RLG00000023449

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Forward (+)
23951935 .. 23958051
6117 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023449

Sequence Viewer

Length: 2709 bp
ATGATCAAGAATCCTACCAGCCCTGTTTCTTCTTTTCTCATTTTCCTTTTATTGTTTAGGAATTCCTTAGCTGCTGCCCAAAACACAACGATCCCAGTAGATGTGGGTATGATCCTTGACTTTGATTCTTTGTTTGGGAAGATTGGGCTGAGCTGCGTCAACATGGCTCTATCCGACTTCTATGCCTCTCATGCTTACTACAAAACCAGGCTGGTACTACACACAAGGGACTCCATGAGAGATGCTGTTGTTGAAGCTGCTGCAGCTCTAGACTTGATAAAAAATATTGAAGTGAAAGCTATCATCATAGGGGCGGAATCATCAATGAAAGCCAACTTTGTAATTGATCTTGGAGATAAAGCTAAGGTGCCTATAATCTCATTTTCGACGGCAAACCCTTCCCTGTCTTCTTTTCAGCGTTCATATTTTTTCCAAGTTGCAAAGAATGACTCATCTCAAGTGAAAGCCATAAGTGCCATAATTCAATCTTTTGGCTGGAATGAAGCAGTGCCCATTTTTGTCGACGATGAGTTTTGGGAGGGTACATTACCTTACATGATTAATGTTCTACAAGAAGTCGGTGCTCGTATTCCCTACTGGAGTGTCATTCCTCTAATGGCCACTGATGACCAAATTGTTGTGAAGCTTCAACATCTCATGACAATGAAAACAAGGGTATTCATTGTACACATGTTGCCTTCTCTTGGCTCCCGGGTTTTTGCCAAGGCAAAAGAGATGGGCATGATGGGTGAAGGTTATGTTTGGATAATGACAGATGGAATGACCAACTCTTTTGGATCCATAAATTCTTCTGTCACAGATAACATGCAAGGTGTGTTAGCATTAAGAACTTATGTTCCAAATACACAAGAGCTTGAAAATTTCAGAGTCCGATGGCACAGAAAATTCCAAATAGAGAATCCAACCATCCTTAATGTTAGATCGGATGATATTTTTGGACTGTGGGCTTATGATGCTGCTTGGGCACTAGCCATGGCAGTTGAGAAGGTTATAAATTCTACAAGCTCCAACTTTCAAAAGGTGAACATTTCTGGCAGTTCCACTGATCTAGAACGATTAGGGGTCTCTGAAAGTGGTCCTGAACTCGTCCAAGCACTATCAAGGACAAAATTCAGAGGCCTTTCTGGAAATTTCAGTCTTCTTAATGGACAACTACAATCTTCAATTTTTGAGATAGTCAATGTGAATGGTAATGGGGTAAGAGGAGTTGGATATTGGACACCCAAAAATGGACTTGTTAGAAATTTAAATTCGGCAAGCAGCGGATATTCTAGTTCTACTTCCAATCCCAGTGACCTTGGACTTATTATATGGCCCGGAGACACCATCACCATTCCAAAAGGTTGGCAGATTCCTAACCATGGGAATAAGTTGAAAATTCTAGTTCCAGTGAAGCATGGGTTTAAAGAATTTGTAAATGTGACAGTGGATCCTACAACTAACACAACCATGTTCACTGGATATTGCATAGACATGTTTAAAGCAGTAATCGAAGAATTACCATATGCTGTCTCTTATGAATTTTATCCCTTTGTAAAGCCTAATGGTGAACCAGCTGGCAGCTACGAGGATTTGATCTCTCAAGTGTTTCTTGGGATATCTGATGAATATATACACACAATTAGGTATGTATGCACATTTACATTACGTATTGATAGGAATATATATATATATATATATATATATATATATATATATATATATATATATATTATGATGATCTGGGAGAAAGTAGTGAGCAACTTAGGTAGGACTGTGGTGATCGTGTGGTGCTTTGTTGTCCTCATACTGACACAAAGTTATACTGCCAGTTTGACATCACTTTTAACAGTTCAACAGCTCCAACCAACCGTTGCTAATGTAGGTCTGCTCCTCAAGAATGGAGACTTCGTTGGCTTCCAAGAAGGTTCTTCTGTACAGAACTTTTTGACATATGAACTGGGATTTCATGTGGAAAAGCTTAGGGCATATAGGTCTGCCGAAGATCTGGCTCAACTGTTTGAGAAAGGGACAATTTCTGCTGCTTTTGATGAAACCCCTTTCATGAACCTTTTCCTTTCAACTTATTGCTCAAAATATACCATGGTTGAGCCAATACTATCCAAAACTGGCAGCGGCTTTGCATTTGCCTTTACGAAAGGTGTGCCTCTTACACTAGATGTTTCAAGGATGATCACTAATTTGCAAGAGGGAGGTAAAATGAAAACTGTCATGGACAAGTGGTTCAAGAAAGAAGCAAGTTGTACATACCCCAGCATAGACTCTAATTCCAACAGTCCTCTAAGCCTTGATAGCCTTTGGGGTCTTTTCCTTATTGTTGGAGCTACTTCGTCATCAGCTCTTCTGATACATGTAGCTATGGTCTTCTATCAGAATCGGCACGTCTTGATACCCTCGGATCCAGAACTCTCTCTTTGGAGGAAAATGAGTCTCATGTTACAGATATTCGACCAAAGAGACCTCCCTTCGCATACTTTTGGGCGCAGGGATCAGCAAGATAATGCTCAAGCTAGAGCTTCAGTTGATTCCTCACCGAACATCATAACCAATAGCTTGCCAAGGCCATCAGATTTTTCACACCACGCAAGTTCAGATATTACTGATTTTGAAATGCAGGAAACACCTTCTAGTTCTACCAACGGGGATTATTTGAATCCCAGTGGTCAGGCCATCCAAGAGACTCGATGA

Protein Analysis

903

Amino Acids

100.69

Weight (kDa)

5.86

Isoelectric Point (pI)

35.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 32 - 344 6e-12 Periplasmic binding protein
ANF_receptor PF01094 52 - 405 3.6e-78 Receptor family ligand binding region
Lig_chan PF00060 583 - 782 3.2e-19 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1013
AccB1I GGYRCC 1 cut(s) 367
AccI GTMKAC 1 cut(s) 522
AciI CCGC 3 cut(s) 314, 1284, 2136
AclWI GGATC 9 cut(s) 85, 106, 792, 805, 1445, 1458, 2414, 2427, 2517
AcoI YGGCCR 1 cut(s) 618
AcuI CTGAAG 1 cut(s) 2523
AfaI GTAC 5 cut(s) 216, 544, 687, 1938, 2266
AfiI CCNNNNNNNGG 3 cut(s) 704, 1250, 1382
AflIII ACRYGT 3 cut(s) 690, 1494, 2371
AjiI CACGTC 1 cut(s) 2404
AjnI CCWGG 1 cut(s) 206
AloI GAACNNNNNNTCC 4 cut(s) 841, 873, 2228, 2260
Alw21I GWGCWC 1 cut(s) 586
Alw26I GTCTC 7 cut(s) 1090, 1335, 1537, 1899, 2456, 2472, 2693
AlwI GGATC 9 cut(s) 85, 106, 792, 805, 1445, 1458, 2414, 2427, 2517
Ama87I CYCGRG 1 cut(s) 711
AoxI GGCC 5 cut(s) 618, 1138, 1334, 2582, 2688
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 2072
AspLEI GCGC 1 cut(s) 2505
AspS9I GGNCC 2 cut(s) 1097, 1335
AsuC2I CCSGG 3 cut(s) 712, 713, 1338
AsuHPI GGTGA 6 cut(s) 761, 1054, 1342, 1580, 1792, 2544
AvaI CYCGRG 1 cut(s) 711
AvaII GGWCC 1 cut(s) 1097
BaeGI GKGCMC 2 cut(s) 513, 988
BalI TGGCCA 1 cut(s) 620
BamHI GGATCC 3 cut(s) 797, 1450, 2419
BanI GGYRCC 1 cut(s) 367
BbsI GAAGAC 3 cut(s) 399, 1151, 2377
Bbv12I GWGCWC 1 cut(s) 586
BccI CCATC 8 cut(s) 730, 739, 770, 888, 935, 1355, 2593, 2699
BceAI ACGGC 1 cut(s) 405
BcgI CGANNNNNNTGC 4 cut(s) 164, 198, 2146, 2180
BciT130I CCWGG 1 cut(s) 208
BclI TGATCA 2 cut(s) 3, 2193
BcnI CCSGG 3 cut(s) 712, 713, 1338
BcoDI GTCTC 7 cut(s) 1090, 1335, 1537, 1899, 2456, 2472, 2693
BfaI CTAG 8 cut(s) 269, 989, 1070, 1293, 1403, 2177, 2532, 2649
BfmI CTRYAG 1 cut(s) 261
BglII AGATCT 1 cut(s) 2005
BlpI GCTNAGC 1 cut(s) 149
Bme1390I CCNGG 4 cut(s) 208, 712, 713, 1338
Bme18I GGWCC 1 cut(s) 1097
BmeT110I CYCGRG 1 cut(s) 711
BmgBI CACGTC 1 cut(s) 2404
BmgT120I GGNCC 2 cut(s) 1097, 1335
BmiI GGNNCC 5 cut(s) 369, 709, 799, 1452, 2421
BmrFI CCNGG 4 cut(s) 208, 712, 713, 1338
BmrI ACTGGG 4 cut(s) 89, 1305, 1970, 2673
BmsI GCATC 2 cut(s) 232, 964
BmuI ACTGGG 4 cut(s) 89, 1305, 1970, 2673
BpiI GAAGAC 3 cut(s) 399, 1151, 2377
BpmI CTGGAG 1 cut(s) 619
Bpu10I CCTNAGC 3 cut(s) 67, 363, 1982
Bpu1102I GCTNAGC 1 cut(s) 149
BpuEI CTTGAG 4 cut(s) 441, 1587, 1880, 2511
BpuMI CCSGG 3 cut(s) 712, 713, 1338
BsaAI YACGTR 1 cut(s) 1670
BsaI GGTCTC 2 cut(s) 1090, 2472
BsaJI CCNNGG 8 cut(s) 711, 723, 993, 1318, 1381, 2103, 2415, 2579
BsaXI ACNNNNNCTCC 2 cut(s) 1896, 1926
Bsc4I CCNNNNNNNGG 3 cut(s) 704, 1250, 1382
Bse1I ACTGG 9 cut(s) 95, 602, 1311, 1409, 1483, 1830, 1965, 2134, 2679
BseBI CCWGG 1 cut(s) 208
BseDI CCNNGG 8 cut(s) 711, 723, 993, 1318, 1381, 2103, 2415, 2579
BseGI GGATG 4 cut(s) 927, 952, 2196, 2691
BseLI CCNNNNNNNGG 3 cut(s) 704, 1250, 1382
BseMII CTCAG 1 cut(s) 140
BseNI ACTGG 9 cut(s) 95, 602, 1311, 1409, 1483, 1830, 1965, 2134, 2679
BseRI GAGGAG 2 cut(s) 1239, 1883
BseSI GKGCMC 2 cut(s) 513, 988
BseYI CCCAGC 1 cut(s) 2273
BshFI GGCC 5 cut(s) 620, 1140, 1336, 2584, 2690
BshNI GGYRCC 1 cut(s) 367
BsiHKAI GWGCWC 1 cut(s) 586
BsiHKCI CYCGRG 1 cut(s) 711
BsiSI CCGG 2 cut(s) 712, 1338
BslFI GGGAC 2 cut(s) 242, 2044
BslI CCNNNNNNNGG 3 cut(s) 704, 1250, 1382
BsmAI GTCTC 7 cut(s) 1090, 1335, 1537, 1899, 2456, 2472, 2693
BsmFI GGGAC 2 cut(s) 242, 2044
BsnI GGCC 5 cut(s) 620, 1140, 1336, 2584, 2690
Bso31I GGTCTC 2 cut(s) 1090, 2472
BsoBI CYCGRG 1 cut(s) 711
Bsp1286I GDGCHC 3 cut(s) 513, 586, 988
Bsp1407I TGTACA 3 cut(s) 685, 1936, 2264
Bsp1720I GCTNAGC 1 cut(s) 149
Bsp19I CCATGG 3 cut(s) 993, 1381, 2103
BspACI CCGC 3 cut(s) 314, 1284, 2136
BspANI GGCC 5 cut(s) 620, 1140, 1336, 2584, 2690
BspCNI CTCAG 1 cut(s) 141
BspHI TCATGA 2 cut(s) 657, 2064
BspLI GGNNCC 5 cut(s) 369, 709, 799, 1452, 2421
BspMAI CTGCAG 1 cut(s) 265
BspPI GGATC 9 cut(s) 85, 106, 792, 805, 1445, 1458, 2414, 2427, 2517
BspQI GCTCTTC 1 cut(s) 2367
BspT107I GGYRCC 1 cut(s) 367
BspTNI GGTCTC 2 cut(s) 1090, 2472
BsrGI TGTACA 3 cut(s) 685, 1936, 2264
BsrI ACTGG 9 cut(s) 95, 602, 1311, 1409, 1483, 1830, 1965, 2134, 2679
BssECI CCNNGG 8 cut(s) 711, 723, 993, 1318, 1381, 2103, 2415, 2579
BssT1I CCWWGG 6 cut(s) 723, 993, 1318, 1381, 2103, 2579
Bst2UI CCWGG 1 cut(s) 208
Bst4CI ACNGT 8 cut(s) 963, 1447, 1777, 1852, 1873, 2019, 2230, 2297
Bst6I CTCTTC 1 cut(s) 2367
BstAUI TGTACA 3 cut(s) 685, 1936, 2264
BstBAI YACGTR 1 cut(s) 1670
BstC8I GCNNGC 3 cut(s) 1279, 1579, 2576
BstDEI CTNAG 6 cut(s) 67, 149, 363, 1765, 1982, 2303
BstDSI CCRYGG 3 cut(s) 993, 1381, 2103
BstF5I GGATG 4 cut(s) 927, 952, 2196, 2691
BstHHI GCGC 1 cut(s) 2505
BstMAI GTCTC 7 cut(s) 1090, 1335, 1537, 1899, 2456, 2472, 2693
BstMWI GCNNNNNNNGC 6 cut(s) 191, 263, 473, 974, 983, 2313
BstNI CCWGG 1 cut(s) 208
BstNSI RCATGY 4 cut(s) 694, 829, 1498, 2375
BstSCI CCNGG 4 cut(s) 206, 710, 711, 1336
BstSFI CTRYAG 1 cut(s) 261
BstSLI GKGCMC 2 cut(s) 513, 988
BstSNI TACGTA 1 cut(s) 1670
BstV2I GAAGAC 3 cut(s) 399, 1151, 2377
BstX2I RGATCY 4 cut(s) 797, 1450, 2005, 2419
BstXI CCANNNNNNTGG 1 cut(s) 1365
BstYI RGATCY 4 cut(s) 797, 1450, 2005, 2419
BsuRI GGCC 5 cut(s) 620, 1140, 1336, 2584, 2690
BtgI CCRYGG 3 cut(s) 993, 1381, 2103
BtrI CACGTC 1 cut(s) 2404
BtsCI GGATG 4 cut(s) 927, 952, 2196, 2691
BtsI GCAGTG 1 cut(s) 513
BtsIMutI CAGTG 8 cut(s) 513, 621, 1062, 1318, 1416, 1452, 1476, 2686
Cac8I GCNNGC 3 cut(s) 1279, 1579, 2576
CciI TCATGA 2 cut(s) 657, 2064
CfoI GCGC 1 cut(s) 2505
Cfr13I GGNCC 2 cut(s) 1097, 1335
Cfr9I CCCGGG 1 cut(s) 711
CseI GACGC 1 cut(s) 145
Csp6I GTAC 5 cut(s) 215, 543, 686, 1937, 2265
CviQI GTAC 5 cut(s) 215, 543, 686, 1937, 2265
DdeI CTNAG 6 cut(s) 67, 149, 363, 1765, 1982, 2303
DraI TTTAAA 3 cut(s) 1269, 1426, 1501
EaeI YGGCCR 1 cut(s) 618
Eam1104I CTCTTC 1 cut(s) 2367
EarI CTCTTC 1 cut(s) 2367
EciI GGCGGA 1 cut(s) 329
Eco105I TACGTA 1 cut(s) 1670
Eco130I CCWWGG 6 cut(s) 723, 993, 1318, 1381, 2103, 2579
Eco147I AGGCCT 1 cut(s) 1140
Eco31I GGTCTC 2 cut(s) 1090, 2472
Eco32I GATATC 1 cut(s) 1620
Eco47I GGWCC 1 cut(s) 1097
Eco57I CTGAAG 1 cut(s) 2523
Eco88I CYCGRG 1 cut(s) 711
EcoRI GAATTC 1 cut(s) 61
EcoRII CCWGG 1 cut(s) 206
EcoRV GATATC 1 cut(s) 1620
EcoT14I CCWWGG 6 cut(s) 723, 993, 1318, 1381, 2103, 2579
ErhI CCWWGG 6 cut(s) 723, 993, 1318, 1381, 2103, 2579
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 2 cut(s) 242, 2044
FauNDI CATATG 2 cut(s) 1525, 1954
FbaI TGATCA 2 cut(s) 3, 2193
FblI GTMKAC 1 cut(s) 522
FokI GGATG 4 cut(s) 914, 959, 2203, 2678
FspBI CTAG 8 cut(s) 269, 989, 1070, 1293, 1403, 2177, 2532, 2649
GlaI GCGC 1 cut(s) 2504
GsaI CCCAGC 1 cut(s) 2277
GsuI CTGGAG 1 cut(s) 619
HaeIII GGCC 5 cut(s) 620, 1140, 1336, 2584, 2690
HapII CCGG 2 cut(s) 712, 1338
HgaI GACGC 1 cut(s) 145
HhaI GCGC 1 cut(s) 2505
Hin6I GCGC 1 cut(s) 2503
HinP1I GCGC 1 cut(s) 2503
HincII GTYRAC 2 cut(s) 160, 523
HindII GTYRAC 2 cut(s) 160, 523
HindIII AAGCTT 2 cut(s) 644, 1979
HpaII CCGG 2 cut(s) 712, 1338
HphI GGTGA 6 cut(s) 761, 1054, 1342, 1580, 1792, 2544
Hpy166II GTNNAC 6 cut(s) 160, 523, 688, 1045, 1476, 1571
Hpy8I GTNNAC 6 cut(s) 160, 523, 688, 1045, 1476, 1571
Hpy99I CGWCG 2 cut(s) 391, 527
HpyAV CCTTC 7 cut(s) 408, 708, 746, 1000, 1919, 2496, 2655
HpyCH4III ACNGT 8 cut(s) 963, 1447, 1777, 1852, 1873, 2019, 2230, 2297
HpyCH4IV ACGT 2 cut(s) 1669, 2403
HpyCH4V TGCA 8 cut(s) 263, 440, 829, 1488, 1656, 2144, 2206, 2635
HpyF10VI GCNNNNNNNGC 6 cut(s) 191, 263, 473, 974, 983, 2313
HpyF3I CTNAG 6 cut(s) 67, 149, 363, 1765, 1982, 2303
HpySE526I ACGT 2 cut(s) 1669, 2403
HspAI GCGC 1 cut(s) 2503
Ksp22I TGATCA 2 cut(s) 3, 2193
LguI GCTCTTC 1 cut(s) 2367
LmnI GCTCC 5 cut(s) 713, 1031, 1866, 1896, 2342
LweI GCATC 2 cut(s) 232, 964
MaeI CTAG 8 cut(s) 269, 989, 1070, 1293, 1403, 2177, 2532, 2649
MaeII ACGT 2 cut(s) 1669, 2403
MaeIII GTNAC 4 cut(s) 814, 1313, 1441, 2457
MflI RGATCY 4 cut(s) 797, 1450, 2005, 2419
MhlI GDGCHC 3 cut(s) 513, 586, 988
MlsI TGGCCA 1 cut(s) 620
MluNI TGGCCA 1 cut(s) 620
MlyI GAGTC 6 cut(s) 224, 443, 897, 2276, 2458, 2695
MmeI TCCRAC 7 cut(s) 198, 947, 1053, 1210, 1888, 2316, 2320
Mox20I TGGCCA 1 cut(s) 620
MroXI GAANNNNTTC 1 cut(s) 2072
MscI TGGCCA 1 cut(s) 620
MseI TTAA 8 cut(s) 561, 845, 933, 1164, 1268, 1425, 1500, 1847
MslI CAYNNNNRTG 3 cut(s) 662, 1469, 1493
Msp20I TGGCCA 1 cut(s) 620
MspA1I CMGCKG 3 cut(s) 1284, 1577, 2136
MspI CCGG 2 cut(s) 712, 1338
MspR9I CCNGG 4 cut(s) 208, 712, 713, 1338
MvaI CCWGG 1 cut(s) 208
MwoI GCNNNNNNNGC 6 cut(s) 191, 263, 473, 974, 983, 2313
NciI CCSGG 3 cut(s) 712, 713, 1338
NcoI CCATGG 3 cut(s) 993, 1381, 2103
NdeI CATATG 2 cut(s) 1525, 1954
NlaIV GGNNCC 5 cut(s) 369, 709, 799, 1452, 2421
NmuCI GTSAC 3 cut(s) 814, 1313, 1441
NspI RCATGY 4 cut(s) 694, 829, 1498, 2375
PagI TCATGA 2 cut(s) 657, 2064
PceI AGGCCT 1 cut(s) 1140
PciI ACATGT 3 cut(s) 690, 1494, 2371
PciSI GCTCTTC 1 cut(s) 2367
PdmI GAANNNNTTC 1 cut(s) 2072
PfeI GAWTC 8 cut(s) 10, 125, 317, 919, 1372, 2395, 2546, 2674
PleI GAGTC 6 cut(s) 224, 443, 896, 2276, 2457, 2695
PpsI GAGTC 6 cut(s) 224, 443, 896, 2276, 2457, 2695
Ppu21I YACGTR 1 cut(s) 1670
PscI ACATGT 3 cut(s) 690, 1494, 2371
PshBI ATTAAT 1 cut(s) 561
PsiI TTATAA 1 cut(s) 1013
Psp6I CCWGG 1 cut(s) 206
PspFI CCCAGC 1 cut(s) 2273
PspGI CCWGG 1 cut(s) 206
PspN4I GGNNCC 5 cut(s) 369, 709, 799, 1452, 2421
PspPI GGNCC 2 cut(s) 1097, 1335
PstI CTGCAG 1 cut(s) 265
PsuI RGATCY 4 cut(s) 797, 1450, 2005, 2419
PvuII CAGCTG 1 cut(s) 1577
RsaI GTAC 5 cut(s) 216, 544, 687, 1938, 2266
RsaNI GTAC 5 cut(s) 215, 543, 686, 1937, 2265
RseI CAYNNNNRTG 3 cut(s) 662, 1469, 1493
SalI GTCGAC 1 cut(s) 521
SapI GCTCTTC 1 cut(s) 2367
SaqAI TTAA 8 cut(s) 561, 845, 933, 1164, 1268, 1425, 1500, 1847
Sau96I GGNCC 2 cut(s) 1097, 1335
SchI GAGTC 6 cut(s) 224, 443, 897, 2276, 2458, 2695
ScrFI CCNGG 4 cut(s) 208, 712, 713, 1338
SduI GDGCHC 3 cut(s) 513, 586, 988
SfaNI GCATC 2 cut(s) 232, 964
SfcI CTRYAG 1 cut(s) 261
SinI GGWCC 1 cut(s) 1097
SmaI CCCGGG 1 cut(s) 713
SmiI ATTTAAAT 1 cut(s) 1269
SmiMI CAYNNNNRTG 3 cut(s) 662, 1469, 1493
SmlI CTYRAG 4 cut(s) 456, 1602, 1895, 2526
SmoI CTYRAG 4 cut(s) 456, 1602, 1895, 2526
SnaBI TACGTA 1 cut(s) 1670
SseBI AGGCCT 1 cut(s) 1140
SsiI CCGC 3 cut(s) 314, 1284, 2136
SspI AATATT 1 cut(s) 286
SspMI CTAG 8 cut(s) 269, 989, 1070, 1293, 1403, 2177, 2532, 2649
StuI AGGCCT 1 cut(s) 1140
StyD4I CCNGG 4 cut(s) 206, 710, 711, 1336
StyI CCWWGG 6 cut(s) 723, 993, 1318, 1381, 2103, 2579
SwaI ATTTAAAT 1 cut(s) 1269
TaaI ACNGT 8 cut(s) 963, 1447, 1777, 1852, 1873, 2019, 2230, 2297
TaiI ACGT 2 cut(s) 1672, 2406
TaqI TCGA 5 cut(s) 386, 522, 1512, 2469, 2704
TatI WGTACW 3 cut(s) 685, 1936, 2264
TauI GCSGC 1 cut(s) 2139
TfiI GAWTC 8 cut(s) 10, 125, 317, 919, 1372, 2395, 2546, 2674
Tru1I TTAA 8 cut(s) 561, 845, 933, 1164, 1268, 1425, 1500, 1847
Tru9I TTAA 8 cut(s) 561, 845, 933, 1164, 1268, 1425, 1500, 1847
TscAI CASTG 8 cut(s) 513, 628, 1069, 1318, 1416, 1452, 1483, 2686
TseFI GTSAC 3 cut(s) 814, 1313, 1441
Tsp45I GTSAC 3 cut(s) 814, 1313, 1441
TspMI CCCGGG 1 cut(s) 711
TspRI CASTG 8 cut(s) 513, 628, 1069, 1318, 1416, 1452, 1483, 2686
VpaK11BI GGWCC 1 cut(s) 1097
VspI ATTAAT 1 cut(s) 561
XbaI TCTAGA 2 cut(s) 268, 1069
XceI RCATGY 4 cut(s) 694, 829, 1498, 2375
XmaI CCCGGG 1 cut(s) 711
XmiI GTMKAC 1 cut(s) 522
XmnI GAANNNNTTC 1 cut(s) 2072
XspI CTAG 8 cut(s) 269, 989, 1070, 1293, 1403, 2177, 2532, 2649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.