Rw6G038680

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Forward (+)
62761481 .. 62767231
5751 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G038680.1

Sequence Viewer

Length: 2721 bp
ATGTTTAGAAGACTAGAAAAAAAAAAGTTTTTTTTTTTTTTTTGTTTTCCTCTATTTACGCGCCCTCTAGATCTGATAAAGAATGAACGAGTGAAAGCCATCATCGGGCCAGTGACATCCATGCAGACGAGCTTTGTCATTAATCTTGGAAACCAGTCTCATGTACCTATTATATCATTTTCTGCTACAAGCCCTTCTCTTACTTCTCTCCGGATCCCCTATTTCTTTCAATTTGCACAAACTGACTCATCCCAAGTGGAAGCCATTAGTGCAATTGTTAAAGCCTTTGGATGGAGACAAGTCGTGCCCATCTACATAAACACCGAGTATGGACAGGGAATCATACCATACCTAACTGATGCCTTGCAAGAGGTAGATGCTCGTGTCCCATACCGGAGTGTTATTTCCTCATCAGCCACCGACGGTCAAATAGTTCAAGAACTTTCCAAGTTGATGTCGATGGAAACCAGAGTTTTCATTGTTCACATGACAGCTGATCTATCCTCTAGACTATTTGTCAAGGCAAAAGAGGTTGGGATGATGAGTGAAGGGTATGTGTGGCTCACTACTAATGAGATACTTAACAGATTACAGTCTCAAAATTATACAGTCATCAATTCCATGCAAGGTGTGTTAGGTATACAAACTTTTGTTCCACTAACACCAGAGCTTGAAGATCTCAAGATAGGGTTGAAACGGCAATTCCATACAGAAAATCCAGCCATTGGTGCTGAATTGGATGTTTTTGGACTTTGGGCTTATGATGCTGTTTTTGCAGTGGCCATGGCAATTGAACAAGCAATTGGAACTCCAACTGGCTTTCCCTTCCAAGGGTCAATTGTTACTTCCAACCACTCGACAGATCTTGAAGGTTTTCCGGTCTCTCCATATGGTCCAGAACTTTGCAGAGCTCTGGCAACTGCTAGATTTCAAGGCATAGCTGGGAATTTCAGTGTTGTTGGTAGGCAACGTGAATCATCAAATTTTCGTGTAGTCAATGTTAATGGTGGTGAGGCAACAACAATTGGATTTTGGACACTGAAAGAGGGCCTAGTCAAAACATTGAAGTCGTCAGCAAACTCAAGTAAACCTTCAAGTTCCAAATTTAAGTTTGGACCTATTAGGTGGCCAGGAAATTCTCCCTCTGTTCCCAAGGGTTGGGAGTTCCCAACAAATGGCAAGAAATTGAGAATTGGAGTTCCTGTTAAGCAAGATTTTACCGAGTATGTTAAGGTAACCATAAACCACAGCACTAACACAACGGATGTCACAGGCTTCAGTGTCGATGTCTTTAAGGCTGCAGTGGTACTATTACCATATGCTCTTCCTTATGAGTTCATTCCCTTTGCATACTCCAATGGCACCAGCGCCGGCACTTACAATCAGTTGTGCCATCAAGTATATCTTAAGAAATTTGATGCTGTGGTGGGAGATACAACTATTAGAGCAGACAGGTCATTATATGTGGACTTTACAATGCCATACTCAGAATCTGGTGTATCAATGGTTGTGCCAGTCATCGACTTCAAGAGCAAACAGGCATTGGCTTTCTTGAAGCCTTGGACATGGGACCTGTGGCTAACAACTTGTTTTTTCTTTGTCTATATTGGTTTTGTGATTTGGGTTCTTGAACATCGAATTAATAAGGAATTTCGCGGCCCTCTCTCACATCAAGTTGGCACCAGTATTTGGTTCTCCTGCTCAACCATGGTGTTTGCACATAGGGAGAGAGTTCTTAGCAACTTGGCTAGATTCGTTATGATCATCTGGGTATTTGTTGTGCTTATATTAACAATAAATTACACAGCCAGTTTATCATCACTGTATACATTTGAACAACTCCAGCCAACAGTTGATATAGACGATCTACTTAGGAATCATGATAACGTTGGCTACATCAAGAACTCTTATGTTTACGATCTCTTGAAACAAGTTGGTTTTGATGATTCTAAGCTGAAGGAATATGAAACAATGGAAGAAATTGATGAAGCTCTTTCAAAAGGGACTGCAAAAGATGGTATTGCTGCTGTTGTTCATGGAACCCCCAAGATGAAGCTTTTTCTTGCCAAATATTGTTCTAAATATACCATGATTGAACCCATATTTAAAACTGATGGATTTGCCTTTGTGTTTCCAAAACGTTCCCCACTTGTAGACGATGTTTCACAGGCAATCCTAAACATGACCGGAGGAGACAAGATAATGACACTTGAAAAAGAATGGTTAAAGAACGAATCCAGTTGCTCAGACTCGAGCGGCGCAAATGTTTCTAGCAACAGTCTTGGCCTTGGTAGCTTTTGGGTCCTATTCCTCGTCGCCGGGTTGGCTTCAATACTCGCCCTAATCATATTTGTAGCTTTTTTCATTCATAGGCATAGGGACAAGTTGGTGCAACCAGCTGATTCAGAACCCTCGACATGGAGAAAGATCCAAGCTCTCGTCAAAATTTTCAATGAAAAAGACCTTGACTCTCACACTTTCAGGAGGAGTGGGAAAGTGCGAGATGCAGTAATGAACTCACCAAACAACTTCCCAGGAACTGTAGTTCACCACAATTCGGATCACACTGATCAAACAAACTCTTCATTTGTTGGAGAGCAGCAAACAACCTCAATTTTCGAAGCACCTTCAGACGTACTACTTCCTTCAACTACTGAGGTTGACATCACAGTTCAAGAAATGCATAGAACTACTTCTAACACTGCTCAAGAATACAATTGA

Protein Analysis

906

Amino Acids

101.46

Weight (kDa)

6.83

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 23 - 336 6.5e-68 Receptor family ligand binding region
Peripla_BP_6 PF13458 24 - 273 7.8e-13 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 413 - 504 5.1e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 420 - 743 1.1e-06 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 522 - 776 9.5e-34 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1361, 1679
AccB7I CCANNNNNTGG 4 cut(s) 725, 1158, 1175, 1689
AccBSI CCGCTC 1 cut(s) 2256
AccI GTMKAC 3 cut(s) 640, 1826, 2154
AccII CGCG 2 cut(s) 61, 1656
AccIII TCCGGA 1 cut(s) 210
AciI CCGC 2 cut(s) 1656, 2256
AclI AACGTT 2 cut(s) 1887, 2140
AclWI GGATC 4 cut(s) 208, 221, 2422, 2568
AcoI YGGCCR 2 cut(s) 780, 1127
AcsI RAATTY 7 cut(s) 946, 982, 1103, 1135, 1412, 1649, 2445
AcuI CTGAAG 3 cut(s) 1261, 1976, 2613
AfaI GTAC 3 cut(s) 165, 1308, 2637
AflII CTTAAG 1 cut(s) 1406
AhdI GACNNNNNGTC 1 cut(s) 515
AjnI CCWGG 2 cut(s) 1129, 2533
AjuI GAANNNNNNNTTGG 2 cut(s) 786, 818
AloI GAACNNNNNNTCC 2 cut(s) 2529, 2561
Alw21I GWGCWC 1 cut(s) 913
Alw26I GTCTC 5 cut(s) 162, 289, 600, 886, 2187
AlwI GGATC 4 cut(s) 208, 221, 2422, 2568
AlwNI CAGNNNCTG 2 cut(s) 1493, 2540
Ama87I CYCGRG 1 cut(s) 2251
Aor13HI TCCGGA 1 cut(s) 210
AoxI GGCC 6 cut(s) 107, 780, 1048, 1127, 1657, 2284
ApeKI GCWGC 3 cut(s) 1298, 2024, 2599
ApoI RAATTY 7 cut(s) 946, 982, 1103, 1135, 1412, 1649, 2445
AseI ATTAAT 2 cut(s) 141, 1641
Asp700I GAANNNNTTC 2 cut(s) 873, 2692
AspLEI GCGC 3 cut(s) 63, 1370, 2261
AspS9I GGNCC 7 cut(s) 107, 893, 1048, 1115, 1570, 1658, 2302
AsuC2I CCSGG 1 cut(s) 2320
AsuHPI GGTGA 3 cut(s) 1022, 2511, 2540
AsuII TTCGAA 1 cut(s) 2619
AvaI CYCGRG 1 cut(s) 2251
AvaII GGWCC 4 cut(s) 893, 1115, 1570, 2302
BaeGI GKGCMC 1 cut(s) 309
BalI TGGCCA 2 cut(s) 782, 1129
BamHI GGATCC 1 cut(s) 213
BanI GGYRCC 2 cut(s) 1361, 1679
BanII GRGCYC 1 cut(s) 913
BauI CACGAG 1 cut(s) 381
BbsI GAAGAC 1 cut(s) 16
Bbv12I GWGCWC 1 cut(s) 913
BbvI GCAGC 3 cut(s) 1285, 2011, 2611
BccI CCATC 7 cut(s) 107, 285, 317, 454, 1401, 2009, 2108
BceAI ACGGC 1 cut(s) 713
BciT130I CCWGG 2 cut(s) 1131, 2535
BclI TGATCA 2 cut(s) 1761, 2569
BcnI CCSGG 1 cut(s) 2320
BcoDI GTCTC 5 cut(s) 162, 289, 600, 886, 2187
BfaI CTAG 7 cut(s) 14, 68, 507, 924, 1052, 1749, 2271
BfmI CTRYAG 2 cut(s) 1299, 2541
BfoI RGCGCY 1 cut(s) 1371
BfrI CTTAAG 1 cut(s) 1406
BglI GCCNNNNNGGC 1 cut(s) 2324
BglII AGATCT 3 cut(s) 70, 676, 862
BisI GCNGC 5 cut(s) 1299, 1657, 2025, 2257, 2600
BlsI GCNGC 5 cut(s) 1300, 1658, 2026, 2258, 2601
Bme1390I CCNGG 3 cut(s) 1131, 2320, 2535
Bme18I GGWCC 4 cut(s) 893, 1115, 1570, 2302
BmeRI GACNNNNNGTC 1 cut(s) 515
BmeT110I CYCGRG 1 cut(s) 2251
BmgT120I GGNCC 7 cut(s) 107, 893, 1048, 1115, 1570, 1658, 2302
BmiI GGNNCC 6 cut(s) 215, 1363, 1571, 1681, 2041, 2303
BmrFI CCNGG 3 cut(s) 1131, 2320, 2535
BmsI GCATC 5 cut(s) 349, 367, 754, 1408, 2494
BpiI GAAGAC 1 cut(s) 16
BpmI CTGGAG 1 cut(s) 1826
Bpu14I TTCGAA 1 cut(s) 2619
BpuEI CTTGAG 3 cut(s) 665, 1066, 2691
BpuMI CCSGG 1 cut(s) 2320
BsaI GGTCTC 1 cut(s) 886
BsaJI CCNNGG 7 cut(s) 783, 829, 1152, 1559, 1707, 2287, 2533
BsaWI WCCGGW 4 cut(s) 210, 393, 877, 2186
BsaXI ACNNNNNCTCC 2 cut(s) 1188, 1218
Bse118I RCCGGY 1 cut(s) 1370
Bse1I ACTGG 7 cut(s) 110, 154, 820, 1514, 1683, 1809, 2238
BseAI TCCGGA 1 cut(s) 210
BseBI CCWGG 2 cut(s) 1131, 2535
BseDI CCNNGG 7 cut(s) 783, 829, 1152, 1559, 1707, 2287, 2533
BseGI GGATG 6 cut(s) 116, 248, 296, 543, 745, 1270
BseMII CTCAG 3 cut(s) 1500, 2259, 2646
BseNI ACTGG 7 cut(s) 110, 154, 820, 1514, 1683, 1809, 2238
BseRI GAGGAG 2 cut(s) 2205, 2500
BseSI GKGCMC 1 cut(s) 309
BseXI GCAGC 3 cut(s) 1285, 2011, 2611
BseYI CCCAGC 1 cut(s) 941
Bsh1236I CGCG 2 cut(s) 61, 1656
BshFI GGCC 6 cut(s) 109, 782, 1050, 1129, 1659, 2286
BshNI GGYRCC 2 cut(s) 1361, 1679
BsiHKAI GWGCWC 1 cut(s) 913
BsiHKCI CYCGRG 1 cut(s) 2251
BsiSI CCGG 6 cut(s) 211, 394, 878, 1371, 2187, 2319
BslFI GGGAC 4 cut(s) 371, 1583, 2017, 2393
BsmAI GTCTC 5 cut(s) 162, 289, 600, 886, 2187
BsmFI GGGAC 4 cut(s) 371, 1583, 2017, 2393
BsnI GGCC 6 cut(s) 109, 782, 1050, 1129, 1659, 2286
Bso31I GGTCTC 1 cut(s) 886
BsoBI CYCGRG 1 cut(s) 2251
Bsp119I TTCGAA 1 cut(s) 2619
Bsp1286I GDGCHC 2 cut(s) 309, 913
Bsp13I TCCGGA 1 cut(s) 210
Bsp19I CCATGG 2 cut(s) 783, 1707
BspACI CCGC 2 cut(s) 1656, 2256
BspANI GGCC 6 cut(s) 109, 782, 1050, 1129, 1659, 2286
BspCNI CTCAG 3 cut(s) 1499, 2258, 2647
BspEI TCCGGA 1 cut(s) 210
BspFNI CGCG 2 cut(s) 61, 1656
BspHI TCATGA 1 cut(s) 1879
BspLI GGNNCC 6 cut(s) 215, 1363, 1571, 1681, 2041, 2303
BspMAI CTGCAG 1 cut(s) 1303
BspPI GGATC 4 cut(s) 208, 221, 2422, 2568
BspQI GCTCTTC 1 cut(s) 1329
BspT104I TTCGAA 1 cut(s) 2619
BspT107I GGYRCC 2 cut(s) 1361, 1679
BspTI CTTAAG 1 cut(s) 1406
BspTNI GGTCTC 1 cut(s) 886
BsrBI CCGCTC 1 cut(s) 2256
BsrFI RCCGGY 1 cut(s) 1370
BsrI ACTGG 7 cut(s) 110, 154, 820, 1514, 1683, 1809, 2238
BssAI RCCGGY 1 cut(s) 1370
BssECI CCNNGG 7 cut(s) 783, 829, 1152, 1559, 1707, 2287, 2533
BssNAI GTATAC 2 cut(s) 641, 1827
BssSI CACGAG 1 cut(s) 381
BssT1I CCWWGG 6 cut(s) 783, 829, 1152, 1559, 1707, 2287
Bst1107I GTATAC 2 cut(s) 641, 1827
Bst2BI CACGAG 1 cut(s) 381
Bst2UI CCWGG 2 cut(s) 1131, 2535
Bst4CI ACNGT 8 cut(s) 425, 594, 610, 1824, 1852, 2279, 2542, 2671
Bst6I CTCTTC 2 cut(s) 1329, 2587
BstAFI CTTAAG 1 cut(s) 1406
BstBI TTCGAA 1 cut(s) 2619
BstC8I GCNNGC 1 cut(s) 1372
BstDEI CTNAG 6 cut(s) 1486, 1736, 1871, 1950, 2245, 2655
BstDSI CCRYGG 2 cut(s) 783, 1707
BstEII GGTNACC 1 cut(s) 1234
BstF5I GGATG 6 cut(s) 116, 248, 296, 543, 745, 1270
BstFNI CGCG 2 cut(s) 61, 1656
BstH2I RGCGCY 1 cut(s) 1371
BstHHI GCGC 3 cut(s) 63, 1370, 2261
BstMAI GTCTC 5 cut(s) 162, 289, 600, 886, 2187
BstMWI GCNNNNNNNGC 6 cut(s) 269, 728, 764, 773, 2292, 2324
BstNI CCWGG 2 cut(s) 1131, 2535
BstPI GGTNACC 1 cut(s) 1234
BstSCI CCNGG 3 cut(s) 1129, 2318, 2533
BstSFI CTRYAG 2 cut(s) 1299, 2541
BstSLI GKGCMC 1 cut(s) 309
BstUI CGCG 2 cut(s) 61, 1656
BstV1I GCAGC 3 cut(s) 1285, 2011, 2611
BstV2I GAAGAC 1 cut(s) 16
BstX2I RGATCY 5 cut(s) 70, 213, 676, 862, 2427
BstYI RGATCY 5 cut(s) 70, 213, 676, 862, 2427
BstZ17I GTATAC 2 cut(s) 641, 1827
BsuRI GGCC 6 cut(s) 109, 782, 1050, 1129, 1659, 2286
BtgI CCRYGG 2 cut(s) 783, 1707
BtsCI GGATG 6 cut(s) 116, 248, 296, 543, 745, 1270
BtsI GCAGTG 3 cut(s) 783, 1308, 2700
BtsIMutI CAGTG 9 cut(s) 117, 783, 958, 1037, 1285, 1308, 1820, 2565, 2700
Cac8I GCNNGC 1 cut(s) 1372
CaiI CAGNNNCTG 2 cut(s) 1493, 2540
CciI TCATGA 1 cut(s) 1879
CfoI GCGC 3 cut(s) 63, 1370, 2261
Cfr10I RCCGGY 1 cut(s) 1370
Cfr13I GGNCC 7 cut(s) 107, 893, 1048, 1115, 1570, 1658, 2302
Csp6I GTAC 3 cut(s) 164, 1307, 2636
CviQI GTAC 3 cut(s) 164, 1307, 2636
DdeI CTNAG 6 cut(s) 1486, 1736, 1871, 1950, 2245, 2655
DraI TTTAAA 1 cut(s) 2107
DriI GACNNNNNGTC 1 cut(s) 515
EaeI YGGCCR 2 cut(s) 780, 1127
Eam1104I CTCTTC 2 cut(s) 1329, 2587
Eam1105I GACNNNNNGTC 1 cut(s) 515
EarI CTCTTC 2 cut(s) 1329, 2587
Ecl136II GAGCTC 1 cut(s) 911
Eco130I CCWWGG 6 cut(s) 783, 829, 1152, 1559, 1707, 2287
Eco24I GRGCYC 1 cut(s) 913
Eco31I GGTCTC 1 cut(s) 886
Eco47I GGWCC 4 cut(s) 893, 1115, 1570, 2302
Eco53kI GAGCTC 1 cut(s) 911
Eco57I CTGAAG 3 cut(s) 1261, 1976, 2613
Eco88I CYCGRG 1 cut(s) 2251
Eco91I GGTNACC 1 cut(s) 1234
EcoICRI GAGCTC 1 cut(s) 911
EcoO109I RGGNCCY 3 cut(s) 1048, 1570, 2302
EcoO65I GGTNACC 1 cut(s) 1234
EcoRII CCWGG 2 cut(s) 1129, 2533
EcoT14I CCWWGG 6 cut(s) 783, 829, 1152, 1559, 1707, 2287
EcoT22I ATGCAT 1 cut(s) 2685
EcoT38I GRGCYC 1 cut(s) 913
ErhI CCWWGG 6 cut(s) 783, 829, 1152, 1559, 1707, 2287
FalI AAGNNNNNCTT 4 cut(s) 1075, 1107, 1389, 1421
FaqI GGGAC 4 cut(s) 371, 1583, 2017, 2393
FauNDI CATATG 2 cut(s) 889, 1318
FbaI TGATCA 2 cut(s) 1761, 2569
FblI GTMKAC 3 cut(s) 640, 1826, 2154
Fnu4HI GCNGC 5 cut(s) 1299, 1657, 2025, 2257, 2600
FokI GGATG 6 cut(s) 103, 235, 303, 550, 752, 1277
FriOI GRGCYC 1 cut(s) 913
Fsp4HI GCNGC 5 cut(s) 1299, 1657, 2025, 2257, 2600
FspBI CTAG 7 cut(s) 14, 68, 507, 924, 1052, 1749, 2271
GlaI GCGC 3 cut(s) 62, 1369, 2260
GluI GCNGC 5 cut(s) 1299, 1657, 2025, 2257, 2600
GsaI CCCAGC 1 cut(s) 945
GsuI CTGGAG 1 cut(s) 1826
HaeII RGCGCY 1 cut(s) 1371
HaeIII GGCC 6 cut(s) 109, 782, 1050, 1129, 1659, 2286
HapII CCGG 6 cut(s) 211, 394, 878, 1371, 2187, 2319
HhaI GCGC 3 cut(s) 63, 1370, 2261
Hin6I GCGC 3 cut(s) 61, 1368, 2259
HinP1I GCGC 3 cut(s) 61, 1368, 2259
HincII GTYRAC 1 cut(s) 2662
HindII GTYRAC 1 cut(s) 2662
HindIII AAGCTT 1 cut(s) 2054
HpaII CCGG 6 cut(s) 211, 394, 878, 1371, 2187, 2319
HphI GGTGA 3 cut(s) 1022, 2511, 2540
Hpy166II GTNNAC 9 cut(s) 484, 641, 1088, 1468, 1827, 1915, 2155, 2548, 2662
Hpy188I TCNGA 6 cut(s) 75, 1489, 2248, 2407, 2560, 2632
Hpy8I GTNNAC 9 cut(s) 484, 641, 1088, 1468, 1827, 1915, 2155, 2548, 2662
Hpy99I CGWCG 2 cut(s) 425, 2318
HpyAV CCTTC 8 cut(s) 204, 542, 835, 863, 1101, 1951, 2637, 2655
HpyCH4III ACNGT 8 cut(s) 425, 594, 610, 1824, 1852, 2279, 2542, 2671
HpyCH4IV ACGT 4 cut(s) 970, 1887, 2140, 2634
HpyF10VI GCNNNNNNNGC 6 cut(s) 269, 728, 764, 773, 2292, 2324
HpyF3I CTNAG 6 cut(s) 1486, 1736, 1871, 1950, 2245, 2655
HpySE526I ACGT 4 cut(s) 970, 1887, 2140, 2634
HspAI GCGC 3 cut(s) 61, 1368, 2259
Kpn2I TCCGGA 1 cut(s) 210
KroI GCCGGC 1 cut(s) 1370
KroNI GCCGGC 1 cut(s) 1372
Ksp22I TGATCA 2 cut(s) 1761, 2569
LguI GCTCTTC 1 cut(s) 1329
Lsp1109I GCAGC 3 cut(s) 1285, 2011, 2611
LweI GCATC 5 cut(s) 349, 367, 754, 1408, 2494
MaeI CTAG 7 cut(s) 14, 68, 507, 924, 1052, 1749, 2271
MaeII ACGT 4 cut(s) 970, 1887, 2140, 2634
MaeIII GTNAC 4 cut(s) 112, 841, 1234, 1267
MbiI CCGCTC 1 cut(s) 2256
MboII GAAGA 5 cut(s) 21, 686, 1316, 1988, 2574
MfeI CAATTG 6 cut(s) 273, 789, 801, 837, 1023, 2716
MflI RGATCY 5 cut(s) 70, 213, 676, 862, 2427
MhlI GDGCHC 2 cut(s) 309, 913
MlsI TGGCCA 2 cut(s) 782, 1129
MluNI TGGCCA 2 cut(s) 782, 1129
MlyI GAGTC 3 cut(s) 239, 2243, 2462
MmeI TCCRAC 3 cut(s) 836, 873, 2572
Mox20I TGGCCA 2 cut(s) 782, 1129
Mph1103I ATGCAT 1 cut(s) 2685
MroI TCCGGA 1 cut(s) 210
MroNI GCCGGC 1 cut(s) 1370
MroXI GAANNNNTTC 2 cut(s) 873, 2692
MscI TGGCCA 2 cut(s) 782, 1129
Msp20I TGGCCA 2 cut(s) 782, 1129
MspA1I CMGCKG 2 cut(s) 494, 2399
MspCI CTTAAG 1 cut(s) 1406
MspI CCGG 6 cut(s) 211, 394, 878, 1371, 2187, 2319
MspR9I CCNGG 3 cut(s) 1131, 2320, 2535
MunI CAATTG 6 cut(s) 273, 789, 801, 837, 1023, 2716
MvaI CCWGG 2 cut(s) 1131, 2535
MvnI CGCG 2 cut(s) 61, 1656
MwoI GCNNNNNNNGC 6 cut(s) 269, 728, 764, 773, 2292, 2324
NaeI GCCGGC 1 cut(s) 1372
NciI CCSGG 1 cut(s) 2320
NcoI CCATGG 2 cut(s) 783, 1707
NdeI CATATG 2 cut(s) 889, 1318
NgoMIV GCCGGC 1 cut(s) 1370
NlaIV GGNNCC 6 cut(s) 215, 1363, 1571, 1681, 2041, 2303
NmuCI GTSAC 2 cut(s) 112, 1267
NsiI ATGCAT 1 cut(s) 2685
NspV TTCGAA 1 cut(s) 2619
PaeR7I CTCGAG 1 cut(s) 2251
PagI TCATGA 1 cut(s) 1879
PciSI GCTCTTC 1 cut(s) 1329
PdiI GCCGGC 1 cut(s) 1372
PdmI GAANNNNTTC 2 cut(s) 873, 2692
PfeI GAWTC 8 cut(s) 339, 974, 1490, 1752, 1876, 1946, 2234, 2402
PflMI CCANNNNNTGG 4 cut(s) 725, 1158, 1175, 1689
PkrI GCNGC 5 cut(s) 1300, 1658, 2026, 2258, 2601
PleI GAGTC 3 cut(s) 239, 2243, 2462
PpsI GAGTC 3 cut(s) 239, 2243, 2462
PpuMI RGGWCCY 2 cut(s) 1570, 2302
PshBI ATTAAT 2 cut(s) 141, 1641
Psp124BI GAGCTC 1 cut(s) 913
Psp1406I AACGTT 2 cut(s) 1887, 2140
Psp5II RGGWCCY 2 cut(s) 1570, 2302
Psp6I CCWGG 2 cut(s) 1129, 2533
PspEI GGTNACC 1 cut(s) 1234
PspFI CCCAGC 1 cut(s) 941
PspGI CCWGG 2 cut(s) 1129, 2533
PspN4I GGNNCC 6 cut(s) 215, 1363, 1571, 1681, 2041, 2303
PspPI GGNCC 7 cut(s) 107, 893, 1048, 1115, 1570, 1658, 2302
PspPPI RGGWCCY 2 cut(s) 1570, 2302
PspXI VCTCGAGB 1 cut(s) 2251
PstI CTGCAG 1 cut(s) 1303
PstNI CAGNNNCTG 2 cut(s) 1493, 2540
PsuI RGATCY 5 cut(s) 70, 213, 676, 862, 2427
PvuII CAGCTG 2 cut(s) 494, 2399
RsaI GTAC 3 cut(s) 165, 1308, 2637
RsaNI GTAC 3 cut(s) 164, 1307, 2636
SacI GAGCTC 1 cut(s) 913
SapI GCTCTTC 1 cut(s) 1329
SatI GCNGC 5 cut(s) 1299, 1657, 2025, 2257, 2600
Sau96I GGNCC 7 cut(s) 107, 893, 1048, 1115, 1570, 1658, 2302
SchI GAGTC 3 cut(s) 239, 2243, 2462
ScrFI CCNGG 3 cut(s) 1131, 2320, 2535
SduI GDGCHC 2 cut(s) 309, 913
SfaNI GCATC 5 cut(s) 349, 367, 754, 1408, 2494
SfcI CTRYAG 2 cut(s) 1299, 2541
Sfr274I CTCGAG 1 cut(s) 2251
SfuI TTCGAA 1 cut(s) 2619
SinI GGWCC 4 cut(s) 893, 1115, 1570, 2302
SlaI CTCGAG 1 cut(s) 2251
SmlI CTYRAG 5 cut(s) 680, 1081, 1406, 2251, 2706
SmoI CTYRAG 5 cut(s) 680, 1081, 1406, 2251, 2706
SsiI CCGC 2 cut(s) 1656, 2256
SspI AATATT 1 cut(s) 2072
SspMI CTAG 7 cut(s) 14, 68, 507, 924, 1052, 1749, 2271
SstI GAGCTC 1 cut(s) 913
StyD4I CCNGG 3 cut(s) 1129, 2318, 2533
StyI CCWWGG 6 cut(s) 783, 829, 1152, 1559, 1707, 2287
TaaI ACNGT 8 cut(s) 425, 594, 610, 1824, 1852, 2279, 2542, 2671
TaiI ACGT 4 cut(s) 973, 1890, 2143, 2637
TaqI TCGA 8 cut(s) 458, 857, 1284, 1521, 1636, 2252, 2414, 2619
TauI GCSGC 2 cut(s) 1659, 2259
TfiI GAWTC 8 cut(s) 339, 974, 1490, 1752, 1876, 1946, 2234, 2402
TscAI CASTG 9 cut(s) 117, 783, 958, 1044, 1285, 1308, 1827, 2572, 2707
TseFI GTSAC 2 cut(s) 112, 1267
TseI GCWGC 3 cut(s) 1298, 2024, 2599
Tsp45I GTSAC 2 cut(s) 112, 1267
TspGWI ACGGA 1 cut(s) 1277
TspRI CASTG 9 cut(s) 117, 783, 958, 1044, 1285, 1308, 1827, 2572, 2707
Van91I CCANNNNNTGG 4 cut(s) 725, 1158, 1175, 1689
Vha464I CTTAAG 1 cut(s) 1406
VpaK11BI GGWCC 4 cut(s) 893, 1115, 1570, 2302
VspI ATTAAT 2 cut(s) 141, 1641
XapI RAATTY 7 cut(s) 946, 982, 1103, 1135, 1412, 1649, 2445
XbaI TCTAGA 2 cut(s) 67, 506
XhoI CTCGAG 1 cut(s) 2251
XmiI GTMKAC 3 cut(s) 640, 1826, 2154
XmnI GAANNNNTTC 2 cut(s) 873, 2692
XspI CTAG 7 cut(s) 14, 68, 507, 924, 1052, 1749, 2271
Zsp2I ATGCAT 1 cut(s) 2685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.