RLG00000028853

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
29316804 .. 29321132
4329 bp
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UTR
Exon/CDS
Intron
RLM00000028853

Sequence Viewer

Length: 2406 bp
ATGGCCCTCACCGACTTCTATGCTTCTCATGCTCTTCACAACACTAAACTGGTCTTGAACATCAGGAACTCGAAAGGCAATGTTGTTCGTGCAGCTAACGCAGCTCAACATCTCATGAAACATGAACAAGTGCAAGCGATTATCGGACCAGTCACGTCAATGGAGACAAACTTCGTTATTAACCTCGGGGATCAAACCCATGTGCCCATATTATCATTTTCTGCAACAAGTCCTTCTCTTACTGCACTTCGGAGTTCCTACTTTTTCCAATTTGCACAAAATGACACATCTCAAGTAGAAGCTATTAGTGCTGTTGTTAAGGCTTTTGGATGGAGAGAAGTTGTGCCCATCTACTTAGACACTTCATACGGCGAGGGAATCATCGCGTTTTTAACTAATGCCTTACAAGAGGTAGGTGCCCTTATCCCCTATAGGAGTGTCATTTCTCCATTCGCATCCGATGATCAAATTAAGGAAGAGCTTTACAAATTGATGACAATGCAAACTAGAGTGTTCATTGTCCACATGACCACCAATGATTTAATATGCTCTAAACTGTTTACCAAGGCAAACGAGATTGGAATGATGAAGGAAGGATATGTTTGGTTAACAACTAACGGGATAGCTAATAGTTTACAGTTGTTAAATTCTTCCGTCATCCATTCCATGCATGGAGTGTTAGGTGTGGAAACTCATGTCCAACAAACCCCAGAGCTTGAAGGCTTGAAGTTAAGGTGGAAAAAACAGTTCCAAAAAGACAATCCAACGATCATCTTTGGTGTTGAATTGGATGTTTTTGGTCTGTGGGCTTATGATGCTGCTTTTGCATTGGCTATGGCAATTGAGAAAGTTTATGGACTAGCTGCTTCCCACAACAACACAGATTATAAAAGTTTTCATGTCTCTCAATATGGTCCAAAACTTCGCAAAGCCCTGTCAACTACTAGATTTCAAGGCATGGCTGGAGATTTCAGGCTTGTTGACGGACAGCTTCAATCATCAGAGTTTCAAATAATTAATGTAAATGGTGGAGGATCAAGAACAATAGGATTTTGGTCACCGGAATATGGATTATGGAACCACGTGCACCCAACAAATTCTAAGACAAATCTAGGACCTGTTATATGGCCAGGAGATTCTACCTCGGTTCCAAAGGGATGGGAGATCCCAACAAATGGGAAGACGTTGAAAATAGGAGTTCCTAAGAAGTATGGGTATCTTGAGTTTGTTAAGGTCACGAAAGATCCAAGGACTAACATAACAGATGTCACTGGGTTCTGTATTGATGTCTTTACGGCAGTTGTGGAAATATTACCGTATGCTCTTCCATATGAGTTCATTCCTTTTACAAAGCAAGATGGCACGAGCGCCGGTAGTTATAATGATTTGAGCTATGAAGTATATCGCGGGGTATTTAGATTTCTAGCTAGTGACCAACTTTATATGACTTTTTATAATTCGTGTTTTTTTTTTTTTTTTCAGTCCAGTCATCAAGAGTATGCGCTAATATTCTCTAGCCATTTTTTTTTTAATCTAAATTCAGCAAGAGTTATTAGCAATCTGGCTAGATTCGTGATGGCTATATGGATATTTGTTGTGCTAGTATTGACGATAAATTACACGGCCATCCTAACGTCAATCTATACAGTCCAACAACTCCAGCCAACTGTTGCAGAATTAAAGGATCTATTAAGCAAGGGGGACAACGTCGGCTGCAAGCCAAATGCTTACACTTGCGACATCTTGAAACAATTTGGTTTTAATGATGCCAATCTTAAGGTGTTTAGTACTATGGAAGAACTTGATGGAGCACTTTCGAAAGGGACTGCAAAAGGTGGTATTGCTGCTGCTATTGATGAAACCCCATATATGAAGCTTTTCCTTGCAAAGTATTGCAACAAATATACCATGATTGGACCCATATTTAAAACTGATGGTTTTGCCTTTGTCTTTCCAAAACGTTCCCCTCTTCTGTCTGATGTTTCACAGGCAATCCTGAATGTGACTGGAGGGGAGAAGATAATGAACATCGAACATGAATGGTTCAAGAAAGAAAGCAATTGTCAAGATTTGAGTGTCCCAAAAGTTTCTAGCAGCAGTCTTGGTGCTGATAGCTTTTGGTACAGGGACATATGGAATTCAGAAGCCTCTCTAAAGAGTTTGATTGGGGCCATGTTAAAAATTTTCAATGAAAAAGACCCCAGCTATCACACTTTTAACAGTGATCAAAGGCCAGAAGCAGCAGAAACTTCAGTCTACAATAATTCGAACCACACAGATGAGCATTCTTTATTTTCTGGAGAGCAGCAAGTACTCTCAATTGAAGGGTCTCAAGAAGCAGGTCCCGCAACCGAGGTTCGTTTCGCAACTGAAATTGAAATGACGACTCCTTATACAGCTCACTAG

Protein Analysis

802

Amino Acids

89.45

Weight (kDa)

6.01

Isoelectric Point (pI)

32.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 1 - 343 3.3e-75 Receptor family ligand binding region
Peripla_BP_6 PF13458 1 - 342 5.6e-19 Periplasmic binding protein
Lig_chan PF00060 504 - 707 3.9e-14 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000051)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G24710 AT2G24710 AT2G24710 AT2G24720 AT2G29100 AT2G29100 AT2G29110 AT2G29110 AT2G29120 AT5G27100
fragaria_vesca FvH4_2g11260 FvH4_2g11280 FvH4_2g11310 FvH4_2g11310 FvH4_2g11331 FvH4_2g11331 FvH4_2g11340 FvH4_2g11340 FvH4_2g11340 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g11350 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31980 FvH4_2g31990 FvH4_2g37140 FvH4_2g37150 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37160 FvH4_2g37161 FvH4_2g37161 FvH4_2g37163 FvH4_2g37163 FvH4_2g37170 FvH4_2g37181 FvH4_2g37191 FvH4_3g22781 FvH4_3g22781 FvH4_3g22781 FvH4_3g22790 FvH4_3g22790 FvH4_3g22810 FvH4_5g13460 FvH4_5g34751 FvH4_7g09130 FvH4_7g27991 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010 FvH4_7g28010
malus_domestica MD08G1047600.v1.1 MD08G1047700.v1.1 MD08G1048100.v1.1 MD08G1048200.v1.1 MD08G1048300.v1.1 MD08G1048500.v1.1 MD08G1048600.v1.1 MD08G1048700.v1.1 MD08G1048900.v1.1 MD08G1049000.v1.1 MD14G1064700.v1.1 MD15G1045900.v1.1 MD15G1046000.v1.1 MD15G1046200.v1.1 MD15G1046400.v1.1 MD15G1059200.v1.1 MD15G1059500.v1.1 MD15G1059600.v1.1 MD15G1059700.v1.1
prunus_persica Prupe.1G399500_v2.0.a1 Prupe.1G399600_v2.0.a1 Prupe.1G399700_v2.0.a1 Prupe.1G399800_v2.0.a1 Prupe.1G399900_v2.0.a1 Prupe.1G400000_v2.0.a1 Prupe.1G400300_v2.0.a1 Prupe.1G400400_v2.0.a1 Prupe.1G400500_v2.0.a1 Prupe.1G400600_v2.0.a1 Prupe.1G400700_v2.0.a1 Prupe.1G412700_v2.0.a1 Prupe.1G412800_v2.0.a1
pyrus_communis pycom02g01350 pycom08g04020 pycom08g04040 pycom08g04080 pycom08g04090 pycom08g04100 pycom14g05240 pycom15g04300 pycom15g04310 pycom15g04330 pycom15g04340 pycom15g04380 pycom15g05560 pycom15g05570 pycom15g05580 pycom15g05600
rosa_chinensis RchiOBHm_Chr1g0345071 RchiOBHm_Chr1g0345081 RchiOBHm_Chr1g0345171 RchiOBHm_Chr3g0480811 RchiOBHm_Chr3g0492581 RchiOBHm_Chr5g0020871 RchiOBHm_Chr5g0039801 RchiOBHm_Chr5g0039811 RchiOBHm_Chr5g0039861 RchiOBHm_Chr5g0039911 RchiOBHm_Chr5g0039941 RchiOBHm_Chr5g0039951 RchiOBHm_Chr5g0040011 RchiOBHm_Chr6g0269601 RchiOBHm_Chr6g0269621 RchiOBHm_Chr6g0269631 RchiOBHm_Chr6g0269641 RchiOBHm_Chr6g0269671 RchiOBHm_Chr6g0269681 RchiOBHm_Chr6g0269731 RchiOBHm_Chr6g0269751 RchiOBHm_Chr6g0269761 RchiOBHm_Chr6g0269771 RchiOBHm_Chr6g0269781 RchiOBHm_Chr6g0269861 RchiOBHm_Chr6g0269871 RchiOBHm_Chr6g0269881 RchiOBHm_Chr6g0269911 RchiOBHm_Chr6g0269921 RchiOBHm_Chr6g0269941 RchiOBHm_Chr6g0269951 RchiOBHm_Chr6g0304511 RchiOBHm_Chr6g0304621 RchiOBHm_Chr6g0304641 RchiOBHm_Chr6g0304651 RchiOBHm_Chr6g0304661 RchiOBHm_Chr6g0310781 RchiOBHm_Chr6g0310801 RchiOBHm_Chr6g0310811 RchiOBHm_Chr6g0310821 RchiOBHm_Chr6g0310831 RchiOBHm_Chr7g0183621 RchiOBHm_Chr7g0183651
rosa_laevigata RLG00000005035 RLG00000005036 RLG00000010458 RLG00000010459 RLG00000010460 RLG00000010961 RLG00000010962 RLG00000010963 RLG00000010964 RLG00000010966 RLG00000010970 RLG00000013824 RLG00000013825 RLG00000013826 RLG00000013828 RLG00000013829 RLG00000013831 RLG00000013833 RLG00000013835 RLG00000013837 RLG00000013840 RLG00000013842 RLG00000013844 RLG00000022758 RLG00000023449 RLG00000026705 RLG00000028849 RLG00000028853 RLG00000028854 RLG00000032569 RLG00000033944 RLG00000033945 RLG00000033947 RLG00000033949 RLG00000033951 RLG00000034239
rosa_multiflora Rmu_co8287891.1_g000001 Rmu_co8428745.1_g000001 Rmu_co8521767.1_g000002 Rmu_sc0000103.1_g000022 Rmu_sc0000103.1_g000031 Rmu_sc0000103.1_g000041 Rmu_sc0000103.1_g000053 Rmu_sc0000247.1_g000028 Rmu_sc0000247.1_g000051 Rmu_sc0000893.1_g000003 Rmu_sc0000893.1_g000017 Rmu_sc0001143.1_g000008 Rmu_sc0001143.1_g000019 Rmu_sc0001143.1_g000023 Rmu_sc0001975.1_g000003 Rmu_sc0001975.1_g000004 Rmu_sc0001975.1_g000005 Rmu_sc0001975.1_g000012 Rmu_sc0002151.1_g000006 Rmu_sc0003610.1_g000021 Rmu_sc0003682.1_g000001 Rmu_sc0003863.1_g000004 Rmu_sc0003863.1_g000007 Rmu_sc0003863.1_g000013 Rmu_sc0004196.1_g000005 Rmu_sc0004515.1_g000013 Rmu_sc0004515.1_g000024 Rmu_sc0004688.1_g000001 Rmu_sc0004688.1_g000003 Rmu_sc0004688.1_g000004 Rmu_sc0004748.1_g000006 Rmu_sc0004838.1_g000016 Rmu_sc0004838.1_g000017 Rmu_sc0005532.1_g000006 Rmu_sc0005532.1_g000011 Rmu_sc0005950.1_g000004 Rmu_sc0006576.1_g000005 Rmu_sc0006576.1_g000021 Rmu_sc0008520.1_g000002 Rmu_sc0008520.1_g000004 Rmu_sc0009130.1_g000002 Rmu_sc0018719.1_g000001 Rmu_sc0027713.1_g000005 Rmu_sc0040804.1_g000001 Rmu_ssc0000218.1_g000059 Rmu_ssc0000218.1_g000062 Rmu_ssc0000218.1_g000068 Rmu_ssc0000395.1_g000008 Rmu_ssc0000395.1_g000009 Rmu_ssc0000395.1_g000010 Rmu_ssc0000395.1_g000011 Rmu_ssc0000395.1_g000013 Rmu_ssc0000395.1_g000014
rosa_roxburghii Rroxscaffold_1G00041270 Rroxscaffold_1G00041290 Rroxscaffold_1G00041300 Rroxscaffold_1G00041360 Rroxscaffold_1G00041380 Rroxscaffold_1G00057500 Rroxscaffold_3G00270350 Rroxscaffold_4G00283160 Rroxscaffold_4G00309210 Rroxscaffold_4G00309240 Rroxscaffold_4G00309260 Rroxscaffold_4G00309290 Rroxscaffold_4G00309360 Rroxscaffold_6G00392210 Rroxscaffold_6G00401030 Rroxscaffold_7G00158260 Rroxscaffold_7G00163620 Rroxscaffold_7G00163630 Rroxscaffold_7G00163650 Rroxscaffold_7G00163680 Rroxscaffold_7G00198270 Rroxscaffold_7G00198280 Rroxscaffold_7G00198330 Rroxscaffold_7G00198340 Rroxscaffold_7G00198360 Rroxscaffold_7G00198390 Rroxscaffold_7G00198410 Rroxscaffold_7G00198450 Rroxscaffold_7G00198460 Rroxscaffold_7G00198490 Rroxscaffold_7G00198500 Rroxscaffold_7G00198510 Rroxscaffold_7G00198530 Rroxscaffold_7G00198550 Rroxscaffold_7G00198600
rosa_rugosa Rorug01G0175900 Rorug01G0176200 Rorug03G0186700 Rorug03G0254500 Rorug05G0182700 Rorug05G0183000 Rorug05G0183000 Rorug06G0049000 Rorug06G0049500 Rorug06G0049600.1 Rorug06G0049700 Rorug06G0050000 Rorug06G0050000 Rorug06G0050100 Rorug06G0050300.1 Rorug06G0050400 Rorug06G0051100 Rorug06G0051200 Rorug06G0051300 Rorug06G0051500 Rorug06G0051600 Rorug06G0051700 Rorug06G0332600 Rorug06G0332700 Rorug06G0332700 Rorug06G0383100 Rorug06G0383200 Rorug06G0383300 Rorug06G0383400 Rorug06G0459100 Rorug06G0459200
rosa_samantha Rh1BG160400 Rh1BG160500 Rh1BG160700 Rh3DG263900 Rh3DG338400 Rh5CG164400 Rh5CG164500 Rh5CG305500 Rh5CG305900 Rh5CG306000 Rh5DG280800 Rh5DG281300 Rh6AG445300 Rh6AG497000 Rh6BG174700 Rh6BG457200 Rh6CG168900 Rh6CG169800 Rh6CG512700 Rh6CG512900 Rh6DG034100 Rh6DG160500 Rh6DG160800 Rh6DG160900 Rh6DG161100 Rh6DG161400 Rh6DG161800 Rh6DG162000 Rh6DG162100 Rh6DG162200 Rh6DG444800 Rh6DG445000 Rh6DG445100 Rh6DG445200 Rh6DG445300 Rh6DG499100 Rh6DG499200 Rh6DG499300 Rh6DG499400 Rh6DG499500 Rh6DG499700 Rh7BG059800 Rh7BG060000 Rh7BG258500 Rh7BG258700
rosa_wichuraiana Rw0G006180 Rw0G007950 Rw0G018490 Rw0G022090 Rw1G015970 Rw1G015990 Rw3G021330 Rw5G025120 Rw5G025140 Rw5G025150 Rw5G025160 Rw5G025180 Rw5G025830 Rw5G025850 Rw6G014550 Rw6G014570 Rw6G014580 Rw6G014600 Rw6G014620 Rw6G014650 Rw6G014670 Rw6G038650 Rw6G038670 Rw6G038680 Rw6G038700 Rw6G038710 Rw6G038720 Rw6G043280 Rw6G043290 Rw7G004960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 888, 1380, 1455
Acc36I ACCTGC 1 cut(s) 2330
AccB1I GGYRCC 1 cut(s) 416
AccB7I CCANNNNNTGG 1 cut(s) 1175
AccI GTMKAC 1 cut(s) 2256
AccII CGCG 2 cut(s) 386, 1407
AciI CCGC 2 cut(s) 1407, 2346
AclI AACGTT 1 cut(s) 1960
AclWI GGATC 5 cut(s) 198, 1042, 1159, 1238, 1692
AcoI YGGCCR 2 cut(s) 1127, 1623
AcsI RAATTY 5 cut(s) 646, 1096, 1537, 2137, 2181
AcuI CTGAAG 1 cut(s) 2235
AcvI CACGTG 1 cut(s) 1084
AfaI GTAC 3 cut(s) 1789, 2123, 2313
AfiI CCNNNNNNNGG 2 cut(s) 1067, 1175
AflII CTTAAG 1 cut(s) 1775
AjiI CACGTC 1 cut(s) 156
AjnI CCWGG 1 cut(s) 1129
Alw21I GWGCWC 2 cut(s) 1089, 1813
Alw26I GTCTC 3 cut(s) 158, 907, 2334
Alw44I GTGCAC 1 cut(s) 1085
AlwI GGATC 5 cut(s) 198, 1042, 1159, 1238, 1692
Ama87I CYCGRG 1 cut(s) 185
AoxI GGCC 5 cut(s) 3, 1127, 1623, 2169, 2231
ApaLI GTGCAC 1 cut(s) 1085
ApoI RAATTY 5 cut(s) 646, 1096, 1537, 2137, 2181
AseI ATTAAT 1 cut(s) 1017
Asp700I GAANNNNTTC 1 cut(s) 1877
AspLEI GCGC 2 cut(s) 1370, 1504
AspS9I GGNCC 7 cut(s) 4, 146, 914, 1115, 1916, 2169, 2342
AsuHPI GGTGA 1 cut(s) 1050
AsuII TTCGAA 2 cut(s) 1817, 2267
AvaI CYCGRG 1 cut(s) 185
AvaII GGWCC 5 cut(s) 146, 914, 1115, 1916, 2342
BaeGI GKGCMC 4 cut(s) 207, 348, 421, 1089
BalI TGGCCA 1 cut(s) 1129
BanI GGYRCC 1 cut(s) 416
BauI CACGAG 1 cut(s) 1363
BbrPI CACGTG 1 cut(s) 1084
BbsI GAAGAC 1 cut(s) 1187
Bbv12I GWGCWC 2 cut(s) 1089, 1813
BccI CCATC 8 cut(s) 324, 356, 1152, 1352, 1570, 1634, 1799, 1928
BceAI ACGGC 3 cut(s) 385, 1311, 1638
BcgI CGANNNNNNTGC 1 cut(s) 36
BciT130I CCWGG 1 cut(s) 1131
BclI TGATCA 2 cut(s) 463, 2224
BcoDI GTCTC 3 cut(s) 158, 907, 2334
BfmI CTRYAG 1 cut(s) 430
BfoI RGCGCY 1 cut(s) 1371
BfrI CTTAAG 1 cut(s) 1775
BfuAI ACCTGC 1 cut(s) 2330
BmcAI AGTACT 2 cut(s) 1789, 2313
Bme1390I CCNGG 1 cut(s) 1131
Bme18I GGWCC 5 cut(s) 146, 914, 1115, 1916, 2342
BmeT110I CYCGRG 1 cut(s) 185
BmgBI CACGTC 1 cut(s) 156
BmgT120I GGNCC 7 cut(s) 4, 146, 914, 1115, 1916, 2169, 2342
BmiI GGNNCC 6 cut(s) 418, 1079, 1149, 1918, 2170, 2344
BmrFI CCNGG 1 cut(s) 1131
BmrI ACTGGG 1 cut(s) 1281
BmsI GCATC 3 cut(s) 464, 805, 1756
BmuI ACTGGG 1 cut(s) 1281
BpiI GAAGAC 1 cut(s) 1187
BpmI CTGGAG 4 cut(s) 984, 1643, 2028, 2319
Bpu14I TTCGAA 2 cut(s) 1817, 2267
BpuEI CTTGAG 3 cut(s) 276, 1241, 2316
BsaAI YACGTR 1 cut(s) 1084
BsaBI GATNNNNATC 1 cut(s) 1770
BsaI GGTCTC 1 cut(s) 2334
BsaJI CCNNGG 5 cut(s) 184, 564, 1143, 1247, 2352
BsaWI WCCGGW 1 cut(s) 1060
Bsc4I CCNNNNNNNGG 2 cut(s) 1067, 1175
Bse118I RCCGGY 1 cut(s) 1370
Bse1I ACTGG 5 cut(s) 54, 149, 1276, 1485, 2011
Bse3DI GCAATG 1 cut(s) 85
Bse8I GATNNNNATC 1 cut(s) 1770
BseBI CCWGG 1 cut(s) 1131
BseDI CCNNGG 5 cut(s) 184, 564, 1143, 1247, 2352
BseGI GGATG 6 cut(s) 335, 455, 657, 796, 1163, 1626
BseJI GATNNNNATC 1 cut(s) 1770
BseLI CCNNNNNNNGG 2 cut(s) 1067, 1175
BseMI GCAATG 1 cut(s) 85
BseNI ACTGG 5 cut(s) 54, 149, 1276, 1485, 2011
BseSI GKGCMC 4 cut(s) 207, 348, 421, 1089
BseYI CCCAGC 1 cut(s) 2201
BsgI GTGCAG 2 cut(s) 111, 228
Bsh1236I CGCG 2 cut(s) 386, 1407
BshFI GGCC 5 cut(s) 5, 1129, 1625, 2171, 2233
BshNI GGYRCC 1 cut(s) 416
BsiHKAI GWGCWC 2 cut(s) 1089, 1813
BsiHKCI CYCGRG 1 cut(s) 185
BsiSI CCGG 2 cut(s) 1061, 1371
BslFI GGGAC 5 cut(s) 1715, 1837, 2063, 2141, 2328
BslI CCNNNNNNNGG 2 cut(s) 1067, 1175
BsmAI GTCTC 3 cut(s) 158, 907, 2334
BsmFI GGGAC 5 cut(s) 1715, 1837, 2063, 2141, 2328
BsmI GAATGC 1 cut(s) 2284
BsnI GGCC 5 cut(s) 5, 1129, 1625, 2171, 2233
Bso31I GGTCTC 1 cut(s) 2334
BsoBI CYCGRG 1 cut(s) 185
Bsp119I TTCGAA 2 cut(s) 1817, 2267
Bsp1286I GDGCHC 5 cut(s) 207, 348, 421, 1089, 1813
Bsp143I GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
BspACI CCGC 2 cut(s) 1407, 2346
BspANI GGCC 5 cut(s) 5, 1129, 1625, 2171, 2233
BspFNI CGCG 2 cut(s) 386, 1407
BspHI TCATGA 1 cut(s) 114
BspLI GGNNCC 6 cut(s) 418, 1079, 1149, 1918, 2170, 2344
BspMI ACCTGC 1 cut(s) 2330
BspPI GGATC 5 cut(s) 198, 1042, 1159, 1238, 1692
BspQI GCTCTTC 3 cut(s) 39, 471, 1329
BspT104I TTCGAA 2 cut(s) 1817, 2267
BspT107I GGYRCC 1 cut(s) 416
BspTI CTTAAG 1 cut(s) 1775
BspTNI GGTCTC 1 cut(s) 2334
BsrDI GCAATG 1 cut(s) 85
BsrFI RCCGGY 1 cut(s) 1370
BsrI ACTGG 5 cut(s) 54, 149, 1276, 1485, 2011
BssAI RCCGGY 1 cut(s) 1370
BssECI CCNNGG 5 cut(s) 184, 564, 1143, 1247, 2352
BssMI GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
BssSI CACGAG 1 cut(s) 1363
BssT1I CCWWGG 2 cut(s) 564, 1247
Bst2BI CACGAG 1 cut(s) 1363
Bst2UI CCWGG 1 cut(s) 1131
Bst4CI ACNGT 7 cut(s) 558, 639, 747, 1317, 1648, 1669, 2222
Bst6I CTCTTC 4 cut(s) 39, 471, 1329, 1974
BstAFI CTTAAG 1 cut(s) 1775
BstBAI YACGTR 1 cut(s) 1084
BstBI TTCGAA 2 cut(s) 1817, 2267
BstC8I GCNNGC 2 cut(s) 135, 1718
BstDEI CTNAG 3 cut(s) 355, 1101, 1203
BstEII GGTNACC 1 cut(s) 1056
BstF5I GGATG 6 cut(s) 335, 455, 657, 796, 1163, 1626
BstFNI CGCG 2 cut(s) 386, 1407
BstH2I RGCGCY 1 cut(s) 1371
BstHHI GCGC 2 cut(s) 1370, 1504
BstKTI GATC 8 cut(s) 193, 466, 771, 1037, 1167, 1246, 1687, 2227
BstMAI GTCTC 3 cut(s) 158, 907, 2334
BstMBI GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
BstMWI GCNNNNNNNGC 7 cut(s) 29, 98, 101, 308, 815, 824, 2345
BstNI CCWGG 1 cut(s) 1131
BstPI GGTNACC 1 cut(s) 1056
BstSCI CCNGG 1 cut(s) 1129
BstSFI CTRYAG 1 cut(s) 430
BstSLI GKGCMC 4 cut(s) 207, 348, 421, 1089
BstUI CGCG 2 cut(s) 386, 1407
BstV2I GAAGAC 1 cut(s) 1187
BstX2I RGATCY 3 cut(s) 1164, 1243, 1684
BstXI CCANNNNNNTGG 1 cut(s) 1158
BstYI RGATCY 3 cut(s) 1164, 1243, 1684
BsuRI GGCC 5 cut(s) 5, 1129, 1625, 2171, 2233
BtgZI GCGATG 1 cut(s) 367
BtrI CACGTC 1 cut(s) 156
BtsCI GGATG 6 cut(s) 335, 455, 657, 796, 1163, 1626
BtsIMutI CAGTG 2 cut(s) 1269, 2227
BveI ACCTGC 1 cut(s) 2330
Cac8I GCNNGC 2 cut(s) 135, 1718
CciI TCATGA 1 cut(s) 114
CfoI GCGC 2 cut(s) 1370, 1504
Cfr10I RCCGGY 1 cut(s) 1370
Cfr13I GGNCC 7 cut(s) 4, 146, 914, 1115, 1916, 2169, 2342
Csp6I GTAC 3 cut(s) 1788, 2122, 2312
CviQI GTAC 3 cut(s) 1788, 2122, 2312
DdeI CTNAG 3 cut(s) 355, 1101, 1203
DpnI GATC 8 cut(s) 192, 465, 770, 1036, 1166, 1245, 1686, 2226
DpnII GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
DraI TTTAAA 1 cut(s) 1927
EaeI YGGCCR 2 cut(s) 1127, 1623
Eam1104I CTCTTC 4 cut(s) 39, 471, 1329, 1974
EarI CTCTTC 4 cut(s) 39, 471, 1329, 1974
Eco130I CCWWGG 2 cut(s) 564, 1247
Eco31I GGTCTC 1 cut(s) 2334
Eco47I GGWCC 5 cut(s) 146, 914, 1115, 1916, 2342
Eco57I CTGAAG 1 cut(s) 2235
Eco72I CACGTG 1 cut(s) 1084
Eco88I CYCGRG 1 cut(s) 185
Eco91I GGTNACC 1 cut(s) 1056
EcoO109I RGGNCCY 2 cut(s) 1115, 2342
EcoO65I GGTNACC 1 cut(s) 1056
EcoRI GAATTC 1 cut(s) 2137
EcoRII CCWGG 1 cut(s) 1129
EcoT14I CCWWGG 2 cut(s) 564, 1247
EcoT22I ATGCAT 1 cut(s) 672
ErhI CCWWGG 2 cut(s) 564, 1247
FaqI GGGAC 5 cut(s) 1715, 1837, 2063, 2141, 2328
FauI CCCGC 2 cut(s) 1400, 2353
FauNDI CATATG 2 cut(s) 1330, 2132
FbaI TGATCA 2 cut(s) 463, 2224
FblI GTMKAC 1 cut(s) 2256
FokI GGATG 6 cut(s) 342, 442, 644, 803, 1170, 1613
GlaI GCGC 2 cut(s) 1369, 1503
GsaI CCCAGC 1 cut(s) 2205
GsuI CTGGAG 4 cut(s) 984, 1643, 2028, 2319
HaeII RGCGCY 1 cut(s) 1371
HaeIII GGCC 5 cut(s) 5, 1129, 1625, 2171, 2233
HapII CCGG 2 cut(s) 1061, 1371
HhaI GCGC 2 cut(s) 1370, 1504
Hin6I GCGC 2 cut(s) 1368, 1502
HinP1I GCGC 2 cut(s) 1368, 1502
HincII GTYRAC 3 cut(s) 609, 939, 982
HindII GTYRAC 3 cut(s) 609, 939, 982
HindIII AAGCTT 1 cut(s) 1874
HinfI GANTC 4 cut(s) 378, 1136, 1569, 2386
HpaI GTTAAC 1 cut(s) 609
HpaII CCGG 2 cut(s) 1061, 1371
HphI GGTGA 1 cut(s) 1050
Hpy166II GTNNAC 8 cut(s) 523, 561, 609, 635, 939, 982, 1087, 2257
Hpy188I TCNGA 6 cut(s) 146, 252, 460, 1003, 1978, 2143
Hpy8I GTNNAC 8 cut(s) 523, 561, 609, 635, 939, 982, 1087, 2257
Hpy99I CGWCG 1 cut(s) 1712
HpyAV CCTTC 5 cut(s) 243, 583, 587, 713, 2318
HpyCH4III ACNGT 7 cut(s) 558, 639, 747, 1317, 1648, 1669, 2222
HpyCH4IV ACGT 6 cut(s) 155, 1083, 1184, 1634, 1707, 1960
HpyF10VI GCNNNNNNNGC 7 cut(s) 29, 98, 101, 308, 815, 824, 2345
HpyF3I CTNAG 3 cut(s) 355, 1101, 1203
HpySE526I ACGT 6 cut(s) 155, 1083, 1184, 1634, 1707, 1960
HspAI GCGC 2 cut(s) 1368, 1502
Ksp22I TGATCA 2 cut(s) 463, 2224
KspAI GTTAAC 1 cut(s) 609
Kzo9I GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
LguI GCTCTTC 3 cut(s) 39, 471, 1329
LmnI GCTCC 1 cut(s) 1808
LweI GCATC 3 cut(s) 464, 805, 1756
MaeII ACGT 6 cut(s) 155, 1083, 1184, 1634, 1707, 1960
MaeIII GTNAC 6 cut(s) 151, 1056, 1234, 1267, 1430, 2002
MalI GATC 8 cut(s) 192, 465, 770, 1036, 1166, 1245, 1686, 2226
MboI GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
MboII GAAGA 8 cut(s) 26, 488, 642, 1192, 1316, 1808, 1961, 2029
MfeI CAATTG 3 cut(s) 840, 2059, 2319
MflI RGATCY 3 cut(s) 1164, 1243, 1684
MhlI GDGCHC 5 cut(s) 207, 348, 421, 1089, 1813
MlsI TGGCCA 1 cut(s) 1129
MluNI TGGCCA 1 cut(s) 1129
MlyI GAGTC 1 cut(s) 2380
MmeI TCCRAC 3 cut(s) 724, 788, 1675
Mox20I TGGCCA 1 cut(s) 1129
Mph1103I ATGCAT 1 cut(s) 672
MroXI GAANNNNTTC 1 cut(s) 1877
MscI TGGCCA 1 cut(s) 1129
MslI CAYNNNNRTG 2 cut(s) 158, 2277
Msp20I TGGCCA 1 cut(s) 1129
MspCI CTTAAG 1 cut(s) 1775
MspI CCGG 2 cut(s) 1061, 1371
MspR9I CCNGG 1 cut(s) 1131
MunI CAATTG 3 cut(s) 840, 2059, 2319
Mva1269I GAATGC 1 cut(s) 2284
MvaI CCWGG 1 cut(s) 1131
MvnI CGCG 2 cut(s) 386, 1407
MwoI GCNNNNNNNGC 7 cut(s) 29, 98, 101, 308, 815, 824, 2345
NdeI CATATG 2 cut(s) 1330, 2132
NdeII GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
NlaIV GGNNCC 6 cut(s) 418, 1079, 1149, 1918, 2170, 2344
NmuCI GTSAC 6 cut(s) 151, 1056, 1234, 1267, 1430, 2002
NsiI ATGCAT 1 cut(s) 672
NspV TTCGAA 2 cut(s) 1817, 2267
PagI TCATGA 1 cut(s) 114
PciSI GCTCTTC 3 cut(s) 39, 471, 1329
PctI GAATGC 1 cut(s) 2284
PdmI GAANNNNTTC 1 cut(s) 1877
PfeI GAWTC 3 cut(s) 378, 1136, 1569
PflFI GACNNNGTC 1 cut(s) 1706
PflMI CCANNNNNTGG 1 cut(s) 1175
PleI GAGTC 1 cut(s) 2380
PmaCI CACGTG 1 cut(s) 1084
PmlI CACGTG 1 cut(s) 1084
PpsI GAGTC 1 cut(s) 2380
Ppu21I YACGTR 1 cut(s) 1084
PpuMI RGGWCCY 2 cut(s) 1115, 2342
PshBI ATTAAT 1 cut(s) 1017
PsiI TTATAA 3 cut(s) 888, 1380, 1455
Psp1406I AACGTT 1 cut(s) 1960
Psp5II RGGWCCY 2 cut(s) 1115, 2342
Psp6I CCWGG 1 cut(s) 1129
PspCI CACGTG 1 cut(s) 1084
PspEI GGTNACC 1 cut(s) 1056
PspFI CCCAGC 1 cut(s) 2201
PspGI CCWGG 1 cut(s) 1129
PspN4I GGNNCC 6 cut(s) 418, 1079, 1149, 1918, 2170, 2344
PspPI GGNCC 7 cut(s) 4, 146, 914, 1115, 1916, 2169, 2342
PspPPI RGGWCCY 2 cut(s) 1115, 2342
PsuI RGATCY 3 cut(s) 1164, 1243, 1684
PsyI GACNNNGTC 1 cut(s) 1706
RsaI GTAC 3 cut(s) 1789, 2123, 2313
RsaNI GTAC 3 cut(s) 1788, 2122, 2312
RseI CAYNNNNRTG 2 cut(s) 158, 2277
SapI GCTCTTC 3 cut(s) 39, 471, 1329
Sau3AI GATC 8 cut(s) 190, 463, 768, 1034, 1164, 1243, 1684, 2224
Sau96I GGNCC 7 cut(s) 4, 146, 914, 1115, 1916, 2169, 2342
ScaI AGTACT 2 cut(s) 1789, 2313
SchI GAGTC 1 cut(s) 2380
ScrFI CCNGG 1 cut(s) 1131
SduI GDGCHC 5 cut(s) 207, 348, 421, 1089, 1813
SfaNI GCATC 3 cut(s) 464, 805, 1756
SfcI CTRYAG 1 cut(s) 430
SfuI TTCGAA 2 cut(s) 1817, 2267
SinI GGWCC 5 cut(s) 146, 914, 1115, 1916, 2342
SmiMI CAYNNNNRTG 2 cut(s) 158, 2277
SmlI CTYRAG 4 cut(s) 291, 1220, 1775, 2331
SmoI CTYRAG 4 cut(s) 291, 1220, 1775, 2331
SsiI CCGC 2 cut(s) 1407, 2346
SspI AATATT 2 cut(s) 1311, 1509
StyD4I CCNGG 1 cut(s) 1129
StyI CCWWGG 2 cut(s) 564, 1247
TaaI ACNGT 7 cut(s) 558, 639, 747, 1317, 1648, 1669, 2222
TaiI ACGT 6 cut(s) 158, 1086, 1187, 1637, 1710, 1963
TaqI TCGA 4 cut(s) 71, 1817, 2031, 2267
TatI WGTACW 2 cut(s) 1787, 2311
TfiI GAWTC 3 cut(s) 378, 1136, 1569
TscAI CASTG 2 cut(s) 1276, 2227
TseFI GTSAC 6 cut(s) 151, 1056, 1234, 1267, 1430, 2002
Tsp45I GTSAC 6 cut(s) 151, 1056, 1234, 1267, 1430, 2002
TspGWI ACGGA 2 cut(s) 643, 999
TspRI CASTG 2 cut(s) 1276, 2227
Tth111I GACNNNGTC 1 cut(s) 1706
Van91I CCANNNNNTGG 1 cut(s) 1175
Vha464I CTTAAG 1 cut(s) 1775
VneI GTGCAC 1 cut(s) 1085
VpaK11BI GGWCC 5 cut(s) 146, 914, 1115, 1916, 2342
VspI ATTAAT 1 cut(s) 1017
XapI RAATTY 5 cut(s) 646, 1096, 1537, 2137, 2181
XcmI CCANNNNNNNNNTGG 1 cut(s) 668
XmiI GTMKAC 1 cut(s) 2256
XmnI GAANNNNTTC 1 cut(s) 1877
ZrmI AGTACT 2 cut(s) 1789, 2313
Zsp2I ATGCAT 1 cut(s) 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.