 3104
BseNI	ACTGG	7 cut(s)	272, 767, 1438, 1527, 2837, 2920, 3301
BseSI	GKGCMC	2 cut(s)	330, 648
BseXI	GCAGC	3 cut(s)	609, 1447, 3131
BsgI	GTGCAG	1 cut(s)	3138
Bsh1236I	CGCG	2 cut(s)	2630, 3184
BshFI	GGCC	6 cut(s)	270, 1291, 2065, 2577, 2595, 2968
BshVI	ATCGAT	2 cut(s)	1446, 2526
BsiHKAI	GWGCWC	4 cut(s)	648, 834, 1500, 2685
BsiHKCI	CYCGRG	1 cut(s)	3145
BsiSI	CCGG	3 cut(s)	1199, 1659, 2930
BsiWI	CGTACG	1 cut(s)	489
BslFI	GGGAC	4 cut(s)	233, 533, 1748, 2117
BslI	CCNNNNNNNGG	4 cut(s)	138, 1205, 1337, 1692
BsmAI	GTCTC	4 cut(s)	306, 451, 1045, 2931
BsmBI	CGTCTC	1 cut(s)	2931
BsmFI	GGGAC	4 cut(s)	233, 533, 1748, 2117
BsmI	GAATGC	1 cut(s)	2428
BsnI	GGCC	6 cut(s)	270, 1291, 2065, 2577, 2595, 2968
Bso31I	GGTCTC	2 cut(s)	306, 1045
BsoBI	CYCGRG	1 cut(s)	3145
Bsp1286I	GDGCHC	5 cut(s)	330, 648, 834, 1500, 2685
Bsp1407I	TGTACA	1 cut(s)	3319
Bsp143I	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
Bsp19I	CCATGG	1 cut(s)	1872
BspACI	CCGC	4 cut(s)	850, 853, 2062, 2565
BspANI	GGCC	6 cut(s)	270, 1291, 2065, 2577, 2595, 2968
BspCNI	CTCAG	4 cut(s)	1375, 2044, 2200, 3105
BspDI	ATCGAT	2 cut(s)	1446, 2526
BspFNI	CGCG	2 cut(s)	2630, 3184
BspLI	GGNNCC	3 cut(s)	1736, 1824, 2594
BspMAI	CTGCAG	1 cut(s)	1465
BspMI	ACCTGC	2 cut(s)	2047, 2404
BspPI	GGATC	4 cut(s)	1060, 1321, 2094, 2455
BspTNI	GGTCTC	2 cut(s)	306, 1045
BsrDI	GCAATG	1 cut(s)	661
BsrGI	TGTACA	1 cut(s)	3319
BsrI	ACTGG	7 cut(s)	272, 767, 1438, 1527, 2837, 2920, 3301
BssECI	CCNNGG	7 cut(s)	265, 681, 1313, 1401, 1872, 2193, 2930
BssMI	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
BssNI	GRCGYC	1 cut(s)	2618
BssSI	CACGAG	1 cut(s)	2793
BssT1I	CCWWGG	5 cut(s)	265, 681, 1313, 1401, 1872
Bst2BI	CACGAG	1 cut(s)	2793
Bst2UI	CCWGG	3 cut(s)	454, 1293, 1693
Bst4CI	ACNGT	4 cut(s)	1396, 1473, 1578, 2071
Bst6I	CTCTTC	1 cut(s)	113
BstACI	GRCGYC	1 cut(s)	2618
BstAPI	GCANNNNNTGC	1 cut(s)	652
BstAUI	TGTACA	1 cut(s)	3319
BstBAI	YACGTR	1 cut(s)	489
BstC8I	GCNNGC	8 cut(s)	258, 288, 292, 423, 602, 979, 1534, 2379
BstDEI	CTNAG	7 cut(s)	669, 796, 1383, 2052, 2093, 2208, 3113
BstDSI	CCRYGG	2 cut(s)	1872, 2193
BstEII	GGTNACC	1 cut(s)	1396
BstF5I	GGATG	8 cut(s)	763, 771, 1004, 1266, 1325, 1525, 2341, 3016
BstFNI	CGCG	2 cut(s)	2630, 3184
BstHHI	GCGC	2 cut(s)	2632, 3184
BstKTI	GATC	7 cut(s)	235, 1024, 1055, 1329, 1622, 2089, 2463
BstMAI	GTCTC	4 cut(s)	306, 451, 1045, 2931
BstMBI	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
BstNI	CCWGG	3 cut(s)	454, 1293, 1693
BstNSI	RCATGY	2 cut(s)	56, 652
BstPAI	GACNNNNGTC	1 cut(s)	1110
BstPI	GGTNACC	1 cut(s)	1396
BstSCI	CCNGG	4 cut(s)	452, 1291, 1691, 2929
BstSFI	CTRYAG	2 cut(s)	1461, 3177
BstSLI	GKGCMC	2 cut(s)	330, 648
BstSNI	TACGTA	1 cut(s)	489
BstUI	CGCG	2 cut(s)	2630, 3184
BstV1I	GCAGC	3 cut(s)	609, 1447, 3131
BstV2I	GAAGAC	2 cut(s)	628, 3149
BstX2I	RGATCY	5 cut(s)	232, 1021, 1326, 1619, 2086
BstXI	CCANNNNNNTGG	1 cut(s)	1320
BstYI	RGATCY	5 cut(s)	232, 1021, 1326, 1619, 2086
Bsu15I	ATCGAT	2 cut(s)	1446, 2526
BsuRI	GGCC	6 cut(s)	270, 1291, 2065, 2577, 2595, 2968
BsuTUI	ATCGAT	2 cut(s)	1446, 2526
BtgI	CCRYGG	2 cut(s)	1872, 2193
BtsCI	GGATG	8 cut(s)	763, 771, 1004, 1266, 1325, 1525, 2341, 3016
BtsI	GCAGTG	1 cut(s)	1470
BtsIMutI	CAGTG	7 cut(s)	279, 579, 1431, 1470, 1534, 1574, 3110
BveI	ACCTGC	2 cut(s)	2047, 2404
Cac8I	GCNNGC	8 cut(s)	258, 288, 292, 423, 602, 979, 1534, 2379
CaiI	CAGNNNCTG	2 cut(s)	581, 1576
CfoI	GCGC	2 cut(s)	2632, 3184
Cfr13I	GGNCC	7 cut(s)	269, 1552, 1735, 1823, 2318, 2593, 3173
ClaI	ATCGAT	2 cut(s)	1446, 2526
Csp6I	GTAC	5 cut(s)	490, 1080, 1242, 1361, 3320
CspCI	CAANNNNNGTGG	2 cut(s)	2218, 2253
CviQI	GTAC	5 cut(s)	490, 1080, 1242, 1361, 3320
DdeI	CTNAG	7 cut(s)	669, 796, 1383, 2052, 2093, 2208, 3113
DpnI	GATC	7 cut(s)	234, 1023, 1054, 1328, 1621, 2088, 2462
DpnII	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
DraI	TTTAAA	4 cut(s)	64, 181, 1161, 1719
DraIII	CACNNNGTG	2 cut(s)	418, 3116
EaeI	YGGCCR	2 cut(s)	1289, 2063
Eam1104I	CTCTTC	1 cut(s)	113
EarI	CTCTTC	1 cut(s)	113
EciI	GGCGGA	1 cut(s)	868
Ecl136II	GAGCTC	2 cut(s)	832, 1498
Eco105I	TACGTA	1 cut(s)	489
Eco130I	CCWWGG	5 cut(s)	265, 681, 1313, 1401, 1872
Eco24I	GRGCYC	2 cut(s)	834, 1500
Eco31I	GGTCTC	2 cut(s)	306, 1045
Eco47I	GGWCC	5 cut(s)	1552, 1735, 1823, 2318, 3173
Eco53kI	GAGCTC	2 cut(s)	832, 1498
Eco57I	CTGAAG	3 cut(s)	1093, 1553, 2198
Eco88I	CYCGRG	1 cut(s)	3145
Eco91I	GGTNACC	1 cut(s)	1396
EcoICRI	GAGCTC	2 cut(s)	832, 1498
EcoO109I	RGGNCCY	4 cut(s)	1735, 1823, 2593, 3173
EcoO65I	GGTNACC	1 cut(s)	1396
EcoRI	GAATTC	3 cut(s)	1000, 1225, 2125
EcoRII	CCWGG	3 cut(s)	452, 1291, 1691
EcoT14I	CCWWGG	5 cut(s)	265, 681, 1313, 1401, 1872
EcoT22I	ATGCAT	2 cut(s)	526, 765
EcoT38I	GRGCYC	2 cut(s)	834, 1500
ErhI	CCWWGG	5 cut(s)	265, 681, 1313, 1401, 1872
Esp3I	CGTCTC	1 cut(s)	2931
FalI	AAGNNNNNCTT	4 cut(s)	249, 281, 1551, 1583
FaqI	GGGAC	4 cut(s)	233, 533, 1748, 2117
FauNDI	CATATG	1 cut(s)	2373
Fnu4HI	GCNGC	6 cut(s)	598, 851, 1461, 2063, 2566, 3120
FokI	GGATG	8 cut(s)	750, 758, 991, 1273, 1332, 1532, 2348, 3003
FriOI	GRGCYC	2 cut(s)	834, 1500
Fsp4HI	GCNGC	6 cut(s)	598, 851, 1461, 2063, 2566, 3120
GlaI	GCGC	2 cut(s)	2631, 3183
GluI	GCNGC	6 cut(s)	598, 851, 1461, 2063, 2566, 3120
GsuI	CTGGAG	2 cut(s)	475, 2527
HaeIII	GGCC	6 cut(s)	270, 1291, 2065, 2577, 2595, 2968
HapII	CCGG	3 cut(s)	1199, 1659, 2930
HhaI	GCGC	2 cut(s)	2632, 3184
Hin1I	GRCGYC	1 cut(s)	2618
Hin6I	GCGC	2 cut(s)	2630, 3182
HinP1I	GCGC	2 cut(s)	2630, 3182
HincII	GTYRAC	2 cut(s)	2616, 2774
HindII	GTYRAC	2 cut(s)	2616, 2774
HindIII	AAGCTT	5 cut(s)	292, 979, 1849, 2276, 2584
HpaII	CCGG	3 cut(s)	1199, 1659, 2930
HphI	GGTGA	6 cut(s)	404, 1115, 1225, 1675, 1897, 2811
Hpy166II	GTNNAC	6 cut(s)	646, 1244, 1633, 2616, 2774, 3320
Hpy188I	TCNGA	6 cut(s)	237, 392, 819, 1728, 2999, 3007
Hpy188III	TCNNGA	7 cut(s)	19, 230, 1975, 2694, 2703, 3191, 3198
Hpy8I	GTNNAC	6 cut(s)	646, 1244, 1633, 2616, 2774, 3320
HpyCH4III	ACNGT	4 cut(s)	1396, 1473, 1578, 2071
HpyCH4IV	ACGT	5 cut(s)	88, 488, 717, 2469, 2618
HpyF3I	CTNAG	7 cut(s)	669, 796, 1383, 2052, 2093, 2208, 3113
HpySE526I	ACGT	5 cut(s)	88, 488, 717, 2469, 2618
Hsp92I	GRCGYC	1 cut(s)	2618
HspAI	GCGC	2 cut(s)	2630, 3182
Kzo9I	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
LmnI	GCTCC	5 cut(s)	829, 837, 1695, 2226, 2680
Lsp1109I	GCAGC	3 cut(s)	609, 1447, 3131
LweI	GCATC	7 cut(s)	511, 529, 772, 919, 1573, 2045, 2825
MaeII	ACGT	5 cut(s)	88, 488, 717, 2469, 2618
MalI	GATC	7 cut(s)	234, 1023, 1054, 1328, 1621, 2088, 2462
MboI	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
MflI	RGATCY	5 cut(s)	232, 1021, 1326, 1619, 2086
MhlI	GDGCHC	5 cut(s)	330, 648, 834, 1500, 2685
MlsI	TGGCCA	1 cut(s)	1291
MluNI	TGGCCA	1 cut(s)	1291
MlyI	GAGTC	5 cut(s)	401, 642, 801, 2177, 3236
MmeI	TCCRAC	2 cut(s)	892, 946
Mox20I	TGGCCA	1 cut(s)	1291
Mph1103I	ATGCAT	2 cut(s)	526, 765
MroXI	GAANNNNTTC	2 cut(s)	1815, 2129
MscI	TGGCCA	1 cut(s)	1291
MslI	CAYNNNNRTG	3 cut(s)	558, 1673, 2868
Msp20I	TGGCCA	1 cut(s)	1291
MspI	CCGG	3 cut(s)	1199, 1659, 2930
MspR9I	CCNGG	4 cut(s)	454, 1293, 1693, 2931
Mva1269I	GAATGC	1 cut(s)	2428
MvaI	CCWGG	3 cut(s)	454, 1293, 1693
MvnI	CGCG	2 cut(s)	2630, 3184
NciI	CCSGG	1 cut(s)	2931
NcoI	CCATGG	1 cut(s)	1872
NdeI	CATATG	1 cut(s)	2373
NdeII	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
NlaIV	GGNNCC	3 cut(s)	1736, 1824, 2594
NmuCI	GTSAC	6 cut(s)	274, 727, 1103, 1429, 2071, 2470
NsiI	ATGCAT	2 cut(s)	526, 765
NspI	RCATGY	2 cut(s)	56, 652
PacI	TTAATTAA	1 cut(s)	114
PaeR7I	CTCGAG	1 cut(s)	3145
PaqCI	CACCTGC	2 cut(s)	2047, 2404
PciI	ACATGT	2 cut(s)	52, 648
PctI	GAATGC	1 cut(s)	2428
PdmI	GAANNNNTTC	2 cut(s)	1815, 2129
Pfl23II	CGTACG	1 cut(s)	489
PflFI	GACNNNGTC	1 cut(s)	2108
PkrI	GCNGC	6 cut(s)	599, 852, 1462, 2064, 2567, 3121
PleI	GAGTC	5 cut(s)	401, 641, 800, 2176, 3235
PpsI	GAGTC	5 cut(s)	401, 641, 800, 2176, 3235
Ppu21I	YACGTR	1 cut(s)	489
PpuMI	RGGWCCY	3 cut(s)	1735, 1823, 3173
PscI	ACATGT	2 cut(s)	52, 648
PshAI	GACNNNNGTC	1 cut(s)	1110
PshBI	ATTAAT	3 cut(s)	972, 3272, 3294
PsiI	TTATAA	1 cut(s)	1170
Psp124BI	GAGCTC	2 cut(s)	834, 1500
Psp5II	RGGWCCY	3 cut(s)	1735, 1823, 3173
Psp6I	CCWGG	3 cut(s)	452, 1291, 1691
PspEI	GGTNACC	1 cut(s)	1396
PspGI	CCWGG	3 cut(s)	452, 1291, 1691
PspLI	CGTACG	1 cut(s)	489
PspN4I	GGNNCC	3 cut(s)	1736, 1824, 2594
PspPI	GGNCC	7 cut(s)	269, 1552, 1735, 1823, 2318, 2593, 3173
PspPPI	RGGWCCY	3 cut(s)	1735, 1823, 3173
PspXI	VCTCGAGB	1 cut(s)	3145
PstI	CTGCAG	1 cut(s)	1465
PstNI	CAGNNNCTG	2 cut(s)	581, 1576
PsuI	RGATCY	5 cut(s)	232, 1021, 1326, 1619, 2086
PsyI	GACNNNGTC	1 cut(s)	2108
RsaI	GTAC	5 cut(s)	491, 1081, 1243, 1362, 3321
RsaNI	GTAC	5 cut(s)	490, 1080, 1242, 1361, 3320
RseI	CAYNNNNRTG	3 cut(s)	558, 1673, 2868
SacI	GAGCTC	2 cut(s)	834, 1500
SatI	GCNGC	6 cut(s)	598, 851, 1461, 2063, 2566, 3120
Sau3AI	GATC	7 cut(s)	232, 1021, 1052, 1326, 1619, 2086, 2460
Sau96I	GGNCC	7 cut(s)	269, 1552, 1735, 1823, 2318, 2593, 3173
ScaI	AGTACT	1 cut(s)	1081
SchI	GAGTC	5 cut(s)	401, 642, 801, 2177, 3236
ScrFI	CCNGG	4 cut(s)	454, 1293, 1693, 2931
SduI	GDGCHC	5 cut(s)	330, 648, 834, 1500, 2685
SfaNI	GCATC	7 cut(s)	511, 529, 772, 919, 1573, 2045, 2825
SfcI	CTRYAG	2 cut(s)	1461, 3177
Sfr274I	CTCGAG	1 cut(s)	3145
SinI	GGWCC	5 cut(s)	1552, 1735, 1823, 2318, 3173
SlaI	CTCGAG	1 cut(s)	3145
SmiI	ATTTAAAT	1 cut(s)	1161
SmiMI	CAYNNNNRTG	3 cut(s)	558, 1673, 2868
SmlI	CTYRAG	1 cut(s)	3145
SmoI	CTYRAG	1 cut(s)	3145
SnaBI	TACGTA	1 cut(s)	489
SpeI	ACTAGT	1 cut(s)	1238
SsiI	CCGC	4 cut(s)	850, 853, 2062, 2565
SspI	AATATT	2 cut(s)	2294, 3065
SstI	GAGCTC	2 cut(s)	834, 1500
StyD4I	CCNGG	4 cut(s)	452, 1291, 1691, 2929
StyI	CCWWGG	5 cut(s)	265, 681, 1313, 1401, 1872
SwaI	ATTTAAAT	1 cut(s)	1161
TaaI	ACNGT	4 cut(s)	1396, 1473, 1578, 2071
TaiI	ACGT	5 cut(s)	91, 491, 720, 2472, 2621
TaqII	GACCGA	1 cut(s)	330
TatI	WGTACW	3 cut(s)	1079, 1241, 3319
TauI	GCSGC	3 cut(s)	853, 2065, 2568
TscAI	CASTG	7 cut(s)	279, 586, 1438, 1470, 1534, 1581, 3117
TseFI	GTSAC	6 cut(s)	274, 727, 1103, 1429, 2071, 2470
TseI	GCWGC	3 cut(s)	597, 1460, 3119
Tsp45I	GTSAC	6 cut(s)	274, 727, 1103, 1429, 2071, 2470
TspGWI	ACGGA	7 cut(s)	176, 507, 750, 2090, 2210, 2348, 2352
TspRI	CASTG	7 cut(s)	279, 586, 1438, 1470, 1534, 1581, 3117
Tth111I	GACNNNGTC	1 cut(s)	2108
VneI	GTGCAC	1 cut(s)	644
VpaK11BI	GGWCC	5 cut(s)	1552, 1735, 1823, 2318, 3173
VspI	ATTAAT	3 cut(s)	972, 3272, 3294
XbaI	TCTAGA	1 cut(s)	229
XceI	RCATGY	2 cut(s)	56, 652
XhoI	CTCGAG	1 cut(s)	3145
XmnI	GAANNNNTTC	2 cut(s)	1815, 2129
ZraI	GACGTC	1 cut(s)	2619
ZrmI	AGTACT	1 cut(s)	1081
Zsp2I	ATGCAT	2 cut(s)	526, 765

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.