Rorug01G0176200

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
23998553 .. 24002145
3593 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0176200.1

Sequence Viewer

Length: 3225 bp
ATGGGTGTGAGGATTTGGTCAGTATTCATGCAACTGTTTCCCCTGATGATCATCACTTTGGCCTCTTCAAATCTGAGAGGAAATGAGGTGGAAAGACTGTCCTTGCTTGCCTTTAAATCTGAAATTGTCAGTGATCCTCTGGGCATCCTTAGCTCCTGGAATGATTCCTCCAACTTATGTGATGAGTGGCGAGGGATTACTTGCGGCCGAAGACACCCGAGAGTCACGGTTCTGGACCTCCAGTCAAGCCAGCTGACGGGTACCCTATCTTCACACATCGGAAACTTGAGCTTTCTCAGGACATTAAATCTCCAAAACAATAGCTTCCACGGCACCATCCCTCAAGAAGTTGGTCGATTGTCCCGGCTGCAGGGACTACACCTCGGGTACAACTTGTTCAGAGGTTATATCCCCATCAATATATCACATTGTTCTAATCTCCAATCTCTTGTTTTGGCTACTAACCATCTTACTGGCAAAATTCCAATAGAAATTGGCTCATTGTTGAAGCTTGAAGAACTTAATGTGCGCAGGAACAATTTATCAGGGGAAATTCCCCCTTCCCTTGGAAATCTTTCTTCTCTTGAGATTCTTTCTGTGGAAGGAAATAATCTGTATGGTGGTCTCATGAATAGCCGCCTTGGGGAATTGAAAAGCTTAAGATATCTTGCATTGGGTACAAATAGATTGACTGGTACCATCCCTCTCTCCATATACAACCTTTCTTCCATTGAACACATTTCTGTGATTGGAAACCAATTTCATGGAACTCTTCCTTCTGGGTTGGGCTGCACAATATTTCCAAACCTTCAAGCCTTTCATTTCCAAATGAACAGATTCAGCGGACCAATTCCATTTACAATCTCAAACGCATCCCACCTTTCACAGTTTTTGATCTCTAATAATAATTTTACAGGAAAAGTTCCTAGTCTGGCAAGAGTTTCCAATCTGTTTCGGTTGGAAATGGATGATAATAATCTTGGAAATGAGGATGGTGACTTGGATTTTCTCTCTTCTCTGGTTAATTGTACCAGTTTAGAACGTGTAAATGTTAGTGGGAATAATTTTCAAGGAGTGCTACCTGAATCTATTAGCAATTTCTCAACAAAGCTCAAGGTAATGAGCTTAGGAAGGAATCAGCTACGTGGAAGCATTCCCACAGGGATAGGAAATTTCATCAACTTGTTTGAATTGAGCTTCGAGGAAAACCTATTGAGGGGACCTATACCGAGTTCAATATGTAAGCCAAGTAAACTGTACAATCTGTTTATAAACCATAATCAGTTATCAGGTACTATCCCATCTTGTTTGGGAAATCTAACTTTGTTAAGCAGATTAGATCTCATGTCAAACAACTTAAAAGGAGGCATACCAAAAAGTCTTGGTCGATGCAAGTATTTGCAATCTTTGGTTCTTTCTCAAAATAAACTTAACGGTTCTATTCCGCAAGAAGTCATCGGTTCATCAGCTTTATCACAAGTTTTGGATTTGGATTTATCCAATAACCAATTTACTGGTAACATTCCCATTGAAGTAGGTTATTTTTTTAATCTTGCTTCTTTGAATCTTTCTGGAAATAGGTTATCTGGTGAGATTCCAGCAGAAAGCTTAAGGGGATGGGGACAATTGGAAAGTTTGGACCTCTCTCGTAACAACTTTTCAGGAACAATTCCTGTTTATTTGCAGATTTTCAAGTTGCAGAATTTAGACCTCTCATTTAATGATTTTGAAGGTGAAGTACCAAATGAAGGAGTATTCAGGAATACAAGTGTGGTTTCTCTCGTGGGAAACAGACGACTTTGTGGAGGTGTACCTCAGTTGAACTTGCCTAAATGTATCTCCAATCGATCTAACTCAAATTCCAATCGATCCAATTCAAATAAGCCAAAATCATTTTCCAAGTTGAAACCAATTATCTCATTCATTTGTGGGGTAATTGGAGTTTTCTTAGTGGCGGCCGTGTGCTTTGTGCTCCTCTATAGATCAAGAAAAGCAAGAGTTGAGCCAAGAAAAGCAAGAGTTGAGTCAAGAAAAGCAAGAGTTGAGCTAACAAAAGCAAGAGTTGAGCCAAGAAAAGCAAGAGTTGAGCCAATAAAAGCAAGAGTTGAGCTAACAAAAGCAAGAGTACTTGAGCCAAGAAAAGCAAGAGTTCAGTCAACTTCAGAACTATCATTGGATATTTCATTCTTAAAGTTGTCATATGGAGATCTACTTCAAGCAACTGATGGGTTCTCTTCTTGGAATTTGATTGGTGCTGGTAGTTCTGGTTCTGTGTACTGGGGAGTTCTCAATCAGCCAAAAGAAAGAATTGTTGCTGTCAAAGTACTCAATCTTCAAAAGGCAACTACTTCTAATAGTTTCATAGCTGAATGTCAATTCTTGAAAAACATTAGGCACCGAAATCTTGTCAAACTAGTGACTGCTTGCTCAAGTACTGATTTTCAAGGAAATGAGTTCAAAGCTTTGGTTTTTGAGTACATGATGCATGGAAATCTAGATGAGTGGCTGCATGATTCAGCTGACAGAGTAGTTGAGCTACCCATTGTGGAGGTGCATTTGAATCTTATCCAAAGGGTCAATATTGCCATTGACATAGCTAGTGCTTTGGATTATTTGCACAATTATTTTCACATCCCAATAGTTCATTGTGATTTAAAGCCCAGTAACGTTCTCTTAGAAAAAGACATGACTGCCTGTGTTTGTGACTTTGGTTTGGCAAGTTACCTCCCAAACACTTCTTGTCCGGTTTCTTCACTAGAACGCTCTTCCAATTCGATAATGGGTTCCATTGGCTATATTGCCCCAGAGTACGGCATGGGAGATGAGGTGTCAACCTACGGAGACGTGTATAGCTATGGAATCCTATTACTGGAGATGCTTACTGGTAAGAGGCCAACAGATGATATGTTTGCAGATGACATGAACTTGCACAATTTTGTGCTGATGGCTTTGCCTGAACGTGTGAAAGAAATATGTGATCCGGTGCTTCTTCAAGGACAAGAAAGCAGCACTAGTTCAAATCCCACAAGCACTAGGAATAATGTCCAAAATGAAACATACAGAGTTGAAGAGTGCCTTATTTCCATTGCTAGGATAGGAGTTGCTTGTTCGGCGCAATTGTCCAAAGAGCGAATGGAGATTGGGAAAGTTTTAGCAGAACTACGTGTAATCATGGATGTGCTGACTGGAACCAGGATGCCTAGAGAGAACATGATCACTGCCTAA

Protein Analysis

1074

Amino Acids

118.66

Weight (kDa)

8.58

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 68 2.2e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 76 - 201 4.4e-11 Leucine-rich repeat region
LRR_14 PF23598 186 - 357 2.2e-06 Leucine-rich repeat region
LRR_8 PF13855 517 - 576 1.9e-06 Leucine rich repeat
Pkinase PF00069 748 - 971 2.9e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 749 - 974 1.3e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1271
Acc16I TGCGCA 1 cut(s) 530
Acc65I GGTACC 2 cut(s) 260, 695
AccB1I GGYRCC 4 cut(s) 260, 332, 695, 2394
AciI CCGC 5 cut(s) 204, 637, 843, 1445, 1955
AclI AACGTT 1 cut(s) 2667
AclWI GGATC 3 cut(s) 128, 1863, 2972
AcoI YGGCCR 2 cut(s) 205, 1956
AcsI RAATTY 6 cut(s) 480, 552, 1171, 1702, 1858, 2242
AcuI CTGAAG 1 cut(s) 2145
AfiI CCNNNNNNNGG 9 cut(s) 256, 370, 566, 643, 1216, 1748, 2810, 2869, 3090
AflII CTTAAG 2 cut(s) 658, 1609
AflIII ACRYGT 4 cut(s) 1042, 2844, 2959, 3163
AhdI GACNNNNNGTC 1 cut(s) 241
AhlI ACTAGT 2 cut(s) 2413, 3011
AjiI CACGTC 1 cut(s) 2845
AjnI CCWGG 2 cut(s) 155, 3191
AjuI GAANNNNNNNTTGG 2 cut(s) 1879, 1911
Alw21I GWGCWC 1 cut(s) 1974
Alw26I GTCTC 2 cut(s) 629, 2835
AlwI GGATC 3 cut(s) 128, 1863, 2972
Ama87I CYCGRG 2 cut(s) 217, 383
AoxI GGCC 4 cut(s) 60, 205, 1956, 2891
ApeKI GCWGC 4 cut(s) 367, 789, 2506, 3006
ApoI RAATTY 6 cut(s) 480, 552, 1171, 1702, 1858, 2242
Asp700I GAANNNNTTC 2 cut(s) 574, 836
Asp718I GGTACC 2 cut(s) 260, 695
AspLEI GCGC 2 cut(s) 531, 3115
AspS9I GGNCC 4 cut(s) 235, 845, 1220, 1639
AsuC2I CCSGG 1 cut(s) 364
AsuHPI GGTGA 3 cut(s) 1007, 1601, 1745
AvaI CYCGRG 2 cut(s) 217, 383
AvaII GGWCC 4 cut(s) 235, 845, 1220, 1639
BanI GGYRCC 4 cut(s) 260, 332, 695, 2394
BarI GAAGNNNNNNTAC 6 cut(s) 253, 285, 1722, 1754, 2316, 2348
BauI CACGAG 1 cut(s) 1781
BbsI GAAGAC 1 cut(s) 217
Bbv12I GWGCWC 1 cut(s) 1974
BbvI GCAGC 4 cut(s) 354, 776, 2493, 3018
BccI CCATC 9 cut(s) 344, 422, 474, 707, 986, 1309, 1611, 2219, 2938
BceAI ACGGC 3 cut(s) 346, 1943, 2827
BciT130I CCWGG 2 cut(s) 157, 3193
BclI TGATCA 2 cut(s) 48, 3213
BcnI CCSGG 1 cut(s) 364
BcoDI GTCTC 2 cut(s) 629, 2835
BcuI ACTAGT 2 cut(s) 2413, 3011
BfaI CTAG 9 cut(s) 927, 2414, 2495, 2598, 2756, 3012, 3033, 3090, 3201
BfmI CTRYAG 2 cut(s) 368, 1978
BfrI CTTAAG 2 cut(s) 658, 1609
BglII AGATCT 2 cut(s) 1339, 2206
BisI GCNGC 7 cut(s) 205, 368, 637, 790, 1956, 2507, 3007
BlsI GCNGC 7 cut(s) 206, 369, 638, 791, 1957, 2508, 3008
BmcAI AGTACT 3 cut(s) 2127, 2325, 2434
Bme1390I CCNGG 3 cut(s) 157, 364, 3193
Bme18I GGWCC 4 cut(s) 235, 845, 1220, 1639
BmeRI GACNNNNNGTC 1 cut(s) 241
BmeT110I CYCGRG 2 cut(s) 217, 383
BmgBI CACGTC 1 cut(s) 2845
BmgT120I GGNCC 4 cut(s) 235, 845, 1220, 1639
BmiI GGNNCC 7 cut(s) 262, 334, 697, 1221, 2396, 2785, 3190
BmrFI CCNGG 3 cut(s) 157, 364, 3193
BmrI ACTGGG 2 cut(s) 2287, 2655
BmsI GCATC 6 cut(s) 153, 881, 1379, 2472, 2865, 3186
BmuI ACTGGG 2 cut(s) 2287, 2655
BpiI GAAGAC 1 cut(s) 217
BpmI CTGGAG 2 cut(s) 224, 2891
Bpu10I CCTNAGC 2 cut(s) 149, 1126
BpuEI CTTGAG 6 cut(s) 307, 327, 605, 1097, 2150, 2413
BpuMI CCSGG 1 cut(s) 364
Bsa29I ATCGAT 2 cut(s) 1846, 1867
BsaAI YACGTR 2 cut(s) 1145, 3164
BsaBI GATNNNNATC 2 cut(s) 50, 975
BsaI GGTCTC 1 cut(s) 629
BsaJI CCNNGG 4 cut(s) 328, 382, 565, 640
BsaWI WCCGGW 2 cut(s) 2743, 2980
BsaXI ACNNNNNCTCC 2 cut(s) 2811, 2841
Bsc4I CCNNNNNNNGG 9 cut(s) 256, 370, 566, 643, 1216, 1748, 2810, 2869, 3090
Bse3DI GCAATG 1 cut(s) 3084
Bse8I GATNNNNATC 2 cut(s) 50, 975
BseBI CCWGG 2 cut(s) 157, 3193
BseCI ATCGAT 2 cut(s) 1846, 1867
BseDI CCNNGG 4 cut(s) 328, 382, 565, 640
BseJI GATNNNNATC 2 cut(s) 50, 975
BseLI CCNNNNNNNGG 9 cut(s) 256, 370, 566, 643, 1216, 1748, 2810, 2869, 3090
BseMI GCAATG 1 cut(s) 3084
BseMII CTCAG 3 cut(s) 65, 310, 1829
BseRI GAGGAG 1 cut(s) 1964
BseX3I CGGCCG 2 cut(s) 205, 1956
BseXI GCAGC 4 cut(s) 354, 776, 2493, 3018
BsgI GTGCAG 1 cut(s) 775
Bsh1285I CGRYCG 2 cut(s) 208, 1959
BshFI GGCC 4 cut(s) 62, 207, 1958, 2893
BshNI GGYRCC 4 cut(s) 260, 332, 695, 2394
BshVI ATCGAT 2 cut(s) 1846, 1867
BsiEI CGRYCG 2 cut(s) 208, 1959
BsiHKAI GWGCWC 1 cut(s) 1974
BsiHKCI CYCGRG 2 cut(s) 217, 383
BsiSI CCGG 3 cut(s) 364, 2744, 2981
BslFI GGGAC 4 cut(s) 346, 387, 1233, 1635
BslI CCNNNNNNNGG 9 cut(s) 256, 370, 566, 643, 1216, 1748, 2810, 2869, 3090
BsmAI GTCTC 2 cut(s) 629, 2835
BsmBI CGTCTC 1 cut(s) 2835
BsmFI GGGAC 4 cut(s) 346, 387, 1233, 1635
BsmI GAATGC 1 cut(s) 1152
BsnI GGCC 4 cut(s) 62, 207, 1958, 2893
Bso31I GGTCTC 1 cut(s) 629
BsoBI CYCGRG 2 cut(s) 217, 383
Bsp1286I GDGCHC 1 cut(s) 1974
Bsp1407I TGTACA 1 cut(s) 1257
BspACI CCGC 5 cut(s) 204, 637, 843, 1445, 1955
BspANI GGCC 4 cut(s) 62, 207, 1958, 2893
BspCNI CTCAG 3 cut(s) 66, 309, 1828
BspDI ATCGAT 2 cut(s) 1846, 1867
BspHI TCATGA 1 cut(s) 627
BspLI GGNNCC 7 cut(s) 262, 334, 697, 1221, 2396, 2785, 3190
BspMAI CTGCAG 1 cut(s) 372
BspPI GGATC 3 cut(s) 128, 1863, 2972
BspQI GCTCTTC 1 cut(s) 2770
BspT107I GGYRCC 4 cut(s) 260, 332, 695, 2394
BspTI CTTAAG 2 cut(s) 658, 1609
BspTNI GGTCTC 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 3084
BsrGI TGTACA 1 cut(s) 1257
BssECI CCNNGG 4 cut(s) 328, 382, 565, 640
BssSI CACGAG 1 cut(s) 1781
BssT1I CCWWGG 2 cut(s) 565, 640
Bst2BI CACGAG 1 cut(s) 1781
Bst2UI CCWGG 2 cut(s) 157, 3193
Bst4CI ACNGT 6 cut(s) 36, 99, 229, 888, 1257, 1436
Bst6I CTCTTC 6 cut(s) 70, 777, 1018, 2239, 2770, 3063
BstAFI CTTAAG 2 cut(s) 658, 1609
BstAUI TGTACA 1 cut(s) 1257
BstBAI YACGTR 2 cut(s) 1145, 3164
BstC8I GCNNGC 3 cut(s) 108, 251, 2425
BstDEI CTNAG 7 cut(s) 74, 149, 296, 1126, 1815, 1948, 2674
BstDSI CCRYGG 1 cut(s) 328
BstHHI GCGC 2 cut(s) 531, 3115
BstMAI GTCTC 2 cut(s) 629, 2835
BstMCI CGRYCG 2 cut(s) 208, 1959
BstMWI GCNNNNNNNGC 3 cut(s) 150, 330, 3110
BstNI CCWGG 2 cut(s) 157, 3193
BstSCI CCNGG 3 cut(s) 155, 362, 3191
BstSFI CTRYAG 2 cut(s) 368, 1978
BstV1I GCAGC 4 cut(s) 354, 776, 2493, 3018
BstV2I GAAGAC 1 cut(s) 217
BstX2I RGATCY 2 cut(s) 1339, 2206
BstXI CCANNNNNNTGG 3 cut(s) 473, 764, 1514
BstYI RGATCY 2 cut(s) 1339, 2206
BstZI CGGCCG 2 cut(s) 205, 1956
Bsu15I ATCGAT 2 cut(s) 1846, 1867
BsuRI GGCC 4 cut(s) 62, 207, 1958, 2893
BsuTUI ATCGAT 2 cut(s) 1846, 1867
BtgI CCRYGG 1 cut(s) 328
BtrI CACGTC 1 cut(s) 2845
BtsI GCAGTG 1 cut(s) 3216
BtsIMutI CAGTG 2 cut(s) 136, 3216
Cac8I GCNNGC 3 cut(s) 108, 251, 2425
CciI TCATGA 1 cut(s) 627
CfoI GCGC 2 cut(s) 531, 3115
Cfr13I GGNCC 4 cut(s) 235, 845, 1220, 1639
ClaI ATCGAT 2 cut(s) 1846, 1867
DdeI CTNAG 7 cut(s) 74, 149, 296, 1126, 1815, 1948, 2674
DraI TTTAAA 2 cut(s) 115, 2655
DriI GACNNNNNGTC 1 cut(s) 241
EaeI YGGCCR 2 cut(s) 205, 1956
EagI CGGCCG 2 cut(s) 205, 1956
Eam1104I CTCTTC 6 cut(s) 70, 777, 1018, 2239, 2770, 3063
Eam1105I GACNNNNNGTC 1 cut(s) 241
EarI CTCTTC 6 cut(s) 70, 777, 1018, 2239, 2770, 3063
EclXI CGGCCG 2 cut(s) 205, 1956
Eco130I CCWWGG 2 cut(s) 565, 640
Eco31I GGTCTC 1 cut(s) 629
Eco32I GATATC 1 cut(s) 665
Eco47I GGWCC 4 cut(s) 235, 845, 1220, 1639
Eco52I CGGCCG 2 cut(s) 205, 1956
Eco57I CTGAAG 1 cut(s) 2145
Eco88I CYCGRG 2 cut(s) 217, 383
EcoO109I RGGNCCY 1 cut(s) 1220
EcoRII CCWGG 2 cut(s) 155, 3191
EcoRV GATATC 1 cut(s) 665
EcoT14I CCWWGG 2 cut(s) 565, 640
EcoT22I ATGCAT 1 cut(s) 2487
ErhI CCWWGG 2 cut(s) 565, 640
Esp3I CGTCTC 1 cut(s) 2835
FalI AAGNNNNNCTT 2 cut(s) 3060, 3092
FaqI GGGAC 4 cut(s) 346, 387, 1233, 1635
FauNDI CATATG 1 cut(s) 2200
FbaI TGATCA 2 cut(s) 48, 3213
Fnu4HI GCNGC 7 cut(s) 205, 368, 637, 790, 1956, 2507, 3007
Fsp4HI GCNGC 7 cut(s) 205, 368, 637, 790, 1956, 2507, 3007
FspBI CTAG 9 cut(s) 927, 2414, 2495, 2598, 2756, 3012, 3033, 3090, 3201
FspI TGCGCA 1 cut(s) 530
GlaI GCGC 2 cut(s) 530, 3114
GluI GCNGC 7 cut(s) 205, 368, 637, 790, 1956, 2507, 3007
GsuI CTGGAG 2 cut(s) 224, 2891
HaeIII GGCC 4 cut(s) 62, 207, 1958, 2893
HapII CCGG 3 cut(s) 364, 2744, 2981
HhaI GCGC 2 cut(s) 531, 3115
Hin6I GCGC 2 cut(s) 529, 3113
HinP1I GCGC 2 cut(s) 529, 3113
HincII GTYRAC 2 cut(s) 2157, 2832
HindII GTYRAC 2 cut(s) 2157, 2832
HindIII AAGCTT 4 cut(s) 509, 655, 1606, 2460
HpaII CCGG 3 cut(s) 364, 2744, 2981
HphI GGTGA 3 cut(s) 1007, 1601, 1745
Hpy166II GTNNAC 5 cut(s) 1253, 1811, 2157, 2275, 2832
Hpy188I TCNGA 5 cut(s) 75, 121, 281, 401, 2164
Hpy8I GTNNAC 5 cut(s) 1253, 1811, 2157, 2275, 2832
HpyAV CCTTC 7 cut(s) 570, 596, 786, 818, 1125, 1724, 1742
HpyCH4III ACNGT 6 cut(s) 36, 99, 229, 888, 1257, 1436
HpyCH4IV ACGT 6 cut(s) 1042, 1144, 2667, 2844, 2959, 3163
HpyF10VI GCNNNNNNNGC 3 cut(s) 150, 330, 3110
HpyF3I CTNAG 7 cut(s) 74, 149, 296, 1126, 1815, 1948, 2674
HpySE526I ACGT 6 cut(s) 1042, 1144, 2667, 2844, 2959, 3163
HspAI GCGC 2 cut(s) 529, 3113
KpnI GGTACC 2 cut(s) 264, 699
Ksp22I TGATCA 2 cut(s) 48, 3213
LguI GCTCTTC 1 cut(s) 2770
LmnI GCTCC 2 cut(s) 158, 1977
Lsp1109I GCAGC 4 cut(s) 354, 776, 2493, 3018
LweI GCATC 6 cut(s) 153, 881, 1379, 2472, 2865, 3186
MaeI CTAG 9 cut(s) 927, 2414, 2495, 2598, 2756, 3012, 3033, 3090, 3201
MaeII ACGT 6 cut(s) 1042, 1144, 2667, 2844, 2959, 3163
MaeIII GTNAC 8 cut(s) 223, 995, 1517, 1649, 2416, 2663, 2702, 2720
MfeI CAATTG 2 cut(s) 1625, 3116
MflI RGATCY 2 cut(s) 1339, 2206
MhlI GDGCHC 1 cut(s) 1974
MlyI GAGTC 2 cut(s) 231, 2033
MmeI TCCRAC 2 cut(s) 195, 939
Mph1103I ATGCAT 1 cut(s) 2487
MroXI GAANNNNTTC 2 cut(s) 574, 836
MslI CAYNNNNRTG 2 cut(s) 743, 3176
MspA1I CMGCKG 3 cut(s) 253, 843, 2519
MspCI CTTAAG 2 cut(s) 658, 1609
MspI CCGG 3 cut(s) 364, 2744, 2981
MspR9I CCNGG 3 cut(s) 157, 364, 3193
MunI CAATTG 2 cut(s) 1625, 3116
Mva1269I GAATGC 1 cut(s) 1152
MvaI CCWGG 2 cut(s) 157, 3193
MwoI GCNNNNNNNGC 3 cut(s) 150, 330, 3110
NciI CCSGG 1 cut(s) 364
NdeI CATATG 1 cut(s) 2200
NlaIV GGNNCC 7 cut(s) 262, 334, 697, 1221, 2396, 2785, 3190
NmuCI GTSAC 4 cut(s) 223, 995, 2416, 2702
NsbI TGCGCA 1 cut(s) 530
NsiI ATGCAT 1 cut(s) 2487
PagI TCATGA 1 cut(s) 627
PciSI GCTCTTC 1 cut(s) 2770
PctI GAATGC 1 cut(s) 1152
PdmI GAANNNNTTC 2 cut(s) 574, 836
PfoI TCCNGGA 1 cut(s) 155
PkrI GCNGC 7 cut(s) 206, 369, 638, 791, 1957, 2508, 3008
PleI GAGTC 2 cut(s) 230, 2032
PpsI GAGTC 2 cut(s) 230, 2032
Ppu21I YACGTR 2 cut(s) 1145, 3164
PpuMI RGGWCCY 1 cut(s) 1220
PsiI TTATAA 1 cut(s) 1271
Psp1406I AACGTT 1 cut(s) 2667
Psp5II RGGWCCY 1 cut(s) 1220
Psp6I CCWGG 2 cut(s) 155, 3191
PspGI CCWGG 2 cut(s) 155, 3191
PspN4I GGNNCC 7 cut(s) 262, 334, 697, 1221, 2396, 2785, 3190
PspPI GGNCC 4 cut(s) 235, 845, 1220, 1639
PspPPI RGGWCCY 1 cut(s) 1220
PsrI GAACNNNNNNTAC 4 cut(s) 380, 412, 2251, 2283
PstI CTGCAG 1 cut(s) 372
PsuI RGATCY 2 cut(s) 1339, 2206
PvuII CAGCTG 2 cut(s) 253, 2519
RseI CAYNNNNRTG 2 cut(s) 743, 3176
SapI GCTCTTC 1 cut(s) 2770
SatI GCNGC 7 cut(s) 205, 368, 637, 790, 1956, 2507, 3007
Sau96I GGNCC 4 cut(s) 235, 845, 1220, 1639
ScaI AGTACT 3 cut(s) 2127, 2325, 2434
SchI GAGTC 2 cut(s) 231, 2033
ScrFI CCNGG 3 cut(s) 157, 364, 3193
SduI GDGCHC 1 cut(s) 1974
SfaNI GCATC 6 cut(s) 153, 881, 1379, 2472, 2865, 3186
SfcI CTRYAG 2 cut(s) 368, 1978
SinI GGWCC 4 cut(s) 235, 845, 1220, 1639
SmiMI CAYNNNNRTG 2 cut(s) 743, 3176
SmlI CTYRAG 8 cut(s) 286, 342, 584, 658, 1112, 1609, 2129, 2428
SmoI CTYRAG 8 cut(s) 286, 342, 584, 658, 1112, 1609, 2129, 2428
SpeI ACTAGT 2 cut(s) 2413, 3011
SsiI CCGC 5 cut(s) 204, 637, 843, 1445, 1955
SspI AATATT 2 cut(s) 798, 2581
SspMI CTAG 9 cut(s) 927, 2414, 2495, 2598, 2756, 3012, 3033, 3090, 3201
StyD4I CCNGG 3 cut(s) 155, 362, 3191
StyI CCWWGG 2 cut(s) 565, 640
TaaI ACNGT 6 cut(s) 36, 99, 229, 888, 1257, 1436
TaiI ACGT 6 cut(s) 1045, 1147, 2670, 2847, 2962, 3166
TaqI TCGA 6 cut(s) 355, 1200, 1387, 1846, 1867, 2774
TatI WGTACW 6 cut(s) 1257, 2125, 2274, 2323, 2432, 2475
TauI GCSGC 3 cut(s) 207, 639, 1958
TscAI CASTG 2 cut(s) 136, 3223
TseFI GTSAC 4 cut(s) 223, 995, 2416, 2702
TseI GCWGC 4 cut(s) 367, 789, 2506, 3006
Tsp45I GTSAC 4 cut(s) 223, 995, 2416, 2702
TspGWI ACGGA 1 cut(s) 2853
TspRI CASTG 2 cut(s) 136, 3223
Vha464I CTTAAG 2 cut(s) 658, 1609
VpaK11BI GGWCC 4 cut(s) 235, 845, 1220, 1639
XapI RAATTY 6 cut(s) 480, 552, 1171, 1702, 1858, 2242
XbaI TCTAGA 1 cut(s) 2494
XcmI CCANNNNNNNNNTGG 2 cut(s) 2776, 3130
XmnI GAANNNNTTC 2 cut(s) 574, 836
XspI CTAG 9 cut(s) 927, 2414, 2495, 2598, 2756, 3012, 3033, 3090, 3201
ZrmI AGTACT 3 cut(s) 2127, 2325, 2434
Zsp2I ATGCAT 1 cut(s) 2487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.